NO10G00860, NO10G00860 (gene) Nannochloropsis oceanica

Overview
NameNO10G00860
Unique NameNO10G00860
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length978
Alignment locationchr10:276503..277480 -

Link to JBrowse

Properties
Property NameValue
DescriptionTranslation initiation factor eif-2b subunit alpha
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:276503..277480 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0044237cellular metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR037171NagB/RpiA_transferase-like
IPR000649IF-2B-related
Vocabulary: Molecular Function
TermDefinition
GO:0008135translation factor activity, RNA binding
Homology
BLAST of NO10G00860 vs. NCBI_GenBank
Match: XP_002997632.1 (translation initiation factor eIF-2B subunit alpha, putative [Phytophthora infestans T30-4] >EEY68074.1 translation initiation factor eIF-2B subunit alpha, putative [Phytophthora infestans T30-4])

HSP 1 Score: 247.3 bits (630), Expect = 6.600e-62
Identity = 147/336 (43.75%), Postives = 194/336 (57.74%), Query Frame = 0
Query:    1 MSNSRAVTIMGIQNDLQEATKKL-----IDYERQMSRGRASISFRAGVELFFRYATRNNDDVPDFNALNQLFITRGNRFVANALKSREVIAELGHNFVQDGMVILMHGRSEVVTGVLTRAAQNNKNFTVMITEGRPEGSGFKAAERLTEVGIPVTVILDSAAGYFMERVDIVLLGAEGVVESGGIVNKIGTCQIAMVAKLYNKPLYVAAESYKFARLYPLTQADLEENIDNDLNRPLVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGGNVGFESGSVAG------VAAMVTTQNPSCDYTPATYISLLFTDLGILTPAAVSDELIKLYQ 326
            ++ S A T+M ++ +LQEA ++L      D +   +R   SI+  AG +LF RY TR   +  DF+      I RG  F   +L SR+ I+++GHNF++DGM +L HG+S VV  +L  AA+  KNF+V +TEGR   SG   AE L + GIP TVILDSA  Y+ME++DIV++GAEGVVE+GGIVN IGT  IA++A+  NK  YVAAESYKFARLYPLTQ D+ +                                                 +   SG+VAG          V+  +P  DYTP  YI+L+FTDLG+LTP+AVSDELIKLYQ
Sbjct:   33 ITRSEASTMMQMEGELQEAAQQLRHFQAADDKASATRFHNSIATTAGCQLFLRYVTRCFLEFDDFDLCRSQLIDRGKLFAETSLSSRKRISDVGHNFIRDGMKVLTHGKSRVVIALLREAAK-TKNFSVFVTEGRSNASGVSTAEELAKAGIPTTVILDSAVAYYMEQMDIVIVGAEGVVENGGIVNSIGTYSIAVIAQALNKQFYVAAESYKFARLYPLTQRDVPQK-----------------------------------------------QMAAISGAVAGGEPTDETMKNVSFASPFFDYTPPGYIALMFTDLGVLTPSAVSDELIKLYQ 320          
BLAST of NO10G00860 vs. NCBI_GenBank
Match: ETL26437.1 (hypothetical protein L916_19893 [Phytophthora parasitica] >ETP02462.1 hypothetical protein F441_20474 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 246.9 bits (629), Expect = 8.600e-62
Identity = 147/336 (43.75%), Postives = 193/336 (57.44%), Query Frame = 0
Query:    1 MSNSRAVTIMGIQNDLQEATKKL-----IDYERQMSRGRASISFRAGVELFFRYATRNNDDVPDFNALNQLFITRGNRFVANALKSREVIAELGHNFVQDGMVILMHGRSEVVTGVLTRAAQNNKNFTVMITEGRPEGSGFKAAERLTEVGIPVTVILDSAAGYFMERVDIVLLGAEGVVESGGIVNKIGTCQIAMVAKLYNKPLYVAAESYKFARLYPLTQADLEENIDNDLNRPLVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGGNVGFESGSVAG------VAAMVTTQNPSCDYTPATYISLLFTDLGILTPAAVSDELIKLYQ 326
            ++ S A T+M ++ +LQEA ++L      D +   +R   SI+  AG +LF RY TR   +  DF+      I RG  F   +L SR+ I+++GHNF++DGM +L HG+S VV  +L  AA+  KNF+V +TEGR   SG   AE L + GIP TVILDSA  Y+ME+VDIV++GAEGVVE+GGIVN IGT  IA++A+  NK  YVAAESYKFARLYPLTQ D+ +                                                 +   SG +AG          V+  +P  DYTP  YI+L+FTDLG+LTP+AVSDELIKLYQ
Sbjct:   33 ITRSEASTMMQMEGELQEAAQQLRVFQAADDKASATRFHNSIATTAGCQLFLRYVTRCFLEFDDFDLCRSQLIDRGKLFAETSLSSRKRISDVGHNFIRDGMKVLTHGKSRVVIALLREAAK-TKNFSVFVTEGRSNASGVSTAEELAKAGIPTTVILDSAVAYYMEQVDIVIVGAEGVVENGGIVNSIGTYSIAVIAQALNKQFYVAAESYKFARLYPLTQRDVPQK-----------------------------------------------QMAAISGDLAGGEPTDETMRNVSFASPFFDYTPPGYIALMFTDLGVLTPSAVSDELIKLYQ 320          
BLAST of NO10G00860 vs. NCBI_GenBank
Match: XP_008897890.1 (hypothetical protein PPTG_05904 [Phytophthora parasitica INRA-310] >ETI32627.1 hypothetical protein F443_20602 [Phytophthora parasitica P1569] >ETK72998.1 hypothetical protein L915_20015 [Phytophthora parasitica] >ETL79656.1 hypothetical protein L917_19758 [Phytophthora parasitica] >ETM32897.1 hypothetical protein L914_19799 [Phytophthora parasitica] >ETN16780.1 hypothetical protein PPTG_05904 [Phytophthora parasitica INRA-310] >ETO61357.1 hypothetical protein F444_20615 [Phytophthora parasitica P1976] >ETP30630.1 hypothetical protein F442_20412 [Phytophthora parasitica P10297])

HSP 1 Score: 245.7 bits (626), Expect = 1.900e-61
Identity = 146/336 (43.45%), Postives = 193/336 (57.44%), Query Frame = 0
Query:    1 MSNSRAVTIMGIQNDLQEATKKL-----IDYERQMSRGRASISFRAGVELFFRYATRNNDDVPDFNALNQLFITRGNRFVANALKSREVIAELGHNFVQDGMVILMHGRSEVVTGVLTRAAQNNKNFTVMITEGRPEGSGFKAAERLTEVGIPVTVILDSAAGYFMERVDIVLLGAEGVVESGGIVNKIGTCQIAMVAKLYNKPLYVAAESYKFARLYPLTQADLEENIDNDLNRPLVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGGNVGFESGSVAG------VAAMVTTQNPSCDYTPATYISLLFTDLGILTPAAVSDELIKLYQ 326
            ++ S A T+M ++ +LQEA ++L      D +   +R   SI+  AG +LF RY TR   +  DF+      I RG  F   +L SR+ I+++GHNF++DGM +L HG+S VV  +L  AA+  KNF+V +TEGR   SG   AE L + GIP TVILDSA  Y+ME++DIV++GAEGVVE+GGIVN IGT  IA++A+  NK  YVAAESYKFARLYPLTQ D+ +                                                 +   SG +AG          V+  +P  DYTP  YI+L+FTDLG+LTP+AVSDELIKLYQ
Sbjct:   33 ITRSEASTMMQMEGELQEAAQQLRVFQAADDKASATRFHNSIATTAGCQLFLRYVTRCFLEFDDFDLCRSQLIDRGKLFAETSLSSRKRISDVGHNFIRDGMKVLTHGKSRVVIALLREAAK-TKNFSVFVTEGRSNASGVSTAEELAKAGIPTTVILDSAVAYYMEQMDIVIVGAEGVVENGGIVNSIGTYSIAVIAQALNKQFYVAAESYKFARLYPLTQRDVPQK-----------------------------------------------QMAAISGDLAGGEPTDETMRNVSFASPFFDYTPPGYIALMFTDLGVLTPSAVSDELIKLYQ 320          
BLAST of NO10G00860 vs. NCBI_GenBank
Match: XP_024578466.1 (protein [Plasmopara halstedii] >CEG42097.1 protein [Plasmopara halstedii])

HSP 1 Score: 245.7 bits (626), Expect = 1.900e-61
Identity = 143/333 (42.94%), Postives = 196/333 (58.86%), Query Frame = 0
Query:    4 SRAVTIMGIQNDLQEATKKL-----IDYERQMSRGRASISFRAGVELFFRYATRNNDDVPDFNALNQLFITRGNRFVANALKSREVIAELGHNFVQDGMVILMHGRSEVVTGVLTRAAQNNKNFTVMITEGRPEGSGFKAAERLTEVGIPVTVILDSAAGYFMERVDIVLLGAEGVVESGGIVNKIGTCQIAMVAKLYNKPLYVAAESYKFARLYPLTQADLEENIDNDLNRPLVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGGNVGFESGSVAGVAAM------VTTQNPSCDYTPATYISLLFTDLGILTPAAVSDELIKLYQ 326
            S A T+M ++++LQ A ++L      D + + +R   SI+  AG +LF RY TR   +  DF+      I RG  F   +L SR+ I+++GHNF++DGM +L HG+S VV  +L  AA+  KNF+V +TEGR  GSG + AE L + GIP TVILDSA  Y+ME++DIV++GAEGVVE+GGIVN +GT  IA++A+   K  YVAAESYKFARLYPLTQ D+ +                                                 +G  + ++AG  A+      ++  +P  DYTP  YI+L+FTDLG+LTP+AVSDELIKLYQ
Sbjct:   37 SEASTMMQMESELQAAAQQLRAFQAADDDARATRFHNSIATTAGCQLFLRYVTRCFLEFDDFDLCRSQLIDRGKLFAETSLSSRKRISDVGHNFIRDGMKVLTHGKSRVVIALLREAAR-TKNFSVFVTEGRSNGSGVRTAEELAKAGIPTTVILDSAVAYYMEQIDIVIVGAEGVVENGGIVNSVGTYSIAVIAQALKKQFYVAAESYKFARLYPLTQRDVPQK-----------------------------------------------QMGAITSNMAGGEAIDEAVGHISFTSPFFDYTPPGYIALMFTDLGVLTPSAVSDELIKLYQ 321          
BLAST of NO10G00860 vs. NCBI_GenBank
Match: XP_009032787.1 (hypothetical protein AURANDRAFT_35783 [Aureococcus anophagefferens] >EGB13196.1 hypothetical protein AURANDRAFT_35783 [Aureococcus anophagefferens])

HSP 1 Score: 243.0 bits (619), Expect = 1.200e-60
Identity = 140/318 (44.03%), Postives = 188/318 (59.12%), Query Frame = 0
Query:   11 GIQNDLQEATKKLIDY-ERQMS--RGRASISFRAGVELFFRYATRNNDDVPDFNALNQLFITRGNRFVANALKSREVIAELGHNFVQDGMVILMHGRSEVVTGVLTRAAQNNKNFTVMITEGRPEGSGFKAAERLTEVGIPVTVILDSAAGYFMERVDIVLLGAEGVVESGGIVNKIGTCQIAMVAKLYNKPLYVAAESYKFARLYPLTQADLEENIDNDLNRPLVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGGNVGFESGSVAGVAAMVTTQNPSCDYTPATYISLLFTDLGILTPAAVSDELIKLYQ 326
            G+  +L+ A  KL+ + E Q +  RGR  IS  +G ELF R+ TR   +  DF+   ++   RG+ F   +  SR  IAELGH FV+DG  +L+HGRS V T +L +AA+  K+F+V +TEGR +G+G   A  L  +G+P T+ILD+A  Y+ME VD+VL+GAEGV+E+GG++NK+GT  +A  AK   KP+YVAAESYKFARLYPL Q DL E+  + +  PL                                                   A V  ++P+CDYTP  +I+LLFTDLGILTPAAVSDELI+LYQ
Sbjct:    3 GLDEELRLARDKLLAFCETQPACLRGRTVISVSSGSELFLRHVTRTFLEFEDFDECKRMLGARGSSFARQSEASRARIAELGHAFVRDGAAVLVHGRSRVATALLAKAAE-TKHFSVFVTEGRLDGAGVDYASDLAALGVPTTMILDTAVAYYMENVDVVLVGAEGVMENGGVINKVGTLTVATCAKAMRKPVYVAAESYKFARLYPLNQRDLPESHAHTVALPL----------------------------------------------PESAHADVVAKSPACDYTPPQFITLLFTDLGILTPAAVSDELIRLYQ 273          
BLAST of NO10G00860 vs. NCBI_GenBank
Match: GAQ87864.1 (eukaryotic translation initiation factor eIF-2B alpha subunit [Klebsormidium nitens])

HSP 1 Score: 242.7 bits (618), Expect = 1.600e-60
Identity = 143/326 (43.87%), Postives = 192/326 (58.90%), Query Frame = 0
Query:    1 MSNSRAVTIMGIQNDLQEATKKLIDYERQMSRGRASISFRAGVELFFRYATRNND-DVPDFNALNQLFITRGNRFVANALKSREVIAELGHNFVQDGMVILMHGRSEVVTGVLTRAAQNNKNFTVMITEGRPEGSGFKAAERLTEVGIPVTVILDSAAGYFMERVDIVLLGAEGVVESGGIVNKIGTCQIAMVAKLYNKPLYVAAESYKFARLYPLTQADLE-ENIDNDLNRPLVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGGNVGFESGSVAGVAAMVTTQNPSCDYTPATYISLLFTDLGILTPAAVSDELIKLY 325
            +  S+A T+MG++ +L+ A+++L        R ++SIS  AG ELF R+ TR +  +  D NA  +  I RG +F   ++K+R+ I+++G +FV+DG  IL HG S VV  +L  AA   K+F+V+  EGRP+G G + A  LT VGIPVT+ILD+   Y MERVD+VL GAEGVVESGGI+N +GT QIA+VA+ +NKP+YVAAESYKFARLYPL Q DL  +        PL P                                                   +   NPS DYTP + ++LLFTDLG+LTP+AVSDELI+LY
Sbjct:   81 IKRSKATTMMGLEIELKRASEEL------KEREKSSISLAAGCELFLRFVTRTSALEHEDINAGKERLIERGEQFSEISIKARQTISKVGADFVRDGCTILTHGVSRVVVSLLKLAASQGKHFSVICPEGRPDGKGIQTARELTAVGIPVTLILDTGVAYVMERVDMVLCGAEGVVESGGIINNLGTYQIAVVARAFNKPVYVAAESYKFARLYPLDQRDLPYDPKPVTFAEPLPPN--------------------------------------------------MKVDNPSRDYTPPSCLTLLFTDLGVLTPSAVSDELIQLY 350          
BLAST of NO10G00860 vs. NCBI_GenBank
Match: XP_002990361.1 (translation initiation factor eIF-2B subunit alpha [Selaginella moellendorffii] >XP_002979390.2 translation initiation factor eIF-2B subunit alpha [Selaginella moellendorffii] >EFJ08630.1 hypothetical protein SELMODRAFT_131440 [Selaginella moellendorffii])

HSP 1 Score: 240.7 bits (613), Expect = 6.200e-60
Identity = 144/325 (44.31%), Postives = 191/325 (58.77%), Query Frame = 0
Query:    1 MSNSRAVTIMGIQNDLQEATKKLIDYERQMSRGRASISFRAGVELFFRYATRNND-DVPDFNALNQLFITRGNRFVANALKSREVIAELGHNFVQDGMVILMHGRSEVVTGVLTRAAQNNKNFTVMITEGRPEGSGFKAAERLTEVGIPVTVILDSAAGYFMERVDIVLLGAEGVVESGGIVNKIGTCQIAMVAKLYNKPLYVAAESYKFARLYPLTQADLEENIDNDLNRPLVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGGNVGFESGSVAGVAAMVTTQNPSCDYTPATYISLLFTDLGILTPAAVSDELIKLY 325
            +  S+A T+MG++ +L+ A++ L  ++      R+SIS  AG +LF RY TR +  +  D NA     I RG RF   +LK+RE IA LG +FVQDG  IL+HG S VV  +L  AA N KNFTV++TEG P+ +G + +++L+  GIPVTVI+DSA  Y M+RVD+VL+GA+GVVESGGI+N IGT Q+A++A    +P YVAAES+KFARLYPL Q DL                                                  + G E  S           NP+ DYTP  Y++LLFTDLG+LTP+AVSDELI+LY
Sbjct:   36 IQRSQASTMMGLEIELKNASEMLKAWD------RSSISLSAGCDLFMRYVTRTSALEYEDINAGKSRLIERGERFGDISLKARETIALLGQDFVQDGCCILVHGSSRVVLALLKLAANNGKNFTVIVTEGGPKKTGMEVSKKLSAAGIPVTVIVDSAVAYTMDRVDMVLVGADGVVESGGIINVIGTFQVALIAHSMKRPFYVAAESFKFARLYPLDQQDLSI------------------------------------------------STGQEESS-----------NPARDYTPPHYLTLLFTDLGVLTPSAVSDELIQLY 295          
BLAST of NO10G00860 vs. NCBI_GenBank
Match: EFJ19798.1 (hypothetical protein SELMODRAFT_177636 [Selaginella moellendorffii])

HSP 1 Score: 240.7 bits (613), Expect = 6.200e-60
Identity = 144/325 (44.31%), Postives = 191/325 (58.77%), Query Frame = 0
Query:    1 MSNSRAVTIMGIQNDLQEATKKLIDYERQMSRGRASISFRAGVELFFRYATRNND-DVPDFNALNQLFITRGNRFVANALKSREVIAELGHNFVQDGMVILMHGRSEVVTGVLTRAAQNNKNFTVMITEGRPEGSGFKAAERLTEVGIPVTVILDSAAGYFMERVDIVLLGAEGVVESGGIVNKIGTCQIAMVAKLYNKPLYVAAESYKFARLYPLTQADLEENIDNDLNRPLVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGGNVGFESGSVAGVAAMVTTQNPSCDYTPATYISLLFTDLGILTPAAVSDELIKLY 325
            +  S+A T+MG++ +L+ A++ L  ++      R+SIS  AG +LF RY TR +  +  D NA     I RG RF   +LK+RE IA LG +FVQDG  IL+HG S VV  +L  AA N KNFTV++TEG P+ +G + +++L+  GIPVTVI+DSA  Y M+RVD+VL+GA+GVVESGGI+N IGT Q+A++A    +P YVAAES+KFARLYPL Q DL                                                  + G E  S           NP+ DYTP  Y++LLFTDLG+LTP+AVSDELI+LY
Sbjct:   34 IQRSQASTMMGLEIELKNASEMLKAWD------RSSISLSAGCDLFMRYVTRTSALEYEDINAGKSRLIERGERFGDISLKARETIALLGQDFVQDGCCILVHGSSRVVLALLKLAANNGKNFTVIVTEGGPKKTGMEVSKKLSAAGIPVTVIVDSAVAYTMDRVDMVLVGADGVVESGGIINVIGTFQVALIAHSMKRPFYVAAESFKFARLYPLDQQDLSI------------------------------------------------STGQEESS-----------NPARDYTPPHYLTLLFTDLGVLTPSAVSDELIQLY 293          
BLAST of NO10G00860 vs. NCBI_GenBank
Match: XP_002295052.1 (translation initiation factor eif-2b alpha subunit, partial [Thalassiosira pseudonana CCMP1335] >EED87832.1 translation initiation factor eif-2b alpha subunit, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 238.0 bits (606), Expect = 4.000e-59
Identity = 137/323 (42.41%), Postives = 188/323 (58.20%), Query Frame = 0
Query:    4 SRAVTIMGIQNDLQEAT-KKLIDYERQMSRGRASISFRAGVELFFRYATRNNDDVPDFNALNQLFITRGNRFVANALKSREVIAELGHNFVQDGMVILMHGRSEVVTGVLTRAA-QNNKNFTVMITEGRPEGSGFKAAERLTEVGIPVTVILDSAAGYFMERVDIVLLGAEGVVESGGIVNKIGTCQIAMVAKLYNKPLYVAAESYKFARLYPLTQADLEENIDNDLNRPLVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGGNVGFESGSVAGVAAMVTTQNPSCDYTPATYISLLFTDLGILTPAAVSDELIKLY 325
            S A T+MG+Q DL++A+          +  GR+ I+  +G ELF +Y TR + + P+F       + RG +F   +L +R+ IA +G  FV++G V+L HGRS VV  +L RAA    K F V++ EGRP+  G K+A+     GIP +V+LDSA GY MERVD+V++GAEGVVE+GG+VNK+G+  + ++AK    P YVAAESYKF RLYPL  ADL + +   + R L P                                            V  + + VT +NP CD+TPA YI+LLFTDLG+LTP+AVSDELI+LY
Sbjct:   14 SHAETMMGLQADLRDASDTPSSSSTTYLLAGRSHIALSSGCELFLKYVTRASLETPNFTECKSQVLERGTKFAEFSLAARDRIAGVGSPFVREGSVVLTHGRSRVVEALLLRAALVEKKRFRVIVLEGRPDAGGAKSAKTYANAGIPTSVVLDSAMGYIMERVDLVIVGAEGVVENGGVVNKVGSFALGVMAKELGVPFYVAAESYKFTRLYPLNNADLPDMV--PMLRRLEPY-------------------------------------------VVKLPSEVTIENPPCDFTPAKYITLLFTDLGVLTPSAVSDELIRLY 291          
BLAST of NO10G00860 vs. NCBI_GenBank
Match: PRW56233.1 (translation initiation factor eIF-2B subunit alpha-like [Chlorella sorokiniana])

HSP 1 Score: 237.3 bits (604), Expect = 6.800e-59
Identity = 139/326 (42.64%), Postives = 184/326 (56.44%), Query Frame = 0
Query:    1 MSNSRAVTIMGIQNDLQEATKKLIDYERQMSRGRASISFRAGVELFFRYATRNNDDVPD-FNALNQLFITRGNRFVANALKSREVIAELGHNFVQDGMVILMHGRSEVVTGVLTRAAQNNKNFTVMITEGRPEGSGFKAAERLTEVGIPVTVILDSAAGYFMERVDIVLLGAEGVVESGGIVNKIGTCQIAMVAKLYNKPLYVAAESYKFARLYPLTQADLE-ENIDNDLNRPLVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGGNVGFESGSVAGVAAMVTTQNPSCDYTPATYISLLFTDLGILTPAAVSDELIKLY 325
            + NS A T+MG++ +L++A   L            +IS +AG ELF RY TR +    D F A  +  I RG  F   + ++R  IAE G  F++ G  +L+HG S V   +L +AAQ  K F+V++TEGRP+ +G   A  L E+ +P TV+LDS  GY MERVD+VL+GAE VVE+GG++NK+GT Q+A+ AK ++ P+YVAAESYKFARLYPL Q D+  E    D   PL+P                                                 A V   NPS DYTP  +I+LLFTDLG+LTPAAVSDELI+LY
Sbjct:   64 IKNSTAQTMMGLEKELKDAAASL------QRCNPTAISLKAGCELFLRYTTRTSSLESDTFAAAKKRLIERGQHFAETSKRARAAIAETGERFIRKGSTVLVHGHSRVAIAILRKAAQAGKQFSVIVTEGRPDETGLTMARVLEEMRVPTTVVLDSGVGYVMERVDLVLVGAEAVVENGGVINKLGTYQVAIAAKEHSVPMYVAAESYKFARLYPLNQRDMPLERKQLDFG-PLLP-------------------------------------------------ASVAIDNPSRDYTPPQFITLLFTDLGVLTPAAVSDELIQLY 333          
The following BLAST results are available for this feature:
BLAST of NO10G00860 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_002997632.16.600e-6243.75translation initiation factor eIF-2B subunit alpha... [more]
ETL26437.18.600e-6243.75hypothetical protein L916_19893 [Phytophthora para... [more]
XP_008897890.11.900e-6143.45hypothetical protein PPTG_05904 [Phytophthora para... [more]
XP_024578466.11.900e-6142.94protein [Plasmopara halstedii] >CEG42097.1 protein... [more]
XP_009032787.11.200e-6044.03hypothetical protein AURANDRAFT_35783 [Aureococcus... [more]
GAQ87864.11.600e-6043.87eukaryotic translation initiation factor eIF-2B al... [more]
XP_002990361.16.200e-6044.31translation initiation factor eIF-2B subunit alpha... [more]
EFJ19798.16.200e-6044.31hypothetical protein SELMODRAFT_177636 [Selaginell... [more]
XP_002295052.14.000e-5942.41translation initiation factor eif-2b alpha subunit... [more]
PRW56233.16.800e-5942.64translation initiation factor eIF-2B subunit alpha... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL053nonsL053Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL052nonsL052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR004ncniR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR017ngnoR017Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR015ngnoR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR014ngnoR014Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO10G00860.1NO10G00860.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|586663gene_4134Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100135g14gene5193Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO10G00860.1NO10G00860.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO10G00860 ID=NO10G00860|Name=NO10G00860|organism=Nannochloropsis oceanica|type=gene|length=978bp
ATGAGCAATAGCCGTGCCGTCACCATCATGGGCATTCAGAACGACTTGCA
AGAAGCCACCAAGAAGTTGATAGACTACGAACGACAAATGAGTCGAGGCC
GGGCCTCCATCTCCTTTCGGGCGGGGGTCGAGCTGTTCTTCCGCTATGCC
ACGCGCAACAACGACGACGTCCCAGATTTTAATGCCCTTAATCAATTATT
CATCACGCGGGGGAATCGTTTTGTTGCGAATGCATTGAAAAGCCGCGAAG
TGATTGCTGAGCTTGGGCACAATTTCGTGCAAGATGGAATGGTGATCTTA
ATGCACGGCCGCTCTGAAGTGGTGACCGGCGTCCTGACCCGTGCCGCGCA
GAATAATAAAAATTTCACTGTGATGATCACGGAAGGTCGCCCGGAGGGTT
CTGGATTCAAGGCAGCGGAGCGATTGACTGAAGTTGGGATCCCCGTGACG
GTGATATTGGACTCGGCCGCTGGGTACTTTATGGAGAGGGTTGACATTGT
ATTGTTGGGCGCTGAGGGGGTGGTGGAGAGCGGGGGGATCGTGAATAAGA
TTGGGACATGCCAAATAGCCATGGTGGCCAAGTTGTACAATAAACCGTTG
TATGTCGCGGCGGAGAGCTATAAATTTGCCAGGCTTTATCCATTGACCCA
GGCGGATTTGGAGGAGAATATCGATAACGATTTAAACCGGCCGTTGGTTC
CCCCCATGCAGAGCGACAGTAGCGGCACTAGTAGCAGTAGTAGTAGCAGT
TGTAGCAGTAGCAACAGTAGTAGCGCCTTGCGTTCATCGGTAGTGGTAGG
AGATGGGGGTAATGTTGGGTTCGAGAGTGGGAGTGTGGCGGGGGTCGCGG
CAATGGTGACGACGCAGAATCCAAGCTGTGACTACACTCCGGCGACGTAC
ATCAGTCTGTTGTTTACGGATTTAGGTATCCTGACCCCTGCAGCCGTGTC
GGATGAACTGATCAAATTGTACCAATGA
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protein sequence of NO10G00860.1

>NO10G00860.1-protein ID=NO10G00860.1-protein|Name=NO10G00860.1|organism=Nannochloropsis oceanica|type=polypeptide|length=326bp
MSNSRAVTIMGIQNDLQEATKKLIDYERQMSRGRASISFRAGVELFFRYA
TRNNDDVPDFNALNQLFITRGNRFVANALKSREVIAELGHNFVQDGMVIL
MHGRSEVVTGVLTRAAQNNKNFTVMITEGRPEGSGFKAAERLTEVGIPVT
VILDSAAGYFMERVDIVLLGAEGVVESGGIVNKIGTCQIAMVAKLYNKPL
YVAAESYKFARLYPLTQADLEENIDNDLNRPLVPPMQSDSSGTSSSSSSS
CSSSNSSSALRSSVVVGDGGNVGFESGSVAGVAAMVTTQNPSCDYTPATY
ISLLFTDLGILTPAAVSDELIKLYQ*
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Synonyms
Publications