NO10G00920, NO10G00920 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO10G00920 vs. NCBI_GenBank
Match: EWM25325.1 (mitochondrial carrier family [Nannochloropsis gaditana]) HSP 1 Score: 401.0 bits (1029), Expect = 2.900e-108 Identity = 216/271 (79.70%), Postives = 240/271 (88.56%), Query Frame = 0
Query: 1 MVREGGIGSLYRGLLSPQAGFGVTFAISFAGYGQGTRFFREGNTERDLTLGEMTAAGAWAGLLQSPSRQVFERVKSVMQVQKGGGGGDKAPYKWSGECVVQLVKKEGLYNGLFRGLDATVLRELPQFAVYYPIYELSIRALKEF----------HDTXXXXXXXXXXXXXXXXXXXXXXXGIAGTLQWLPPFYCIDVLKSRMQSALPGVYSSVWDCAKKSYQTEGIGVFFRGLPVALIRAFPLHACIFFGYEVTLAALHDEELGSILPPPE 262
MVREGGI SLYRGLLSPQAGFGVTFAISFAGYGQGTRFFR+G+ +R+LTLGEMTA+GAWAGLLQSP+RQ+FER+KSVMQV+K GG DK PY+WSGEC+VQLV+KEGLYNGLFRGLDAT LRE+PQFAVYYP+YE+++RAL++ XXXXXXXXXXXXXXXXXXXXXX G+AGT+QWLPPFYC+DVLKSRMQSALPGVY +VWDCAKKSYQ EGIGVFFRGLPVALIRAFPL+ACIF GYE TLAALH EE LPPPE
Sbjct: 1 MVREGGISSLYRGLLSPQAGFGVTFAISFAGYGQGTRFFRKGDNKRELTLGEMTASGAWAGLLQSPARQIFERIKSVMQVRKAAGGADKPPYRWSGECLVQLVRKEGLYNGLFRGLDATALREVPQFAVYYPLYEMNVRALQKMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGVAGTVQWLPPFYCLDVLKSRMQSALPGVYDNVWDCAKKSYQQEGIGVFFRGLPVALIRAFPLNACIFLGYETTLAALHQEEEIPHLPPPE 271
BLAST of NO10G00920 vs. NCBI_GenBank
Match: XP_005854420.1 (mitochondrial carrier family [Nannochloropsis gaditana CCMP526] >EKU21946.1 mitochondrial carrier family [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 319.7 bits (818), Expect = 8.400e-84 Identity = 186/271 (68.63%), Postives = 207/271 (76.38%), Query Frame = 0
Query: 1 MVREGGIGSLYRGLLSPQAGFGVTFAISFAGYGQGTRFFREGNTERDLTLGEMTAAGAWAGLLQSPSRQVFERVKSVMQVQKGGGGGDKAPYKWSGECVVQLVKKEGLYNGLFRGLDATVLRELPQFAVYYPIYELSIRALKEF----------HDTXXXXXXXXXXXXXXXXXXXXXXXGIAGTLQWLPPFYCIDVLKSRMQSALPGVYSSVWDCAKKSYQTEGIGVFFRGLPVALIRAFPLHACIFFGYEVTLAALHDEELGSILPPPE 262
MVREGGI SLYRGLLSPQAGFGVTFAISFAGYGQGTRFFR+G+ +R+LTLGEMTA+GAWAGLLQSP+RQ+FER+KSVMQV+K GG DK PY+WSGEC +YE+++RAL++ XXXXXXXXXXXXXXXXXXXXXX G+AGT+QWLPPFYC+DVLKSRMQSALPGVY +VWDCAKKSYQ EGIGVFFRGLPVALIRAFPL+ACIF GYE TLAALH EE LPPPE
Sbjct: 51 MVREGGISSLYRGLLSPQAGFGVTFAISFAGYGQGTRFFRKGDNKRELTLGEMTASGAWAGLLQSPARQIFERIKSVMQVRKAAGGADKPPYRWSGEC----------------------------------LYEMNVRALQKMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGVAGTVQWLPPFYCLDVLKSRMQSALPGVYDNVWDCAKKSYQQEGIGVFFRGLPVALIRAFPLNACIFLGYETTLAALHQEEEIPHLPPPE 287
BLAST of NO10G00920 vs. NCBI_GenBank
Match: CBJ29814.1 (carnitine/acylcarnitine carrier protein [Ectocarpus siliculosus]) HSP 1 Score: 224.6 bits (571), Expect = 3.700e-55 Identity = 114/259 (44.02%), Postives = 155/259 (59.85%), Query Frame = 0
Query: 1 MVREGGIGSLYRGLLSPQAGFGVTFAISFAGYGQGTRFFR-------EGNTERDLTLGEMTAAGAWAGLLQSPSRQVFERVKSVMQVQKGGGGGDKAPYKWSGECVVQLVKKEGLYNGLFRGLDATVLRELPQFAVYYPIYELSIRALKEFHDTXXXXXXXXXXXXXXXXXXXXXXXGIAGTLQWLPPFYCIDVLKSRMQSALPGVYSSVWDCAKKSYQTEGIGVFFRGLPVALIRAFPLHACIFFGYEVTLAALHDEE 253
M G+ S YRGLLSP AG+G FA+SF+ YG +RF + ++ L E +AAG +AG + SP R VF+RVK+VMQV+ G G APY WSG C LV++EG+ +GLFRG+++T+LRE+ Q A+YYP YE++ L GIAG WLPP YC+DV+K+R+QSA PGVY WDC +K+ ++EG V FRGL ++++RAFP+H +F GYE T+ L E
Sbjct: 1 MAAHEGLMSWYRGLLSPVAGYGAMFAVSFSSYGMASRFLQXXXXXXXXXXXXXEVFLWEKSAAGFFAGAMNSPFRTVFDRVKTVMQVRVGNGRA--APYSWSGACAADLVRREGVMSGLFRGIESTMLREMLQCAIYYPSYEVTKDLLAR--------RSTSGKSSVPEPALQMLAGGIAGCATWLPPVYCLDVIKTRLQSAEPGVYGGTWDCLRKTVRSEGTPVLFRGLGLSMLRAFPMHGLVFVGYETTIGLLTTRE 249
BLAST of NO10G00920 vs. NCBI_GenBank
Match: CBJ29832.1 (carnitine/acylcarnitine carrier protein [Ectocarpus siliculosus]) HSP 1 Score: 193.4 bits (490), Expect = 9.100e-46 Identity = 100/219 (45.66%), Postives = 131/219 (59.82%), Query Frame = 0
Query: 40 REGNTERDLTLGEMTAAGAWAGLLQSPSRQVFERVKSVMQVQKGGGGGDKAPYKWSGECVVQLVKKEGLYNGLFRGLDATVLRELPQFAVYYPIYELSIRALKEFHDTXXXXXXXXXXXXXXXXXXXXXXXGIAGTLQWLPPFYCIDVLKSRMQSALPGVYSSVWDCAKKSYQTEGIGVFFRGLPVALIRAFPLHACIFFGYEVTLAALHDEELGSILP 259
RE LTL E AGAWAG++ +P RQVFERVK VMQV++ G ++PY WSG CVV LV++EG+ GL RG+ AT+LRE QF +YYP YE++ K++ G+AG + WLPP YC+DV+K+RMQ+A PGVY V DC K+ + EG+ V FRGL A++RAFP+H +F GYE T+ L S P
Sbjct: 17 REAKATDKLTLPEKGIAGAWAGVMNAPMRQVFERVKGVMQVRQ--GKKLQSPYSWSGACVVDLVRREGIAMGLCRGMGATMLREPLQFGIYYPSYEIA----KDY-----FLPPDRTSTAVPEPILLALAGGLAGCVMWLPPIYCLDVIKTRMQTAEPGVYRGVRDCLMKTLRAEGMPVLFRGLGAAMLRAFPMHGLVFLGYETTIDLLGARPRSSCSP 224
BLAST of NO10G00920 vs. NCBI_GenBank
Match: XP_013758254.1 (carnitine/acylcarnitine [Thecamonas trahens ATCC 50062] >KNC48834.1 carnitine/acylcarnitine [Thecamonas trahens ATCC 50062]) HSP 1 Score: 145.6 bits (366), Expect = 2.200e-31 Identity = 90/250 (36.00%), Postives = 127/250 (50.80%), Query Frame = 0
Query: 1 MVREGGIGSLYRGLLSPQAGFGVTFAISFAGYGQGTRFFRE--GNTERDLTLGEMTAAGAWAGLLQSPSRQVFERVKSVMQVQKGGGGGDKAPYKWSGECVVQLVKKEGLYNGLFRGLDATVLRELPQFAVYYPIYELSIRALKEFHDTXXXXXXXXXXXXXXXXXXXXXXXGIAGTLQWLPPFYCIDVLKSRMQSALPGVYSSVWDCAKKSYQTEGIGVFFRGLPVALIRAFPLHACIFFGYEVTLAAL 249
MV G SLYRGL +P AG+GV A++F + + E T + A A+AGL+QS R E K+V Q G P+K + + +V+ +G + LFRGL AT+ RE+PQ+A+YYP Y L AL + +AG+ QW+P +DV+K+RMQ A G Y+SV CA+ + +G+ FF+G ALIRA PLHA +F GY+ T+ L
Sbjct: 62 MVASEGPASLYRGLTAPVAGYGVINAVAFGSFEWAKSWLDEVVDETRAGSMAQVVIPAAAFAGLVQSFVRGPVELAKTVQQAWHNPGNARAPPFKSAFHGIAHVVRNDG-PSALFRGLGATIAREVPQYAIYYPTYALLKPALTD------------ALPSKYAPVAVAAAGALAGSAQWVPTI-PVDVIKTRMQGAPAGTYTSVVHCARTLWAEQGLATFFKGTAPALIRAAPLHAGVFLGYDTTMKLL 297
BLAST of NO10G00920 vs. NCBI_GenBank
Match: SAL96638.1 (hypothetical protein [Absidia glauca]) HSP 1 Score: 138.7 bits (348), Expect = 2.700e-29 Identity = 93/255 (36.47%), Postives = 130/255 (50.98%), Query Frame = 0
Query: 1 MVREGGIGSLYRGLLSPQAGFGVTFAISFAGYGQGTRF---FREGNTERDLTLGEMTAAGAWAGLLQSPSRQVFERVKSVMQVQKGGGGGDKAPYKWSGECVVQLVKKEGLYNGLFRGLDATVLRELPQFAVYYPIYELSIRALKEFHDTXXXXXXXXXXXXXXXXXXXXXXXGIAGTLQW---LPPFYCIDVLKSRMQSALPGVYSSVWDCAKKSYQTEGIGVFFRGLPVALIRAFPLHACIFFGYEVTLAALH 250
+++ GI LYRG+ +P A FA+SF Y G + R TER LTL E+T AGA++ + + ERVK +MQ+Q G G +A YK + V QL KEG +FRG AT+LR+ P A Y+ YEL + L G+AG W +PP DV+KSR+QSA G YS + DC +K+ + +G F+GL A++RAFP +A F G E +L A++
Sbjct: 68 IIKNDGILGLYRGMATPLASITPIFAVSFFSYDLGKKIATGLRSDKTERPLTLAEITFAGAFSAVPTTLFMAPSERVKVLMQIQ---GQGGEAKYKGPLDVVRQLY-KEGGVRSIFRGTGATLLRDSPGSAAYFLAYELIKKGL----------TPEGTKPDQLSLGSVIFAGGMAGVAMWSIAIPP----DVIKSRLQSAPAGTYSGMLDCLQKTIKVDGPRALFKGLGPAILRAFPANAATFVGVEYSLKAMN 304
BLAST of NO10G00920 vs. NCBI_GenBank
Match: XP_002505284.1 (mitochondrial carrier family, partial [Micromonas commoda] >ACO66542.1 mitochondrial carrier family, partial [Micromonas commoda]) HSP 1 Score: 138.3 bits (347), Expect = 3.500e-29 Identity = 98/250 (39.20%), Postives = 126/250 (50.40%), Query Frame = 0
Query: 1 MVREGGIGSLYRGLLSPQAGFGVTFAISFAGYGQGTRFFRE--GNTERDLTLGEM----TAAGAWAGLLQSPSRQVFERVKSVMQVQKGGGGGDKAPYKWSG--ECVVQLVKKEGLYNGLFRGLDATVLRELPQFAVYYPIYELSIRALKEFHDTXXXXXXXXXXXXXXXXXXXXXXXGIAGTLQWLPPFYCIDVLKSRMQSALPGVYSSVWDCAKKSYQTEGIGVFFRGLPVALIRAFPLHACIFFGYE 243
M REG + +LYRG+ +P +G+ A++F + + R R G + L + A GA AG S R ERVK+V QV + G K P K+ G L K+ GL G F G ATV RE+PQ AVY+ Y+ SIR E G AG +QW+ Y +DV+KSRMQ+ PG Y+ DCA KS + EG GVF RGL +AL+RAFPLHA IF E
Sbjct: 43 MQREGPM-ALYRGIGAPMVAYGLINAVAFTTHTEVVRLLRGELGGSGGSPLLKDPYLIGLAGGAAAGFTSSFVRGPAERVKTVQQVAESSCGTGKVPEKYRGTIRTAATLAKEHGLLKGWFTGTGATVAREIPQCAVYFLTYD-SIRHACE-----------KAAGPGYETAGIVLAGGSAGVVQWVAT-YPLDVIKSRMQAFPPGTYNGFLDCAMKSLRAEGPGVFVRGLEMALLRAFPLHASIFLTCE 278
BLAST of NO10G00920 vs. NCBI_GenBank
Match: ORX49513.1 (mitochondrial carrier [Hesseltinella vesiculosa]) HSP 1 Score: 136.7 bits (343), Expect = 1.000e-28 Identity = 94/259 (36.29%), Postives = 134/259 (51.74%), Query Frame = 0
Query: 1 MVREGGIGSLYRGLLSPQAGFGVTFAISFAGYGQGTRF---FREGNTERDLTLGEMTAAGAWAG----LLQSPSRQVFERVKSVMQVQKGGGGGDKAPYKWSGECVVQLVKKEGLYNGLFRGLDATVLRELPQFAVYYPIYELSIRALKEFHDTXXXXXXXXXXXXXXXXXXXXXXXGIAGTLQW---LPPFYCIDVLKSRMQSALPGVYSSVWDCAKKSYQTEGIGVFFRGLPVALIRAFPLHACIFFGYEVTLAALH 250
++++ G+ LYRG+ +P A FA+SF Y G + R TER L+LGE+T AGA++ LL PS ERVK V+Q Q GDK +K GE + L K+ G+ + +FRG AT+LR+ P A Y+ YEL + L G+AG W +PP DV+KSR+QSA G YS + DC +K+ + +G F+GL A++RAFP +A F G E +L A++
Sbjct: 69 IIKKDGVTGLYRGMSAPLASITPIFAVSFFSYDLGKKMALAMRSDKTERPLSLGEVTFAGAFSAVPTTLLMGPS----ERVKVVLQTQ-----GDK--FKGPGEVLKHLYKEGGMAS-IFRGTGATLLRDSPGSAAYFVAYELIKKGL----------TPEGAKPNDLSLGSVMFAGGMAGVAMWSIAIPP----DVIKSRLQSAPAGTYSGMLDCLQKTVRADGTKALFKGLGPAILRAFPANAATFVGVEYSLKAMN 301
BLAST of NO10G00920 vs. NCBI_GenBank
Match: CEP17344.1 (hypothetical protein [Parasitella parasitica]) HSP 1 Score: 136.0 bits (341), Expect = 1.700e-28 Identity = 92/257 (35.80%), Postives = 132/257 (51.36%), Query Frame = 0
Query: 1 MVREGGIGSLYRGLLSPQAGFGVTFAISFAGYGQGTRFF-----REGNTERDLTLGEMTAAGAWAGLLQSPSRQVFERVKSVMQVQKGGGGGDKAPYKWSGECVVQLVKKEGLYNGLFRGLDATVLRELPQFAVYYPIYELSIRALKEFHDTXXXXXXXXXXXXXXXXXXXXXXXGIAGTLQW---LPPFYCIDVLKSRMQSALPGVYSSVWDCAKKSYQTEGIGVFFRGLPVALIRAFPLHACIFFGYEVTLAALH 250
+VR+ GI LYRG+ +P A FA+SF Y G + + NT + L+L E+T AGA++ + + ERVK +MQ+Q G G + YK + V QL KEG ++RG AT+LR+ P A Y+ YEL ++L G+AG W +PP DVLKSR+QSA G YS + DC KK+ +T+G F+GL A++RAFP +A F G E ++ A++
Sbjct: 66 IVRKDGIFGLYRGMATPLASITPIFAVSFWSYDLGKKIVYGLRTDKDNTSKQLSLAEITFAGAFSAVPTTLFMAPSERVKVLMQIQ---GQGVEQKYKGPLDVVRQLY-KEGGVRSIWRGTGATLLRDSPGSAAYFVAYELIKKSL----------TPEGTRPEDLSFGAVLFAGGMAGVAMWTIAIPP----DVLKSRLQSAPAGTYSGLGDCLKKTIKTDGPAALFKGLGPAMLRAFPANAATFLGVEYSMRAMN 304
BLAST of NO10G00920 vs. NCBI_GenBank
Match: ORZ11812.1 (mitochondrial carrier domain-containing protein [Absidia repens]) HSP 1 Score: 134.8 bits (338), Expect = 3.800e-28 Identity = 89/256 (34.77%), Postives = 132/256 (51.56%), Query Frame = 0
Query: 1 MVREGGIGSLYRGLLSPQAGFGVTFAISFAGYGQGTRF---FREGNTERDLTLGEMTAAGAWAGLLQSPSRQVFERVKSVMQVQKGGGGGDKAPYKWSGEC-VVQLVKKEGLYNGLFRGLDATVLRELPQFAVYYPIYELSIRALKEFHDTXXXXXXXXXXXXXXXXXXXXXXXGIAGTLQW---LPPFYCIDVLKSRMQSALPGVYSSVWDCAKKSYQTEGIGVFFRGLPVALIRAFPLHACIFFGYEVTLAALH 250
+++ G+ LYRG+ +P A FA+SF Y G + R TER L+L E+TAAGA++ + + ER+K +MQ+Q G GG++ K+ G VV+ + KEG +FRG AT+LR+ P A Y+ YEL + L G+AG W +PP DV+KSR+QSA G YS + DC +K+ + +G F+G A++RAFP +A F G E +L A++
Sbjct: 68 IIKNDGVLGLYRGMATPLASITPIFAVSFFSYDLGKKIVTGIRSDKTERPLSLAEITAAGAFSAVPTTLFMAPSERIKVLMQIQ--GQGGEQ---KYKGPLDVVRQLYKEGGVRSIFRGTGATLLRDSPGSAAYFLAYELIKKGL----------TPEGTKPDQLSLGSVIFAGGMAGVAMWSIAIPP----DVIKSRLQSAPAGTYSGMMDCLQKTIKVDGPRALFKGFGPAVLRAFPANAATFVGVEYSLKAMN 304 The following BLAST results are available for this feature:
BLAST of NO10G00920 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO10G00920 ID=NO10G00920|Name=NO10G00920|organism=Nannochloropsis oceanica|type=gene|length=1808bpback to top protein sequence of NO10G00920.1 >NO10G00920.1-protein ID=NO10G00920.1-protein|Name=NO10G00920.1|organism=Nannochloropsis oceanica|type=polypeptide|length=311bpback to top protein sequence of NO10G00920.2 >NO10G00920.2-protein ID=NO10G00920.2-protein|Name=NO10G00920.2|organism=Nannochloropsis oceanica|type=polypeptide|length=262bpback to top Synonyms
Publications
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