NO10G01260, NO10G01260 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO10G01260 vs. NCBI_GenBank
Match: PAW85267.1 (hypothetical protein B9S29_02225 [Opitutae bacterium Tous-C2FEB]) HSP 1 Score: 334.0 bits (855), Expect = 8.700e-88 Identity = 160/244 (65.57%), Postives = 184/244 (75.41%), Query Frame = 0 Query: 2 PGSIRVKADGFEANEEDIAAVCLSAIRELQRHCPALPTEDVVIEHGGGEGHAIVLHERNNHGEVVIRLDTCKTFWSQYAYQAAHEMCHVHCSFRCGPIQNQWFEETVCETASLFCLRAMAHTWKTEPPYRHWADYATSLLEYTEDVISKRIYKAELINKGLPQFYRDHETELRANACGRELNGAIALALLPYLEEMPKHWAAFHWLNATERPESEPFVDYLTRWEQNTPAEYKATVQGVQALFG 246 P +IR+ A+GFEA+E DIA VCLSA ELQ+ P LP E+VV+ G I L +RN+ E+V+RLDT KTFWSQYAYQ AHE+ H+HC FR GP +N WFEE+VCETASLFCLRAMA TWKT PPY HWA YA SL Y +D+I KR YKAE KGLP+FYRDHE LRAN RELNGA+AL LL YLEE P WAAF WLNAT RP+ E F DYL RWEQNTPAE+K +V+G+Q LFG Sbjct: 22 PHAIRIVAEGFEASERDIAKVCLSAASELQKWSPGLPFENVVVVK--GTKGPITLFKRNDQKEIVVRLDTRKTFWSQYAYQFAHELGHIHCGFRDGPPENLWFEESVCETASLFCLRAMAVTWKTNPPYPHWASYAPSLRGYADDIIVKRTYKAEAELKGLPKFYRDHEAVLRANPTERELNGAVALFLLKYLEEKPTRWAAFRWLNATARPKDESFKDYLKRWEQNTPAEHKDSVRGIQKLFG 263
BLAST of NO10G01260 vs. NCBI_GenBank
Match: PAZ03244.1 (hypothetical protein CAK89_02500 [Opitutae bacterium AMD-G3]) HSP 1 Score: 330.1 bits (845), Expect = 1.200e-86 Identity = 159/244 (65.16%), Postives = 183/244 (75.00%), Query Frame = 0 Query: 2 PGSIRVKADGFEANEEDIAAVCLSAIRELQRHCPALPTEDVVIEHGGGEGHAIVLHERNNHGEVVIRLDTCKTFWSQYAYQAAHEMCHVHCSFRCGPIQNQWFEETVCETASLFCLRAMAHTWKTEPPYRHWADYATSLLEYTEDVISKRIYKAELINKGLPQFYRDHETELRANACGRELNGAIALALLPYLEEMPKHWAAFHWLNATERPESEPFVDYLTRWEQNTPAEYKATVQGVQALFG 246 P +IR+ A+GFEA+E DIA VCLSA ELQ+ P LP E+VV+ G I L +RN+ E+V+RLDT KTFWSQYAYQ AHE+ H+HC FR GP +N WFEE+VCETASLF LRAMA TWKT PPY HWA YA SL Y +D+I KR YKAE KGLP+FYRDHE LRAN RELNGA+AL LL YLEE P WAAF WLNAT RP+ E F DYL RWEQNTPAE+K +V+G+Q LFG Sbjct: 22 PHAIRIVAEGFEASERDIAKVCLSAASELQKWSPGLPFENVVVVK--GTKGPITLFKRNDQKEIVVRLDTRKTFWSQYAYQFAHELGHIHCGFRDGPPENLWFEESVCETASLFSLRAMAVTWKTNPPYPHWASYAPSLRGYADDIIVKRTYKAEAELKGLPKFYRDHEAVLRANPTERELNGAVALFLLKYLEEKPTRWAAFRWLNATARPKDESFKDYLKRWEQNTPAEHKDSVRGIQKLFG 263
BLAST of NO10G01260 vs. NCBI_GenBank
Match: OUT89745.1 (hypothetical protein CBB78_00940 [Roseibacillus sp. TMED18]) HSP 1 Score: 221.5 bits (563), Expect = 6.300e-54 Identity = 102/242 (42.15%), Postives = 146/242 (60.33%), Query Frame = 0 Query: 5 IRVKADGFEANEEDIAAVCLSAIRELQRHCPALPTEDVVIEHGGGEGHAIVLHERNNHGEVVIRLDTCKTFWSQYAYQAAHEMCHVHCSFRCGPIQNQWFEETVCETASLFCLRAMAHTWKTEPPYRHWADYATSLLEYTEDVISKRIYKAELINKGLPQFYRDHETELRANACGRELNGAIALALLPYLEEMPKHWAAFHWLNATERPESEPFVDYLTRWEQNTPAEYKATVQGVQALFGV 247 IR+ + F A+ DI AVC SA +L + +P + ++ G+ I L +R GE +++L T KTFW+QYAYQ +HE+CHV C + N WFEE +CETASL+CLRAM+ W+T PPY +W Y+ +L +Y +++ R E++ GLP +YR H L N R+ NGAIAL LL LE P+HW A WLN++ PE E F+ YLT+W + P ++ V+ +LFG+ Sbjct: 32 IRINPENFNASRADIGAVCRSAGDQLMKQMEGMPA--LTVQVSRGQHGPIALFKRGKEGEYLVKLATEKTFWAQYAYQFSHEICHVLCGYENDYRGNLWFEEALCETASLYCLRAMSREWRTTPPYGNWRSYSPALFDYADNIQKGRDDYIEILRIGLPVYYRKHAALLSDNPTDRKKNGAIALVLLTLLERNPEHWNAIRWLNSSPSPEGETFLQYLTKWHRAVPQKHTGFVEVTASLFGI 271
BLAST of NO10G01260 vs. NCBI_GenBank
Match: WP_035615716.1 (hypothetical protein [Haloferula sp. BvORR071]) HSP 1 Score: 214.9 bits (546), Expect = 5.900e-52 Identity = 103/224 (45.98%), Postives = 135/224 (60.27%), Query Frame = 0 Query: 2 PGSIRVKADGFEANEEDIAAVCLSAIRELQRHCPALPTEDVVIEHGGGEGHAIVLHERNNHGEVVIRLDTCKTFWSQYAYQAAHEMCHVHCSFRCGPIQNQWFEETVCETASLFCLRAMAHTWKTEPPYRHWADYATSLLEYTEDVISKRIYKAELINKGLPQFYRDHETELRANACGRELNGAIALALLPYLEEMPKHWAAFHWLNATERPESEPFVDYLTRW 226 P R+ ADGF++ E+DI +C S E LP VV+E G EG I L +RN GE V++LDT T+WSQY+YQ AHE+CHV + ++ WFEET+CETASL+CLR M TW++ PY +W YA L +Y +DV+ KR + L+ GLP FY+ H L A C RELNGA+A+ +L E+ P+HW A WLNA E F +L RW Sbjct: 20 PLDTRINADGFDSAEKDITKICESVAAEFTGTWKDLPGTKVVVER-GKEG-PITLDQRNEQGETVVKLDTQGTYWSQYSYQFAHELCHVMATGNKRDRKHLWFEETMCETASLYCLRKMEGTWRSNAPYPNWQSYAPKLGDYAKDVMLKREHYLPLVQSGLPAFYKQHRERLEAEPCDRELNGAMAIVMLACFEKQPQHWEAVKWLNAGPAGELPSFAAFLKRW 241
BLAST of NO10G01260 vs. NCBI_GenBank
Match: OUU90499.1 (hypothetical protein CBC36_00335 [Verrucomicrobiaceae bacterium TMED76]) HSP 1 Score: 177.9 bits (450), Expect = 7.900e-41 Identity = 87/243 (35.80%), Postives = 133/243 (54.73%), Query Frame = 0 Query: 5 IRVKADGF-EANEEDIAAVCLSAIRELQRHCPALPTEDVVIEHGGGEGHAIVLHERNNHGEVVIRLDTCKTFWSQYAYQAAHEMCHVHCSFRCGPIQNQWFEETVCETASLFCLRAMAHTWKTEPPYRHWADYATSLLEYTEDVISKRIYKAELINKGLPQFYRDHETELRANACGRELNGAIALALLPYLEEMPKHWAAFHWLNATERPESEPFVDYLTRWEQNTPAEYKATVQGVQALFGV 247 IR+ G+ + +DI AV SA + +H +L E I E I L +RN GE++++L+T FW QYAYQ AHE CH+ C F+ G +N WFEET+CE AS+F L++MA TWKT PPY +W Y++++ Y D+ K + L +Y+ + L NA R +NG +A LL E P+HWA+ ++N + + PF +YL W + +P ++ + + G+ Sbjct: 34 IRLDQKGWGNGSPKDIEAVLYSACDSIHKHFSSL-EEKEPIRVISDESGPITLFKRNLRGEIIVKLNTGDRFWCQYAYQMAHEFCHILCGFKNGSRRNLWFEETLCEMASMFALKSMAETWKTHPPYANWKSYSSAIENYLNDIELKNRLSS---GTSLKNYYKKNAKTLAENATNRPMNGKVAAELLVAFETNPEHWASIRYINQGKAKKDIPFKEYLKNWLEVSPKKHHIFIYSIARKLGI 272
BLAST of NO10G01260 vs. NCBI_GenBank
Match: SMF11479.1 (hypothetical protein SAMN02745746_01410 [Pseudogulbenkiania subflava DSM 22618]) HSP 1 Score: 169.5 bits (428), Expect = 2.800e-38 Identity = 89/250 (35.60%), Postives = 137/250 (54.80%), Query Frame = 0 Query: 4 SIRVKADGF-EANEEDIAAVCLSAIRELQRHCPALPTEDVVIEHGGGEGHAIVLHERNNHGEVVIRLDTCKTFWSQYAYQAAHEMCHVHCSFRCG------PIQNQWFEETVCETASLFCLRAMAHTWKTEPPYRHWADYATSLLEYTEDVISKRIYKAELINKGLPQFYRDHETELRANACGRELNGAIALALLPYLEEMPKHWAAFHWLNATERPESEPFVDYLTRWEQNTPAEYKATVQGVQALFGV 247 +IRV+ + + A+ ++ AV SA EL PA T +V+ H EG+ + E+ GE ++RL WSQ+ YQ AHE+CH+ ++ NQWFEET+CETASL+ L++MA TW+T PY +W DYA ++ +Y E ++ ++ L + R++E +LR++ R+ N +A LLP E+ P+ WA H+LN ++ YL W N PAE+K + V AL G+ Sbjct: 39 TIRVEGEDWGRADRAEVEAVLYSAADELLNRFPAKVTAPIVVTH--VEGNPVTEFEKGPDGEYLVRLSAKDRRWSQFVYQFAHELCHIMSNYEANVGAENTTKYNQWFEETLCETASLYALKSMAVTWETSAPYPNWRDYAPAMRDYAEQ-FTREEHRQLPAGTTLAAWLRENEGKLRSDPYLRDKNEVVASLLLPLFEKNPEEWATLHYLNLDSADATDTLKQYLQHWYGNAPAEHKKFIFDVLALLGI 285
BLAST of NO10G01260 vs. NCBI_GenBank
Match: WP_093066926.1 (hypothetical protein [Thiothrix caldifontis] >SEA38856.1 hypothetical protein SAMN05660964_01469 [Thiothrix caldifontis]) HSP 1 Score: 161.8 bits (408), Expect = 5.900e-36 Identity = 78/247 (31.58%), Postives = 140/247 (56.68%), Query Frame = 0 Query: 2 PGSIRVKADGFEANEEDIAAVCLSAIRELQRHCPALPTEDVVIEHGGGEGHAIVLHERNNHGEVVIRLDTCKTFWSQYAYQAAHEMCHVHCSFRCGP---IQNQWFEETVCETASLFCLRAMAHTWKTEPPYRHWADYATSLLEYTEDVISKRIYKAELINKGLPQFYRDHETELRAN--ACGRELNGAIALALLPYLEEMPKHWAAFHWLNATERPESEPFVDYLTRWEQNTPAEYKATVQGVQAL 244 P ++V+++ +AN +D+ AV S + + + ++++ + + I L+E++ + E ++ L+ +W+Q AYQ +HEMCH+ ++ P + QW EE++CE SLF L MA W T+PPY HW +YA+ EY +D+ K+ ++ + LP++Y+ + L A+ A GR+LN +A LLP E P+ W ++LN + + + YLT WE N P++++ TV+ +Q + Sbjct: 28 PAQVQVESEWGDANPDDVKAVLNSVVEAISPYMAGRTFGNIIVRN--DKSGPISLYEKSPNDEYIVLLNVNGRYWAQLAYQFSHEMCHLMSNYDLAPNNITRQQWLEESLCEAFSLFALEKMAQQWATDPPYPHWQEYASKFTEYQQDMF-KQAHRQLPKSMKLPKWYQAYAKTLSADPYAQGRDLNELVANQLLPIFTEQPEAWTTLNYLNLGDDSDDKSLRKYLTDWENNLPSKWQPTVEEIQQI 271
BLAST of NO10G01260 vs. NCBI_GenBank
Match: OQX15438.1 (hypothetical protein BWK73_06770 [Thiothrix lacustris]) HSP 1 Score: 157.9 bits (398), Expect = 8.500e-35 Identity = 82/247 (33.20%), Postives = 134/247 (54.25%), Query Frame = 0 Query: 2 PGSIRVKADGFEANEEDIAAVCLSAIRELQRHCPALPTEDVVIEHGGGEGHAIVLHERNNHGEVVIRLDTCKTFWSQYAYQAAHEMCHVHCSFRCGP---IQNQWFEETVCETASLFCLRAMAHTWKTEPPYRHWADYATSLLEYTEDVISKRIYKAELINKGLPQFYRDHETELRAN--ACGRELNGAIALALLPYLEEMPKHWAAFHWLNATERPESEPFVDYLTRWEQNTPAEYKATVQGVQAL 244 P I+V+++ EAN +DI V S I + + +V++++ I L+E+ + +I L+ +W+Q +YQ +HEMCH+ ++ P + QWFEE++CE SLF L MA W+T PPY HW +YA EY +D+ K+ ++ + LP++Y+ + L A+ A GR+LN +A LLP E P+ W ++LN + + YLT WE N P ++ T+ GV+ + Sbjct: 25 PAQIKVESEWGEANPDDIKTVLTSVIEVIAPYMAGRTFGEVIVKN--DPSGPISLYEKGANDAYIIMLNVGGRYWAQLSYQFSHEMCHLMSNYDLAPNNVTRQQWFEESLCEAFSLFALEKMAEHWETHPPYPHWQEYAPKFREYQQDMF-KQTHRQLPKSMKLPKWYQAYAKTLSADPYAQGRDLNELVANQLLPIFAEKPETWITLNYLNLGDDSGDKTLDKYLTDWENNVPLPWQPTITGVKQI 268
BLAST of NO10G01260 vs. NCBI_GenBank
Match: WP_062905675.1 (hypothetical protein [Vibrio parahaemolyticus] >KYY16766.1 hypothetical protein AWJ16_17070 [Vibrio parahaemolyticus]) HSP 1 Score: 155.2 bits (391), Expect = 5.500e-34 Identity = 80/233 (34.33%), Postives = 120/233 (51.50%), Query Frame = 0 Query: 13 EANEEDIAAVCLSAIRELQRHCPALPTEDVVIEHGGGEGHAIVLHERNNHGEVVIRLDTCKTFWSQYAYQAAHEMCHVHCSFRCGPIQNQWFEETVCETASLFCLRAMAHTWKTEPPYRHWADYATSLLEYTEDVISKRIYKAELINKGLPQFYRDHETELRANACGRELNGAIALALLPYLEEMPKHWAAFHWLNATERPESEPFVDYLTRWEQNTPAEYKATVQGVQALFG 246 EA D+ V S I + ++ + DV++ H G VL++R +GE + L + FW+Q++YQ AHE CH+ ++ G ++ +WFEET+CE ASLF LR M+ W+ PPY +W DY+T+L EY ++ I YK ++R + L + RE+N IA+ LLP EE PK W A + N +S+ W P E K V + +FG Sbjct: 12 EAQVVDLKKVLESVISVIDKYFESNADSDVIVTHSEDYGPR-VLYDRAPNGEYQVLLSSKHRFWAQHSYQFAHEYCHIRTNYMSGSVKTKWFEETICELASLFTLRRMSEVWQVSPPYENWRDYSTALSEYADNRIGDDKYKMP-NGVEFQDWFRANLNHLENDQYIREINTTIAIKLLPMFEENPKLWLAMSYFNNWVASDSDDIYQCFDSWLSVIPVELKPAVTSLVDVFG 242
BLAST of NO10G01260 vs. NCBI_GenBank
Match: PCJ10992.1 (hypothetical protein COB10_10300 [Planctomycetes bacterium]) HSP 1 Score: 152.5 bits (384), Expect = 3.600e-33 Identity = 83/233 (35.62%), Postives = 119/233 (51.07%), Query Frame = 0 Query: 13 EANEEDIAAVCLSAIRELQRHCPALPTEDVVIEHGGGEGHAIVLHERNNHGEVVIRLDTCKTFWSQYAYQAAHEMCHVHCSFRCGPIQNQWFEETVCETASLFCLRAMAHTWKTEPPYRHWADYATSLLEYTEDVISKRIYKAELINKGLPQFYRDHETELRANACGRELNGAIALALLPYLEEMPKHWAAFHWLNATERPESEPFVDYLTRWEQNTPAEYKATVQGVQALFG 246 +A+ D+ AV + A L + + + +E GG VLH R++ G + +RL W+Q AYQ AHEM H+ C F P + W EET+CE ASLF LR MA WK +PPY +WA YA L +Y + +I + + + +Y+ H E+ + RE IA+A LP LE+ P+ W A +LN EP L RW+ N P + + V V +FG Sbjct: 44 DASVADVKAVLVCAAEPLWKAAGSPQLPIIRVEASGG---PXVLHRRDDDGAIRVRLAVEGRHWAQIAYQFAHEMGHILCGFDEDPEPHHWLEETLCEAASLFVLRKMARRWKQDPPYPNWASYAPHLEQYVQKLIERGALPE---GETIEGWYKKHRVEVESTPLKRERLLVIAVAWLPLLEKDPRAWRAVRYLNHGVPEPEEPLAGALRRWKSNCPEKDRIQVDRVAQMFG 270 The following BLAST results are available for this feature:
BLAST of NO10G01260 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO10G01260 ID=NO10G01260|Name=NO10G01260|organism=Nannochloropsis oceanica|type=gene|length=2203bpback to top protein sequence of NO10G01260.1 >NO10G01260.1-protein ID=NO10G01260.1-protein|Name=NO10G01260.1|organism=Nannochloropsis oceanica|type=polypeptide|length=525bpback to top Synonyms
Publications
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