NO10G01240, NO10G01240 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO10G01240 vs. NCBI_GenBank
Match: EWM25391.1 (ribokinase [Nannochloropsis gaditana]) HSP 1 Score: 356.7 bits (914), Expect = 6.900e-95 Identity = 182/272 (66.91%), Postives = 217/272 (79.78%), Query Frame = 0 Query: 8 VVCVGSLNIDLLCYLGGQFPSPGETVHGLRFSTCLGGKGGNQAVMAARLGAPTAMVGRVGNDLYGNTIREAFEGNGVDTRYLLKTADGIATGTAHILVNGEGQNMIIVIAGANGQLTPADVQAAEDVIAQAAVLMVQMEIPTETSFEALRLAKAHDVFSILNPAPAPDGRLSQEFLAFASLVCPNETELAILTQLPVGTIPEVQAAAHRLREMGAASVLVTLGAQGALLMTAENAAQGGQLIPSKRVERVVDTSGAGDCYIGSLAAFLSRGV 280 +VCVGSLN+DL CYL +FP PG T+ G +TC GGKGGNQAVMAARLGAPT+MVG VG D++GNT+REA +GV + L + ADG +TGTA ILVNG G+NMII+ AGANG+LTP DVQAAE IA AAV+MVQ+E+P E + EALRLA+AH+VFSILNPAPAP G L QE L+ ASLVCPNETELA+LTQ P T+ E++AAAHRLR MGAA VLVTLG +G LL+T ++ L PS +VE VVDTSGAGDC+IGSLAA+LS G+ Sbjct: 9 IVCVGSLNVDLFCYLHDKFPEPGRTLQGSHSATCCGGKGGNQAVMAARLGAPTSMVGMVGRDVFGNTLREALIHDGVSIKPLREAADGTSTGTAQILVNGRGENMIIITAGANGKLTPTDVQAAESDIAAAAVVMVQLEVPLEATREALRLARAHEVFSILNPAPAPRGGLDQELLSLASLVCPNETELAVLTQKPAKTLSEIEAAAHRLRGMGAARVLVTLGERGTLLVTEKDGEDHVLLTPSPKVEMVVDTSGAGDCFIGSLAAYLSSGM 280
BLAST of NO10G01240 vs. NCBI_GenBank
Match: XP_019623190.1 (PREDICTED: ribokinase-like isoform X1 [Branchiostoma belcheri]) HSP 1 Score: 230.3 bits (586), Expect = 7.400e-57 Identity = 131/269 (48.70%), Postives = 180/269 (66.91%), Query Frame = 0 Query: 8 VVCVGSLNIDLLCYLGGQFPSPGETVHGLRFSTCLGGKGGNQAVMAARLGAPTAMVGRVGNDLYGNTIREAFEGNGVDTRYLLKTADGIATGTAHILVNGEGQNMIIVIAGANGQLTPADVQAAEDVIAQAAVLMVQMEIPTETSFEALRLAKAHDVFSILNPAPAPDGRLSQEFLAFASLVCPNETELAILTQLPVGTIPEVQAAAHRLREMGAASVLVTLGAQGALLMTAENAAQGGQLIPSKRVERVVDTSGAGDCYIGSLAAFLS 277 VV VGS N+DL+ Y+ + P PGET+HG +FS GGKG NQ VMAARLGA TAMV +VG+D++G+ + F+ NGV+ + T + +TG A I VN +GQN II+++GAN +LT ADV+ E VI QA VL+ Q+EI ETS EALR+ K H V +ILNPAPA + L E + + CPNETE ILT LPV T E + AA L + G V++TLG +G L + + ++ G +P+++V VDT+GAGD ++GSLA +++ Sbjct: 6 VVVVGSCNMDLISYV-SRLPKPGETIHGNKFSLGFGGKGANQCVMAARLGAATAMVAKVGDDVFGSNFIQNFKDNGVNVDNVEVTKEA-STGVAPIAVNEDGQNSIIIVSGANLKLTAADVKEHESVITQAKVLICQLEIQPETSLEALRIGKQHGVTTILNPAPA-EASLDPELYKLSDIFCPNETEAEILTGLPVTTAEEAEKAADVLLDKGCEKVIITLGEKGCLCKS--SVSEKGIHVPARKVS-PVDTTGAGDAFVGSLAYYMA 268
BLAST of NO10G01240 vs. NCBI_GenBank
Match: WP_014431451.1 (ribokinase [Caldilinea aerophila] >BAL98209.1 ribokinase [Caldilinea aerophila DSM 14535 = NBRC 104270]) HSP 1 Score: 225.3 bits (573), Expect = 2.400e-55 Identity = 122/272 (44.85%), Postives = 181/272 (66.54%), Query Frame = 0 Query: 8 VVCVGSLNIDLLCYLGGQFPSPGETVHGLRFSTCLGGKGGNQAVMAARLGAPTAMVGRVGNDLYGNTIREAFEGNGVDTRYLLKTADGIATGTAHILVNGEGQNMIIVIAGANGQLTPADVQAAEDVIAQAAVLMVQMEIPTETSFEALRLAKAHDVFSILNPAPAPDGRLSQEFLAFASLVCPNETELAILTQLPVGTIPEVQAAAHRLREMGAASVLVTLGAQGALLMTAENAAQGGQLIPSKRVERVVDTSGAGDCYIGSLAAFLSRGV 280 + VGS+N+D+ Y+ +FP PGET+HG RF+T GGKG NQAVMAARLGA +MVGR+G+D++G+ +R E G+ T + ++ + G+++G A I ++ +GQN IIVI GANG +T DV+ A+ I A VL+ QME+P E + ALR+A+ V +I N AP + +E + + CPNE+E +LT +PV T+ + + AA + GA + L+TLGAQG L +TA+ + +P+ RV + VDT+GAGD ++GSLA FL+ G+ Sbjct: 6 ICVVGSINLDMNAYV-ERFPRPGETLHGRRFTTGYGGKGANQAVMAARLGAKVSMVGRIGDDIFGHDMRRNLESEGIRTDF-VRESKGVSSGVAVITIDEQGQNQIIVIPGANGLVTAVDVEEAQAAITGAQVLLCQMEVPMEANLAALRIARNAGVTTIFNSAPV-SSEVPEEVYQLSDIFCPNESEAELLTGVPVHTLDDARLAASMIVTRGARAALITLGAQGCLYVTADQE----EHVPAPRV-KAVDTTGAGDAFVGSLAHFLAAGL 269
BLAST of NO10G01240 vs. NCBI_GenBank
Match: XP_001742353.1 (hypothetical protein [Monosiga brevicollis MX1] >EDQ92591.1 predicted protein [Monosiga brevicollis MX1]) HSP 1 Score: 216.5 bits (550), Expect = 1.100e-52 Identity = 126/277 (45.49%), Postives = 174/277 (62.82%), Query Frame = 0 Query: 1 MMNRRCGVVCVGSLNIDLLCYLGGQFPSPGETVHGLRFSTCLGGKGGNQAVMAARLGAPTAMVGRVGNDLYGNTIREAFEGNGVDTRYLLKTADGIATGTAHILVNGEGQNMIIVIAGANGQLTPADVQAAEDVIAQAAVLMVQMEIPTETSFEALRLAKAHDVFSILNPAPAPDGRLSQEFLAFASLVCPNETELAILTQLPVGTIPEVQAAAHRLREMGAASVLVTLGAQGALLMTAENAAQGGQLIPSKRVERVVDTSGAGDCYIGSLAAFLSR 278 M + VV VGS N DL+ Y+ + P PGET+HG F GGKG NQ VM+A+LGA TAMV RVG+D++G E ++ GVD ++ + ++ +TG A I+V+ +GQN II++ GAN +LTPA V A +I A VL+VQ EIP E+S ALR+A+ V SI N AP + R S + + S+VC NETE + T + V T+ E + A+ L GA VL+TLG+QG L MT + Q P+ VE +DTSGAGDC+IG+LA +++ Sbjct: 1 MAEAKAEVVVVGSSNTDLIAYM-DRMPRPGETLHGTDFKQGFGGKGANQCVMSAKLGAQTAMVSRVGSDVFGKETIENYQRQGVDVQF-VSVSETASTGVAPIMVDSKGQNSIIIVPGANNELTPAMVDDARALIQSAKVLLVQNEIPLESSLAALRIAREAGVTSIFNIAPGIE-RPSTDCIVLPSIVCLNETETTLATGMEVNTLEEAKQASQHLLNTGAEGVLLTLGSQGCLYMTKDTCVQE----PAMTVE-AIDTSGAGDCFIGTLACSMAQ 269
BLAST of NO10G01240 vs. NCBI_GenBank
Match: WP_090754743.1 (ribokinase [Paracoccus chinensis] >SDL11402.1 ribokinase [Paracoccus chinensis]) HSP 1 Score: 214.9 bits (546), Expect = 3.200e-52 Identity = 128/271 (47.23%), Postives = 175/271 (64.58%), Query Frame = 0 Query: 8 VVCVGSLNIDLLCYLGGQFPSPGETVHGLRFSTCLGGKGGNQAVMAARLGAPTAMVGRVGNDLYGNTIREAFEGNGVDTRYLLKTADGIATGTAHILVNGEGQNMIIVIAGANGQLTPADVQAAEDVIAQAAVLMVQMEIPTETSFEALRLAKAHDVFSILNPAPAPDGRLSQEFLAFASLVCPNETELAILTQLPVGTIPEVQAAAHRLREMGAASVLVTLGAQGALLMTAENAAQGGQLIPSKRVERVVDTSGAGDCYIGSLAAFLSRG 279 + +GS N+DL+ + + P PGET+ G F+T GGKG NQAV AARLG+ MV RVG+D +G + G+D + + A G A G A I V+ G+N+I+++AGANG LTPADV AA + +A ++++Q+E+P ET + A++LA+ V +ILNPAPA G L L + CPNETELA+LT LPV T E+ AAA L G +V+VTLGA+GA L+TA+ G IP+ RV R VDT+GAGD +IG+ A FL+ G Sbjct: 5 IAVIGSNNVDLVTNV-PRMPGPGETLAGSHFATHFGGKGANQAVAAARLGSQVTMVTRVGDDSFGGDVLRNLADQGIDLTH-ARVAQGTANGVASIFVDPSGENVIVIVAGANGTLTPADVDAAAEDMATCDLILLQLEVPLETVYHAIKLAQRIGVPAILNPAPAAPG-LDLAQLHGLAWFCPNETELALLTGLPVTTEDEIAAAAQSLFAHGIGNVVVTLGARGARLVTAD----GVTSIPAIRV-RPVDTTGAGDAFIGAFAHFLAAG 267
BLAST of NO10G01240 vs. NCBI_GenBank
Match: WP_095639167.1 (ribokinase [Paracoccus sp. WN007] >PAU98485.1 ribokinase [Paracoccus sp. WN007]) HSP 1 Score: 214.9 bits (546), Expect = 3.200e-52 Identity = 127/271 (46.86%), Postives = 178/271 (65.68%), Query Frame = 0 Query: 8 VVCVGSLNIDLLCYLGGQFPSPGETVHGLRFSTCLGGKGGNQAVMAARLGAPTAMVGRVGNDLYGNTIREAFEGNGVDTRYLLKTADGIATGTAHILVNGEGQNMIIVIAGANGQLTPADVQAAEDVIAQAAVLMVQMEIPTETSFEALRLAKAHDVFSILNPAPAPDGRLSQEFLAFASLVCPNETELAILTQLPVGTIPEVQAAAHRLREMGAASVLVTLGAQGALLMTAENAAQGGQLIPSKRVERVVDTSGAGDCYIGSLAAFLSRG 279 + +GS N+DL+ + + P PGET+ G F+T GGKG NQAV AARLG+ MV RVG D +G + + +G+D + + + G A G A I V+ G+N+I+++AGANG L+PADV AA D +A+ ++++Q+E+P ET + A+R+A V +ILNPAPA G L L + CPNE+EL++LT LPV T E+ AAA L G A+V+VTLGA+GA L+T AQG + IP+ RV R VDT+GAGD +IG+ A FL+ G Sbjct: 5 IAVIGSNNVDLVTNV-PRMPGPGETLAGAHFATGFGGKGANQAVAAARLGSQVTMVTRVGEDSFGREVLQNLGSHGIDLAH-ARVSRGTANGVASIFVDPSGENVIVIVAGANGTLSPADVDAAADDLARCDLILLQLEVPLETVYHAIRVAARLGVPAILNPAPAAPG-LDLAQLKGLAWFCPNESELSMLTGLPVTTEEEIAAAAQGLLFHGIANVVVTLGARGARLVT----AQGVKAIPAIRV-RPVDTTGAGDAFIGAFAHFLAAG 267
BLAST of NO10G01240 vs. NCBI_GenBank
Match: WP_011688618.1 (ribokinase [Candidatus Solibacter usitatus] >ABJ87898.1 ribokinase [Candidatus Solibacter usitatus Ellin6076]) HSP 1 Score: 214.2 bits (544), Expect = 5.500e-52 Identity = 129/277 (46.57%), Postives = 168/277 (60.65%), Query Frame = 0 Query: 2 MNRRCGVVCVGSLNIDLLCYLGGQFPSPGETVHGLRFSTCLGGKGGNQAVMAARLGAPTAMVGRVGNDLYGNTIREAFEGNGVDTRYLLKTADGIATGTAHILVNGEGQNMIIVIAGANGQLTPADVQAAEDVIAQAAVLMVQMEIPTETSFEALRLAKAHDVFSILNPAPAPDGRLSQEFLAFASLVCPNETELAILTQLPVGTIPEVQAAAHRLREMGAASVLVTLGAQGALLMTAENAAQGGQLIPSKRVERVVDTSGAGDCYIGSLAAFLSRG 279 M R+ +V +GS NIDL+ Y QFP PGET+ G FS GGKG NQAV A GA AMV RVG+DL+G + F G+D R+++ TA G+++G A I V GQN I V+ GAN +L PADV AA DV+A A L++Q+EIPTET + ALR A+ + +ILNPAP L+Q +A A V PNETE L PV + + Q A +L + G V+VTLGA GALL T + G + + +DT+GAGD +IGS A F + G Sbjct: 1 MRRQPRIVVIGSANIDLVTYT-DQFPRPGETIFGREFSLGFGGKGANQAVAARLCGAEVAMVARVGDDLFGPANIQNFTSRGIDVRHVMTTA-GVSSGVAPIFVESSGQNRIWVVKGANDRLLPADVAAASDVLAGADFLVMQLEIPTETVYYALRFARERGIRTILNPAPGQALDLAQ--IASADYVIPNETEAEALAGTPVHALEDAQRCAQKLLDGGLRRVIVTLGANGALLATHD-----GMHHVAPFPVQPIDTTGAGDAFIGSFACFCAEG 268
BLAST of NO10G01240 vs. NCBI_GenBank
Match: WP_082839117.1 (ribokinase [Gemmata sp. SH-PL17] >AMV24307.1 Ribokinase [Gemmata sp. SH-PL17]) HSP 1 Score: 213.4 bits (542), Expect = 9.400e-52 Identity = 129/271 (47.60%), Postives = 164/271 (60.52%), Query Frame = 0 Query: 8 VVCVGSLNIDLLCYLGGQFPSPGETVHGLRFSTCLGGKGGNQAVMAARLGAPTAMVGRVGNDLYGNTIREAFEGNGVDTRYLLKTADGIATGTAHILVNGEGQNMIIVIAGANGQLTPADVQAAEDVIAQAAVLMVQMEIPTETSFEALRLAKAHDVFSILNPAPAPDGRLSQEFLAFASLVCPNETELAILTQLPVGTIPEVQAAAHRLREMGAASVLVTLGAQGALLMTAENAAQGGQLIPSKRVERVVDTSGAGDCYIGSLAAFLSRG 279 + VGS N+DL Y + P PGET+H RF+ GGKG NQAVMAARLGA +V RVGNDL+G + G+DTR + T DG+ TGTA I V+ G+N I V GANG L P DV A I A VL+ Q E+P ET+ A+R A V + NPAPA + E +++ CPNE E A+LT PV + E +AAA L GA +V+VTLGA+G L+ T +G +P+ VE VDT+GAGD +IGSLA FL+RG Sbjct: 6 ICVVGSANLDLNTYT-TRLPVPGETLHAHRFTMGYGGKGANQAVMAARLGADVVLVARVGNDLFGRDMLAHLRTEGIDTRRVTST-DGVPTGTAVITVDDAGRNTIAVTPGANGLLAPTDVDATRGAIESARVLVCQQEVPVETNLAAMRFAAGAGVPVVFNPAPA-STTIPAEAYRLSTVFCPNEHEAAVLTGKPVESPEEAEAAARELMARGAHNVVVTLGARGCLVAT----PRGMTALPAPAVE-AVDTTGAGDAFIGSLAFFLARG 268
BLAST of NO10G01240 vs. NCBI_GenBank
Match: WP_070267546.1 (ribokinase [Duganella sp. HH101] >OFA06428.1 ribokinase [Duganella sp. HH101]) HSP 1 Score: 213.0 bits (541), Expect = 1.200e-51 Identity = 128/280 (45.71%), Postives = 176/280 (62.86%), Query Frame = 0 Query: 8 VVCVGSLNIDLLCYLGGQFPSPGETVHGLRFSTCLGGKGGNQAVMAARLGAPTAMVGRVGNDLYGNTIREAFEGNGVDTRYLLKTADGIATGTAHILVNGEGQNMIIVIAGANGQLTPADVQAAEDVIAQAAVLMVQMEIPTETSFEALRLAKAHDVFSILNPAPAPDGRLSQEFLAFASLVCPNETELAILTQLPVGTIPEVQAAAHRLREMGAASVLVTLGAQGALLMTAENAAQGGQLIPSKRVERVVDTSGAGDCYIGSLAAFLSRGVRQREERAF 288 VV VGSLN+DL+ + + P+ GET+HG ++T GGKG NQAV ARLG P A+VG+ G D YG+ + A NGVD R++ +T D ATG A I+V+ +GQN I++ AGANG L PADV AA ++IA A +L+VQ+E+P +ALRLA A V ++LNPAPA L F ++ PNE+E ++LT + V +P AA +LR GA VLVTL +G +L+ G + +P++ V VDT+ AGD +IG+LA L G+ E AF Sbjct: 15 VVVVGSLNMDLV-FRVPRVPAAGETLHGHGYTTSPGGKGANQAVACARLGCPVALVGQAGRDGYGDDLCAALSANGVDIRHVRRTGD--ATGVAMIMVDDQGQNRIVLAAGANGALRPADVDAAGELIAGAGLLIVQLEVPAAAVLQALRLAAAAGVPALLNPAPAQ--ALPDPFWPLIDILVPNESEASLLTGIAVTDVPSAYQAAQQLRARGARRVLVTLSDKGVVLLD----ELGPRHLPARAVS-AVDTTAAGDTFIGALATGLHEGLTLDEAAAF 284
BLAST of NO10G01240 vs. NCBI_GenBank
Match: XP_007665247.1 (PREDICTED: ribokinase [Ornithorhynchus anatinus]) HSP 1 Score: 212.2 bits (539), Expect = 2.100e-51 Identity = 123/269 (45.72%), Postives = 175/269 (65.06%), Query Frame = 0 Query: 8 VVCVGSLNIDLLCYLGGQFPSPGETVHGLRFSTCLGGKGGNQAVMAARLGAPTAMVGRVGNDLYGNTIREAFEGNGVDTRYLLKTADGIATGTAHILVNGEGQNMIIVIAGANGQLTPADVQAAEDVIAQAAVLMVQMEIPTETSFEALRLAKAHDVFSILNPAPAPDGRLSQEFLAFASLVCPNETELAILTQLPVGTIPEVQAAAHRLREMGAASVLVTLGAQGALLMTAENAAQGGQLIPSKRVERVVDTSGAGDCYIGSLAAFLS 277 VV VGS DL+ L + P PGET+HG +F GGKG NQ V AARLGA T+MV +VG D +GN E F+ NG+ T + +T D +TGTA ILVN EGQN+I+++AGAN L D++ A DVI++A V++ Q+EI TS EAL++A+A V ++ NPAPA L +F + + C NETE ILT L VG+ + A L E G V++T+GA+G +L++ E+ + IP+++V + VDT+GAGD ++G+LA +L+ Sbjct: 9 VVVVGSCMTDLVS-LTARLPKPGETIHGHKFFIGFGGKGANQCVQAARLGAETSMVCKVGKDSFGNDYLENFKQNGISTEFAHQTKDA-STGTASILVNNEGQNVIVIVAGANLLLDFQDLKKAADVISKAKVMVCQLEIAPATSLEALKMARASGVKTLFNPAPA-IADLDPQFYTLSDVFCCNETETEILTGLQVGSPTDAGKAGSVLLERGCRVVIITMGAEGCVLVSGEDPVP--KHIPTEKVIKPVDTTGAGDSFVGALAFYLA 272 The following BLAST results are available for this feature:
BLAST of NO10G01240 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
The following polypeptide feature(s) derives from this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO10G01240 ID=NO10G01240|Name=NO10G01240|organism=Nannochloropsis oceanica|type=gene|length=1882bpback to top protein sequence of NO10G01240.4 >NO10G01240.4-protein ID=NO10G01240.4-protein|Name=NO10G01240.4|organism=Nannochloropsis oceanica|type=polypeptide|length=268bpback to top protein sequence of NO10G01240.3 >NO10G01240.3-protein ID=NO10G01240.3-protein|Name=NO10G01240.3|organism=Nannochloropsis oceanica|type=polypeptide|length=289bpback to top protein sequence of NO10G01240.2 >NO10G01240.2-protein ID=NO10G01240.2-protein|Name=NO10G01240.2|organism=Nannochloropsis oceanica|type=polypeptide|length=301bpback to top protein sequence of NO10G01240.1 >NO10G01240.1-protein ID=NO10G01240.1-protein|Name=NO10G01240.1|organism=Nannochloropsis oceanica|type=polypeptide|length=322bpback to top Synonyms
Publications
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