NO10G01030, NO10G01030 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO10G01030 vs. NCBI_GenBank
Match: XP_005854585.1 (hypothetical protein NGA_0175400 [Nannochloropsis gaditana CCMP526] >EKU21766.1 hypothetical protein NGA_0175400 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 397.9 bits (1021), Expect = 2.400e-107 Identity = 194/254 (76.38%), Postives = 217/254 (85.43%), Query Frame = 0 Query: 1 MKTTGIPPDVQPYIDMLADRWPGLALSTGAWTVVFVVVCVLPRISDKTFDFRNRVVSILHAILSAYLTFFLVLLQTPCDIGGPNTRNQIITLNVSAGYFLYDYAACSLNDLRNKHFDAMNFFHHLATVAGLLTGLITQRSGAELGMCLFLMEVSNPFMHMIHIFRELGYNDSPVAEANKALFAIIFTFARIVAGPVLTYYSMICPRTHWVIKVGACGILLVSLLWFSKIVAMLGKVFGGGKKGGDRGMNGEKKR 255 MKTT + +QPY+D+LADRWPGL LST AW+VVF +VCVLP IS +FDFRNR VSILHA LSAYLT LVLL+TPC IGGPNTRNQII LNVS GYF+YDY AC+LND+R +HFD MNFFHHLA++AGLLTGLI +RSGAELGMCLFLMEVSNPFMH IH+FRELGYND+PVAEANKALFAIIFT AR+V GP LTYY+++ PRTHWVIK GA GIL VS LWFSKIVAML K F GG +G D+G GEKKR Sbjct: 1 MKTTDLLAAIQPYVDILADRWPGLILSTVAWSVVFGLVCVLPAISGTSFDFRNRTVSILHAFLSAYLTLVLVLLETPCKIGGPNTRNQIIVLNVSTGYFIYDYVACTLNDVRKRHFDTMNFFHHLASLAGLLTGLINERSGAELGMCLFLMEVSNPFMHTIHLFRELGYNDAPVAEANKALFAIIFTLARVVGGPFLTYYTLVSPRTHWVIKAGALGILAVSFLWFSKIVAMLSKAF-GGSEGKDKG--GEKKR 251
BLAST of NO10G01030 vs. NCBI_GenBank
Match: XP_005853778.1 (hypothetical protein NGA_0438500 [Nannochloropsis gaditana CCMP526] >EKU22588.1 hypothetical protein NGA_0438500 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 396.7 bits (1018), Expect = 5.300e-107 Identity = 193/254 (75.98%), Postives = 217/254 (85.43%), Query Frame = 0 Query: 1 MKTTGIPPDVQPYIDMLADRWPGLALSTGAWTVVFVVVCVLPRISDKTFDFRNRVVSILHAILSAYLTFFLVLLQTPCDIGGPNTRNQIITLNVSAGYFLYDYAACSLNDLRNKHFDAMNFFHHLATVAGLLTGLITQRSGAELGMCLFLMEVSNPFMHMIHIFRELGYNDSPVAEANKALFAIIFTFARIVAGPVLTYYSMICPRTHWVIKVGACGILLVSLLWFSKIVAMLGKVFGGGKKGGDRGMNGEKKR 255 MKTT + +QPY+D+LADRWPGL LST AW+VVF +VCVLP IS +FDFRNR VSILHA LSAYLT LVLL+TPC IGGPNTRNQII LNVS GYF+YDY AC+LND+R +HFD MNFFHHLA++AGLLTGLI +RSGAELGMCLFLMEVSNPFMH IH+FRELGYND+PVAEANKALFAIIFT AR+V GP LTYY+++ PRTHWVIK GA GIL VS LWFSKIVAML K F GG +G D+G GEKK+ Sbjct: 1 MKTTDLLAAIQPYVDILADRWPGLILSTVAWSVVFGLVCVLPAISGTSFDFRNRTVSILHAFLSAYLTLVLVLLETPCKIGGPNTRNQIIVLNVSTGYFIYDYVACTLNDVRKRHFDTMNFFHHLASLAGLLTGLINERSGAELGMCLFLMEVSNPFMHTIHLFRELGYNDAPVAEANKALFAIIFTLARVVGGPFLTYYTLVSPRTHWVIKAGALGILAVSFLWFSKIVAMLSKAF-GGSEGKDKG--GEKKK 251
BLAST of NO10G01030 vs. NCBI_GenBank
Match: EWM25332.1 (TRAM, LAG1 and CLN8 lipid-sensing domain containing protein [Nannochloropsis gaditana]) HSP 1 Score: 394.4 bits (1012), Expect = 2.600e-106 Identity = 192/254 (75.59%), Postives = 217/254 (85.43%), Query Frame = 0 Query: 1 MKTTGIPPDVQPYIDMLADRWPGLALSTGAWTVVFVVVCVLPRISDKTFDFRNRVVSILHAILSAYLTFFLVLLQTPCDIGGPNTRNQIITLNVSAGYFLYDYAACSLNDLRNKHFDAMNFFHHLATVAGLLTGLITQRSGAELGMCLFLMEVSNPFMHMIHIFRELGYNDSPVAEANKALFAIIFTFARIVAGPVLTYYSMICPRTHWVIKVGACGILLVSLLWFSKIVAMLGKVFGGGKKGGDRGMNGEKKR 255 MKTT + +Q Y+D+LADRWPGL LST AW+VVF +VCVLP IS +FDFRNR VSILHA LSAYLT LVLL+TPC+IGGPNTRNQII LNVS GYF+YDY AC+LND+R +HFD MNFFHHLA++AGLLTGLI +RSGAELGMCLFLMEVSNPFMH IH+FRELGYND+PVAEANKALFAIIFT AR+V GP LTYY+++ PRTHWVIK GA GIL VS LWFSKIVAML K F GG +G D+G GEKK+ Sbjct: 1 MKTTDLLAAIQLYVDILADRWPGLVLSTVAWSVVFGLVCVLPAISGTSFDFRNRTVSILHAFLSAYLTLVLVLLETPCEIGGPNTRNQIIVLNVSTGYFIYDYVACTLNDVRKRHFDTMNFFHHLASLAGLLTGLINERSGAELGMCLFLMEVSNPFMHTIHLFRELGYNDAPVAEANKALFAIIFTLARVVGGPFLTYYTLVSPRTHWVIKAGALGILAVSFLWFSKIVAMLSKAF-GGSEGKDKG--GEKKK 251
BLAST of NO10G01030 vs. NCBI_GenBank
Match: XP_003080226.1 (TRAM/LAG1/CLN8 homology domain [Ostreococcus tauri] >CAL54393.1 TRAM/LAG1/CLN8 homology domain [Ostreococcus tauri] >OUS47498.1 TLC domain-domain-containing protein [Ostreococcus tauri]) HSP 1 Score: 157.1 bits (396), Expect = 7.100e-35 Identity = 90/223 (40.36%), Postives = 134/223 (60.09%), Query Frame = 0 Query: 28 TGAWTVVFVVVCVLPRISDKTFDFRNRVVSILHAILS-----AYLTFFLVLLQTPCDIGGPNTRNQIITLNVSAGYFLYDYAACSLNDLRNKHFDAMNFFHHLATVAGLLTGLITQRSGAELGMCLFLMEVSNPFMHMIHIFRELGYNDSPVAEANKALFAIIFTFARIVAGPVLTYYSMICPRTHWVIKVGACGILLVSLLWFSKIVAML---GKVFGGGKK 243 T AWT ++V+ + + +T DF NR+VS++HA+++ A L + LL+ ++GG NT + + +S GYF+YD C LN+ + N HH+ TV GL +G++T RSG EL CLFLMEVSNP +H+ + REL DS +A N +FA++F F R+V GP L Y +++ +++K GA GIL+VSL+W KI+ M+ K GG K Sbjct: 33 TLAWTALYVLFRFV-LLRKRTADFNNRLVSLIHALVAMKYCVACLPTWGALLE---NVGGKNTSAHLDCITMSLGYFVYDLIYCVLNN------EIENVIHHMFTVGGLASGVVTGRSGPELVGCLFLMEVSNPSLHLRSLLRELDMKDSVLASVNDLIFALLFLFCRLVVGPPLVYKTVVNKDNTYLVKAGALGILIVSLMWAWKIIMMIVRTSKKLAGGSK 245
BLAST of NO10G01030 vs. NCBI_GenBank
Match: XP_001418871.1 (predicted protein [Ostreococcus lucimarinus CCE9901] >ABO97164.1 predicted protein [Ostreococcus lucimarinus CCE9901]) HSP 1 Score: 150.2 bits (378), Expect = 8.600e-33 Identity = 88/222 (39.64%), Postives = 133/222 (59.91%), Query Frame = 0 Query: 31 WTVVFVVV--CVLPRISDKTFDFRNRVVSILHAILSAY-----LTFFLVLLQTPCDIGGPNTRNQIITLNVSAGYFLYDYAACSLNDLRNKHFDAMNFFHHLATVAGLLTGLITQRSGAELGMCLFLMEVSNPFMHMIHIFRELGYNDSPVAEANKALFAIIFTFARIVAGPVLTYYSMICPRTHWVIKVGACGILLVSLLWFSKIVAML----GKVFGGGK 242 WT+++V + VL R +T DF NR VS +HA+++ Y L + LL+ ++GG NT + + +S GYF+YD+ C LN+ + N HH+ TV GL +G+IT RSG EL CLFLMEVSNP +H+ + REL DS +A N LFA++F R++ GP L + +++ +++K GA GI +VS++W +I+ M+ K+FGG K Sbjct: 30 WTLLYVFLRFGVLRR---RTADFSNRTVSFIHAVVAIYMCARCLPTWGALLE---NVGGANTMAHLECMTLSLGYFVYDFFYCLLNN------EVENVVHHMFTVGGLASGVITGRSGPELVGCLFLMEVSNPSLHLRSMLRELNMKDSLLATLNDLLFALLFLLCRLIVGPPLVWRTVVNDSNTYIVKAGALGIFVVSVMWGWRIIMMIVRTVKKLFGGAK 239
BLAST of NO10G01030 vs. NCBI_GenBank
Match: PTQ44345.1 (hypothetical protein MARPO_0020s0017 [Marchantia polymorpha]) HSP 1 Score: 150.2 bits (378), Expect = 8.600e-33 Identity = 89/215 (41.40%), Postives = 123/215 (57.21%), Query Frame = 0 Query: 21 WPGLALSTGAWTVVFVVVCVLPRISDKTFDFRNRVVSILHAILSAYLTFFLVL-LQTPCD-IGGPNTRNQIITLNVSAGYFLYDYAACSLNDLRNKHFDAMNFFHHLATVAGLLTGLITQRSGAELGMCLFLMEVSNPFMHMIHIFRELGYNDSPVAEANKALFAIIFTFARIVAGPVLTYYSMICPRTHWVIKVGACGILLVSLLWFSKIVAML 234 W GLA+ T AW F +V L K+ +F NR VS++H ++AYL V P D IGGP++ Q+ + S YF+YD+ C + R D N HH+ T+ GL G +TQ G EL CL+LME+SNPFMH +F+E G D+P+ AN F +IFT AR+ GP + Y+++ T V+K GA GI +VS+ WF KI M+ Sbjct: 4 WQGLAVGTVAWGAGFGIVTALLG-KKKSGEFCNRCVSMVHVFVAAYLCMASVSDWSRPLDGIGGPSSALQMRAIKTSLAYFVYDFFCCLVVFPR----DIGNAVHHIITIMGLGYGFMTQTCGTELVACLWLMELSNPFMHARELFKEFGIKDTPLNMANDLSFVVIFTLARMGVGPYVVYHTLNSQSTP-VVKFGAVGIQVVSVFWFYKIARMV 212
BLAST of NO10G01030 vs. NCBI_GenBank
Match: XP_002499534.1 (predicted protein [Micromonas commoda] >ACO60792.1 predicted protein [Micromonas commoda]) HSP 1 Score: 149.8 bits (377), Expect = 1.100e-32 Identity = 86/223 (38.57%), Postives = 125/223 (56.05%), Query Frame = 0 Query: 31 WTV---VFVVVCVLPRISDKTFDFRNRVVSILHAILSAYLTFFLVLLQTPCD-----IGGPNTRNQIITLNVSAGYFLYDYAACSLNDLRNKHFDAMNFFHHLATVAGLLTGLITQRSGAELGMCLFLMEVSNPFMHMIHIFRELGYNDSPVAEANKALFAIIFTFARIVAGPVLTYYSMICPRTHWVIKVGACGILLVSLLWFSKIVAML----GKVFGGGK 242 WTV + VVC + DF NRVVSI+HA+++ Y ++ V + D IGG NT Q + + +S YF YD C+L D M+ HH+ T+ GL +G++ RSGAEL CLFLMEVSNP +H+ +F E+G S +A N +FA++F R+V GP L + ++ P +++K G GIL VS+ W I+ ++ K+ GGGK Sbjct: 25 WTVFWGLMFVVCRFALFKKYSADFSNRVVSIVHAVVAIYYSY--VTFENGWDGMFDNIGGANTEAQTLCMAISLSYFTYDLIYCALGG------DFMSVVHHMFTMGGLASGVLNGRSGAELVACLFLMEVSNPSLHLRTVFIEMGLKTSMLASINSLVFALMFLVCRLVIGPPLVWKTLASPDNDYIVKAGGFGILAVSVFWGMSIIRIIVKEVKKLMGGGK 239
BLAST of NO10G01030 vs. NCBI_GenBank
Match: XP_024379947.1 (transmembrane protein 136-like [Physcomitrella patens] >PNR50855.1 hypothetical protein PHYPA_010041 [Physcomitrella patens]) HSP 1 Score: 149.1 bits (375), Expect = 1.900e-32 Identity = 89/212 (41.98%), Postives = 119/212 (56.13%), Query Frame = 0 Query: 24 LALSTGAWTVVFVVVCVLPRISDKTFDFRNRVVSILHAILSAYLTFFLVL-LQTPCD-IGGPNTRNQIITLNVSAGYFLYDYAACSLNDLRNKHFDAMNFFHHLATVAGLLTGLITQRSGAELGMCLFLMEVSNPFMHMIHIFRELGYNDSPVAEANKALFAIIFTFARIVAGPVLTYYSMICPRTHWVIKVGACGILLVSLLWFSKIVAML 234 ++ T AWT V+V+ VL ++ DF NR+VS++H +S Y V P D +G +T Q++ L VS YF YD C L F F HH+ T+ GL G Q SG EL CL LMEVSNPFMH + +EL DS + AN +FA+IFT AR+ GP++ Y ++ T + +KVGA GI +VSLLWF KI M+ Sbjct: 15 MSAMTAAWTFVYVLSRVL--FPARSKDFCNRIVSLIHVFVSCYFCSKSVADWSRPLDGVGAASTYPQMLALTVSLAYFTYDTLCC----LVELPFSLDVFMHHVLTILGLGFGYERQISGTELVACLMLMEVSNPFMHARELLKELNLKDSSMNLANDVVFALIFTVARVFIGPIVVYKCLLSSTTPFAVKVGAVGIQVVSLLWFYKIARMV 220
BLAST of NO10G01030 vs. NCBI_GenBank
Match: XP_005853901.1 (hypothetical protein NGA_0463400 [Nannochloropsis gaditana CCMP526] >EKU22455.1 hypothetical protein NGA_0463400 [Nannochloropsis gaditana CCMP526] >EWM22253.1 TRAM, LAG1 and CLN8 lipid-sensing domain containing protein [Nannochloropsis gaditana]) HSP 1 Score: 145.2 bits (365), Expect = 2.800e-31 Identity = 70/208 (33.65%), Postives = 124/208 (59.62%), Query Frame = 0 Query: 23 GLALSTGAWTVVFVVVCVLPRISDKTFDFRNRVVSILHAILSAYLTFFLVLLQTPCDIGGPNTRNQIITLNVSAGYFLYDYAACSLNDLRNKHFDAMNFFHHLATVAGLLTGLITQRSGAELGMCLFLMEVSNPFMHMIHIFRELGYNDSPVAEANKALFAIIFTFARIVAGPVLTYYSMICPRTHWVIKVGACGILLVSLLWFSKIV 231 G+ +S W+++F +V VLP +TF ++ RVV+I HA + L + L + P +IGG NT Q I +NV+ G+FLYD + + +D M FHH + + G + RSGA++ LF+ E++NPFM++ ++ RE+G+ D+ +A N+A+FA+ T + P+L ++ P++H + + A G+++V+++WF K + Sbjct: 28 GVCVSATIWSLLFGIVQVLPIFKGRTFGYKTRVVAIFHAFTTMTLAYRLSFMCRPLEIGGINTPGQDIVVNVAGGFFLYDLISWIIYGYVIAKYDWMQLFHHASCLVGSWACWSSGRSGADVTFALFVAELANPFMYLRYLLREVGWKDTTLARTNQAIFALAMTLTIPILAPILACVILMEPKSHPLHQAAAVGLVVVNMMWFFKFM 235
BLAST of NO10G01030 vs. NCBI_GenBank
Match: OAE26028.1 (hypothetical protein AXG93_4601s1270 [Marchantia polymorpha subsp. ruderalis]) HSP 1 Score: 142.9 bits (359), Expect = 1.400e-30 Identity = 89/225 (39.56%), Postives = 124/225 (55.11%), Query Frame = 0 Query: 21 WPGLALSTGAWTVVFVVVCVLPRISDKTFDFRNRVVSILHAILSAYLTFFLVL-LQTPCD-IGGPNTRNQIITLNVSAGYFLYDYAACSLNDLRNKHFDAMNFFHHLATVAGLLTGLITQ----------RSGAELGMCLFLMEVSNPFMHMIHIFRELGYNDSPVAEANKALFAIIFTFARIVAGPVLTYYSMICPRTHWVIKVGACGILLVSLLWFSKIVAML 234 W GLA+ T AW F +V L K+ +F NR VS++H ++AYL V P D IGGP++ Q+ + S YF+YD+ C + R D N HH+ T+ GL G +TQ + G EL CL+LME+SNPFMH +F+E G D+P+ AN F +IFT AR+ GP + Y+++ T V+K GA GI +VS+ WF KI M+ Sbjct: 4 WQGLAVGTVAWGAGFGIVTALLG-KKKSGEFCNRCVSMVHVFVAAYLCMASVSDWSRPLDGIGGPSSALQMRAIKTSLAYFVYDFFCCLVVFPR----DIGNAVHHIITIMGLGYGFMTQTCPNEAKDVMQCGTELVACLWLMELSNPFMHARELFKEFGIKDTPLNMANDLSFVVIFTLARMGVGPYVVYHTLNSQSTP-VVKFGAVGIQVVSVFWFYKIARMV 222 The following BLAST results are available for this feature:
BLAST of NO10G01030 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO10G01030 ID=NO10G01030|Name=NO10G01030|organism=Nannochloropsis oceanica|type=gene|length=899bpback to top protein sequence of NO10G01030.1 >NO10G01030.1-protein ID=NO10G01030.1-protein|Name=NO10G01030.1|organism=Nannochloropsis oceanica|type=polypeptide|length=256bpback to top Synonyms
Publications
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