NO10G01570, NO10G01570 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO10G01570
Unique Name	NO10G01570
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2362
Alignment location	chr10:449839..452200 -

Link to JBrowse

Properties


Property Name	Value
Description	Gdh 6pgl endoplasmic bifunctional protein

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr10	genome	chr10:449839..452200 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
PRJNA769958	2024-08-13
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0050661	NADP binding
GO:0004345	glucose-6-phosphate dehydrogenase activity
GO:0003824	catalytic activity
GO:0000166	nucleotide binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006006	glucose metabolic process
GO:0055114	oxidation-reduction process
GO:0005975	carbohydrate metabolic process

Vocabulary: **INTERPRO**
Term	Definition
IPR036291	NAD(P)-bd_dom_sf
IPR022674	G6P_DH_NAD-bd
IPR022675	G6P_DH_C
IPR001282	G6P_DH

Homology

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BLAST of NO10G01570 vs. NCBI_GenBank
Match: EWM25449.1 (gdh 6pgl endoplasmic bifunctional protein [Nannochloropsis gaditana])

HSP 1 Score: 466.1 bits (1198), Expect = 1.600e-127
Identity = 241/338 (71.30%), Postives = 269/338 (79.59%), Query Frame = 0

Query:  249 MGKGVVQAILPFRQANRHWLEALWTGRHVASVEVSMKETEDCEGRTSFYEGYGVIRDVLQNHLTQVLVLLKMDI-PEGSSSSSSVYGSHQHRTAVLEELVFLGDMKSPDGEETHASIHVGQYEGYHAHVASDRRSKPLFVKTSVPTAASVTLASKHPRWEGARFTLKAGKALDTRTSYARVVLCDD-REGGRKEGRRCGCEMLFNIQGGEFGTAIVWNKTACAKLIDPEALQTPPGWVVEEEDKVEGGRGL----HVLRPKDGESNLPNAYENVVEAVLAGDRSMFLGTEELLHQWRVWDKVLTRADAMEPELYPAGYALDEVELTGFFGVRAEGGEE 581
            MGKGVVQAILPFR+ANR WLEALWTGRHV +VEVSMKETEDC+GRTSFYEGYGVIRDVLQNHLTQVLVLLKMDI P+  S+SS   GSH HRTAVL ELV  G+    +G E+ ASIHVGQY+GY  HVASDRRS+P  V+TSVPTAASVTLAS+HPRW G  FTLKAGKALD RTSYARVVLCD   EG  K G  C CE+LFNIQGG+FGTAI WN+TAC  +I+P A+ TPPGW+  E    EG  GL     VLRP  GE N PNAY+ VV AVL+GDRSMFL TEELLHQWRVWD VL++AD MEPELYP G+ALDEVE++G  G  +E  E+
Sbjct:    1 MGKGVVQAILPFRRANRGWLEALWTGRHVGAVEVSMKETEDCQGRTSFYEGYGVIRDVLQNHLTQVLVLLKMDIPPDKESTSSPSLGSHHHRTAVLRELVLGGE---TEGGESRASIHVGQYQGYLDHVASDRRSEPRVVRTSVPTAASVTLASRHPRWGGVSFTLKAGKALDERTSYARVVLCDGVPEGAAKAG--CACELLFNIQGGKFGTAIAWNRTACTGMIEPAAVVTPPGWLSVEN---EGENGLAADWQVLRPTAGE-NAPNAYDMVVAAVLSGDRSMFLDTEELLHQWRVWDNVLSKADTMEPELYPKGFALDEVEMSGLIGSVSEENED 329

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BLAST of NO10G01570 vs. NCBI_GenBank
Match: XP_005057914.1 (PREDICTED: GDH/6PGL endoplasmic bifunctional protein [Ficedula albicollis])

HSP 1 Score: 292.4 bits (747), Expect = 3.200e-75
Identity = 188/523 (35.95%), Postives = 263/523 (50.29%), Query Frame = 0

Query:   50 VDIVLVGATSSLAKKYLFQSFFRSYLEEELKPLGATLDYHFYGAATRPFEEGGKLLTDFLASSTSCKGVQNIDSTICEAMLKSFRKNFRYVQLRGEDHYKQLGRRLQQEQENGGQQLEGRLFYLSISPDLYGDIAKSIAEYVRPNATAAVGSESSSSQAAWVRVVFEKPFGRDLPSAEALAHDLAQHLEEEEIYRVDHYMGKGVVQAILPFRQANRHWLEALWTGRHVASVEVSMKETEDCEGRTSFYEGYGVIRDVLQNHLTQVLVLLKMDIPEGSSSSSSVYGSHQHRTAVLEELVFLGDMKSPDGEETHASIHVGQYEGYHAHVASDRRSKPLFVKTSVPTAASVTLASKHPRWEGARFTLKAGKALDTRTSYARVVLCD----DREGGRKEGRRCGC---EMLFNIQGGEFGTAIVWNKTACAKLIDPEALQTPPGWVVEEEDKVEGGRGLHVLRPKDGESNL------PNAYENVVEAVLAGDRSMFLGTEELLHQWRVWDKVLTRADAMEPELYPAG 560
            + ++L+GAT  LAKKYL+Q  F+ Y+++    + +   + F+GAA    E G +L+ D L    SC    +     C  +   F K  +Y QL+  ++Y  L R ++      G +  GR+FY S+ P  Y +IA+ I+   RP A             AW+RVV EKPFG DL SA+ LA  LA    EEE+YRVDHY+GK  V  ILPFR  NR +L+ +W   HV  VEV +KET D +GRTSFYE YGVIRDVLQNHLT+ L+ L M++P   SS+  V    QH+   L+ L  L            +S  +GQY+ Y + V  + +  P +V T+ PT A V + S  PRWEG  F L +GKALD R  YARV+  +     + G  +E     C   +++F    G  GT  V        L+     Q  P    +   + E    LH+      +  +       +AY  ++  +  G +  F+ TE LL  W  W  +L       P LYP G
Sbjct:   26 ISVILLGATGDLAKKYLWQGLFQLYMDQ----VSSGHSFTFHGAALAAQEPGQRLMFDVL-KKLSCP--PDEPPNRCAVLKDQFLKLSQYHQLKTAENYTALSREIESLLRQEGLKEAGRIFYFSVPPFAYTEIAQHISSSCRPPA------------GAWLRVVLEKPFGHDLESAQQLAAQLAGFFREEEMYRVDHYLGKQAVAHILPFRDQNRQFLDPIWNRHHVERVEVVLKETVDAKGRTSFYEQYGVIRDVLQNHLTEALLFLIMELPASVSSAQEVL---QHKLQALQSLWGL----------ERSSAVLGQYQAYDSQVQEELQEAPGYVSTT-PTFAGVLIHSDSPRWEGVPFLLTSGKALDERVGYARVLFKNRAYCPQSGTLREAGHSQCKPKQIIFYFGHGALGTPAV--------LVSRNLFQ--PAMPRDSWKEAEARSDLHIFGQPLSDFYMYSPVKERDAYSVLISNIYHGRKDFFITTENLLASWAFWTPLLDSTSRQPPRLYPGG 505

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BLAST of NO10G01570 vs. NCBI_GenBank
Match: XP_014741265.1 (PREDICTED: GDH/6PGL endoplasmic bifunctional protein [Sturnus vulgaris] >XP_014741266.1 PREDICTED: GDH/6PGL endoplasmic bifunctional protein [Sturnus vulgaris])

HSP 1 Score: 292.4 bits (747), Expect = 3.200e-75
Identity = 187/523 (35.76%), Postives = 264/523 (50.48%), Query Frame = 0

Query:   50 VDIVLVGATSSLAKKYLFQSFFRSYLEEELKPLGATLDYHFYGAATRPFEEGGKLLTDFLASSTSCKGVQNIDSTICEAMLKSFRKNFRYVQLRGEDHYKQLGRRLQQEQENGGQQLEGRLFYLSISPDLYGDIAKSIAEYVRPNATAAVGSESSSSQAAWVRVVFEKPFGRDLPSAEALAHDLAQHLEEEEIYRVDHYMGKGVVQAILPFRQANRHWLEALWTGRHVASVEVSMKETEDCEGRTSFYEGYGVIRDVLQNHLTQVLVLLKMDIPEGSSSSSSVYGSHQHRTAVLEELVFLGDMKSPDGEETHASIHVGQYEGYHAHVASDRRSKPLFVKTSVPTAASVTLASKHPRWEGARFTLKAGKALDTRTSYARVVLCD----DREGGRKEGRRCGC---EMLFNIQGGEFGTAIVWNKTACAKLIDPEALQTPPGWVVEEEDKVEGGRGLHVLRPKDGESNL------PNAYENVVEAVLAGDRSMFLGTEELLHQWRVWDKVLTRADAMEPELYPAG 560
            + +VL+GAT  LAKKYL+Q  F+ Y+++    + +   + F+GAA    E G +L+ D L    SC    +     C  +   F K  +Y QL+  ++Y  L R ++      G +  GR+FY S+ P  Y +IA+ I+   RP A             AW+RVV EKPFG DL SA+ LA  LA    EEE+YRVDHY+GK  V  ILPFR  NR +L+ +W   HV  VEV +KET D +GRTSFYE YGVIRDVLQNHLT+ L+ L M++P   SS+  V    QH+   L+ L+ L            +S  +GQY+ Y +HV  + +    +V T+ PT A V + S  PRWEG  F L +GKALD R  YARV+  +     + G  ++     C   +++F    G   T  V        L+     Q  P    +   + E    LH+      + ++       +AY  ++  +  G +  F+ TE LL  W  W  +L       P LYP G
Sbjct:   26 ISVVLLGATGDLAKKYLWQGLFQLYMDQ----VSSGHSFTFHGAALAALEPGQRLMFDVL-KKLSCP--PDEPPNRCAVLKDQFLKLSQYHQLKTAENYTALNREIETLVAQEGLKEAGRIFYFSVPPFAYTEIAQHISSSCRPPA------------GAWLRVVLEKPFGHDLESAQQLAAQLAGFFREEEMYRVDHYLGKQAVAHILPFRDQNRQFLDPIWNRHHVERVEVVLKETVDAKGRTSFYEEYGVIRDVLQNHLTEALIFLIMELPANVSSAQDVV---QHKLQALQSLLGL----------ERSSAVLGQYQAYDSHVQEELQEARGYVSTT-PTFAGVLIHSDSPRWEGVPFLLTSGKALDERVGYARVLFKNRAYCTQSGTLRDAGHSQCKPKQIIFYFGHGALSTPAV--------LVSRNLFQ--PVMPKDSWKEAEARSDLHIFGQPLSDFHMYSPVKERDAYSVLISNIYHGRKDFFITTENLLASWAFWTPLLASTSRQPPRLYPGG 505

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BLAST of NO10G01570 vs. NCBI_GenBank
Match: XP_019831803.1 (PREDICTED: SPRY domain-containing SOCS box protein 1 isoform X1 [Bos indicus])

HSP 1 Score: 290.8 bits (743), Expect = 9.400e-75
Identity = 194/523 (37.09%), Postives = 270/523 (51.63%), Query Frame = 0

Query:   50 VDIVLVGATSSLAKKYLFQSFFRSYLEEELKPLGATLDYHFYGAATRPFEEGGKLLTDFLASSTSCKGVQNIDSTICEAMLKSFRKNFRYVQLRGEDHYKQLGRRLQQEQENGGQQLEGRLFYLSISPDLYGDIAKSIAEYVRPNATAAVGSESSSSQAAWVRVVFEKPFGRDLPSAEALAHDLAQHLEEEEIYRVDHYMGKGVVQAILPFRQANRHWLEALWTGRHVASVEVSMKETEDCEGRTSFYEGYGVIRDVLQNHLTQVLVLLKMDIPEGSSSSSSVYGSHQHRTAVLEELVFLGDMKSPDGEETHASIHVGQYEGYHAHVASDRRSKPLFVKTSVPTAASVTLASKHPRWEGARFTLKAGKALDTRTSYARVV-------LCDDREGGRKEGRRCGCEMLFNIQGGEFGTAIVWNKTACAKLIDPEALQTPPGWVVEEEDKVEGGRGLHV--LRPKDGESNLP----NAYENVVEAVLAGDRSMFLGTEELLHQWRVWDKVLTRADAMEPELYPAG 560
            V I+L+GAT  LA+KYL+Q  F  YLEE    +G    + F+G A    E+G +++   L  S SC G  ++ S  C  +   F++   Y QL+  + Y  L + ++ + E+ G +  GR+FYLS+ P  Y DIA++I    RP               AW+RVV EKPFG DL SA+ LA +L    +EEE+YRVDHY+GK VV  ILPFR  NR  L+ LW   HV  VE+ MKET D EGRTSFYE YGVIRDVLQNHLT+VL L+ M++P   SS  SV    QH+    + L  L         + H+++ +GQY+ Y   V  + + KP    +  PT A + +   + RWEG  F L +GKALD R SY R++       +  ++     + R    +++F I  GE G+  V        L+     Q  P        +VEG  GLH+  L   D  +  P    +AY  ++  +    +  F+ TE LL  W  W  +L       P  YP G
Sbjct:   38 VSIILLGATGDLARKYLWQGLFHLYLEE----VGKGHHFRFHGTALTSTEQGQEVIAKVL-ESLSCPG--DMASGHCAELKAQFQQLSEYRQLKTPEDYLALSKDIEAQVEHEGLRETGRIFYLSVPPFAYVDIARNINSSCRP------------GPGAWLRVVLEKPFGHDLHSAQQLATELGSFFQEEEMYRVDHYLGKQVVAQILPFRDQNRAALDGLWNRHHVERVEIVMKETLDAEGRTSFYEEYGVIRDVLQNHLTEVLTLVAMELPVNVSSPESVL---QHKLQAFQALRSL---------QRHSAV-LGQYQAYSGQVRRELQ-KPDSFHSLTPTFAGILVHIDNLRWEGVPFILMSGKALDERVSYVRILFKNQAFCVQSEKHWVAAQSRCLPRQIIFYIGHGELGSPAV--------LVSRNLFQ--PALPSASWKEVEGRPGLHLFGLPLSDYYAYSPVREQDAYSLLISHIFHCRKDSFVTTENLLASWVFWTPLLDSLAHEVPRFYPGG 517

[Close]

BLAST of NO10G01570 vs. NCBI_GenBank
Match: XP_019831804.1 (PREDICTED: SPRY domain-containing SOCS box protein 1 isoform X2 [Bos indicus])

HSP 1 Score: 290.8 bits (743), Expect = 9.400e-75
Identity = 194/523 (37.09%), Postives = 270/523 (51.63%), Query Frame = 0

Query:   50 VDIVLVGATSSLAKKYLFQSFFRSYLEEELKPLGATLDYHFYGAATRPFEEGGKLLTDFLASSTSCKGVQNIDSTICEAMLKSFRKNFRYVQLRGEDHYKQLGRRLQQEQENGGQQLEGRLFYLSISPDLYGDIAKSIAEYVRPNATAAVGSESSSSQAAWVRVVFEKPFGRDLPSAEALAHDLAQHLEEEEIYRVDHYMGKGVVQAILPFRQANRHWLEALWTGRHVASVEVSMKETEDCEGRTSFYEGYGVIRDVLQNHLTQVLVLLKMDIPEGSSSSSSVYGSHQHRTAVLEELVFLGDMKSPDGEETHASIHVGQYEGYHAHVASDRRSKPLFVKTSVPTAASVTLASKHPRWEGARFTLKAGKALDTRTSYARVV-------LCDDREGGRKEGRRCGCEMLFNIQGGEFGTAIVWNKTACAKLIDPEALQTPPGWVVEEEDKVEGGRGLHV--LRPKDGESNLP----NAYENVVEAVLAGDRSMFLGTEELLHQWRVWDKVLTRADAMEPELYPAG 560
            V I+L+GAT  LA+KYL+Q  F  YLEE    +G    + F+G A    E+G +++   L  S SC G  ++ S  C  +   F++   Y QL+  + Y  L + ++ + E+ G +  GR+FYLS+ P  Y DIA++I    RP               AW+RVV EKPFG DL SA+ LA +L    +EEE+YRVDHY+GK VV  ILPFR  NR  L+ LW   HV  VE+ MKET D EGRTSFYE YGVIRDVLQNHLT+VL L+ M++P   SS  SV    QH+    + L  L         + H+++ +GQY+ Y   V  + + KP    +  PT A + +   + RWEG  F L +GKALD R SY R++       +  ++     + R    +++F I  GE G+  V        L+     Q  P        +VEG  GLH+  L   D  +  P    +AY  ++  +    +  F+ TE LL  W  W  +L       P  YP G
Sbjct:   31 VSIILLGATGDLARKYLWQGLFHLYLEE----VGKGHHFRFHGTALTSTEQGQEVIAKVL-ESLSCPG--DMASGHCAELKAQFQQLSEYRQLKTPEDYLALSKDIEAQVEHEGLRETGRIFYLSVPPFAYVDIARNINSSCRP------------GPGAWLRVVLEKPFGHDLHSAQQLATELGSFFQEEEMYRVDHYLGKQVVAQILPFRDQNRAALDGLWNRHHVERVEIVMKETLDAEGRTSFYEEYGVIRDVLQNHLTEVLTLVAMELPVNVSSPESVL---QHKLQAFQALRSL---------QRHSAV-LGQYQAYSGQVRRELQ-KPDSFHSLTPTFAGILVHIDNLRWEGVPFILMSGKALDERVSYVRILFKNQAFCVQSEKHWVAAQSRCLPRQIIFYIGHGELGSPAV--------LVSRNLFQ--PALPSASWKEVEGRPGLHLFGLPLSDYYAYSPVREQDAYSLLISHIFHCRKDSFVTTENLLASWVFWTPLLDSLAHEVPRFYPGG 510

[Close]

BLAST of NO10G01570 vs. NCBI_GenBank
Match: XP_005620549.1 (GDH/6PGL endoplasmic bifunctional protein isoform X1 [Canis lupus familiaris])

HSP 1 Score: 289.7 bits (740), Expect = 2.100e-74
Identity = 192/523 (36.71%), Postives = 270/523 (51.63%), Query Frame = 0

Query:   50 VDIVLVGATSSLAKKYLFQSFFRSYLEEELKPLGATLDYHFYGAATRPFEEGGKLLTDFLASSTSCKGVQNIDSTICEAMLKSFRKNFRYVQLRGEDHYKQLGRRLQQEQENGGQQLEGRLFYLSISPDLYGDIAKSIAEYVRPNATAAVGSESSSSQAAWVRVVFEKPFGRDLPSAEALAHDLAQHLEEEEIYRVDHYMGKGVVQAILPFRQANRHWLEALWTGRHVASVEVSMKETEDCEGRTSFYEGYGVIRDVLQNHLTQVLVLLKMDIPEGSSSSSSVYGSHQHRTAVLEELVFLGDMKSPDGEETHASIHVGQYEGYHAHVASDRRSKPLFVKTSVPTAASVTLASKHPRWEGARFTLKAGKALDTRTSYARVVLCDDREGGRKEGR----RCGC---EMLFNIQGGEFGTAIVWNKTACAKLIDPEALQTPPGWVVEEEDKVEGGRGLHVL-RP-KDGESNLP----NAYENVVEAVLAGDRSMFLGTEELLHQWRVWDKVLTRADAMEPELYPAG 560
            V I+L+GAT  LAKKYL+Q  F+ YL+E    +G    + F+GAA    ++G +L+   L  S SC   ++++   C  +   F++  +Y  L+  + Y  L + ++ + ++ G +  GR+FY S+ P  Y DIA+SI    RP               AW+RVV EKPFG D  SA+ LA +L    +EEE+YRVDHY+GK  V  ILPFR  NR  L+ LW   HV  VE+ MKET D EGRTSFYE YGVIRDVLQNHLT+VL L+ M++P   SSS +V    QH+    + L  L             S  +GQY+ Y   V  +++ KP    +  PT A + +   + RWEG  F L +GKALD R  Y R++  +     + E R    +  C   +++F I  GE G+  V        L+     +  P    +   +VEG  GLH+  RP  D     P    +AY  ++  +  G +  F+ TE LL  W  W  +L       P LYP G
Sbjct:   58 VSIILLGATGDLAKKYLWQGLFQLYLDE----VGKGYSFSFHGAALTSTKQGQELIAKVL-ESLSCP--EDMEPGRCAELKGQFQRLSQYRHLKTNEDYMALSKDIEAQLQHEGLREAGRIFYFSVPPFAYADIARSINSSCRP------------GPGAWLRVVLEKPFGHDYVSAQQLATELGSFFQEEEMYRVDHYLGKQAVAQILPFRDQNRKALDGLWNRHHVERVEIIMKETVDAEGRTSFYEEYGVIRDVLQNHLTEVLTLVAMELPYNISSSKAVL---QHKLQAFQALRGL----------QKGSAVLGQYQAYSRQVRREQQ-KPDSFYSLTPTFAGILVHVDNLRWEGVPFILMSGKALDERVGYIRILFRNQAYCAQNEKRWVVDQSQCLPRQIIFYIGHGELGSPAV--------LVSRNLFR--PSLPSKSWKEVEGRPGLHLFGRPISDYYVYSPVREQDAYSVLISHIFHGRKDSFITTENLLASWVFWTPLLDSLAHEVPRLYPGG 537

[Close]

BLAST of NO10G01570 vs. NCBI_GenBank
Match: XP_546762.3 (GDH/6PGL endoplasmic bifunctional protein isoform X2 [Canis lupus familiaris])

HSP 1 Score: 289.7 bits (740), Expect = 2.100e-74
Identity = 192/523 (36.71%), Postives = 270/523 (51.63%), Query Frame = 0

Query:   50 VDIVLVGATSSLAKKYLFQSFFRSYLEEELKPLGATLDYHFYGAATRPFEEGGKLLTDFLASSTSCKGVQNIDSTICEAMLKSFRKNFRYVQLRGEDHYKQLGRRLQQEQENGGQQLEGRLFYLSISPDLYGDIAKSIAEYVRPNATAAVGSESSSSQAAWVRVVFEKPFGRDLPSAEALAHDLAQHLEEEEIYRVDHYMGKGVVQAILPFRQANRHWLEALWTGRHVASVEVSMKETEDCEGRTSFYEGYGVIRDVLQNHLTQVLVLLKMDIPEGSSSSSSVYGSHQHRTAVLEELVFLGDMKSPDGEETHASIHVGQYEGYHAHVASDRRSKPLFVKTSVPTAASVTLASKHPRWEGARFTLKAGKALDTRTSYARVVLCDDREGGRKEGR----RCGC---EMLFNIQGGEFGTAIVWNKTACAKLIDPEALQTPPGWVVEEEDKVEGGRGLHVL-RP-KDGESNLP----NAYENVVEAVLAGDRSMFLGTEELLHQWRVWDKVLTRADAMEPELYPAG 560
            V I+L+GAT  LAKKYL+Q  F+ YL+E    +G    + F+GAA    ++G +L+   L  S SC   ++++   C  +   F++  +Y  L+  + Y  L + ++ + ++ G +  GR+FY S+ P  Y DIA+SI    RP               AW+RVV EKPFG D  SA+ LA +L    +EEE+YRVDHY+GK  V  ILPFR  NR  L+ LW   HV  VE+ MKET D EGRTSFYE YGVIRDVLQNHLT+VL L+ M++P   SSS +V    QH+    + L  L             S  +GQY+ Y   V  +++ KP    +  PT A + +   + RWEG  F L +GKALD R  Y R++  +     + E R    +  C   +++F I  GE G+  V        L+     +  P    +   +VEG  GLH+  RP  D     P    +AY  ++  +  G +  F+ TE LL  W  W  +L       P LYP G
Sbjct:   31 VSIILLGATGDLAKKYLWQGLFQLYLDE----VGKGYSFSFHGAALTSTKQGQELIAKVL-ESLSCP--EDMEPGRCAELKGQFQRLSQYRHLKTNEDYMALSKDIEAQLQHEGLREAGRIFYFSVPPFAYADIARSINSSCRP------------GPGAWLRVVLEKPFGHDYVSAQQLATELGSFFQEEEMYRVDHYLGKQAVAQILPFRDQNRKALDGLWNRHHVERVEIIMKETVDAEGRTSFYEEYGVIRDVLQNHLTEVLTLVAMELPYNISSSKAVL---QHKLQAFQALRGL----------QKGSAVLGQYQAYSRQVRREQQ-KPDSFYSLTPTFAGILVHVDNLRWEGVPFILMSGKALDERVGYIRILFRNQAYCAQNEKRWVVDQSQCLPRQIIFYIGHGELGSPAV--------LVSRNLFR--PSLPSKSWKEVEGRPGLHLFGRPISDYYVYSPVREQDAYSVLISHIFHGRKDSFITTENLLASWVFWTPLLDSLAHEVPRLYPGG 510

[Close]

BLAST of NO10G01570 vs. NCBI_GenBank
Match: XP_014430998.1 (PREDICTED: GDH/6PGL endoplasmic bifunctional protein [Pelodiscus sinensis] >XP_014430999.1 PREDICTED: GDH/6PGL endoplasmic bifunctional protein [Pelodiscus sinensis] >XP_014431000.1 PREDICTED: GDH/6PGL endoplasmic bifunctional protein [Pelodiscus sinensis])

HSP 1 Score: 289.7 bits (740), Expect = 2.100e-74
Identity = 193/535 (36.07%), Postives = 270/535 (50.47%), Query Frame = 0

Query:   50 VDIVLVGATSSLAKKYLFQSFFRSYLEEELKPLGATLDYHFYGAATRPFEEGGKLLTDFLASSTSCKGVQNIDSTICEAMLKSFRKNFRYVQLRGEDHYKQLGRRLQQEQENGGQQLEGRLFYLSISPDLYGDIAKSIAEYVRPNATAAVGSESSSSQAAWVRVVFEKPFGRDLPSAEALAHDLAQHLEEEEIYRVDHYMGKGVVQAILPFRQANRHWLEALWTGRHVASVEVSMKETEDCEGRTSFYEGYGVIRDVLQNHLTQVLVLLKMDIPEGSSSSSSVYGSHQHRTAVLEELVFLGDMKSPDGEETHASIHVGQYEGYHAHVASDRRSKPLFVKTSVPTAASVTLASKHPRWEGARFTLKAGKALDTRTSYARVVL-----CDDREGGRKEGR-RCGC-EMLFNIQGGEFGTAIVWNKTACAKLIDPEALQTPPGW--VVEEEDKVEGGRGL---HVLRPKDGESNLPNAYENVVEAVLAGDRSMFLGTEELLHQWRVWDKVLTRADAMEPELYPAGYA---LDEVELTG 570
            V +VL+GAT  LAKKYL+Q  F+ YLE+    + +   + F+GAA    E G + + + L    +C    ++    C  +   F K  RY QL+  ++Y  L R ++   +  G +  GR+FY S+ P  Y +IA+ I    RP               AW+RVV EKPFG D  SA+ LA +L     EEE+YRVDHY+GK  V  ILPFR  NR +L+ +W   HV  VE+ +KET D +GRTSFYE YGV+RDVLQNHLT+ L+ L M++P   SS+  +    +H+         L   KS  G E+ +++ +GQY+ Y + V  + + KP    T  PT A V +     RWEG  F L +GKALD R  Y RV+      C  RE  R+ GR +CG  +++F I  GE  +  V       K + PE       W  V +       G  L   +V  P         AY  ++ ++  G +  F+ TE LL  W  W  +L       P LYP G     L + E+TG
Sbjct:   26 VSVVLLGATGDLAKKYLWQGLFQLYLEQ----VSSGHSFTFHGAALTAHEPGQRQMFEVL-KKLACP--SDVSPDRCAVVKDQFLKLSRYYQLKTAENYTALNREIETLLQQEGLEEAGRIFYFSVPPFAYAEIARHINSSCRPR------------PGAWLRVVLEKPFGHDHKSAQQLAIELRTFFREEEMYRVDHYLGKQAVAHILPFRDQNRRFLDPIWNRHHVERVEIVLKETLDAKGRTSFYEQYGVLRDVLQNHLTEALLYLAMELPANVSSAEEIL---RHK---------LQTFKSLQGLESTSAV-LGQYQAYASQVREELQ-KPQDYVTMTPTFAGVLIQLDSLRWEGVPFILTSGKALDERVGYVRVLFKNRAYCTQRESWREAGRSQCGTKQIVFYIGHGELNSPAVLVSRNLFKPVMPEG-----SWKEVADHPQLHLFGHPLSDYYVYSPVQER----EAYSVLISSIFHGRKDSFITTENLLASWEFWTPLLESVTQRAPRLYPGGLENQHLLDFEMTG 518

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BLAST of NO10G01570 vs. NCBI_GenBank
Match: XP_005620552.1 (GDH/6PGL endoplasmic bifunctional protein isoform X3 [Canis lupus familiaris] >XP_005620554.1 GDH/6PGL endoplasmic bifunctional protein isoform X3 [Canis lupus familiaris] >XP_013969387.1 GDH/6PGL endoplasmic bifunctional protein isoform X3 [Canis lupus familiaris] >XP_022274734.1 GDH/6PGL endoplasmic bifunctional protein isoform X3 [Canis lupus familiaris] >XP_022274735.1 GDH/6PGL endoplasmic bifunctional protein isoform X3 [Canis lupus familiaris])

HSP 1 Score: 289.7 bits (740), Expect = 2.100e-74
Identity = 192/523 (36.71%), Postives = 270/523 (51.63%), Query Frame = 0

Query:   50 VDIVLVGATSSLAKKYLFQSFFRSYLEEELKPLGATLDYHFYGAATRPFEEGGKLLTDFLASSTSCKGVQNIDSTICEAMLKSFRKNFRYVQLRGEDHYKQLGRRLQQEQENGGQQLEGRLFYLSISPDLYGDIAKSIAEYVRPNATAAVGSESSSSQAAWVRVVFEKPFGRDLPSAEALAHDLAQHLEEEEIYRVDHYMGKGVVQAILPFRQANRHWLEALWTGRHVASVEVSMKETEDCEGRTSFYEGYGVIRDVLQNHLTQVLVLLKMDIPEGSSSSSSVYGSHQHRTAVLEELVFLGDMKSPDGEETHASIHVGQYEGYHAHVASDRRSKPLFVKTSVPTAASVTLASKHPRWEGARFTLKAGKALDTRTSYARVVLCDDREGGRKEGR----RCGC---EMLFNIQGGEFGTAIVWNKTACAKLIDPEALQTPPGWVVEEEDKVEGGRGLHVL-RP-KDGESNLP----NAYENVVEAVLAGDRSMFLGTEELLHQWRVWDKVLTRADAMEPELYPAG 560
            V I+L+GAT  LAKKYL+Q  F+ YL+E    +G    + F+GAA    ++G +L+   L  S SC   ++++   C  +   F++  +Y  L+  + Y  L + ++ + ++ G +  GR+FY S+ P  Y DIA+SI    RP               AW+RVV EKPFG D  SA+ LA +L    +EEE+YRVDHY+GK  V  ILPFR  NR  L+ LW   HV  VE+ MKET D EGRTSFYE YGVIRDVLQNHLT+VL L+ M++P   SSS +V    QH+    + L  L             S  +GQY+ Y   V  +++ KP    +  PT A + +   + RWEG  F L +GKALD R  Y R++  +     + E R    +  C   +++F I  GE G+  V        L+     +  P    +   +VEG  GLH+  RP  D     P    +AY  ++  +  G +  F+ TE LL  W  W  +L       P LYP G
Sbjct:   23 VSIILLGATGDLAKKYLWQGLFQLYLDE----VGKGYSFSFHGAALTSTKQGQELIAKVL-ESLSCP--EDMEPGRCAELKGQFQRLSQYRHLKTNEDYMALSKDIEAQLQHEGLREAGRIFYFSVPPFAYADIARSINSSCRP------------GPGAWLRVVLEKPFGHDYVSAQQLATELGSFFQEEEMYRVDHYLGKQAVAQILPFRDQNRKALDGLWNRHHVERVEIIMKETVDAEGRTSFYEEYGVIRDVLQNHLTEVLTLVAMELPYNISSSKAVL---QHKLQAFQALRGL----------QKGSAVLGQYQAYSRQVRREQQ-KPDSFYSLTPTFAGILVHVDNLRWEGVPFILMSGKALDERVGYIRILFRNQAYCAQNEKRWVVDQSQCLPRQIIFYIGHGELGSPAV--------LVSRNLFR--PSLPSKSWKEVEGRPGLHLFGRPISDYYVYSPVREQDAYSVLISHIFHGRKDSFITTENLLASWVFWTPLLDSLAHEVPRLYPGG 502

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BLAST of NO10G01570 vs. NCBI_GenBank
Match: XP_022370451.1 (GDH/6PGL endoplasmic bifunctional protein isoform X2 [Enhydra lutris kenyoni])

HSP 1 Score: 289.7 bits (740), Expect = 2.100e-74
Identity = 196/536 (36.57%), Postives = 276/536 (51.49%), Query Frame = 0

Query:   50 VDIVLVGATSSLAKKYLFQSFFRSYLEEELKPLGATLDYHFYGAATRPFEEGGKLLTDFLASSTSCKGVQNIDSTICEAMLKSFRKNFRYVQLRGEDHYKQLGRRLQQEQENGGQQLEGRLFYLSISPDLYGDIAKSIAEYVRPNATAAVGSESSSSQAAWVRVVFEKPFGRDLPSAEALAHDLAQHLEEEEIYRVDHYMGKGVVQAILPFRQANRHWLEALWTGRHVASVEVSMKETEDCEGRTSFYEGYGVIRDVLQNHLTQVLVLLKMDIPEGSSSSSSVYGSHQHRTAVLEELVFLGDMKSPDGEETHASIHVGQYEGYHAHVASDRRSKPLFVKTSVPTAASVTLASKHPRWEGARFTLKAGKALDTRTSYARVVLCDDREGGRKEGR----RCGC---EMLFNIQGGEFGTAIVWNKTACAKLIDPEALQTPPGWVVEEEDKVEGGRGLHVL-RP-KDGESNLP----NAYENVVEAVLAGDRSMFLGTEELLHQWRVWDKVLTRADAMEPELYPAGYA---LDEVELTG 570
            V I+L+GAT  LA+KYL+Q  F+ YL+E    +G    + F+GAA    ++G + +T  L  S SC   +++    C  +   F++  +Y +LR  + Y  L + ++ + ++ G +  GR+FY S+ P  Y DIA+S+    RP               AW+RVV EKPFG D  SA+ LA +L    +EEE+YRVDHY+GK  V  ILPFR  NR  L+ LW   HV  VE+ MKET D EGRTSFYE YGVIRDVLQNHLT+VL L+ M++P   SSS +V    QH+    + L  L             S  +GQY+ Y   V  +++ KP    +  PT A + +   + RWEG  F L +GKALD R  Y R++  +     + E R    +  C   +++F I  GE G+  V        L+     +  P    E   +VEG  GL +  RP  D  +  P    +AY  ++  +  G +  F+ TE LL  W  W  +L       P LYP G A   L + E TG
Sbjct:   31 VSIILLGATGDLARKYLWQGLFQLYLDE----VGKGYSFSFHGAALTSTKQGQEFVTKVL-ESLSCP--EDVAPERCAELRGRFQQLSQYRRLRTSEDYMALSKDIEAQLQHEGLREAGRIFYFSVPPFAYADIARSMNSSCRP------------GPGAWLRVVLEKPFGHDRLSAQQLATELRSFFQEEEMYRVDHYLGKQAVAQILPFRDQNRKALDGLWNRHHVERVEIIMKETVDAEGRTSFYEEYGVIRDVLQNHLTEVLSLVAMELPYNVSSSGAVL---QHKLQAFQALRGL----------HKDSAVLGQYQAYSGQVRQEQQ-KPDSFHSLTPTFAGILVHMDNLRWEGVPFILMSGKALDERVGYVRILFRNQAYCAQTEARWVADQSQCLPRQIVFYIGHGELGSPAV--------LVSRNLFR--PSLPSESWKEVEGRPGLRLFGRPLSDFYAYSPVREQDAYSVLISHIFHGRKDSFITTENLLASWAFWTPLLDSLAYEAPRLYPGGAANGHLLDFEFTG 523

The following BLAST results are available for this feature:

BLAST of NO10G01570 vs. NCBI_GenBank

BLAST of NO10G01570 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM25449.1	1.600e-127	71.30	gdh 6pgl endoplasmic bifunctional protein [Nannoch...	[more]
XP_005057914.1	3.200e-75	35.95	PREDICTED: GDH/6PGL endoplasmic bifunctional prote...	[more]
XP_014741265.1	3.200e-75	35.76	PREDICTED: GDH/6PGL endoplasmic bifunctional prote...	[more]
XP_019831803.1	9.400e-75	37.09	PREDICTED: SPRY domain-containing SOCS box protein...	[more]
XP_019831804.1	9.400e-75	37.09	PREDICTED: SPRY domain-containing SOCS box protein...	[more]
XP_005620549.1	2.100e-74	36.71	GDH/6PGL endoplasmic bifunctional protein isoform ...	[more]
XP_546762.3	2.100e-74	36.71	GDH/6PGL endoplasmic bifunctional protein isoform ...	[more]
XP_014430998.1	2.100e-74	36.07	PREDICTED: GDH/6PGL endoplasmic bifunctional prote...	[more]
XP_005620552.1	2.100e-74	36.71	GDH/6PGL endoplasmic bifunctional protein isoform ...	[more]
XP_022370451.1	2.100e-74	36.57	GDH/6PGL endoplasmic bifunctional protein isoform ...	[more]

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Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL052	nonsL052	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR004	ncniR004	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR015	ngnoR015	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK001029	NSK001029	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO10G01570.1	NO10G01570.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|554298	gene_4059	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100005g94	gene5121	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO10G01570.1	NO10G01570.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO10G01570 ID=NO10G01570|Name=NO10G01570|organism=Nannochloropsis oceanica|type=gene|length=2362bp
CGCCGAAGCGCCGAAGCAAATGAAAACGGGCGCCCGATGTGTTGGTAAGC
CTCGTCACGACGTGCGGGCGTGATCACGAAGAAGTGCTGTGGTTGTTGAG
TTGCCAACTCGTGTCATAAATAGGGATGTGATTATATCCATACAAGGGTA
TGAGATAAAATTACGAATGAAAAAAAGAACAGTGCTCTGACTCTGCCAAT
CGCTCATGCGCTTGCTTGTGCAGTGGGTACAAGATAAAGCCCATTCCACC
TTGCTTCCCTATCCCTTCACCCACTACTCGCATACCCGACATACTGCGCA
ACACAATTACAGACCACGCAATGAAGAAGAAAGTCGACAGCAGCCGCAGG
CGGGCCTTGCCACTCTTCTTGCTAGCGCTGCTCATCTTGCTTCTCCCCTC
CCTCGCCTCCCCCATCCTCTACGCCAAGCAGCGCACCGAGCCCTCCTCCT
CCTCATCGCGTCGACGGGTGGACATTGTACTGGTCGGCGCCACGTCGAGC
CTAGCCAAGAAGTACCTCTTCCAGAGTTTTTTCCGTTCGTACCTAGAAGA
GGAGCTCAAACCCTTGGGCGCCACGCTAGACTACCACTTCTATGGAGCCG
CTACACGCCCGTTTGAGGAAGGAGGCAAGCTCCTCACTGACTTTCTCGCC
TCCTCAACCTCGTGCAAAGGTGTCCAAAACATCGATTCAACCATTTGCGA
AGCCATGCTCAAGTCCTTCCGGAAAAACTTCCGGTACGTGCAACTGCGAG
GGGAGGACCACTACAAGCAGCTCGGGCGACGGCTGCAGCAAGAGCAAGAG
AATGGAGGGCAGCAATTGGAAGGCCGGCTGTTTTACCTGAGTATCTCTCC
GGACCTATACGGGGATATTGCAAAGTCAATTGCTGAGTACGTGCGACCGA
ATGCAACGGCTGCAGTAGGGAGTGAGAGCAGCAGCAGCCAGGCGGCATGG
GTGCGGGTCGTGTTTGAGAAGCCCTTCGGACGTgtgagttttgttttgaa
gaatggggagtgaaaaggatgggacgaagttataagtccacggaacagga
tgattccaacgcgtatgagtgaattgaattttgtttgaaaataaatgcgt
ttgtcttttgatgctccaccactctcactctctcccgctgccctccctca
gGACCTGCCCTCCGCCGAGGCGCTCGCACACGATTTGGCGCAACATCTTG
AAGAAGAAGAAATTTACCGGGTGGACCACTACATGGGCAAGGGCGTGGTG
CAAGCCATTTTGCCCTTCCGCCAAGCGAACAGACACTGGCTGGAGGCCCT
GTGGACCGGGAGGCATGTTGCATCTGTGGAGGTATCCATGAAAGAGACTG
AAGACTGCGAAGGTCGCACATCCTTCTACGAAGGATACGGGGTCATCCGC
GATGTTCTTCAGAACCACCTTACCCAAGTCTTGGTCCTCTTGAAAATGGA
CATACCTGAGGGCTCCTCCTCGTCTTCCTCTGTCTATGGCTCCCACCAAC
ACCGGACGGCCGTGCTTGAAGAGCTAGTCTTCCTCGGAGACATGAAGTCA
CCGGATGGAGAGGAAACGCATGCCAGCATCCACGTTGGTCAATACGAAGG
GTACCATGCCCATGTTGCGTCCGACCGCCGATCCAAGCCGCTGTTTGTCA
AGACGTCTGTTCCCACTGCTGCTTCGGTGACACTTGCCTCGAAGCATCCT
CGTTGGGAAGGGGCTCGATTCACACTTAAAGCGGGTAAAGCCTTGGATAC
CCGGACAAGCTATGCGAGGGTGGTGTTGTGTGATGATAGGGAGGGAGGGA
GAAAGGAAGGGAGGAGGTGTGGCTGTGAGATGTTGTTCAATATTCAGGGA
GGGGAGTTTGGCACGGCGATTGTTTGGAATAAGACGGCGTGTGCGAAATT
GATCGATCCAGAAGCATTGCAGACGCCACCGGGATGGGTGGTAGAGGAAG
AGGATAAGGTGGAGGGAGGGAGGGGTTTGCACGTGTTGAGGCCGAAGGAC
GGGGAGAGTAATCTTCCGAATGCATATGAAAATGTTGTGGAAGCAGTGCT
GGCGGGAGACAGGTCGATGTTCTTGGGCACCGAGGAGTTGTTGCACCAGT
GGCGGGTGTGGGATAAGGTGTTGACGAGGGCAGATGCGATGGAACCTGAG
CTGTATCCCGCGGGTTATGCGTTGGATGAGGTGGAGCTGACTGGGTTTTT
TGGGGTGAGGGCGGAGGGAGGGGAGGAGGAAGAAAAGCGGGAAGAGTTGT
AAAAAACAGGATGGGAATGAAAAATAAAAAGCACCAAGAAAGGGAGAGAA
AACTGTACCATAGCAAAACAAGAAAGATAAGCAAGCAAATATAACCAATA
GCCTCCTCTCCG

protein sequence of NO10G01570.1

>NO10G01570.1-protein ID=NO10G01570.1-protein|Name=NO10G01570.1|organism=Nannochloropsis oceanica|type=polypeptide|length=588bp
MKKKVDSSRRRALPLFLLALLILLLPSLASPILYAKQRTEPSSSSSRRRV
DIVLVGATSSLAKKYLFQSFFRSYLEEELKPLGATLDYHFYGAATRPFEE
GGKLLTDFLASSTSCKGVQNIDSTICEAMLKSFRKNFRYVQLRGEDHYKQ
LGRRLQQEQENGGQQLEGRLFYLSISPDLYGDIAKSIAEYVRPNATAAVG
SESSSSQAAWVRVVFEKPFGRDLPSAEALAHDLAQHLEEEEIYRVDHYMG
KGVVQAILPFRQANRHWLEALWTGRHVASVEVSMKETEDCEGRTSFYEGY
GVIRDVLQNHLTQVLVLLKMDIPEGSSSSSSVYGSHQHRTAVLEELVFLG
DMKSPDGEETHASIHVGQYEGYHAHVASDRRSKPLFVKTSVPTAASVTLA
SKHPRWEGARFTLKAGKALDTRTSYARVVLCDDREGGRKEGRRCGCEMLF
NIQGGEFGTAIVWNKTACAKLIDPEALQTPPGWVVEEEDKVEGGRGLHVL
RPKDGESNLPNAYENVVEAVLAGDRSMFLGTEELLHQWRVWDKVLTRADA
MEPELYPAGYALDEVELTGFFGVRAEGGEEEEKREEL*

Synonyms

Publications