NO10G01100, NO10G01100 (gene) Nannochloropsis oceanica

Overview
NameNO10G01100
Unique NameNO10G01100
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2336
Alignment locationchr10:332145..334480 +

Link to JBrowse

Properties
Property NameValue
DescriptionP-loop containing nucleoside triphosphate hydrolases superfamily protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:332145..334480 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR003959ATPase_AAA_core
IPR003593AAA+_ATPase
Homology
BLAST of NO10G01100 vs. NCBI_GenBank
Match: XP_008380652.2 (PREDICTED: pachytene checkpoint protein 2 homolog [Malus domestica])

HSP 1 Score: 241.1 bits (614), Expect = 7.500e-60
Identity = 140/334 (41.92%), Postives = 197/334 (58.98%), Query Frame = 0
Query:  182 PVAFTSYVCPCPELVNVWESIHVAPSTKQALLSLAESSMLFSNAGVDPTLVSGNRLMLLYGAPGTGKTSLSRGLAQKLAIRHGESFAAVELLSVNAHALLSKFFGESSSLVGRMFGSVREKVAEEKTTLFVLAIDEVETMCSSRSQALSKGTNEPSDAVRVVNAVLTEMDRLKAFRNVLTVATSNVTQALDEAFLDRCDLKLHVGLPRPEGRYAILRSALVELMRCGVIIPRMHLPERVELLPSLAAATYSTSLPPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEGMSGRGLRKLPLLAHSLMAAPRTVGLDVFLGAMDEAVRQGRIE 516
            P  F  ++ P  E   +WES+      KQ LL  A S++LF+  GV+P LVS NR++LL+G PGTGKTSL + LAQKL+IR    +   +L+ VNAH+L SK+F ES  LV ++F  ++E V EE   +FVL IDEVE++ ++R  ALS   +EPSD++RVVNA+LT++D+LK+  NV+ + TSN+T A+D AF+DR D+K +VG P  + RY ILRS L EL+R G++    HL +   +LP+ A+     ++P                                   EG+SGR LRKLP LAH+ +A P       FL  M +  R+ R E
Sbjct:   74 PSTFNEWILPAKEFDGMWESLIYESGLKQRLLRYAASALLFTEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFNSRYPQCQLIEVNAHSLFSKWFSESGKLVAKLFSKIQEMVEEENNLVFVL-IDEVESLAAARKAALS--GSEPSDSIRVVNALLTQLDKLKSAPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLHELIRTGIL---SHLEDCESMLPNFASLKEKLNMP-------------EVQDAQTPLHLCKQLFETAEACEGLSGRSLRKLPFLAHAALANPYGCDPSKFLSTMTDTARRERSE 388          
BLAST of NO10G01100 vs. NCBI_GenBank
Match: XP_004501872.1 (PREDICTED: pachytene checkpoint protein 2 homolog [Cicer arietinum])

HSP 1 Score: 238.4 bits (607), Expect = 4.900e-59
Identity = 166/464 (35.78%), Postives = 238/464 (51.29%), Query Frame = 0
Query:   54 KIDVHIEARQAITSAVLPSDIKKRVLSFLQSHVRVYRLGPLGDFASLD-PYLGEHVQCIVITELGNTGQ-ETAVSSWRALSHVYVYAVFGGQHVGGTDFALEAXXXXXXXXXXXXXXXXXXXXXXXXXWCPVAFTSYVCPCPELVNVWESIHVAPSTKQALLSLAESSMLFSNAGVDPTLVSGNRLMLLYGAPGTGKTSLSRGLAQKLAIRHGESFAAVELLSVNAHALLSKFFGESSSLVGRMFGSVREKVAEEKTTLFVLAIDEVETMCSSRSQALSKGTNEPSDAVRVVNAVLTEMDRLKAFRNVLTVATSNVTQALDEAFLDRCDLKLHVGLPRPEGRYAILRSALVELMRCGVIIPRMHLPERVELLPSLAAATYSTSLPPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEGMSGRGLRKLPLLAHSLMAAPRTVGLDVFLGAMDEAVRQGRIE 516
            K+ V +E     +S    +D++  V   L+     Y  GP+     LD P+L ++VQ I I + G   Q +  +  W+    V+V+ +   +     D + +                              +F  ++ P  E   +WES+      KQ LL  A S++LF+   VDP LVS NR++LL+G PGTGKTSL + LAQKL+IR    +   +L+ VNAH+L SK+F ES  LV ++F  ++E V EE   +FVL IDEVE++ ++R  ALS   +EPSD++RVVNA+LT+MD+LK+  NV+ + TSN+T A+D AF+DR D+K +VG P  + RY ILRS L ELMR G++         V  LP+ A+A    + P                                   EGMSGR LRKLP LAH+ +A P       FL  M E  ++ R E
Sbjct:   34 KVLVPVEVCLKPSSTASINDVRSAVEGMLEKRSLSYNGGPIP--VPLDIPFLADNVQRICICDTGEGMQNDEVLLFWQVKPVVHVFQL--SEEGPCEDISSDGQSS--------------------------SFNEWILPAKEFDGMWESLIYESGLKQRLLRYAASALLFTEKAVDPFLVSWNRIILLHGPPGTGKTSLCKALAQKLSIRFSARYPQSQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEESNLVFVL-IDEVESLAAARKAALS--GSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLQELMRTGILTSSEDCKNIV--LPNYASAKPRLNAP-------------DFHEGTTSMQLFKQLVETAEACEGMSGRSLRKLPFLAHAALANPFECNPIKFLCTMIETAKRERSE 449          
BLAST of NO10G01100 vs. NCBI_GenBank
Match: XP_006852366.1 (pachytene checkpoint protein 2 homolog isoform X1 [Amborella trichopoda] >ERN13833.1 hypothetical protein AMTR_s00049p00222420 [Amborella trichopoda])

HSP 1 Score: 237.7 bits (605), Expect = 8.300e-59
Identity = 163/464 (35.13%), Postives = 241/464 (51.94%), Query Frame = 0
Query:   53 KKIDVHIEARQAITSAVLPSDIKKRVLSFLQSHVRVYRLGPLGDFASLDPYLGEHVQCIVITELGNTGQETAV-SSWRALSHVYVYAVF---GGQHVGGTDFALEAXXXXXXXXXXXXXXXXXXXXXXXXXWCPVAFTSYVCPCPELVNVWESIHVAPSTKQALLSLAESSMLFSNAGVDPTLVSGNRLMLLYGAPGTGKTSLSRGLAQKLAIRHGESFAAVELLSVNAHALLSKFFGESSSLVGRMFGSVREKVAEEKTTLFVLAIDEVETMCSSRSQALSKGTNEPSDAVRVVNAVLTEMDRLKAFRNVLTVATSNVTQALDEAFLDRCDLKLHVGLPRPEGRYAILRSALVELMRCGVIIPRMHLPERVEL-LPSLAAATYSTSLPPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEGMSGRGLRKLPLLAHSLMAAPRTVGLDVFLGAMDEAVRQ 512
            +K+ V +E     +SA    D++  V   L+     Y  GP+      D +L E+VQ I I    +      +   W+    V+VY +     G+ + G D +                                +F  +  P  E   +WES+      KQ LL    S++LF+  GV+P LVS NR++LL+G PGTGKTSL + LAQKL+IR    ++  +L+ +NAH+L SK+F ES  LVG++F  ++E V EE   +FVL IDEVE++ ++R  ALS   +EPSD++RVVNA+LT++DRLK++ NV+ + TSN+T A+D AF+DR D+K +VG P  + RY ILRS L EL+R G++   +H  ++ +L LPS A+     + P                                   EG+SGR LRKLP LAH+ +  P       F+G + EA R+
Sbjct:   35 EKVLVSVEICLNPSSAAKTEDVRAAVERMLEKRSLSYTDGPI-PVPMDDLFLSENVQRICICGKDDGEDNRGILLFWQVQPVVHVYQLIEDGPGEDISGGDLS--------------------------------SFREWFLPAREFDGLWESLVYETGLKQRLLRYTASALLFTEKGVNPCLVSWNRIILLHGPPGTGKTSLCKALAQKLSIRLNNRYSQSQLVEINAHSLFSKWFSESGKLVGKLFEKIQEMVDEESNLVFVL-IDEVESLAAARKAALS--GSEPSDSIRVVNALLTQLDRLKSWPNVIILTTSNITAAIDVAFVDRADIKAYVGPPTLQARYEILRSCLQELIRSGIV---LHPQDQDQLILPSFASLQGCLNDPKM-------------PDRTNQLNLSEHLLDAAKVCEGLSGRALRKLPFLAHAALLNPHICDSAKFVGMLIEAGRR 446          
BLAST of NO10G01100 vs. NCBI_GenBank
Match: XP_008392891.1 (PREDICTED: pachytene checkpoint protein 2 homolog [Malus domestica])

HSP 1 Score: 237.7 bits (605), Expect = 8.300e-59
Identity = 139/334 (41.62%), Postives = 195/334 (58.38%), Query Frame = 0
Query:  182 PVAFTSYVCPCPELVNVWESIHVAPSTKQALLSLAESSMLFSNAGVDPTLVSGNRLMLLYGAPGTGKTSLSRGLAQKLAIRHGESFAAVELLSVNAHALLSKFFGESSSLVGRMFGSVREKVAEEKTTLFVLAIDEVETMCSSRSQALSKGTNEPSDAVRVVNAVLTEMDRLKAFRNVLTVATSNVTQALDEAFLDRCDLKLHVGLPRPEGRYAILRSALVELMRCGVIIPRMHLPERVELLPSLAAATYSTSLPPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEGMSGRGLRKLPLLAHSLMAAPRTVGLDVFLGAMDEAVRQGRIE 516
            P  F  ++ P  E   +WES+      KQ L   A S++LF+  GV+P LVS NR++LL+G PGTGKTSL + LAQKL+IR    +   +L+ VNAH+L SK+F ES  LV  +F  ++E V EE   +FVL IDEVE++ ++R  ALS   +EPSD++RVVNA+LT++D+LK+  NV+ + TSN+T A+D AF+DR D+K +VG P  + RY ILRS L EL+R G++    HL +   +LP+ A+     ++P                                   EG+SGR LRKLP LAH+ +A P       FL  M +  R+ R E
Sbjct:  140 PSTFNEWILPANEFDGLWESLIYESGLKQRLXRYAASALLFTEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFNSRYPQCQLIEVNAHSLFSKWFSESGKLVANLFSKIQEMVEEESNLVFVL-IDEVESLAAARKAALS--GSEPSDSIRVVNALLTQLDKLKSAPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLHELIRTGIL---SHLEDCDSMLPNFASLREKLNMP-------------EVQDAQTPLHLCKQLFETAEACEGLSGRSLRKLPFLAHAALANPYGCDPSKFLSTMTDTARRERSE 454          
BLAST of NO10G01100 vs. NCBI_GenBank
Match: EOY20892.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1 [Theobroma cacao])

HSP 1 Score: 237.3 bits (604), Expect = 1.100e-58
Identity = 164/465 (35.27%), Postives = 231/465 (49.68%), Query Frame = 0
Query:   54 KIDVHIEARQAITSAVLPSDIKKRVLSFLQSHVRVYRLGPLGDFASLDPYLGEHVQCIVITELGN-TGQETAVSSW--RALSHVYVYAVFGGQHVGGTDFALEAXXXXXXXXXXXXXXXXXXXXXXXXXWCPVAFTSYVCPCPELVNVWESIHVAPSTKQALLSLAESSMLFSNAGVDPTLVSGNRLMLLYGAPGTGKTSLSRGLAQKLAIRHGESFAAVELLSVNAHALLSKFFGESSSLVGRMFGSVREKVAEEKTTLFVLAIDEVETMCSSRSQALSKGTNEPSDAVRVVNAVLTEMDRLKAFRNVLTVATSNVTQALDEAFLDRCDLKLHVGLPRPEGRYAILRSALVELMRCGVIIPRMHLPERVELLPSLAAATYSTSLPPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEGMSGRGLRKLPLLAHSLMAAPRTVGLDVFLGAMDEAVRQGRIE 516
            K  V +E     +S   P D++K V   L+     Y  GP+      DP+L E+VQ I I +          +  W  + + HV+  +  G       D  L                               +F  ++ P  E   +WES+      KQ LL  A S++LF+  GVDP LVS NR++LL+G PGTGKTSL + LAQKL+IR    +   +L+ VNAH+L SK+F ES  LV ++F  ++E V EE   +FVL IDEVE++ ++R  ALS   +EPSD++RVVNA+LT+MD+LK+  NV+ + TSN+T A+D AF+DR D+K ++G P  + RY IL+S L EL+R G+I       +   +LP         S+P                                   EG+SGR LRKLP LAH+ +  P       FL  M E  R+ R E
Sbjct:   40 KFHVSVEVCLKPSSTARPDDVRKAVEQMLEKRSLSYVDGPV-PVPIDDPFLMENVQRIRICDTDEWVKNHDILLFWQVKPVVHVFQLSEEGPCEELSGDGQLS------------------------------SFNDWILPAKEFDGMWESLIYESGLKQRLLRYAASALLFTEKGVDPFLVSWNRIILLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVL-IDEVESLAAARKAALS--GSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAFVDRADIKAYIGPPTLQARYEILKSCLNELIRTGIISSSRDSSQ--SILPDYVTLKEKLSMP-------------EIQEVQTTLHLWKQLLEAAEACEGLSGRSLRKLPFLAHAALNNPYCCDPSKFLNTMIETARRERSE 455          
BLAST of NO10G01100 vs. NCBI_GenBank
Match: XP_019257193.1 (PREDICTED: pachytene checkpoint protein 2 homolog [Nicotiana attenuata] >OIS96126.1 pachytene checkpoint protein 2-like protein [Nicotiana attenuata])

HSP 1 Score: 237.3 bits (604), Expect = 1.100e-58
Identity = 141/331 (42.60%), Postives = 195/331 (58.91%), Query Frame = 0
Query:  185 FTSYVCPCPELVNVWESIHVAPSTKQALLSLAESSMLFSNAGVDPTLVSGNRLMLLYGAPGTGKTSLSRGLAQKLAIRHGESFAAVELLSVNAHALLSKFFGESSSLVGRMFGSVREKVAEEKTTLFVLAIDEVETMCSSRSQALSKGTNEPSDAVRVVNAVLTEMDRLKAFRNVLTVATSNVTQALDEAFLDRCDLKLHVGLPRPEGRYAILRSALVELMRCGVIIPRMHLPERVELLPSLAAATYSTSLPPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEGMSGRGLRKLPLLAHSLMAAPRTVGLDVFLGAMDEAVRQGRIE 516
            F  ++ P  E   +WES+      KQ LL  A S++LF+  GV+P LVS NR++LL+G PGTGKTSL + LAQKL+IR    +   +L+ VNAH+L SK+F ES  LV ++F  ++E V EE   +FVL IDEVE++ ++R  ALS   +EPSD++RVVNA+LT++D+LK+  NV+ + TSN+T A+D AF+DR D+K +VG P  + RY ILRS L EL+R GV+    +  +   LLPS A    + S+                                    EGMSGR LRKLP LAH+ +A+P       FL  M E  ++ R E
Sbjct:  142 FNEWILPAKEFSGMWESLIYESGLKQRLLRYAASALLFTEKGVNPFLVSWNRIILLHGPPGTGKTSLCKALAQKLSIRFSSRYPQSQLVEVNAHSLFSKWFSESGKLVAKLFSKIQEMVEEENNLVFVL-IDEVESLAAARKAALS--GSEPSDSIRVVNALLTQLDKLKSAPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLQELLRTGVL---SNSQDAYHLLPSFAGLRENLSI--------------VTTESQMSIHLGKQLLEAAEACEGMSGRSLRKLPFLAHAALASPYNCEPGKFLHVMMETAKRERSE 452          
BLAST of NO10G01100 vs. NCBI_GenBank
Match: XP_016187656.1 (pachytene checkpoint protein 2 homolog [Arachis ipaensis])

HSP 1 Score: 236.5 bits (602), Expect = 1.900e-58
Identity = 142/332 (42.77%), Postives = 194/332 (58.43%), Query Frame = 0
Query:  184 AFTSYVCPCPELVNVWESIHVAPSTKQALLSLAESSMLFSNAGVDPTLVSGNRLMLLYGAPGTGKTSLSRGLAQKLAIRHGESFAAVELLSVNAHALLSKFFGESSSLVGRMFGSVREKVAEEKTTLFVLAIDEVETMCSSRSQALSKGTNEPSDAVRVVNAVLTEMDRLKAFRNVLTVATSNVTQALDEAFLDRCDLKLHVGLPRPEGRYAILRSALVELMRCGVIIPRMHLPERVELLPSLAAATYSTSLPPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEGMSGRGLRKLPLLAHSLMAAPRTVGLDVFLGAMDEAVRQGRIE 516
            +F  ++ P  E   +WES+      KQ LL  A S++LF+  GVDP LVS NR++LL+G PGTGKTSL + LAQKL+IR    F   +L+ VNAH+L SK+F ES  LV ++F  ++E V EE   +FVL IDEVE++ ++R  A+S   +EPSD++RVVNA+LT++D+LK+  NV+ + TSN+T A+D AF+DR D+K ++G P  + RY ILRS L ELMR G++            LPS A+A   +S P                                   EGMSGR LRKLP LAH+ +A P       FL  M E  ++ R E
Sbjct:  150 SFNEWILPAKEFDGMWESLIFESGLKQRLLRYAASALLFTEKGVDPFLVSWNRIILLHGPPGTGKTSLCKALAQKLSIRFNSRFPQCQLIEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEESNLVFVL-IDEVESLAAARKAAIS--GSEPSDSIRVVNALLTQIDKLKSSPNVIILTTSNITAAIDIAFVDRADIKAYIGPPTLQARYEILRSCLQELMRTGILTSLQGCDNTT--LPSYASAKDRSSAP-------------DFHEVTASMQLCNQLLETAKACEGMSGRSLRKLPFLAHAALANPFHCNPIKFLCTMIETAKRERSE 463          
BLAST of NO10G01100 vs. NCBI_GenBank
Match: XP_003601182.1 (pachytene checkpoint protein 2 homolog [Medicago truncatula] >AES71433.1 thyroid receptor-interacting protein [Medicago truncatula])

HSP 1 Score: 236.1 bits (601), Expect = 2.400e-58
Identity = 164/464 (35.34%), Postives = 238/464 (51.29%), Query Frame = 0
Query:   54 KIDVHIEARQAITSAVLPSDIKKRVLSFLQSHVRVYRLGPLGDFASLD-PYLGEHVQCIVITELGNTGQ-ETAVSSWRALSHVYVYAVFGGQHVGGTDFALEAXXXXXXXXXXXXXXXXXXXXXXXXXWCPVAFTSYVCPCPELVNVWESIHVAPSTKQALLSLAESSMLFSNAGVDPTLVSGNRLMLLYGAPGTGKTSLSRGLAQKLAIRHGESFAAVELLSVNAHALLSKFFGESSSLVGRMFGSVREKVAEEKTTLFVLAIDEVETMCSSRSQALSKGTNEPSDAVRVVNAVLTEMDRLKAFRNVLTVATSNVTQALDEAFLDRCDLKLHVGLPRPEGRYAILRSALVELMRCGVIIPRMHLPERVELLPSLAAATYSTSLPPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEGMSGRGLRKLPLLAHSLMAAPRTVGLDVFLGAMDEAVRQGRIE 516
            KI V +E     +S     D++  V   L+     Y  GP+     LD P+L ++VQ I + + G   Q +  +  W+    V+V+ +   +     D + +                              +F  ++ P  E   +WES+      KQ LL  A S++LF+   VDP LVS NR++LL+G PGTGKTSL + LAQKL+IR    F   +L+ VNAH+L SK+F ES  LV ++F  ++E V EE   +FVL IDEVE++ ++R  ALS   +EPSD++RVVNA+LT+MD+LK+  NV+ + TSN+T A+D AF+DR D+K +VG P  + RY ILRS + ELMR G++        +  +LP+ A+A    + P                                   EGMSGR LRKLP LAH+ +A P       FL  M +  ++ R E
Sbjct:   43 KILVPVEVCLKPSSTASIHDVRSAVEGMLEKRSLSYNGGPIP--VPLDEPFLADNVQRICVCDTGEGMQNDNVLLFWQVKPVVHVFQL--SEEGPCEDISSDGQSS--------------------------SFNEWILPAKEFDGMWESLIYESGLKQRLLRYAASALLFTEKAVDPFLVSWNRIILLHGPPGTGKTSLCKALAQKLSIRFNSRFPQAQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEEGNLVFVL-IDEVESLAAARKAALS--GSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCVQELMRTGILTNFEDC--KNIMLPNYASAKQRMNAP-------------DFHEATTFMQLCKKLVETAEACEGMSGRSLRKLPFLAHAALANPFDCNPIKFLCTMIDTAKRERSE 458          
BLAST of NO10G01100 vs. NCBI_GenBank
Match: XP_009362937.1 (PREDICTED: pachytene checkpoint protein 2 homolog [Pyrus x bretschneideri])

HSP 1 Score: 236.1 bits (601), Expect = 2.400e-58
Identity = 138/334 (41.32%), Postives = 195/334 (58.38%), Query Frame = 0
Query:  182 PVAFTSYVCPCPELVNVWESIHVAPSTKQALLSLAESSMLFSNAGVDPTLVSGNRLMLLYGAPGTGKTSLSRGLAQKLAIRHGESFAAVELLSVNAHALLSKFFGESSSLVGRMFGSVREKVAEEKTTLFVLAIDEVETMCSSRSQALSKGTNEPSDAVRVVNAVLTEMDRLKAFRNVLTVATSNVTQALDEAFLDRCDLKLHVGLPRPEGRYAILRSALVELMRCGVIIPRMHLPERVELLPSLAAATYSTSLPPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEGMSGRGLRKLPLLAHSLMAAPRTVGLDVFLGAMDEAVRQGRIE 516
            P  F  ++ P  E   +WES+      KQ LL  A S++LF+  GV+P LVS NR++LL+G PGTGKTSL + LAQKL+IR    +   +L+ VNAH+L SK+F ES  LV ++F  ++E V EE   +FVL IDEVE++ ++R  ALS   +EPSD++RVVNA+LT++D+LK+  NV+ + TSN+T A+D AF+DR D+K +VG P  + RY ILRS L EL+R G++    HL +   +L +  +     ++P                                   EG+SGR LRKLP LAH+ +A P       FL  M +  R+ R E
Sbjct:  140 PSTFNEWILPAKEFDGLWESLIYESGLKQRLLRYAASALLFTEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFNSRYPQCQLIEVNAHSLFSKWFSESGKLVAKLFSKIQEMVEEESNLVFVL-IDEVESLAAARKAALS--GSEPSDSIRVVNALLTQLDKLKSAPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLHELIRTGIL---SHLEDCDSMLSNFTSLREKLNMP-------------EVQDAQTPLHLCKQLFETAEACEGLSGRSLRKLPFLAHAALANPYGCDPSKFLSTMTDTARRERSE 454          
BLAST of NO10G01100 vs. NCBI_GenBank
Match: XP_015954557.1 (pachytene checkpoint protein 2 homolog [Arachis duranensis])

HSP 1 Score: 236.1 bits (601), Expect = 2.400e-58
Identity = 142/332 (42.77%), Postives = 194/332 (58.43%), Query Frame = 0
Query:  184 AFTSYVCPCPELVNVWESIHVAPSTKQALLSLAESSMLFSNAGVDPTLVSGNRLMLLYGAPGTGKTSLSRGLAQKLAIRHGESFAAVELLSVNAHALLSKFFGESSSLVGRMFGSVREKVAEEKTTLFVLAIDEVETMCSSRSQALSKGTNEPSDAVRVVNAVLTEMDRLKAFRNVLTVATSNVTQALDEAFLDRCDLKLHVGLPRPEGRYAILRSALVELMRCGVIIPRMHLPERVELLPSLAAATYSTSLPPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEGMSGRGLRKLPLLAHSLMAAPRTVGLDVFLGAMDEAVRQGRIE 516
            +F  ++ P  E   +WES+      KQ LL  A S++LF+  GVDP LVS NR++LL+G PGTGKTSL + LAQKL+IR    F   +L+ VNAH+L SK+F ES  LV ++F  ++E V EE   +FVL IDEVE++ ++R  A+S   +EPSD++RVVNA+LT++D+LK+  NV+ + TSN+T A+D AF+DR D+K ++G P  + RY ILRS L ELMR G++            LPS A+A   +S P                                   EGMSGR LRKLP LAH+ +A P       FL  M E  ++ R E
Sbjct:  160 SFNEWILPAKEFDGMWESLIFESGLKQRLLRYAASALLFTEKGVDPFLVSWNRIILLHGPPGTGKTSLCKALAQKLSIRFNSRFPQCQLIEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEESNLVFVL-IDEVESLAAARKAAIS--GSEPSDSIRVVNALLTQIDKLKSSPNVIILTTSNITAAIDIAFVDRADIKAYIGPPTLQARYEILRSCLQELMRTGILTSLQGCDNIT--LPSYASAKDRSSAP-------------DFHEVTASMQLCNQLLETAKACEGMSGRSLRKLPFLAHAALANPFDCNPIKFLCTMIETAKRERSE 473          
The following BLAST results are available for this feature:
BLAST of NO10G01100 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_008380652.27.500e-6041.92PREDICTED: pachytene checkpoint protein 2 homolog ... [more]
XP_004501872.14.900e-5935.78PREDICTED: pachytene checkpoint protein 2 homolog ... [more]
XP_006852366.18.300e-5935.13pachytene checkpoint protein 2 homolog isoform X1 ... [more]
XP_008392891.18.300e-5941.62PREDICTED: pachytene checkpoint protein 2 homolog ... [more]
EOY20892.11.100e-5835.27P-loop containing nucleoside triphosphate hydrolas... [more]
XP_019257193.11.100e-5842.60PREDICTED: pachytene checkpoint protein 2 homolog ... [more]
XP_016187656.11.900e-5842.77pachytene checkpoint protein 2 homolog [Arachis ip... [more]
XP_003601182.12.400e-5835.34pachytene checkpoint protein 2 homolog [Medicago t... [more]
XP_009362937.12.400e-5841.32PREDICTED: pachytene checkpoint protein 2 homolog ... [more]
XP_015954557.12.400e-5842.77pachytene checkpoint protein 2 homolog [Arachis du... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL053nonsL053Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL052nonsL052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR004ncniR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR017ngnoR017Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR015ngnoR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000982NSK000982Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO10G01100.1NO10G01100.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|554372gene_4108Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO10G01100.1NO10G01100.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO10G01100 ID=NO10G01100|Name=NO10G01100|organism=Nannochloropsis oceanica|type=gene|length=2336bp
TGCTTACTTTTCGATCCTCCTGCGCGCAAGGCCCAACCCACTACTTGTTT
GTGCTGGTACGTGACCCTCAAAGTCATCGGCTGATGCTTTTATCGTCATT
TTGGACACTTATGGCCTTCGTTTATTATATCCGCCTTTCCAATCACTCTC
GCTGCTGCCGCTGGTCTTGTCCCTGGTCTTGAGCGGCATATCGCTGTTAG
TAGATAAATGATTGTCGTGTAGCTAACAATGCTACGAGCGAGCCAGCCAA
GCTGCTGCTGTCTCTGCTGCATTCCTATATGTATAAGACAAGAGGGGGAG
CCGCGATGTACGGACTCTTGGTGTTTAGAGTGAAGGAGGAAAAGACCAGT
GACGACAAGTATGTCCTCGGGAAGCGGCATTCTGGGCACGTAAGCGACGG
TGTTTGCCTCTCTTCCCTCCTCTTTCCCTTCCACCCTCTCCATTGTAAAC
AAAAAGACGATTGTGTCATTATTAAACAGAAAGGCATATCCATGTAAGAG
AGTTTGCTGGTAACAACCCCTCAGATGCACAGATACACACGCACACACAT
AAGTCGGCACAACTTACTCCGTCTTCATCACTCACACTTTTACGCGCCCC
TCTTCCTCCTCCTCTCTCCTCACCCACAGGCAGCATGACGAGCATGGAGT
TGGGCGCCCTCAGCCTTAACCCAACTCCTCCTCTTCCTCCAACTCCTTCA
ACTCCTCCCTTCGCTTCCTCTGCCTGTGCCCCCGTTCCTCCCTCCTCCTC
TTCCTCCTCCTCCTCCTCAACCAACCCCTCCAAGAACATGAAAAAGATCG
ACGTCCACATCGAAGCCCGTCAGGCTATCACCAGCGCTGTCCTCCCCTCA
GATATCAAAAAACGGGTCCTTTCCTTCCTGCAATCTCACGTGAGAGTCTA
TCGCCTCGGTCCGCTCGGGGACTTTGCGTCCCTCGATCCTTACCTGGGGG
AGCACGTCCAATGCATTGTCATCACGGAGCTTGGGAACACGGGGCAAGAG
ACTGCTGTGTCTAGCTGGCGAGCATTGTCTCACGTCTATGTATACGCTGT
CTTTGGAGGCCAACATGTGGGTGGAACAGATTTCGCCTTGGAGGCCGACG
GAGGAGGAGGAGGAGGAGGAGGAGAGGGAGATGGAGGAGGAGCAGCGGCA
GCCGCCTCGTCCTCCACGTCCTGGTGCCCTGTGGCGTTTACCTCCTACGT
GTGTCCTTGCCCTGAGCTTGTCAATGTGTGGGAGAGCATTCATGTCGCCC
CCTCCACGAAACAGGCCTTGCTCAGCCTAGCTGAAAGCTCCATGCTTTTT
TCAAACGCCGGTGTGGACCCTACCTTGGTGAGTGGGAATCGACTCATGCT
CTTGTACGGTGCGCCGGGGACGGGCAAGACCTCCTTGTCTCGAGGCCTTG
CACAGAAATTGGCCATTAGGCATGGAGAAAGCTTTGCGGCTGTGGAGCTC
TTGAGTGTCAATGCGCACGCCTTGCTCTCTAAGTTTTTCGGAGAGAGCAG
TTCGTTAGTTGGGCGGATGTTTGGTTCAGTGAGGGAGAAGGTGGCAGAGG
AGAAGACCACGCTATTTGTGCTTGCGATTGATGAGGTGGAGACGATGTGT
AGCAGCAGAAGCCAGGCATTGTCCAAGGGGACGAACGAGCCGAGCGATGC
CGTCCGTGTCGTGAATGCTGTGTTGACAGAGATGGACCGACTGAAGGCAT
TTAGGAACGTCCTGACCGTGGCGACATCGAATGTGACTCAGGCGTTGGAT
GAGgtgaggagaaaggagggggaaaggaaggagtggcaggtacttaggta
tctcgagcaccccctcactgccactttaaaaggcgctgtcacgaatcgac
cctccctccctccctccctccctccctctcttctctgtcaatcttctgca
gGCGTTCCTCGACCGCTGCGACTTAAAGCTCCACGTGGGCCTGCCCCGTC
CCGAGGGGCGGTATGCCATCCTTCGTTCCGCCCTTGTGGAGCTCATGCGT
TGTGGGGTCATCATCCCCCGCATGCATCTGCCTGAACGCGTTGAGTTGCT
TCCCTCCCTTGCTGCTGCAACTTATTCCACTTCCCTTCCTCCTCAGCACC
AACAGCACCAACAGCACCAACAGCACAACCAGCAGCGGCAGCAGCAGCAG
GCTCCAGGGGTAAGGCAGCTACTACTCCAGTTGGTTGAACGCACGGAGGG
GATGAGTGGACGTGGCCTGCGGAAATTGCCTTTGCTGGCCCATTCGCTGA
TGGCAGCACCTCGGACGGTGGGGCTGGACGTGTTTTTAGGGGCGATGGAC
GAGGCGGTCAGGCAGGGGAGGATCGAGCGGGAATAG
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protein sequence of NO10G01100.1

>NO10G01100.1-protein ID=NO10G01100.1-protein|Name=NO10G01100.1|organism=Nannochloropsis oceanica|type=polypeptide|length=518bp
MTSMELGALSLNPTPPLPPTPSTPPFASSACAPVPPSSSSSSSSSTNPSK
NMKKIDVHIEARQAITSAVLPSDIKKRVLSFLQSHVRVYRLGPLGDFASL
DPYLGEHVQCIVITELGNTGQETAVSSWRALSHVYVYAVFGGQHVGGTDF
ALEADGGGGGGGGEGDGGGAAAAASSSTSWCPVAFTSYVCPCPELVNVWE
SIHVAPSTKQALLSLAESSMLFSNAGVDPTLVSGNRLMLLYGAPGTGKTS
LSRGLAQKLAIRHGESFAAVELLSVNAHALLSKFFGESSSLVGRMFGSVR
EKVAEEKTTLFVLAIDEVETMCSSRSQALSKGTNEPSDAVRVVNAVLTEM
DRLKAFRNVLTVATSNVTQALDEAFLDRCDLKLHVGLPRPEGRYAILRSA
LVELMRCGVIIPRMHLPERVELLPSLAAATYSTSLPPQHQQHQQHQQHNQ
QRQQQQAPGVRQLLLQLVERTEGMSGRGLRKLPLLAHSLMAAPRTVGLDV
FLGAMDEAVRQGRIERE*
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Synonyms
Publications