NO10G01510, NO10G01510 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO10G01510 vs. NCBI_GenBank
Match: EWM25359.1 (light-harvesting protein [Nannochloropsis gaditana]) HSP 1 Score: 345.9 bits (886), Expect = 1.300e-91 Identity = 246/294 (83.67%), Postives = 254/294 (86.39%), Query Frame = 0 Query: 1 MKTSLVTLALAAVPASAFMGGFMGKNFAAPTKASPATPTTMFLNFGKKGGVSVPKPAGKAAPAKVTPKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLSNPDFAGGLIGSDVEAIRFDPWNLAAERDPEGLAWYRSAELKHGRICMLAALGLFVQSAFHLPDDVFSNPKGLDALFQVSAERPQAIAQILIAIGAIEVAGLAANEGKAPGDFGFDPLNLAPKTEDAFNELQLKEIKNGRLAMVSVAGMLIQEALTNQGVLEQIN 295 MKTSLVTLALA VPA+AFMGGFMGKNFAAP K + T TTMFLNFG K PA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXX DFAGGLIGSDVEAIRFDPWNLA+ERDPEGLAWYRSAELKHGRICMLAALGL VQS++HLPD+VFSN KGLDALFQVSAERPQAIAQILIAIGAIEVAGLAA+EGKAPGDFGFDPLNL PKTE+AFNELQLKEIKNGRLAMV VAGMLIQE LTNQGVLEQIN Sbjct: 13 MKTSLVTLALATVPATAFMGGFMGKNFAAPAKVASTTTTTMFLNFGSKKAA----PAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFAGGLIGSDVEAIRFDPWNLASERDPEGLAWYRSAELKHGRICMLAALGLLVQSSYHLPDEVFSNSKGLDALFQVSAERPQAIAQILIAIGAIEVAGLAASEGKAPGDFGFDPLNLKPKTEEAFNELQLKEIKNGRLAMVGVAGMLIQETLTNQGVLEQIN 302
BLAST of NO10G01510 vs. NCBI_GenBank
Match: CEM00977.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 218.8 bits (556), Expect = 2.400e-53 Identity = 113/181 (62.43%), Postives = 134/181 (74.03%), Query Frame = 0 Query: 136 GGLIGSDVEAIRFDPWNLAA-ERDPEGLAWYRSAELKHGRICMLAALGLFVQSAFHLPD--DVFSNPKGLDALFQVSAERPQAIAQILIAIGAIEVAGLAANEGKAPGDFGFDPLNLAPK-----TEDAFNELQLKEIKNGRLAMVSVAGMLIQEALTNQGVLEQINSGHLSPFNDGQGAF 309 GGL+GSD+EA FDPW LAA + +PE L+WYR+AELKHGRICMLAALGL Q LPD VFS KG+ AL +V+ ERP AI Q+L+AIGAIEVA L + APGD GFDPLNL K +AF ++QL+E+KNGRLAMV+ AGMLIQ+ LT Q LEQ+ SGH+SPF DGQG F Sbjct: 49 GGLVGSDIEAPNFDPWKLAAGDLEPETLSWYRAAELKHGRICMLAALGLTTQEVVQLPDPSGVFSETKGIPALVKVANERPGAIIQLLLAIGAIEVAALNRADSAAPGDLGFDPLNLQQKLGLASNPEAFEKMQLRELKNGRLAMVATAGMLIQQFLTGQATLEQLLSGHISPFGDGQGVF 229
BLAST of NO10G01510 vs. NCBI_GenBank
Match: XP_005852776.1 (light-harvesting protein [Nannochloropsis gaditana CCMP526] >EKU23058.1 light-harvesting protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 205.7 bits (522), Expect = 2.100e-49 Identity = 99/172 (57.56%), Postives = 123/172 (71.51%), Query Frame = 0 Query: 137 GLIGSDVEAIRFDPWNLAAERDPEGLAWYRSAELKHGRICMLAALGLFVQSAFHLPDDVFSNPKGLDALFQVSAERPQAIAQILIAIGAIEVAGLAANEGKAPGDFGFDPLNLAPKTEDAFNELQLKEIKNGRLAMVSVAGMLIQEALTNQGVLEQINSGHLSPFNDGQGAF 309 G++GSDVE FDP LA +D E L WYR+AELKHGR+CMLA++G VQ +HLPD F K +DAL +VS+ERP A QI IAI A+EV G + + APGD FDPL L P+ + ELQLKE+KNGRLAM++ AG+ QE +T QG +EQ+ SGH+SPF DGQGAF Sbjct: 42 GIVGSDVEVPEFDPLGLAKNKDEETLGWYRAAELKHGRVCMLASVGYLVQGLYHLPDGPFEASKPIDALLKVSSERPLAAVQIAIAIAALEVLGASIQKYTAPGDLTFDPLGLKPEDPEELAELQLKELKNGRLAMLATAGLAAQEYVTGQGPVEQLLSGHISPFGDGQGAF 213
BLAST of NO10G01510 vs. NCBI_GenBank
Match: EWM21948.1 (fucoxanthin chlorophyll a c binding protein [Nannochloropsis gaditana]) HSP 1 Score: 205.7 bits (522), Expect = 2.100e-49 Identity = 99/172 (57.56%), Postives = 123/172 (71.51%), Query Frame = 0 Query: 137 GLIGSDVEAIRFDPWNLAAERDPEGLAWYRSAELKHGRICMLAALGLFVQSAFHLPDDVFSNPKGLDALFQVSAERPQAIAQILIAIGAIEVAGLAANEGKAPGDFGFDPLNLAPKTEDAFNELQLKEIKNGRLAMVSVAGMLIQEALTNQGVLEQINSGHLSPFNDGQGAF 309 G++GSDVE FDP LA +D E L WYR+AELKHGR+CMLA++G VQ +HLPD F K +DAL +VS+ERP A QI IAI A+EV G + + APGD FDPL L P+ + ELQLKE+KNGRLAM++ AG+ QE +T QG +EQ+ SGH+SPF DGQGAF Sbjct: 55 GIVGSDVEVPEFDPLGLAKNKDEETLGWYRAAELKHGRVCMLASVGYLVQGLYHLPDGPFEASKPIDALLKVSSERPLAAVQIAIAIAALEVLGASIQKYTAPGDLTFDPLGLKPEDPEELAELQLKELKNGRLAMLATAGLAAQEYVTGQGPVEQLLSGHISPFGDGQGAF 226
BLAST of NO10G01510 vs. NCBI_GenBank
Match: AFA52562.1 (light-harvesting complex protein [Vaucheria litorea]) HSP 1 Score: 181.0 bits (458), Expect = 5.500e-42 Identity = 96/173 (55.49%), Postives = 117/173 (67.63%), Query Frame = 0 Query: 140 GSDVEAIRFDPWNLAAERDPEGLAWYRSAELKHGRICMLAALGLFVQSA-FHLPDDVF-SNPKGLDALFQVSAERPQAIAQILIAIGAIEVAGLAANEGKAPGDFGFDPLNLAPKTE--DAFNELQLKEIKNGRLAMVSVAGMLIQEALTNQGVLEQINSGHLSPFNDGQGAF 309 GSDVEA +DP L+A++ E LAWYRSAELKHGR+ MLA LG FV A LPD VF K DAL Q++ ERP A+ Q+++AI AIE + EG+ PGD GFDPL E F+ L+L+E+KNGRLAM+ +AGM QEALT QGV EQ+ +GH SP DGQG F Sbjct: 101 GSDVEAPFWDPVQLSADKSEETLAWYRSAELKHGRVAMLACLGTFVNGAGIALPDPVFQGTSKSFDALTQIANERPAAVFQVILAIAAIEALSVQLPEGRFPGDLGFDPLKQTAVYEGKGQFDALRLRELKNGRLAMIGIAGMWAQEALTGQGVFEQLAAGHYSPVGDGQGYF 273
BLAST of NO10G01510 vs. NCBI_GenBank
Match: CEM05081.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 179.1 bits (453), Expect = 2.100e-41 Identity = 89/175 (50.86%), Postives = 122/175 (69.71%), Query Frame = 0 Query: 131 NPDFAGGLIGSDVEAIRFDPWNLAAERDPEGLAWYRSAELKHGRICMLAALGLFVQSAFHLPDDVFSNPKGLDALFQVSAERPQAIAQILIAIGAIEVAG----LAANEGKAPGDFGFDPLNLAPKTEDAFNELQLKEIKNGRLAMVSVAGMLIQEALTNQGVLEQINSGHLSPF 302 +P FAGGL+G+D++A FDP L+ D E L WYR+AELKHGR+ MLAALG VQ+ + LPD F ++A++++ +ERP AI QIL AI AIEV G L +G GD +DPL + P + F ++QL+E+KNGRLAM+SV GM QEALT+QG ++QI +G+++PF Sbjct: 50 DPSFAGGLVGNDIDAPNFDPLGLSKTADDETLKWYRAAELKHGRVAMLAALGFLVQNIYQLPDSPFQEANPINAVYKLWSERPLAIMQILTAIAAIEVLGNQVQLQTEDG---GDLKWDPLGIKPNDPEEFRKMQLRELKNGRLAMISVLGMTAQEALTDQGPIDQILTGNVNPF 221
BLAST of NO10G01510 vs. NCBI_GenBank
Match: CEM11606.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 174.5 bits (441), Expect = 5.200e-40 Identity = 92/172 (53.49%), Postives = 117/172 (68.02%), Query Frame = 0 Query: 138 LIGSDVEAIR-FDPWNLAAERDPEGLAWYRSAELKHGRICMLAALGLFVQSAFHLPDDVFSNPKGLDALFQVSAERPQAIAQILIAIGAIEVAGLAANEGKAPGDFGFDPLNLAPKTEDAFNELQLKEIKNGRLAMVSVAGMLIQEALTNQGVLEQINSGHLSPFNDGQGAF 309 L G+DVE +DP L+ D L+ YR+AELKHGR+CM+A LG+ VQ+ F LPD VF+NP+ L+A+ QV +RP+AI QIL+AIGA E+ L + PG P+ E F ELQ KE+KNGRLAM+ ++GML+QEALT QG LEQI GH+SPF DGQG F Sbjct: 46 LAGADVETGGVWDPLGLSQNED--ALSLYRAAELKHGRVCMMAVLGVIVQTYFQLPDPVFNNPRPLEAIVQVWQQRPEAIIQILLAIGATELYFLRQSPEDPPGSLQNFGAAFRPRDEAKFEELQRKELKNGRLAMIGISGMLVQEALTGQGPLEQIQVGHISPFGDGQGYF 215
BLAST of NO10G01510 vs. NCBI_GenBank
Match: EWM28183.1 (light harvesting complex protein [Nannochloropsis gaditana]) HSP 1 Score: 172.2 bits (435), Expect = 2.600e-39 Identity = 92/172 (53.49%), Postives = 115/172 (66.86%), Query Frame = 0 Query: 138 LIGSDVEAIR-FDPWNLAAERDPEGLAWYRSAELKHGRICMLAALGLFVQSAFHLPDDVFSNPKGLDALFQVSAERPQAIAQILIAIGAIEVAGLAANEGKAPGDFGFDPLNLAPKTEDAFNELQLKEIKNGRLAMVSVAGMLIQEALTNQGVLEQINSGHLSPFNDGQGAF 309 LIG+D E +DP L ++ L YR ELKHGR+ M A LG+FVQ +HLPD VFSNP+ L AL QV +RP+AI QI++ +G IE G E +APGD F + PK+E F ELQLKE+KNGRLAMV+ G L+QE LT QG +EQ+ +GHL+PF DGQG F Sbjct: 42 LIGADTETGGIWDP--LGLSQNEGSLRKYRECELKHGRVAMAAMLGIFVQGLYHLPDPVFSNPRPLAALQQVYEQRPEAIWQIIVGLGVIEFTGGRQKEDRAPGDLNFGS-SFIPKSEKEFEELQLKELKNGRLAMVASMGALLQEYLTGQGPVEQVLAGHLNPFGDGQGFF 210
BLAST of NO10G01510 vs. NCBI_GenBank
Match: EWM30498.1 (light-harvesting protein [Nannochloropsis gaditana]) HSP 1 Score: 169.9 bits (429), Expect = 1.300e-38 Identity = 96/173 (55.49%), Postives = 114/173 (65.90%), Query Frame = 0 Query: 138 LIGSDVEAIR-FDPWNLAAERDPEGLAWYRSAELKHGRICMLAALGLFVQSAFHLPDDVFSNPKGLDALFQVSAERPQAIAQILIAIGAIEVA-GLAANEGKAPGDFGFDPLNLAPKTEDAFNELQLKEIKNGRLAMVSVAGMLIQEALTNQGVLEQINSGHLSPFNDGQGAF 309 +IGSDVE FDP LA +D L R ELKHGR+ MLA LG VQS +HLPD+VFSNP+ L AL QV +ERP A QI +AIGAIE+ G +APGD GF + ED F LQLKE+KNGRLAM+++ G +QE LT QG +EQ+ GH SPF DGQGAF Sbjct: 37 MIGSDVETNGVFDPLGLA--KDEASLYRSRLIELKHGRVAMLACLGTLVQSFYHLPDEVFSNPRPLAALAQVYSERPVAFWQIFLAIGAIELTIGKQDTANRAPGDVGFGAAFIPDDAED-FAALQLKELKNGRLAMMAIIGQFVQEKLTGQGPIEQLLEGHFSPFGDGQGAF 206
BLAST of NO10G01510 vs. NCBI_GenBank
Match: EWM23957.1 (chloroplast light harvesting protein isoform 4 [Nannochloropsis gaditana]) HSP 1 Score: 167.5 bits (423), Expect = 6.300e-38 Identity = 92/179 (51.40%), Postives = 118/179 (65.92%), Query Frame = 0 Query: 135 AGGLIGSDVEAIRFDPWNLAAERDPEGLAWYRSAELKHGRICMLAALGLFVQSAFHLPD--DVFS-NPKGLDALFQVSAERPQAIAQILIAIGAIEVAGL--AANEGKAPGDFGFDPLNLAPKTEDAFNELQLKEIKNGRLAMVSVAGMLIQEALTNQGVLEQINSGHLSPFNDGQGAF 309 A GL GSD+E FDP PE L WYR+AELKHGR+ MLAALG VQ + LPD VFS + ++AL +V AERP A QI +AI A+E G A G+APGD G+DPLNL + + ++Q +E+KNGRLAM+++AGML+QE LT GV+EQ G ++PF DG+G F Sbjct: 41 AQGLAGSDIEFPEFDPLGFTNNPKPETLDWYRAAELKHGRVAMLAALGQIVQHFYTLPDASGVFSAGDRPIEALNKVVAERPLAAIQIGLAIFAVEALGQFNQAKPGQAPGDLGWDPLNLKSDDPEIYAKVQNRELKNGRLAMIAIAGMLVQENLTGLGVIEQWVKGDINPFGDGRGFF 219 The following BLAST results are available for this feature:
BLAST of NO10G01510 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO10G01510 ID=NO10G01510|Name=NO10G01510|organism=Nannochloropsis oceanica|type=gene|length=2241bpback to top protein sequence of NO10G01510.1 >NO10G01510.1-protein ID=NO10G01510.1-protein|Name=NO10G01510.1|organism=Nannochloropsis oceanica|type=polypeptide|length=309bpback to top Synonyms
Publications
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