NO10G01340, NO10G01340 (gene) Nannochloropsis oceanica

Overview
NameNO10G01340
Unique NameNO10G01340
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3467
Alignment locationchr10:393633..397099 -

Link to JBrowse

Properties
Property NameValue
DescriptionPeptidyl-prolyl cis-trans isomerase cyclophilin type
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:393633..397099 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003755peptidyl-prolyl cis-trans isomerase activity
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0000413protein peptidyl-prolyl isomerization
GO:0006464cellular protein modification process
Vocabulary: INTERPRO
TermDefinition
IPR029000Cyclophilin-like_dom
IPR002130Cyclophilin-type_PPIase_dom
Homology
[Close]
BLAST of NO10G01340 vs. NCBI_GenBank
Match: EWM25380.1 (peptidyl-prolyl cis-trans isomerase cyclophilin type [Nannochloropsis gaditana])

HSP 1 Score: 614.4 bits (1583), Expect = 3.000e-172
Identity = 328/416 (78.85%), Postives = 362/416 (87.02%), Query Frame = 0 
Query:   63 WRATVLLVIALLAPT-TQAFFLRPATSTSPSQL---AAQSHDQSKNDVRHFSLTSF-PLAGLGFLALNVFAPFIASTPAHALPQKAPETNAQMLLIEALPNKNPLVLDMASSLSKITTEGSGNIRSIDAKGSKGIKPWPEVQRAARSASGTIAGRAKDLIKGATDEKAAQAVLNDLNIRIDQLGAAADAQDREAAVTAQVQAMLRLEQLGTLQVASMPFQPPTAEYPAVPQLLGRAEIEITTRAGKTRQTRQMYAVLDGYSAPLSAGQFVDLAQKKAFDDTKVVATDESSVTFTADAAKAPKRTVPLEIFVVGDEEPTYGETLEEQGRFKERTVLPFNAYGTIAMLHPPDDPNGGANSFFFLKADPSYTPAGLNTLDGAFSVIGYVVKGEDALDDLLAGDAIESVKVLSGLELLKQ 474
            W     + + L+A T  QAFF    +ST P  L   AA   +Q+K+ ++  S  S   L GLG LALNV AP +    A ALPQKAPETNAQMLLI+ALP KNP++LDMASSL+K+TTEGSGNIRSID+KGSKGIKPWPEVQ+AARSASGTIAGR K+LIKGATDEKAAQAVL DLN+RIDQLGAAADAQ+REAAVTAQVQA+LRLEQLGTLQV +MPFQPPT EYP+VPQLLGRAEIEITTRAGKTRQTRQMYA+LDG+SAPLSAGQFVDLAQ+KAFD TK+VATDESSVT TADA K+PKRTVPLEI V GD+EPTYGETLEEQGRFKER VLPFNAYGT+AMLHP DDPNGGANSFFFLKADPSYTPAGLNTLDGAFSVIGYVV+GEDALDDLLAGD +E+V+VLSG ELLKQ
Sbjct:    6 WNGVTTIWVFLVAGTGAQAFF--TVSSTRPHSLLSRAACDLNQNKDSLKQASFPSLQSLPGLGLLALNVLAPSLIPPSAQALPQKAPETNAQMLLIDALPKKNPVLLDMASSLAKVTTEGSGNIRSIDSKGSKGIKPWPEVQKAARSASGTIAGRGKELIKGATDEKAAQAVLTDLNVRIDQLGAAADAQNREAAVTAQVQALLRLEQLGTLQVPTMPFQPPTVEYPSVPQLLGRAEIEITTRAGKTRQTRQMYAILDGFSAPLSAGQFVDLAQRKAFDQTKIVATDESSVTITADAVKSPKRTVPLEILVEGDKEPTYGETLEEQGRFKERVVLPFNAYGTLAMLHPLDDPNGGANSFFFLKADPSYTPAGLNTLDGAFSVIGYVVQGEDALDDLLAGDVVENVRVLSGSELLKQ 419
[Close]
BLAST of NO10G01340 vs. NCBI_GenBank
Match: WP_011056664.1 (peptidyl-prolyl cis-trans isomerase [Thermosynechococcus elongatus] >NP_681610.1 peptidyl-prolyl cis-trans isomerase [Thermosynechococcus elongatus BP-1] >BAC08372.1 peptidyl-prolyl cis-trans isomerase [Thermosynechococcus elongatus BP-1])

HSP 1 Score: 221.1 bits (562), Expect = 7.400e-54
Identity = 148/364 (40.66%), Postives = 198/364 (54.40%), Query Frame = 0 
Query:  122 LALNVFAPFIASTPAHALPQKAPETNAQMLLIEALPNKNPLVLDMASSLSKITTEGSGNIRSIDAKGSKGIKPWPEVQRAARSASGTIAGRAKDLIKGATDEK--AAQAVLNDLNIRIDQLGAAADAQDREAAVTAQVQAMLRLEQLGTLQVASMPFQPPTAEYPAVPQLLGRAEIEITTRAGKTRQTRQMYAVLDGYSAPLSAGQFVDLAQKKAFDDTKVVATDESSVTFTADAAKA------PK----RTVPLEIFVVGDEEPTYGETLEEQGRFKERTVLPFNAYGTIAMLHPPDDPNGGANSFFFLKADPSYTPAGLNTLDGAFSVIGYVVKGEDALDDLLAGDAIESVKVLSGLELLKQ 474
            +AL V  P IA     ALPQ    T+ + LL  ALP  NP V ++   L +I+    G             K W ++      A   I  R  DL++    EK  AA+ +L +L   +D L  AA A+DR   + A+  A+ ++ +L  + V +  + PP   Y  +P+LLGRA +E+ T  GK      +  V+DGYSAPL+AG FVDL Q+  +D       +ES V    D          PK    R +PLEI V GD+ P YG TLE+ GR+ E  VLPF+AYGT+A+  P DDPNGG++ FFFL  +P  TPAGLN LDG ++V GYVV+GE+ L  L  GD I S KV+ GLE L Q
Sbjct:   52 IALPVAPPLIA-----ALPQGNAITDPKALLRWALPIDNPTVRELQKDLEQISFWVRG-------------KQWSKIVSNISKAKTIIRDRTADLLQSIPAEKQEAAKTLLAELETSLDTLQEAAKAKDRSQLLPAKAAALDKVGELEAMMVQNFSYTPPKG-YEHLPRLLGRATVEMETTKGK------LTIVVDGYSAPLTAGNFVDLVQRHFYDGLPFTRAEESYVLQAGDPPGPEVGFIDPKTNQYRAIPLEILVEGDKYPLYGITLEDAGRYLEHPVLPFSAYGTVALARPNDDPNGGSSQFFFLLFEPELTPAGLNLLDGRYAVFGYVVEGEETLRQLRQGDKILSAKVVDGLENLVQ 390
[Close]
BLAST of NO10G01340 vs. NCBI_GenBank
Match: BAY51313.1 (peptidyl-prolyl cis-trans isomerase [Thermosynechococcus vulcanus NIES-2134])

HSP 1 Score: 221.1 bits (562), Expect = 7.400e-54
Identity = 148/364 (40.66%), Postives = 198/364 (54.40%), Query Frame = 0 
Query:  122 LALNVFAPFIASTPAHALPQKAPETNAQMLLIEALPNKNPLVLDMASSLSKITTEGSGNIRSIDAKGSKGIKPWPEVQRAARSASGTIAGRAKDLIKGATDEK--AAQAVLNDLNIRIDQLGAAADAQDREAAVTAQVQAMLRLEQLGTLQVASMPFQPPTAEYPAVPQLLGRAEIEITTRAGKTRQTRQMYAVLDGYSAPLSAGQFVDLAQKKAFDDTKVVATDESSVTFTADAAKA------PK----RTVPLEIFVVGDEEPTYGETLEEQGRFKERTVLPFNAYGTIAMLHPPDDPNGGANSFFFLKADPSYTPAGLNTLDGAFSVIGYVVKGEDALDDLLAGDAIESVKVLSGLELLKQ 474
            +AL V  P IA     ALPQ    T+ + LL  ALP  NP V ++   L +I+    G             K W ++      A   I  R  DL++    EK  AA+ +L +L   +D L  AA A+DR   + A+  A+ ++ +L  + V +  + PP   Y  +P+LLGRA +E+ T  GK      +  V+DGYSAPL+AG FVDL Q+  +D       +ES V    D          PK    R +PLEI V GD+ P YG TLE+ GR+ E  VLPF+AYGT+A+  P DDPNGG++ FFFL  +P  TPAGLN LDG ++V GYVV+GE+ L  L  GD I S KV+ GLE L Q
Sbjct:   52 IALPVAPPLIA-----ALPQGNAITDPKALLRWALPIDNPTVRELQKDLEQISFWVRG-------------KQWSKIVSNISKAKTIIRDRTADLLQSIPAEKQEAAKTLLAELETSLDTLQEAAKAKDRSQLLPAKAAALDKVGELEAMMVQNFSYTPPKG-YEHLPRLLGRATVEMETTKGK------LTIVVDGYSAPLTAGNFVDLVQRHFYDGLPFTRAEESYVLQAGDPPGPEVGFIDPKTNQYRAIPLEILVEGDKYPLYGITLEDAGRYLEHPVLPFSAYGTVALARPNDDPNGGSSQFFFLLFEPELTPAGLNLLDGRYAVFGYVVEGEETLRQLRQGDKILSAKVVDGLENLVQ 390
[Close]
BLAST of NO10G01340 vs. NCBI_GenBank
Match: AHB89362.1 (peptidyl-prolyl cis-trans isomerase M23 [Thermosynechococcus sp. NK55a])

HSP 1 Score: 219.2 bits (557), Expect = 2.800e-53
Identity = 147/364 (40.38%), Postives = 199/364 (54.67%), Query Frame = 0 
Query:  122 LALNVFAPFIASTPAHALPQKAPETNAQMLLIEALPNKNPLVLDMASSLSKITTEGSGNIRSIDAKGSKGIKPWPEVQRAARSASGTIAGRAKDLIKGATDEK--AAQAVLNDLNIRIDQLGAAADAQDREAAVTAQVQAMLRLEQLGTLQVASMPFQPPTAEYPAVPQLLGRAEIEITTRAGKTRQTRQMYAVLDGYSAPLSAGQFVDLAQKKAFDDTKVVATDESSVTFTADAAKA------PK----RTVPLEIFVVGDEEPTYGETLEEQGRFKERTVLPFNAYGTIAMLHPPDDPNGGANSFFFLKADPSYTPAGLNTLDGAFSVIGYVVKGEDALDDLLAGDAIESVKVLSGLELLKQ 474
            +AL V  P IA     ALPQ    T+ + LL  ALP  NP V ++   L +I+    G             K W ++      A   I  RA +L++    EK  AA+ +L +L   +D L  AA A+DR   + A+  A+ ++ +L  + V +  + PP   Y  +P+LLGRA +E+ T  GK      +  V+DGYSAPL+AG FVDL Q+  +D       +ES V    D          PK    R +PLEI V GD+ P YG TLE+ GR+ +  VLPF+AYGT+A+  P DDPNGG++ FFFL  +P  TPAGLN LDG ++V GYVV+GE+ L  L  GD I S KV+ GLE L Q
Sbjct:   29 IALPVEPPLIA-----ALPQGNAITDPKALLRWALPIDNPTVRELQKDLEQISFWVRG-------------KQWSKIASNISKAKTIIRDRADELLQRIPAEKQEAAKTLLAELETSLDTLQEAAKAKDRSQLLPAKAAALDKVGELEAMMVQNFSYTPPKG-YEHLPRLLGRATVEMETSKGK------LTIVVDGYSAPLTAGNFVDLVQRHFYDGLPFTRAEESYVLQAGDPPGPEVGFIDPKTNQYRAIPLEILVEGDKYPLYGITLEDAGRYLDHPVLPFSAYGTVALARPNDDPNGGSSQFFFLLFEPELTPAGLNLLDGRYAVFGYVVEGEETLRQLRQGDKILSAKVVDGLEHLVQ 367
[Close]
BLAST of NO10G01340 vs. NCBI_GenBank
Match: WP_006620157.1 (peptidyl-prolyl cis-trans isomerase [Arthrospira platensis] >BAI90162.1 hypothetical protein NIES39_D07450 [Arthrospira platensis NIES-39] >KDR55694.1 peptidylprolyl isomerase [Arthrospira platensis str. Paraca] >AMW28282.1 peptidylprolyl isomerase [Arthrospira platensis YZ])

HSP 1 Score: 218.8 bits (556), Expect = 3.700e-53
Identity = 138/359 (38.44%), Postives = 202/359 (56.27%), Query Frame = 0 
Query:  132 ASTPAH--ALPQKAPETNAQMLLIEALPNKNPLVLDMASSLSKITTEGSGNIRSIDAKGSKGIKPWPEVQRAARSASGTIAGRAKDLIKGATDEK--AAQAVLNDLNIRIDQLGAAADAQDREAAVTAQVQAMLRLEQLGTLQVASMPFQPPTAEYPAVPQLLGRAEIEITTRAGKTRQTRQMYAVLDGYSAPLSAGQFVDLAQKKAFDDTKVVATDESSVTFTADAAKAPK----------RTVPLEIFVVGDEEPTYGETLEEQGRFKERTVLPFNAYGTIAMLHPPDDPNGGANSFFFLKADPSYTPAGLNTLDGAFSVIGYVVKGEDALDDLLAGDAIESVKVLSGLELLKQSGK 477
            +STP     LP     T+ + LL  ALP  N  +    SSL +I    +G IR          K W  ++    +A+  ++    D++    D++   A+A++ +L   I+ L +A D +D E  +  + Q + ++ QL  + V   PF+ P AEY  +PQL GRA +++TT  G       +  V+DGYSAP++AG FVDL Q+  +D  + + ++ES V    D     +          R VPLEI V GD+EPTYG TLE  GR++++ VLPF+AYGT+AM  P  +P+GG++ FFF   +P  TPAGLN LDG +SV GYV +G++ L++L  GDAI S KV+ GLE L Q  K
Sbjct:   41 SSTPKRESVLPAGNAITDGKALLRYALPIDNEPIRKFQSSLEEI----AGRIRG---------KRWSPIKGDITTAARILSINEGDILASIPDDRQTEAKAIIEELRAEIEVLRSALDIKDGETLLETRAQMLSQVTQLEEMMVGEFPFEVP-AEYANIPQLKGRATVKMTTSEG------DITLVVDGYSAPVTAGNFVDLVQRGFYDGLEFIRSEESYVLQVGDPPGPEEGFIDPDTGEYRAVPLEILVRGDDEPTYGITLEAAGRYRDQPVLPFSAYGTVAMARPESNPDGGSSQFFFFLFEPELTPAGLNLLDGRYSVFGYVTEGKEVLENLTQGDAIASAKVIQGLENLVQPKK 379
[Close]
BLAST of NO10G01340 vs. NCBI_GenBank
Match: WP_041429273.1 (peptidylprolyl isomerase [Thermosynechococcus sp. NK55a])

HSP 1 Score: 218.8 bits (556), Expect = 3.700e-53
Identity = 151/385 (39.22%), Postives = 204/385 (52.99%), Query Frame = 0 
Query:  103 KNDVRHFSLTSFPLAGLGFLALNVFAPFIASTPAH--ALPQKAPETNAQMLLIEALPNKNPLVLDMASSLSKITTEGSGNIRSIDAKGSKGIKPWPEVQRAARSASGTIAGRAKDLIKGATDEK--AAQAVLNDLNIRIDQLGAAADAQDREAAVTAQVQAMLRLEQLGTLQVASMPFQPPTAEYPAVPQLLGRAEIEITTRAGKTRQTRQMYAVLDGYSAPLSAGQFVDLAQKKAFDDTKVVATDESSVTFTADAAKA------PK----RTVPLEIFVVGDEEPTYGETLEEQGRFKERTVLPFNAYGTIAMLHPPDDPNGGANSFFFLKADPSYTPAGLNTLDGAFSVIGYVVKGEDALDDLLAGDAIESVKVLSGLELLKQ 474
            K   R F+L    L  LG   L   A  +   P    ALPQ    T+ + LL  ALP  NP V ++   L +I+    G             K W ++      A   I  RA +L++    EK  AA+ +L +L   +D L  AA A+DR   + A+  A+ ++ +L  + V +  + PP   Y  +P+LLGRA +E+ T  GK      +  V+DGYSAPL+AG FVDL Q+  +D       +ES V    D          PK    R +PLEI V GD+ P YG TLE+ GR+ +  VLPF+AYGT+A+  P DDPNGG++ FFFL  +P  TPAGLN LDG ++V GYVV+GE+ L  L  GD I S KV+ GLE L Q
Sbjct:   26 KRRKRWFALLVILLLWLGTFLLPPLAIALPVEPXXIAALPQGNAITDPKALLRWALPIDNPTVRELQKDLEQISFWVRG-------------KQWSKIASNISKAKTIIRDRADELLQRIPAEKQEAAKTLLAELETSLDTLQEAAKAKDRSQLLPAKAAALDKVGELEAMMVQNFSYTPPKG-YEHLPRLLGRATVEMETSKGK------LTIVVDGYSAPLTAGNFVDLVQRHFYDGLPFTRAEESYVLQAGDPPGPEVGFIDPKTNQYRAIPLEILVEGDKYPLYGITLEDAGRYLDHPVLPFSAYGTVALARPNDDPNGGSSQFFFLLFEPELTPAGLNLLDGRYAVFGYVVEGEETLRQLRQGDKILSAKVVDGLEHLVQ 390
[Close]
BLAST of NO10G01340 vs. NCBI_GenBank
Match: WP_082906374.1 (peptidylprolyl isomerase [Phormidesmis priestleyi])

HSP 1 Score: 216.9 bits (551), Expect = 1.400e-52
Identity = 135/351 (38.46%), Postives = 190/351 (54.13%), Query Frame = 0 
Query:  133 STPAHALPQKAPETNAQMLLIEALPNKNPLVLDMASSLSKITTEGSGNIRSIDAKGSKGIKPWPEVQRAARSASGTIAGRAKDLIKGATDEK--AAQAVLNDLNIRIDQLGAAADAQDREAAVTAQVQAMLRLEQLGTLQVASMPFQPPTAEYPAVPQLLGRAEIEITTRAGKTRQTRQMYAVLDGYSAPLSAGQFVDLAQKKAFDDTKVVATDESSV----------TFTADAAKAPKRTVPLEIFVVGDEEPTYGETLEEQGRFKERTVLPFNAYGTIAMLHPPDDPNGGANSFFFLKADPSYTPAGLNTLDGAFSVIGYVVKGEDALDDLLAGDAIESVKVLSGLELL 472
            S PA ALP   P  N + LL  +LP  NP V  + SSL  ITT+   N R            W  V    + A   ++ R   L+    D+K   A+A +  L   ++QL  +A+A+D+E   + +   +  + +L  L V   P++ P  EY  +PQL GRA +   T  G       +  VLDG+SAP++AG F DL Q+  +D  +    ++S V              D A    R+VPLEI V GD+EP YG TLE+ GR+ ++ VLPF+AYG +AM  P +DPNGG++ FFF   +P  TPAGLN LDG +++ G+V  G D L+ L AGD IES+KV+ GL+ L
Sbjct:   34 SLPAQALPPGNPIVNPEALLRYSLPIDNPDVRKLQSSLEDITTQLRANRR------------WGAVVSDVKQAYRILSDRPTQLLASIPDDKKPQAEAFIEKLKTGVEQLQISAEAKDKEQTRSQRADLLTLVSRLEELMVQKFPYEVP-EEYSNLPQLKGRATVTAKTNQG------DLTIVLDGFSAPVTAGNFADLVQRGFYDGLQFTRAEDSYVLQIGDPPGADVGFVDPATKKYRSVPLEILVKGDKEPLYGITLEDAGRYLDQPVLPFSAYGALAMARPGEDPNGGSSQFFFFLFEPELTPAGLNLLDGRYAIFGFVTSGRDVLEKLKAGDTIESMKVIDGLDNL 365
[Close]
BLAST of NO10G01340 vs. NCBI_GenBank
Match: WP_073071804.1 (peptidylprolyl isomerase [Phormidesmis priestleyi] >PSB19775.1 peptidylprolyl isomerase [Phormidesmis priestleyi ULC007])

HSP 1 Score: 216.1 bits (549), Expect = 2.400e-52
Identity = 136/351 (38.75%), Postives = 191/351 (54.42%), Query Frame = 0 
Query:  133 STPAHALPQKAPETNAQMLLIEALPNKNPLVLDMASSLSKITTEGSGNIRSIDAKGSKGIKPWPEVQRAARSASGTIAGRAKDLIKGATDEK--AAQAVLNDLNIRIDQLGAAADAQDREAAVTAQVQAMLRLEQLGTLQVASMPFQPPTAEYPAVPQLLGRAEIEITTRAGKTRQTRQMYAVLDGYSAPLSAGQFVDLAQKKAFDDTKVVATDESSVTFTA----------DAAKAPKRTVPLEIFVVGDEEPTYGETLEEQGRFKERTVLPFNAYGTIAMLHPPDDPNGGANSFFFLKADPSYTPAGLNTLDGAFSVIGYVVKGEDALDDLLAGDAIESVKVLSGLELL 472
            S PA ALP   P  N + LL  +LP  N  V  + SSL  ITT+   N R            W  V    + A   +  R   L+    D+K   A+A++  L   ++QL  +A+A+D+E   + +   +  + +L  L V   P++ P A Y  +PQL GRA +   T  G       +  VLDGYSAP++AG FVDL Q+  +D  K    ++S V              D A    R+VPLEI V GD+EP YG TLE+ GR+ ++ VLPF+AYG +AM  P +DPNGG++ FFF   +P  TPAGLN LDG +++ G+V +G + L+ L AGD IES+KV+ GL+ L
Sbjct:   37 SLPAQALPPGNPIVNPEALLRYSLPIDNSEVRKLQSSLEDITTQLRANRR------------WGSVVSDIKQAYSILNDRPAQLLASIPDDKKPQAEAIIEKLKTGVEQLQTSAEAKDKEQTRSQRSDLLTLVSRLEELMVQKFPYEVPEA-YSNLPQLKGRATVVAKTDHG------DLTIVLDGYSAPVTAGNFVDLVQRGFYDGLKFTRAEDSYVLQIGDPPGSEVGFIDPATKKYRSVPLEILVKGDKEPLYGITLEDAGRYLDQPVLPFSAYGALAMARPGEDPNGGSSQFFFFLFEPELTPAGLNLLDGRYAIFGFVTEGREVLEKLKAGDTIESMKVVDGLDNL 368
[Close]
BLAST of NO10G01340 vs. NCBI_GenBank
Match: WP_015146996.1 (peptidyl-prolyl cis-trans isomerase [Oscillatoria acuminata] >AFY80346.1 peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Oscillatoria acuminata PCC 6304])

HSP 1 Score: 214.2 bits (544), Expect = 9.100e-52
Identity = 131/343 (38.19%), Postives = 191/343 (55.69%), Query Frame = 0 
Query:  139 LPQKAPETNAQMLLIEALPNKNPLVLDMASSLSKITTEGSGNIRSIDAKGSKGIKPWPEVQRAARSASGTIAGRAKDLIKGATDEKA--AQAVLNDLNIRIDQLGAAADAQDREAAVTAQVQAMLRLEQLGTLQVASMPFQPPTAEYPAVPQLLGRAEIEITTRAGKTRQTRQMYAVLDGYSAPLSAGQFVDLAQKKAFDDTKVVATDESSVTFTADAAKAPK----------RTVPLEIFVVGDEEPTYGETLEEQGRFKERTVLPFNAYGTIAMLHPPDDPNGGANSFFFLKADPSYTPAGLNTLDGAFSVIGYVVKGEDALDDLLAGDAIESVKVLSGLE 470
            LPQ    T+ + LL  ALP KN  + +  SSL  I  +  G             K W  +      A+G    R  D+++   + +   A A+L+ +   I  L +  +A+D+ A    + + +  + QL  + VA  P+Q P AEY  +PQLLGRA + + T  G       +  VLDGYSAP+++G FVDL Q+  +D  + + +++  V  T D     +          R +PLE+ V GD +PTYG TLEE GRF+E+ VLPF+A+GT+AM  P DDP+GG++ FFF   +P  TPAGLN LDG +SV GYVV+G++ L+ L  GD I S+KV+ G+E
Sbjct:   51 LPQGNAITDGKALLRYALPIKNRAIREAQSSLEDIGQQLRG-------------KRWSSITSDITKAAGIFTNREADILEDIPESQQANASAILDQIKEEIGTLRSIVEAEDKPATQDGRDRLLGLVGQLEKMMVAEFPYQVP-AEYSHLPQLLGRATVAVETNKG------NLTVVLDGYSAPVTSGNFVDLVQRGFYDGLEFIRSEDFYVLQTGDPVGPDQGFIDPDTGEYRNIPLEVLVRGDIQPTYGITLEEAGRFREQPVLPFSAFGTVAMARPEDDPDGGSSQFFFFLFEPELTPAGLNLLDGRYSVFGYVVEGKEILEKLKQGDQILSMKVVQGIE 373
[Close]
BLAST of NO10G01340 vs. NCBI_GenBank
Match: WP_008057492.1 (MULTISPECIES: peptidyl-prolyl cis-trans isomerase [Arthrospira] >CCE20841.1 putative Peptidyl-prolyl cis-trans isomerase, cyclophilin family [Arthrospira sp. PCC 8005] >CDM93466.1 putative Peptidyl-prolyl cis-trans isomerase, cyclophilin family [Arthrospira sp. PCC 8005])

HSP 1 Score: 213.4 bits (542), Expect = 1.500e-51
Identity = 134/358 (37.43%), Postives = 195/358 (54.47%), Query Frame = 0 
Query:  133 STPAH--ALPQKAPETNAQMLLIEALPNKNPLVLDMASSLSKITTEGSGNIRSIDAKGSKGIKPWPEVQRAARSASGTIAGRAKDLIKGATDEKAAQ--AVLNDLNIRIDQLGAAADAQDREAAVTAQVQAMLRLEQLGTLQVASMPFQPPTAEYPAVPQLLGRAEIEITTRAGKTRQTRQMYAVLDGYSAPLSAGQFVDLAQKKAFDDTKVVATDESSVTFTADAAKAPK----------RTVPLEIFVVGDEEPTYGETLEEQGRFKERTVLPFNAYGTIAMLHPPDDPNGGANSFFFLKADPSYTPAGLNTLDGAFSVIGYVVKGEDALDDLLAGDAIESVKVLSGLELLKQSGK 477
            STP     LP     T+ + LL  ALP  N  +     SL +I     G             K W  ++    +A+  ++    D++    D + A+  A++ +L   I+++ +A D +D E  +  +   + ++ QL  + V   PF+ P AEY  +PQL GRA +++TT  G       +  V+DGYSAP++AG FVDL Q+  +D  + + ++ES V    D     +          R VPLEI V GD+EPTYG TLE  GR++++ VLPF+AYGT+AM  P  DP+GG++ FFF   +P  TPAGLN LDG +SV GYV +G++ L +L  GDAI S KV+ GLE L Q  K
Sbjct:   42 STPKRESVLPAGNAITDGKALLRYALPIDNEPIRKFQGSLEEIADRIRG-------------KRWSPIKGDITTAARILSINEGDILASIPDARQAEAKAIIEELRAEIERMRSALDVKDGETLLETRASMLSQVTQLQEMMVGEFPFEVP-AEYANIPQLKGRATVKMTTSEG------DITLVVDGYSAPVTAGNFVDLVQRGFYDGLEFIRSEESYVLQVGDPPGPEEGFIDPDTGEYRAVPLEILVRGDDEPTYGITLEAAGRYRDQPVLPFSAYGTVAMARPESDPDGGSSQFFFFLFEPELTPAGLNLLDGRYSVFGYVTEGKEVLRNLTQGDAIASAKVIQGLENLVQPKK 379
The following BLAST results are available for this feature:
BLAST of NO10G01340 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25380.13.000e-17278.85peptidyl-prolyl cis-trans isomerase cyclophilin ty... [more]
WP_011056664.17.400e-5440.66peptidyl-prolyl cis-trans isomerase [Thermosynecho... [more]
BAY51313.17.400e-5440.66peptidyl-prolyl cis-trans isomerase [Thermosynecho... [more]
AHB89362.12.800e-5340.38peptidyl-prolyl cis-trans isomerase M23 [Thermosyn... [more]
WP_006620157.13.700e-5338.44peptidyl-prolyl cis-trans isomerase [Arthrospira p... [more]
WP_041429273.13.700e-5339.22peptidylprolyl isomerase [Thermosynechococcus sp. ... [more]
WP_082906374.11.400e-5238.46peptidylprolyl isomerase [Phormidesmis priestleyi][more]
WP_073071804.12.400e-5238.75peptidylprolyl isomerase [Phormidesmis priestleyi]... [more]
WP_015146996.19.100e-5238.19peptidyl-prolyl cis-trans isomerase [Oscillatoria ... [more]
WP_008057492.11.500e-5137.43MULTISPECIES: peptidyl-prolyl cis-trans isomerase ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL053nonsL053Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL052nonsL052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR004ncniR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR017ngnoR017Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR015ngnoR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001002NSK001002Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO10G01340.1NO10G01340.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|586451gene_4082Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100005g118gene5141Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO10G01340.1NO10G01340.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO10G01340 ID=NO10G01340|Name=NO10G01340|organism=Nannochloropsis oceanica|type=gene|length=3467bp
CTCTTTTTTTACTTGCATACTTCTTTCCCGGCAATCAATTTGGTTGCTCA
ATCTGTATGGTCACCCTGTCCATCGTTACCCTGGCTTTCTCACAACCACA
CCCCCTTGACCGTCGCAGCTTCCGCCACCTCCCGCTCCTCCCATTCCTGA
TACCCGACAAATGCGCACCAATTTTTGCTTCACTGACAAGATCAAGGTCG
CTCACATTTAGATCGTAATTACTTAAAAACTTCATTTCTTTGCTATGACT
ATCAGACACTCTTCAACGTCAACCTCACGTCGACGTCCGAGTCGTCACGT
CGACGTTTATGACGTTTGGATTTCTTGCTTCTTGAGGCCTGTACCACTGC
TATTTGCTCACGGTTAAAAGACACCCTCATACTATAACATACACACACAC
ACCGAACAAATGTCTGACTTGTCGTCAGAAGAAATTTCTAATGACCCATC
CACCACTAGCAATGCTGCCAGGAGCCTGTCTGTAGCTGCACGGGATTTAG
AAGCGGAGGAACGGGGCAAGCGCGCCCAACATCTCAACCTGTACGCCACA
GTCTTACAGGTGGTGAAGGAGAAATATTATGTGTGACGCTCCACCCTCCT
GATCAAGCCCTTCAATAAGGATGGAAGGGGTGGCTATAACTGTATGGGGT
GCAACGAATGGAAGAAGGGAAACTTCTCGCAGGCGGGCGACCACCTAAGG
AATCGCCATCCAGACGAATGGACTCGCATGAAACGCCTCTCTAACGCAGA
GGAGAGTGATACCGTGATGCCTTGTCCTTTGGGTTGAAGGTGCAGACCAA
ACTCCATCACCACCAATCCTGGCGAGGCGATGCCCTCCAACGCGGGCACA
AGTACCTTACTGGCTTATTTTTTGGCAGCCTCCGACCATTCAACCTATTC
AAGCCCTCAATTACCTTGGTCGGGAAATCTGTGATCACGGCGGCCGTGTG
GTGCTTCTTCAAGCACTCCACATGTCCAGGCAGATGAGGCGGGGCCTAAA
GTTGTCGTCCAGTGTGGTGGCAAGCGTGCCGTTGTAGGACGTGCCGTTGC
GTCCGGCCCAAGCATCTATTTGAAGGCAGGCGGTCAGACTACATACTGGA
CCAACCCCCTTAACCGAGCTCAGCGGGGCGAAATAGCCCTTGATGAGCCC
CTTGAACTGGCAAACATTGCCCCCGTGTACTTGCGTACGAATCAAAAAGC
AAATTAATGGCACCCCTTACTCTATTACAAATTGATGTTTATGGCCTGGT
GTTTGGGGGATTTGCGATGCTGCAGCTTGAAGGAGGCGGATCAGTTAGCC
ATGTGAGAAGCGGCAACACAGGGGACTACCCTTGGTCCCTAAGTTCCATG
GATTGTTTTTCGCTTCCTCTAGTCTTGCTGGGCACGGTTGTGACGCTTTG
TTGTAGCCCCATCCCCTCGTGACAAGCGGTAACGCCGTCACCCCCCCTAT
CTACCATCCGCGACATTCCGGTTCTCGTGTTGACGTGACGAGACTACGTT
TGACGGGTCAAACTCAACCCTGGGGGAGGTAGAGGTCCTCTACCTCCCCG
TTTTCTCTACATTCCTCCCCGGCTTTCCCCCTCCAAGTTTGCCGCTGTTG
ACGACAAGGACTTTCACATTCTACTTACATACTTCCCGCCCCCTTTTATA
AAGAAGAGGAGGTTACCCACCAAACCATCGTCCTCCACCTCGCACTTTTG
CCGTTGTTATTGTTGTTGCTGCTGATGCTGCTGCTGTCTGGTGCTAGGAT
GGTTCAAGGGGAATGCGCAGCGATCATTGCCTTAAATGTATAACACTGAG
TGTACACGTACGTGCATATGGCCACTGGCAGTTCGCGCTCATTTGGCGAG
ATTATGTCAGGTCCAGCCTCGGTGTCAGACCCTGTCCTCGCACTTAACCA
TCCTAACTCACCCAGTTTCTACATCGCGGCATGCCAAACAGACTATGCGG
ACGACGCTGATGGAAAGCTTTTGGAGAGCCACTGTGCTCCTGGTCATAGC
ACTTTTGGCCCCCACCACACAAGCCTTCTTCTTGCGACCTGCAACATCGA
CCTCTCCGTCCCAGCTGGCAGCCCAGTCTCACGATCAAAGCAAGAATGAC
GTGCGGCATTTCTCCCTGACTTCTTTTCCACTTGCAGGCCTCGGTTTTTT
GGCGCTGAATGTTTTCGCCCCCTTCATAGCGAGCACCCCCGCGCATGCCC
TCCCGCAAAAAGCGCCCGAAACCAATGCGCAAATGCTGCTGATCGAAGCC
CTTCCCAACAAGAACCCCTTGGTCTTGGACATGGCCTCTTCCCTGTCTAA
AATTACTACAGgtacgtttcttcctttcctcccttcttgcctccccacaa
tgagctcccaaacaagtacttcgtcctccacgcctgcctacacgagtccg
catccaacttatccatcacacagAGGGCAGTGGAAACATTCGGTCCATCG
ACGCCAAAGGCAGCAAAGGTATCAAGCCATGGCCGGAAGTTCAGCGGGCG
GCGCGATCTGCATCTGGCACTATTGCCGGTCGTGCCAAGGACCTCATCAA
GGGGGCCACGGACGAGAAAGCTGCTCAAGCCGTTCTCAATGATTTGAACA
TTCGCATCGACCAGCTCGGCGCGGCGGCAGACGCCCAAGATCGTGAAGCA
GCGGTCACGGCACAAGTCCAGGCTATGCTGCGGTTAGAGCAGCTGGGCAC
ATTGCAAGTGGCCTCGATGCCTTTCCAACCCCCAACTGCAGAGTACCCTG
CCGTGCCCCAGCTACTGGGAAGAGCCGAAATCGAGATTACAACTCGTGCA
GGAAAGACGAGGCAGACTCGGCAGATGTACGCTGTGCTTGATGGATATAG
TGCACCATTGTCGGCCGGACAGTTTGTGGACCTCGCGCAAAAAAAAGCGT
TTGATGACACGAAAGTTGTAGCGACGGACGAAAGCTCTGTGACTTTTACC
GCGGATGCAGCCAAGGCCCCGAAGCGAACAGTACCCTTGGAAATTTTTGT
GGTAGGGGATGAGGAGCCTACCTATGGTGAAACCTTGGAGGAGCAGGGTA
GGTTTAAGGAGCGGACTGTGTTGCCATTCAATGCGTACGGCACCATTGCG
ATGCTACACCCGCCTGATGACCCGAATGGAGGAGCAAATTCTTTTTTCTT
TTTGAAGGCCGATCCCAGCTATACGCCAGCGGGATTGAACACTTTGGATG
GGGCGTTCAGTGTGATAGGGTATGTGGTGAAGGGGGAGGATGCCCTGGAT
GATTTGTTGGCGGGAGACGCGATTGAGAGCGTCAAGGTGTTGTCGGGGTT
GGAATTGTTGAAACAAAGCGGCAAATAATTTTCTTGCCGGATTGCAATTG
AAATAAAACCGTATTTCGAAATGGATAAGCCATCATAATTTCGTTTTTTG
CTGGGGAGAGGGGGGTAGGTTTTATCGCCGAGACTGTTATTTCCGATGTA
GAGAAAAATAAAAAAAT
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protein sequence of NO10G01340.1

>NO10G01340.1-protein ID=NO10G01340.1-protein|Name=NO10G01340.1|organism=Nannochloropsis oceanica|type=polypeptide|length=477bp
MYNTECTRTCIWPLAVRAHLARLCQVQPRCQTLSSHLTILTHPVSTSRHA
KQTMRTTLMESFWRATVLLVIALLAPTTQAFFLRPATSTSPSQLAAQSHD
QSKNDVRHFSLTSFPLAGLGFLALNVFAPFIASTPAHALPQKAPETNAQM
LLIEALPNKNPLVLDMASSLSKITTEGSGNIRSIDAKGSKGIKPWPEVQR
AARSASGTIAGRAKDLIKGATDEKAAQAVLNDLNIRIDQLGAAADAQDRE
AAVTAQVQAMLRLEQLGTLQVASMPFQPPTAEYPAVPQLLGRAEIEITTR
AGKTRQTRQMYAVLDGYSAPLSAGQFVDLAQKKAFDDTKVVATDESSVTF
TADAAKAPKRTVPLEIFVVGDEEPTYGETLEEQGRFKERTVLPFNAYGTI
AMLHPPDDPNGGANSFFFLKADPSYTPAGLNTLDGAFSVIGYVVKGEDAL
DDLLAGDAIESVKVLSGLELLKQSGK*
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Synonyms
Publications