NO10G01160, NO10G01160 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO10G01160 vs. NCBI_GenBank
Match: EWM25383.1 (conserved unknown protein [Nannochloropsis gaditana]) HSP 1 Score: 334.3 bits (856), Expect = 3.200e-88 Identity = 179/255 (70.20%), Postives = 202/255 (79.22%), Query Frame = 0 Query: 1 MALPHRTPLILVTSLLAMVAVAHGFFLRPSTLRVSTIMTAH---QQLEHSPATGLDRKAALQQGVVLTSVFLFVAGASPLPVRAKDNKPAALSFEECVSKLLLSKKVLQPVAKYIKIGQYDPARTNIKYVTNQFRLKKAMERIVLLAFEKDVSQSKLDEAAEVTAVIDNTLSQLDSSVYTQIFIPTDGEISPDALKYQKQAFEFYDTVLDSIDKVLSLAGAEDISAAQKLVDGTPLPSFLFKQFADGQTFRPPTP 253 M++ + +V +L + A+ GFFL P T +T+M A Q LDR AALQQG L+S FLF+ + P +AK++ PAA SFEEC+S+LLLS+KVL+PV KYIKIGQYDPARTNIKYVTNQFRLKKAMER+VLLAFEKD+ QSKLD+AAEVTAVIDNTLSQLDSSVYTQIFIPTDGEISPDALKYQKQAFEFYDT LDSIDKVLSLA ED+ AQKLVDGT LP FLFK FADGQTFRPPTP Sbjct: 1 MSIRRFSTFFVVIWVLILAAITQGFFLAPCTRSATTLMQAQASKQSQNRVDGGKLDRLAALQQGAFLSSAFLFLTASLSSPAQAKNSAPAA-SFEECISRLLLSRKVLEPVQKYIKIGQYDPARTNIKYVTNQFRLKKAMERVVLLAFEKDLPQSKLDDAAEVTAVIDNTLSQLDSSVYTQIFIPTDGEISPDALKYQKQAFEFYDTTLDSIDKVLSLASPEDLKEAQKLVDGTSLPPFLFKSFADGQTFRPPTP 254
BLAST of NO10G01160 vs. NCBI_GenBank
Match: CBJ29602.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 111.7 bits (278), Expect = 3.400e-21 Identity = 63/167 (37.72%), Postives = 97/167 (58.08%), Query Frame = 0 Query: 78 PVRAKDNKPAALSFEECVSKLLLSKKVLQPVAKYIKIGQYDPARTNIKYVTNQFRLKKAMERIVLLAFEKDVSQSKLDEAAEVTAVIDNTLSQLDSSVYTQIFIP--TDGEISPDALKYQKQAFEFYDTVLDSIDKVLSLAGAEDISAAQKLVDG--TPLPSFLFKQ 241 P +K + AA S EE + +++ K+V +P +Y+K Q+D ARTN Y+T F LKK ++ ++ A + +++A ++ ++ + DSSVYT IFIP DG + P A KY KQA+ FYD + +D + L E +AA+KL+ PLPSFLFK+ Sbjct: 91 PALSKRAEAAAQSLEELEADIMICKEVFKPTLQYLKAEQFDAARTNTNYITRFFNLKKKIDSFIVQASDVVEDPDTMEKAFDMAQEVEALFTNFDSSVYTIIFIPADADGVLPPGAEKYLKQAYGFYDDINKVLDFYIDLVPPETKAAAEKLLPAKRAPLPSFLFKE 257
BLAST of NO10G01160 vs. NCBI_GenBank
Match: XP_005705617.1 (hypothetical protein Gasu_34880 [Galdieria sulphuraria] >EME29097.1 hypothetical protein Gasu_34880 [Galdieria sulphuraria]) HSP 1 Score: 88.6 bits (218), Expect = 3.100e-14 Identity = 59/165 (35.76%), Postives = 86/165 (52.12%), Query Frame = 0 Query: 62 VVLTSVFLFVAGASPLPVRAKDNKPAALSFEECVSKLLLSKKVLQPVAKYIKIGQYDPARTNIKYVTNQFRLKKAMERIVLLAFEKDVSQSKLDEAAEVTAVIDNTLSQLDSSVYTQIFIPTDGE-ISPDALKYQKQAFEFYDTVLDSIDKVLSLAGAEDISAAQ 226 V L V+ F ASP+ D + A + +C +++L PV Y+ G +D ART++ Y T RLK M+ + L E + D+A E T IDN +SQLD+S YT FIP+D ++ KYQ QA +FY V+ +D L L+ E++ AQ Sbjct: 79 VTLIGVYCF---ASPVFAYNADMESALVPIIQC-------RQLLDPVEGYLNNGNWDKARTSVNYCTRVLRLKTNMKTVTNLLSEDTLK----DKAIEYTVDIDNAMSQLDASAYTPNFIPSDARGVTDQNQKYQMQAKDFYHKVIQELDAFLDLSPGEELKNAQ 229
BLAST of NO10G01160 vs. NCBI_GenBank
Match: CEM20016.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 84.0 bits (206), Expect = 7.500e-13 Identity = 46/146 (31.51%), Postives = 78/146 (53.42%), Query Frame = 0 Query: 93 ECVSKLLLSKKVLQPVAKYIKIGQYDPARTNIKYVTNQFRLKKAMERIVLLAFEKDVSQSKLDEAAEVTAVIDNTLSQLDSSVYTQIF-IPTDGEISPDALKYQKQAFEFYDTVLDSIDKVLSLAGAEDISAAQKLVDGTPLPSFL 238 E ++ + + ++ + PV YI GQ+D AR+N+ Y T RL ++++ D+ + E E+ + NT+S LDSS+YT IF T KYQK+ + +YD + +D+ + L +E ++ + +L D PLP FL Sbjct: 54 EAIATVFVCRRAMDPVKGYIAEGQWDRARSNVNYCTRVLRLNSVLKKV-----SNDIDEV---EGLEIAGDLLNTMSDLDSSIYTPIFAFDTASGTQRSFAKYQKECYRYYDESVALLDRFIQLLPSELLAESSQLADARPLPKFL 191
BLAST of NO10G01160 vs. NCBI_GenBank
Match: XP_005535411.1 (hypothetical protein CYME_CMD034C [Cyanidioschyzon merolae strain 10D] >BAM79125.1 hypothetical protein CYME_CMD034C [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 75.9 bits (185), Expect = 2.000e-10 Identity = 38/134 (28.36%), Postives = 73/134 (54.48%), Query Frame = 0 Query: 86 PAALSFEECVSKLLLSKKVLQPVAKYIKIGQYDPARTNIKYVTNQFRLKKAMERIVLLAFEKDVSQSKLDEAAEVTAVIDNTLSQLDSSVYTQIFIPTDGEISPDALKYQKQAFEFYDTVLDSIDKVLSLAGAE 220 P L + V +++ +++L+P+ +Y++ G +D AR+N+ Y T RL A+ + + K + A V++ + N ++QLD+++YT IF+ +D +SP KY +A + + +D LSL +E Sbjct: 84 PYDLGTDRGVQAVMVCRELLEPIPRYVESGSWDKARSNVNYCTRTLRLHTALRAVTDRLLTPEYDLEKHESAMRVSSDLPNVMTQLDATLYTPIFMASDQGVSPAQRKYGDEALGYLEQAKQMLDHYLSLLPSE 217
BLAST of NO10G01160 vs. NCBI_GenBank
Match: OSX69233.1 (hypothetical protein BU14_1714s0002 [Porphyra umbilicalis]) HSP 1 Score: 75.9 bits (185), Expect = 2.000e-10 Identity = 49/130 (37.69%), Postives = 71/130 (54.62%), Query Frame = 0 Query: 90 SFEECVSKLLLSKKVLQPVAKYIKIGQYDPARTNIKYVTNQFRLKKAMERIVLLAFEKDVSQSKLDEAAEVTAVIDNTLSQLDSSVYTQIFIPTD-GEISPDALKYQKQAFEFYDTVLDSIDKVLSLAGA 219 S +E ++ L+ + L P+ Y+K G++D ARTN+ Y T RL + R A D LD ++V N +QLD+S YT FIP D GEI +A KY +Q F D V +D++L+LAG+ Sbjct: 89 SLDEPLTSLVQCRAALPPIRGYLKAGKWDKARTNVNYCTRVLRLSTNI-RTYATALGGDAYYDALDVLSDVM----NLTTQLDASAYTAGFIPADEGEIPLEAKKYMEQGLAFLDEVEGLMDQLLALAGS 213 The following BLAST results are available for this feature:
BLAST of NO10G01160 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 6
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO10G01160 ID=NO10G01160|Name=NO10G01160|organism=Nannochloropsis oceanica|type=gene|length=985bpback to top protein sequence of NO10G01160.1 >NO10G01160.1-protein ID=NO10G01160.1-protein|Name=NO10G01160.1|organism=Nannochloropsis oceanica|type=polypeptide|length=253bpback to top Synonyms
Publications
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