NO10G00890, NO10G00890 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO10G00890 vs. NCBI_GenBank
Match: XP_005854417.1 (transducin wd40 domain-containing protein [Nannochloropsis gaditana CCMP526] >EKU21943.1 transducin wd40 domain-containing protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 485.3 bits (1248), Expect = 4.200e-133 Identity = 359/588 (61.05%), Postives = 385/588 (65.48%), Query Frame = 0 Query: 1 MKITTPQITWHGGEAGKNDPVLSADVHPCGVLATGGADAEVRLWLLHLDENEESKFQDYLYNFENHQRSVNSVRFSPNGRALATASDGGVIFVYLLPPGRPTRIWRQPKCQRLVICRLIRTTQSDIYDMAWAPTSEELCSVSVDNKVCVWDVTGEKSPLVNTFTSHSNYVQGVCWDPRDEYVLKLGHREGVGGEGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMDGKNEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPRPNLFADETVPSFFRRPAWSPDGCLLLTPTGLYRRPSLPDGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKTEFATHVYVRGAFARPALELPHPGNKASVVVRFCPQLFALSTRESKHQPSLPLSXXXXXXXXXXXXXXXXXXXXXLTDLPYRMVFAVLTVNAILVYDTQHHFPLAVIKNSHYAPLTDAAWVADGSALIATSMDGYVTV 589 MKITTPQITWHGGEAGKNDPVLSADVHPCGVLATGGADAEVRLWLLHLDENEESKFQDYLYNFENHQRSVNSVRFSP+GRALATASDGGVIFVYLLPPGRPTR WR+P CQR+V+CRL+RTTQSDIYD+AW+P+S ELCSVSVD+KV VWDVTGEKSPL++TFTSHSNYVQG CWDP DE+++ + + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +M XXXXXXXXXXXXXXXXXXXXXXXXXXXXX PR +LFADETVPSFFRRPAWSPDGCLLLTPTGL P G + T F+THVYVRGAFA+P LELPHPG KASVV ++ P P S LT+LPYRMVFAVLTV I VYDTQHHFPLAV+KNSHYAPLTDAAWV DGSAL+ TSMDGYVTV Sbjct: 1 MKITTPQITWHGGEAGKNDPVLSADVHPCGVLATGGADAEVRLWLLHLDENEESKFQDYLYNFENHQRSVNSVRFSPDGRALATASDGGVIFVYLLPPGRPTRFWRRPMCQRMVLCRLVRTTQSDIYDLAWSPSSRELCSVSVDSKVAVWDVTGEKSPLLSTFTSHSNYVQGACWDPADEFLVSQSNDRSCRVYVRKELRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREM--SKLVPVASSTPVVPVERKAGQGHRGGRHGGGKREDHVAGEHAPALKQAGTPVGKEGEEKKPEETGAVETELSGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKPASKRTPRLHLFADETVPSFFRRPAWSPDGCLLLTPTGLLP----PSG------------------------HRGGPEGDNKAGGDSAHTRFSTHVYVRGAFAKPVLELPHPGGKASVV--------------TEPSPDPPPS---------------------LTNLPYRMVFAVLTVGGIYVYDTQHHFPLAVVKNSHYAPLTDAAWVNDGSALVVTSMDGYVTV 523
BLAST of NO10G00890 vs. NCBI_GenBank
Match: EWM25324.1 (chromatin assembly factor 1 subunit b [Nannochloropsis gaditana]) HSP 1 Score: 454.9 bits (1169), Expect = 6.000e-124 Identity = 372/581 (64.03%), Postives = 400/581 (68.85%), Query Frame = 0 Query: 40 EVRLWLLHLDENEESKFQDYLYNFENHQRSVNSVRFSPNGRALATASDGGVIFVYLLPPGRPTRIWRQPKCQRLVICRLIRTTQSDIYDMAWAPTSEELCSVSVDNKVCVWDVTGEKSPLVNTFTSHSNYVQGVCWDPRDEYVLKLGHREGVGGEGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMDGKNEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPRPNLFADETVPSFFRRPAWSPDGCLLLTPTGLYRRPSLPDGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKTEFATHVYVRGAFARPALELPHPGNKASVVVRFCPQLFALSTRESKHQPSLP-------------LSXXXXXXXXXXXXXXXXXXXXXLTDLPYRMVFAVLTVNAILVYDTQHHFPLAVIKNSHYAPLTDAAWVADGSALIATSMDGYVTVVCFPEGEIGKALALEEVPG 608 + +LWLLHLDENEESKFQDYLYNFENHQRSVNSVRFSP+GRALATASDGGVIFVYLLPPGRPTR WR+P CQR+V+CRL+RTTQSDIYD+AW+P+S ELCSVSVD+KV VWDVTGEKSPL++TFTSHSNYVQG CWDP DE+++ + + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX M XXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX PR +LFADETVPSFFRRPAWSPDGCLLLTPTGL P G + T F+THVY RGAFA+P LELPHPG KASVVVRFCPQLFAL T+E K PSLP XXXXXXXXXXXXXXXXXXXXXLT+LPYRMVFAVLTV I VYDTQHHFPLAV+KNSHYAPLTDAAWV DGSAL+ TSMDGYVTVVC PEGE+G L LE+VPG Sbjct: 11 QFQLWLLHLDENEESKFQDYLYNFENHQRSVNSVRFSPDGRALATASDGGVIFVYLLPPGRPTRFWRRPMCQRMVLCRLVRTTQSDIYDLAWSPSSRELCSVSVDSKVAVWDVTGEKSPLLSTFTSHSNYVQGACWDPADEFLVSQSNDRSCRVYVRKELRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXM--SKLVPVASSTPVVPVERKAGQGHRGXXXXXXKREDHVAGEHAPALKQAGTPVGKEGEEKKPEETGAVETELSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKPASKRTPRLHLFADETVPSFFRRPAWSPDGCLLLTPTGLLP----PSG------------------------HRGGPEGDNKAGGDSAHTRFSTHVYARGAFAKPVLELPHPGGKASVVVRFCPQLFALKTQERKDLPSLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTNLPYRMVFAVLTVGGIYVYDTQHHFPLAVVKNSHYAPLTDAAWVNDGSALVVTSMDGYVTVVCLPEGELGAKLELEKVPG 561
BLAST of NO10G00890 vs. NCBI_GenBank
Match: CBJ29095.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 191.4 bits (485), Expect = 1.200e-44 Identity = 178/637 (27.94%), Postives = 237/637 (37.21%), Query Frame = 0 Query: 3 ITTPQITWHGGEAGKNDPVLSADVHPCG----------VLATGGADAEVRLWLLHLDENEE----------SKFQDYLYNFENHQRSVNSVRFSPNGRALATASDGGVIFVYLLPPGRPTRIWRQPKCQRLVICRLIRTTQSDIYDMAWAPTSEELCSVSVDNKVCVWDVTGEKSPLVNTFTSHSNYVQGVCWDPRDEYVLKLGHREGV--------GGEGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMDGKNEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPRPNLFADETVPSFFRRPAWSPDGCLLLTPTGLYRRPSLPDGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKTEFATHVYVRGAFARPALELPHPGNKASVVVRFCPQLFAL-----STRESKHQPSLPLSXXXXXXXXXXXXXXXXXXXXXLTDLPYRMVFAVLTVNAILVYDTQHHFPLAVIKNSHYAPLTDAAWVADGSALIATSMDGYVTVVCFPEGEIGKALALEEVP 607 + TPQI WHGGEAGKN P+LS D HP VLAT G DAEVRLW+++ E+ S+ Q ++ + HQR VN+VRFSP+G +LA+ASDGG + ++ + W K R ++R DIYDMAW+P S+ + S+D + VW+V ++S + T H+NYV GG XXXXX XXXXXXXXXX + G R NLF DETV SFFRR +WSPDG L+TPT + +T+F TH++ RG FA+PA+ L K SV VR P+LF L +TR + + + DLPYR VFAV++++A++VYDT+H PL V H + LTDA W +DG AL +S DGYV+ + F GE+G L +VP Sbjct: 4 VDTPQIVWHGGEAGKNAPILSLDTHPLALDGGHQGSRVVLATAGTDAEVRLWIVNRPTQEDAKNWEQAGVSSRLQTFVASLGGHQRGVNAVRFSPDGLSLASASDGGTVVIWSV---EDVAAWSTIKSDRDTRKNILRGATEDIYDMAWSPDSKYITCGSIDRRAHVWEVATKRS--IATLEDHANYVXXXXXXXXXXXXXXXXXXXXXXXXXXXQDGGXXXXXXXXGRVAVKCCNVIKSCVVPSDEXXXXXXXXXXEPPLPREGTTAPGERPSTVTSETGGDG--------------------------------------------------------AGCIQPTSSAVDARGSTTDDNQRSGGGDKGPSGGNEDSCATGVDSTKDKAKPVQRKNLFVDETVTSFFRRLSWSPDGAFLITPTAQH------------------------------------------WDAATRQTQFCTHLFTRGQFAKPAICLLGL-TKPSVAVRCNPRLFTLKGCGDNTRSEAVEEA-------------------------MCDLPYRAVFAVVSLDAVVVYDTEHATPLMVANGLHLSALTDACWSSDGLALFVSSTDGYVSKIHFEPGELGDTLPCSDVP 511
BLAST of NO10G00890 vs. NCBI_GenBank
Match: GAY04700.1 (chromatin assembly factor 1 subunit B-like protein [Pythium insidiosum]) HSP 1 Score: 169.9 bits (429), Expect = 3.900e-38 Identity = 150/614 (24.43%), Postives = 219/614 (35.67%), Query Frame = 0 Query: 1 MKITTPQITWHGGEAGKNDPVLSAD-VHPCG------VLATGGADAEVRLWLLHLDENEESKFQDYLYNFENHQRSVNSVRFSPNGRALATASDGGVIFVYLLPPGRPTRIWRQPKCQRLV-ICRLIRTT--QSDIYDMAWAPTSEELCSVSVDNKVCVWDVTGEKSPLVNTFTSHSNYVQGVCWDPRDEYVLKLGHREGVGGEGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMDGKNEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPRPNLFADETVPSFFRRPAWSPDGCLLLTPTGLYRRPSLPDGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKTEFATHVYVRGAFARPALELPHPGNKASVVVRFCPQLFALSTRESKHQPSLPLSXXXXXXXXXXXXXXXXXXXXXLTDLPYRMVFAVLTVNAILVYDTQHHFPLAVIKNSHYAPLTDAAWVADGSALIATSMDGYVTVVCFPEGEIGKALALEE 605 +++TTP+I WH G G N+ VLS D +H G +LATGGAD E++LW + D +E++ +++++ H+RSVN VRFSPNG LA+ASD + ++ P WR + R + + + DI D+AW+P S LCSVSVDN +W++ EK + H+ YVQGV WDP E+++ G+ D K E P+ +F D+T P F RR W+PDG LL PTG++R + + + + RG + PA+ LP KAS+ VR P L+ L S P++ R +FAV+T+NA+++YD+Q P+ IKN HYA LTDA W ADG L +SMDGYV+ + F +G G ++ E+ Sbjct: 18 VRVTTPEIRWHCGPTGLNEAVLSLDFLHAHGDGADHAILATGGADKEIKLWRVRPD-MKETEGLEFIFSLTGHERSVNCVRFSPNGLFLASASDDMSVTIWTKPKTAGDD-WRWDAITSFSDVTRTLLSCGHKGDITDLAWSPDSAFLCSVSVDNSSVIWNI--EKGEVQERRKDHTQYVQGVAWDPLGEFLVTEGN-------------------------DRTCRVYTLVGFDATSRQLSKKQNRKCTAMLTIKSREFSGDGPAKTE-----------------------------------------------------------------------------------------------SAAATGEEASKGPPKHRMFLDDTCPVFARRLTWTPDGNYLLVPTGVFREEE------------------------------------------SAPSVNTVYAFARGNMSMPAVHLPGQ-EKASLGVRCSPLLYRLREGGDVADGSSPIAVSSNFFQSES-----------------RSIFAVITLNAVIIYDSQQAHPICTIKNLHYADLTDATWSADGHLLSVSSMDGYVSFIQFEQGFFGVSIPHED 447
BLAST of NO10G00890 vs. NCBI_GenBank
Match: XP_022781338.1 (chromatin assembly factor 1 subunit B-like isoform X1 [Stylophora pistillata] >PFX31184.1 Chromatin assembly factor 1 subunit B [Stylophora pistillata]) HSP 1 Score: 169.1 bits (427), Expect = 6.600e-38 Identity = 154/613 (25.12%), Postives = 214/613 (34.91%), Query Frame = 0 Query: 1 MKITTPQITWHGGEAGKNDPVLSADVHPCGV---LATGGADAEVRLWLLHLDENEESKFQDYLYNFENHQRSVNSVRFSPNGRALATASDGGVIFVYLLPPG---RPTRIWRQ----PKCQRLVICRLIRTTQSDIYDMAWAPTSEELCSVSVDNKVCVWD-VTGEKSPLVNTFTSHSNYVQGVCWDPRDEYVLKLGHREGVGGEGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMDGKNEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPRPNLFADETVPSFFRRPAWSPDGCLLLTPTGLYRRPSLPDGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKTEFATHVYVRGAFARPALELPHPGNKASVVVRFCPQLFALSTRESKHQPSLPLSXXXXXXXXXXXXXXXXXXXXXLTDLPYRMVFAVLTVNAILVYDTQHHFPLAVIKNSHYAPLTDAAWVADGSALIATSMDGYVTVVCFPEGEIGKALAL 603 MK+ TP+I WHG E P+LS D G LAT GAD +V++W + + +++ D+L N H ++VN V+FSP LA+ D +I ++ L T I+ P + + +R DIYD+ W+P + S SVDN +WD V G+K ++ H +YVQGVCWDP +YV+ ++G + +F DET+PSFFRRP++SPDG LLL P G R + D T+V+ RG+ +P L LP P KA+V VR CP LF L E + + + LPYRMVF+V T+++IL+YDTQ P I N HYA LTD W +DGS L+A+S DGY T+V F EGE+G +L Sbjct: 1 MKLNTPEIAWHGKE-----PILSVDFSKVGSKWRLATAGADNDVKIWSIACGDGQKTVI-DFLANLSRHTKAVNVVKFSPKDEILASGGDDSMIILWKLNNSGERNTTDIFMDADEIPNKESWTFHKALRGHIEDIYDLQWSPDGNNIISGSVDNSAIIWDIVKGQKLVILK---DHKHYVQGVCWDPLGQYVV--------------------------------------------TNSSDRSCRLYNPNSYRCCYNITKLLVNGSQKPTENGEAF----------------------------------------------------------------------------------------------------KHGKMFHDETLPSFFRRPSFSPDGSLLLVPAG---RLEVGDQIIN-----------------------------------------TTYVFTRGSPNKPVLYLPSP-QKATVAVRCCPILFELRQAEGDGKSA-----------------------KSIFKLPYRMVFSVATIDSILLYDTQQAAPFGYITNIHYAALTDLTWSSDGSMLVASSSDGYCTIVHFKEGELGVPCSL 392
BLAST of NO10G00890 vs. NCBI_GenBank
Match: KFK28153.1 (hypothetical protein AALP_AA8G479400 [Arabis alpina]) HSP 1 Score: 168.3 bits (425), Expect = 1.100e-37 Identity = 144/604 (23.84%), Postives = 213/604 (35.26%), Query Frame = 0 Query: 1 MKITTPQITWHGGEAGKNDPVLSADVHP-CGVLATGGADAEVRLWLLHLDENEES-KFQDYLYNFENHQRSVNSVRFSPNGRALATASDGGVIFVYLLPPGRPTRIWRQPKCQRLVICRLIRTTQSDIYDMAWAPTSEELCSVSVDNKVCVWDVTGEKSPLVNTFTSHSNYVQGVCWDPRDEYVLKLGHREGVGGEGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMDGKNEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPRPNLFADETVPSFFRRPAWSPDGCLLLTPTGLYRRPSLPDGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKTEFATHVYVRGAFARPALELPHPGNKASVVVRFCPQLFALSTRESKHQPSLPLSXXXXXXXXXXXXXXXXXXXXXLTDLPYRMVFAVLTVNAILVYDTQHHFPLAVIKNSHYAPLTDAAWVADGSALIATSMDGYVTVVCFPEGEIGKALAL 603 MK T QI+WH G+ PVL+ D HP G+LAT GAD +++LWL++ + E+ Y + H +VN++RFS +G LA+ +DGG + ++ L P ++ W+ + + + + D+ D+ W+P L S SVDN +WDV K + +H +YVQGV WDP +YV L G+ + +LF DET+PSFFRR +WSPDG LL P G ++ S+ AT+V+ R +RPAL+LP NK VVVRFCP F L S+ LPYR+VFA+ T+N++ +YDT+ P+AV+ HYA +TD W DG+ L +S DGY T+V F + E+G+++++ Sbjct: 1 MKGGTIQISWHDGK-----PVLTLDFHPISGLLATAGADYDIKLWLMNSGKAEKKLPSVSYQSSLTYHGCAVNTIRFSRSGELLASGADGGELIIWKLHPSETSQSWK--------VLKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDV--NKGSVHQILDAHCHYVQGVAWDPLAKYVASLS---------------------------------------------------SDRTCRIYVNKPQTKSKSGEK---------------------------------------------------------------------------------------MNYVCQHVITKADQQQGDDAKTVKTHLFHDETLPSFFRRLSWSPDGSFLLIPAGSFK------------------------------------------ISPTSEAVNATYVFSRNDLSRPALQLP-GANKPVVVVRFCPVAFKLRGSNSEE---------------------------GFFKLPYRLVFAIATLNSVYIYDTECVAPIAVLAGLHYAAITDITWSPDGTYLALSSQDGYCTLVEFEDNELGESVSI 381
BLAST of NO10G00890 vs. NCBI_GenBank
Match: GBG31626.1 (Chromatin assembly factor 1 subunit FAS2 [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 166.4 bits (420), Expect = 4.300e-37 Identity = 159/651 (24.42%), Postives = 218/651 (33.49%), Query Frame = 0 Query: 1 MKITTPQITWHGGEAGKNDPVLSADVHP-CGVLATGGADAEVRLWLLHLDENEESKFQDYLYNFENHQRSVNSVRFSPNGRALATASDGGVIFVYLLPPGRP------------------------------------TRIWRQPKCQRLVICRLIRTTQSDIYDMAWAPTSEELCSVSVDNKVCVWDVTGEKSPLVNTFTSHSNYVQGVCWDPRDEYVLKLGHREGVGGEGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMDGKNEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPRPNLFADETVPSFFRRPAWSPDGCLLLTPTGLYRRPSLPDGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKTEFATHVYVRGAFARPALELPHPGNKASVVVRFCPQLFALSTRESKHQPSLPLSXXXXXXXXXXXXXXXXXXXXXLTDLPYRMVFAVLTVNAILVYDTQHHFPLAVIKNSHYAPLTDAAWVADGSALIATSMDGYVTVVCFPEGEIGKALALEEVPGEGCVGWE 615 M++ TP+I H E GKN PV + DVHP V+ TGG+D E++ W + ES F ++ F+ H +SVN+ RFSPNG LAT SD G + V L P P T W + + ++ V + +R SD+ D+AWA S L S SVD V VWD G L+ TF H ++VQGV WDP + V + G NE + +F +TVP+ RR AWSPDG LLLTPTG R T FA ++RG + P + P G KASV +RF P +AL +P + ++PYRMVFAV+T+++I +YDTQH + +A + H+A LTD +W DG L+ +S DGY +++ EGEIG L +VP G+E Sbjct: 1 MRVATPEIALHVDEHGKNGPVYAVDVHPKLAVMVTGGSDNEIKFWSFDETKEGESPF-TFVCGFQAHHKSVNAARFSPNGALLATCSDDGTVCV--LRPEEPRALMDVDEAPKTDPDDALVTVRPGATNAAEDGAGPATHGWERVRDEKDVKRKFLRGHTSDVSDLAWASDSRLLASGSVDGAVLVWD--GRDGKLLQTFHEHGHFVQGVAWDPFRNFFATCSADRTVKVFKRRLAKSTRKKKAKLKA--------------------------------------------GTNENDTDQGEVKDAAAGSAGATDAKEFAPRFVCAHELSTRQFPEKSAPAPAPSSSPKADNAESSRDSTSKLR----------------------------------------KRIMFEADTVPTMVRRLAWSPDGVLLLTPTGRIR--------------------------------------------AGQPTSFA---FMRGGWQTPIMHFPGAG-KASVAIRFSPVFYAL-------RPGV----------------------KPWLNVPYRMVFAVVTLDSIFIYDTQHRYAIAAAEQLHFAELTDVSWSGDGRVLVVSSRDGYCSLISTAEGEIGTRLTGTKVPAVARPGFE 485
BLAST of NO10G00890 vs. NCBI_GenBank
Match: EFH41170.1 (hypothetical protein ARALYDRAFT_496675 [Arabidopsis lyrata subsp. lyrata]) HSP 1 Score: 165.6 bits (418), Expect = 7.300e-37 Identity = 148/617 (23.99%), Postives = 217/617 (35.17%), Query Frame = 0 Query: 1 MKITTPQITWHGGEAGKNDPVLSADVHP-CGVLATGGADAEVRLWLLHLDENEES-KFQDYLYNFENHQRSVNSVRFSPNGRALATASDGGVIFVYLLPPGRPTRIWRQPKCQRLVICRLIRTTQSDIYDMAWAPTSEELCSVSVDNKVCVWDVTGEKSPLVNTFTSHSNYVQGVCWDPRDEYVLKLGHREGVGGEGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMDGKNEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPRPNLFADETVPSFFRRPAWSPDGCLLLTPTGLYRRPSLPDGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKTEFATHVYVRGAFARPALELPHPGNKASVVVRFCPQLFALSTRESKHQPSLPLSXXXXXXXXXXXXXXXXXXXXXLTDLPYRMVFAVLTVNAILVYDTQHHFPLAVIKNSHYAPLTDAAWVADGSALIATSMDGYVTVVCFPEGEIGKALALEEVPGEGCVGWEE 616 MK T QI+WH G+ PVL+ D HP G+LAT GAD +++LWL++ + E+ Y + H +VN++RFSP+G LA+ +DGG +F++ L P + W+ + + + + D+ D+ W+ L S SVDN +WDV+ K + +H +YVQGV WDP +YV L D +E + +LF DET+PSFFRR +WSPDG LL P G ++ S+ AT+V+ R +RPAL+LP +K VVVRFCP F L S+ LPYR+VFA+ T+N++ +YDT+ P+AV+ HYA +TD W + S L +S DGY T+V F + E+G+++ + G V EE Sbjct: 1 MKGGTIQISWHDGK-----PVLTLDFHPISGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWK--------VHKSLSFHRKDVLDLQWSLDDAYLISGSVDNSCIIWDVS--KGTVHQILDAHCHYVQGVAWDPLAKYVASLS---------------------------------SDRTCRIYVNKPQTKSKGVEKLNYVCQHVITKADQQRGDETKTI---------------------------------------------------------------------------------------------------------KTHLFHDETLPSFFRRLSWSPDGSFLLIPAGSFK------------------------------------------VSPTSEAVNATYVFSRKDLSRPALQLP-GASKPVVVVRFCPVAFKLRGSHSEE---------------------------GFFKLPYRLVFAIATLNSVYIYDTECVAPIAVLAGLHYAAITDITWSPNASYLALSSQDGYCTLVEFEDNELGESIPISITVGRKPVDAEE 394
BLAST of NO10G00890 vs. NCBI_GenBank
Match: XP_020885850.1 (chromatin assembly factor 1 subunit FAS2 [Arabidopsis lyrata subsp. lyrata]) HSP 1 Score: 164.9 bits (416), Expect = 1.200e-36 Identity = 144/604 (23.84%), Postives = 213/604 (35.26%), Query Frame = 0 Query: 1 MKITTPQITWHGGEAGKNDPVLSADVHP-CGVLATGGADAEVRLWLLHLDENEES-KFQDYLYNFENHQRSVNSVRFSPNGRALATASDGGVIFVYLLPPGRPTRIWRQPKCQRLVICRLIRTTQSDIYDMAWAPTSEELCSVSVDNKVCVWDVTGEKSPLVNTFTSHSNYVQGVCWDPRDEYVLKLGHREGVGGEGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMDGKNEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPRPNLFADETVPSFFRRPAWSPDGCLLLTPTGLYRRPSLPDGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKTEFATHVYVRGAFARPALELPHPGNKASVVVRFCPQLFALSTRESKHQPSLPLSXXXXXXXXXXXXXXXXXXXXXLTDLPYRMVFAVLTVNAILVYDTQHHFPLAVIKNSHYAPLTDAAWVADGSALIATSMDGYVTVVCFPEGEIGKALAL 603 MK T QI+WH G+ PVL+ D HP G+LAT GAD +++LWL++ + E+ Y + H +VN++RFSP+G LA+ +DGG +F++ L P + W+ + + + + D+ D+ W+ L S SVDN +WDV+ K + +H +YVQGV WDP +YV L D +E + +LF DET+PSFFRR +WSPDG LL P G ++ S+ AT+V+ R +RPAL+LP +K VVVRFCP F L S+ LPYR+VFA+ T+N++ +YDT+ P+AV+ HYA +TD W + S L +S DGY T+V F + E+G+++ + Sbjct: 1 MKGGTIQISWHDGK-----PVLTLDFHPISGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWK--------VHKSLSFHRKDVLDLQWSLDDAYLISGSVDNSCIIWDVS--KGTVHQILDAHCHYVQGVAWDPLAKYVASLS---------------------------------SDRTCRIYVNKPQTKSKGVEKLNYVCQHVITKADQQRGDETKTI---------------------------------------------------------------------------------------------------------KTHLFHDETLPSFFRRLSWSPDGSFLLIPAGSFK------------------------------------------VSPTSEAVNATYVFSRKDLSRPALQLP-GASKPVVVVRFCPVAFKLRGSHSEE---------------------------GFFKLPYRLVFAIATLNSVYIYDTECVAPIAVLAGLHYAAITDITWSPNASYLALSSQDGYCTLVEFEDNELGESIPI 381
BLAST of NO10G00890 vs. NCBI_GenBank
Match: XP_018492868.1 (PREDICTED: chromatin assembly factor 1 subunit FAS2 isoform X2 [Raphanus sativus]) HSP 1 Score: 164.1 bits (414), Expect = 2.100e-36 Identity = 145/607 (23.89%), Postives = 210/607 (34.60%), Query Frame = 0 Query: 1 MKITTPQITWHGGEAGKNDPVLSADVHP-CGVLATGGADAEVRLWLLHLDENEES-KFQDYLYNFENHQRSVNSVRFSPNGRALATASDGGVIFVYLLPPGRPTRIWRQPKCQRLVICRLIRTTQSDIYDMAWAPTSEELCSVSVDNKVCVWDVTGEKSPLVNTFTSHSNYVQGVCWDPRDEYVLKLGHREGVGGEGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMDGKNEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPRPNLFADETVPSFFRRPAWSPDGCLLLTPTGLYRRPSLPDGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKTEFATHVYVRGAFARPALELPHPGNKASVVVRFCPQLFALSTRESKHQPSLPLSXXXXXXXXXXXXXXXXXXXXXLTDLPYRMVFAVLTVNAILVYDTQHHFPLAVIKNSHYAPLTDAAWVADGSALIATSMDGYVTVVCFPEGEIGKALALEEV 606 MK T QI+WH G+ PVL+ D HP G+LAT GAD +++LWLL+ + E+ Y + H +VN++RFS +G LA+ +DGG + ++ L P + W+ + + + + D+ D+ W+P L S SVDN +WDV K +H +YVQGV WDP +YV L G+ + +LF DET+PSFFRR +WSPDG LL P+G ++ S+ AT+V+ R +RPAL+LP NK VVVRFCP F L S+ LPYR+VFA+ T+N++ +YDT+ P+AV+ HYA +TD W S L +S DGY T+V F + E+G+ +++ V Sbjct: 1 MKGGTIQISWHDGK-----PVLTLDFHPISGLLATAGADYDIKLWLLNSGQAEKKLPSVSYQSSLTYHGCAVNTIRFSRSGELLASGADGGELIIWKLHPSETNQSWK--------VHKSLSFHRKDVLDLQWSPDDGFLISGSVDNSCIIWDV--NKGSXXXXLDAHCHYVQGVAWDPLSKYVASLS---------------------------------------------------SDRTCRIYLNKPQAKSKSGEK---------------------------------------------------------------------------------------MNYVCQHVITKADHQRGDDTKTVKTHLFHDETLPSFFRRLSWSPDGSFLLIPSGSFK------------------------------------------LSPTSEAVNATYVFSRKDLSRPALQLP-GANKPVVVVRFCPVAFKLRGSSSEE--------------------------GGFFKLPYRIVFAIATLNSVYIYDTECVAPIAVLAGLHYAAITDVTWSPTASYLALSSQDGYCTLVEFEDNELGEPVSISAV 385 The following BLAST results are available for this feature:
BLAST of NO10G00890 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO10G00890 ID=NO10G00890|Name=NO10G00890|organism=Nannochloropsis oceanica|type=gene|length=4235bpback to top protein sequence of NO10G00890.1 >NO10G00890.1-protein ID=NO10G00890.1-protein|Name=NO10G00890.1|organism=Nannochloropsis oceanica|type=polypeptide|length=939bpback to top Synonyms
Publications
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