NO10G00860, NO10G00860 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO10G00860 vs. NCBI_GenBank
Match: XP_002997632.1 (translation initiation factor eIF-2B subunit alpha, putative [Phytophthora infestans T30-4] >EEY68074.1 translation initiation factor eIF-2B subunit alpha, putative [Phytophthora infestans T30-4]) HSP 1 Score: 247.3 bits (630), Expect = 6.600e-62 Identity = 147/336 (43.75%), Postives = 194/336 (57.74%), Query Frame = 0 Query: 1 MSNSRAVTIMGIQNDLQEATKKL-----IDYERQMSRGRASISFRAGVELFFRYATRNNDDVPDFNALNQLFITRGNRFVANALKSREVIAELGHNFVQDGMVILMHGRSEVVTGVLTRAAQNNKNFTVMITEGRPEGSGFKAAERLTEVGIPVTVILDSAAGYFMERVDIVLLGAEGVVESGGIVNKIGTCQIAMVAKLYNKPLYVAAESYKFARLYPLTQADLEENIDNDLNRPLVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGGNVGFESGSVAG------VAAMVTTQNPSCDYTPATYISLLFTDLGILTPAAVSDELIKLYQ 326 ++ S A T+M ++ +LQEA ++L D + +R SI+ AG +LF RY TR + DF+ I RG F +L SR+ I+++GHNF++DGM +L HG+S VV +L AA+ KNF+V +TEGR SG AE L + GIP TVILDSA Y+ME++DIV++GAEGVVE+GGIVN IGT IA++A+ NK YVAAESYKFARLYPLTQ D+ + + SG+VAG V+ +P DYTP YI+L+FTDLG+LTP+AVSDELIKLYQ Sbjct: 33 ITRSEASTMMQMEGELQEAAQQLRHFQAADDKASATRFHNSIATTAGCQLFLRYVTRCFLEFDDFDLCRSQLIDRGKLFAETSLSSRKRISDVGHNFIRDGMKVLTHGKSRVVIALLREAAK-TKNFSVFVTEGRSNASGVSTAEELAKAGIPTTVILDSAVAYYMEQMDIVIVGAEGVVENGGIVNSIGTYSIAVIAQALNKQFYVAAESYKFARLYPLTQRDVPQK-----------------------------------------------QMAAISGAVAGGEPTDETMKNVSFASPFFDYTPPGYIALMFTDLGVLTPSAVSDELIKLYQ 320
BLAST of NO10G00860 vs. NCBI_GenBank
Match: ETL26437.1 (hypothetical protein L916_19893 [Phytophthora parasitica] >ETP02462.1 hypothetical protein F441_20474 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 246.9 bits (629), Expect = 8.600e-62 Identity = 147/336 (43.75%), Postives = 193/336 (57.44%), Query Frame = 0 Query: 1 MSNSRAVTIMGIQNDLQEATKKL-----IDYERQMSRGRASISFRAGVELFFRYATRNNDDVPDFNALNQLFITRGNRFVANALKSREVIAELGHNFVQDGMVILMHGRSEVVTGVLTRAAQNNKNFTVMITEGRPEGSGFKAAERLTEVGIPVTVILDSAAGYFMERVDIVLLGAEGVVESGGIVNKIGTCQIAMVAKLYNKPLYVAAESYKFARLYPLTQADLEENIDNDLNRPLVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGGNVGFESGSVAG------VAAMVTTQNPSCDYTPATYISLLFTDLGILTPAAVSDELIKLYQ 326 ++ S A T+M ++ +LQEA ++L D + +R SI+ AG +LF RY TR + DF+ I RG F +L SR+ I+++GHNF++DGM +L HG+S VV +L AA+ KNF+V +TEGR SG AE L + GIP TVILDSA Y+ME+VDIV++GAEGVVE+GGIVN IGT IA++A+ NK YVAAESYKFARLYPLTQ D+ + + SG +AG V+ +P DYTP YI+L+FTDLG+LTP+AVSDELIKLYQ Sbjct: 33 ITRSEASTMMQMEGELQEAAQQLRVFQAADDKASATRFHNSIATTAGCQLFLRYVTRCFLEFDDFDLCRSQLIDRGKLFAETSLSSRKRISDVGHNFIRDGMKVLTHGKSRVVIALLREAAK-TKNFSVFVTEGRSNASGVSTAEELAKAGIPTTVILDSAVAYYMEQVDIVIVGAEGVVENGGIVNSIGTYSIAVIAQALNKQFYVAAESYKFARLYPLTQRDVPQK-----------------------------------------------QMAAISGDLAGGEPTDETMRNVSFASPFFDYTPPGYIALMFTDLGVLTPSAVSDELIKLYQ 320
BLAST of NO10G00860 vs. NCBI_GenBank
Match: XP_008897890.1 (hypothetical protein PPTG_05904 [Phytophthora parasitica INRA-310] >ETI32627.1 hypothetical protein F443_20602 [Phytophthora parasitica P1569] >ETK72998.1 hypothetical protein L915_20015 [Phytophthora parasitica] >ETL79656.1 hypothetical protein L917_19758 [Phytophthora parasitica] >ETM32897.1 hypothetical protein L914_19799 [Phytophthora parasitica] >ETN16780.1 hypothetical protein PPTG_05904 [Phytophthora parasitica INRA-310] >ETO61357.1 hypothetical protein F444_20615 [Phytophthora parasitica P1976] >ETP30630.1 hypothetical protein F442_20412 [Phytophthora parasitica P10297]) HSP 1 Score: 245.7 bits (626), Expect = 1.900e-61 Identity = 146/336 (43.45%), Postives = 193/336 (57.44%), Query Frame = 0 Query: 1 MSNSRAVTIMGIQNDLQEATKKL-----IDYERQMSRGRASISFRAGVELFFRYATRNNDDVPDFNALNQLFITRGNRFVANALKSREVIAELGHNFVQDGMVILMHGRSEVVTGVLTRAAQNNKNFTVMITEGRPEGSGFKAAERLTEVGIPVTVILDSAAGYFMERVDIVLLGAEGVVESGGIVNKIGTCQIAMVAKLYNKPLYVAAESYKFARLYPLTQADLEENIDNDLNRPLVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGGNVGFESGSVAG------VAAMVTTQNPSCDYTPATYISLLFTDLGILTPAAVSDELIKLYQ 326 ++ S A T+M ++ +LQEA ++L D + +R SI+ AG +LF RY TR + DF+ I RG F +L SR+ I+++GHNF++DGM +L HG+S VV +L AA+ KNF+V +TEGR SG AE L + GIP TVILDSA Y+ME++DIV++GAEGVVE+GGIVN IGT IA++A+ NK YVAAESYKFARLYPLTQ D+ + + SG +AG V+ +P DYTP YI+L+FTDLG+LTP+AVSDELIKLYQ Sbjct: 33 ITRSEASTMMQMEGELQEAAQQLRVFQAADDKASATRFHNSIATTAGCQLFLRYVTRCFLEFDDFDLCRSQLIDRGKLFAETSLSSRKRISDVGHNFIRDGMKVLTHGKSRVVIALLREAAK-TKNFSVFVTEGRSNASGVSTAEELAKAGIPTTVILDSAVAYYMEQMDIVIVGAEGVVENGGIVNSIGTYSIAVIAQALNKQFYVAAESYKFARLYPLTQRDVPQK-----------------------------------------------QMAAISGDLAGGEPTDETMRNVSFASPFFDYTPPGYIALMFTDLGVLTPSAVSDELIKLYQ 320
BLAST of NO10G00860 vs. NCBI_GenBank
Match: XP_024578466.1 (protein [Plasmopara halstedii] >CEG42097.1 protein [Plasmopara halstedii]) HSP 1 Score: 245.7 bits (626), Expect = 1.900e-61 Identity = 143/333 (42.94%), Postives = 196/333 (58.86%), Query Frame = 0 Query: 4 SRAVTIMGIQNDLQEATKKL-----IDYERQMSRGRASISFRAGVELFFRYATRNNDDVPDFNALNQLFITRGNRFVANALKSREVIAELGHNFVQDGMVILMHGRSEVVTGVLTRAAQNNKNFTVMITEGRPEGSGFKAAERLTEVGIPVTVILDSAAGYFMERVDIVLLGAEGVVESGGIVNKIGTCQIAMVAKLYNKPLYVAAESYKFARLYPLTQADLEENIDNDLNRPLVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGGNVGFESGSVAGVAAM------VTTQNPSCDYTPATYISLLFTDLGILTPAAVSDELIKLYQ 326 S A T+M ++++LQ A ++L D + + +R SI+ AG +LF RY TR + DF+ I RG F +L SR+ I+++GHNF++DGM +L HG+S VV +L AA+ KNF+V +TEGR GSG + AE L + GIP TVILDSA Y+ME++DIV++GAEGVVE+GGIVN +GT IA++A+ K YVAAESYKFARLYPLTQ D+ + +G + ++AG A+ ++ +P DYTP YI+L+FTDLG+LTP+AVSDELIKLYQ Sbjct: 37 SEASTMMQMESELQAAAQQLRAFQAADDDARATRFHNSIATTAGCQLFLRYVTRCFLEFDDFDLCRSQLIDRGKLFAETSLSSRKRISDVGHNFIRDGMKVLTHGKSRVVIALLREAAR-TKNFSVFVTEGRSNGSGVRTAEELAKAGIPTTVILDSAVAYYMEQIDIVIVGAEGVVENGGIVNSVGTYSIAVIAQALKKQFYVAAESYKFARLYPLTQRDVPQK-----------------------------------------------QMGAITSNMAGGEAIDEAVGHISFTSPFFDYTPPGYIALMFTDLGVLTPSAVSDELIKLYQ 321
BLAST of NO10G00860 vs. NCBI_GenBank
Match: XP_009032787.1 (hypothetical protein AURANDRAFT_35783 [Aureococcus anophagefferens] >EGB13196.1 hypothetical protein AURANDRAFT_35783 [Aureococcus anophagefferens]) HSP 1 Score: 243.0 bits (619), Expect = 1.200e-60 Identity = 140/318 (44.03%), Postives = 188/318 (59.12%), Query Frame = 0 Query: 11 GIQNDLQEATKKLIDY-ERQMS--RGRASISFRAGVELFFRYATRNNDDVPDFNALNQLFITRGNRFVANALKSREVIAELGHNFVQDGMVILMHGRSEVVTGVLTRAAQNNKNFTVMITEGRPEGSGFKAAERLTEVGIPVTVILDSAAGYFMERVDIVLLGAEGVVESGGIVNKIGTCQIAMVAKLYNKPLYVAAESYKFARLYPLTQADLEENIDNDLNRPLVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGGNVGFESGSVAGVAAMVTTQNPSCDYTPATYISLLFTDLGILTPAAVSDELIKLYQ 326 G+ +L+ A KL+ + E Q + RGR IS +G ELF R+ TR + DF+ ++ RG+ F + SR IAELGH FV+DG +L+HGRS V T +L +AA+ K+F+V +TEGR +G+G A L +G+P T+ILD+A Y+ME VD+VL+GAEGV+E+GG++NK+GT +A AK KP+YVAAESYKFARLYPL Q DL E+ + + PL A V ++P+CDYTP +I+LLFTDLGILTPAAVSDELI+LYQ Sbjct: 3 GLDEELRLARDKLLAFCETQPACLRGRTVISVSSGSELFLRHVTRTFLEFEDFDECKRMLGARGSSFARQSEASRARIAELGHAFVRDGAAVLVHGRSRVATALLAKAAE-TKHFSVFVTEGRLDGAGVDYASDLAALGVPTTMILDTAVAYYMENVDVVLVGAEGVMENGGVINKVGTLTVATCAKAMRKPVYVAAESYKFARLYPLNQRDLPESHAHTVALPL----------------------------------------------PESAHADVVAKSPACDYTPPQFITLLFTDLGILTPAAVSDELIRLYQ 273
BLAST of NO10G00860 vs. NCBI_GenBank
Match: GAQ87864.1 (eukaryotic translation initiation factor eIF-2B alpha subunit [Klebsormidium nitens]) HSP 1 Score: 242.7 bits (618), Expect = 1.600e-60 Identity = 143/326 (43.87%), Postives = 192/326 (58.90%), Query Frame = 0 Query: 1 MSNSRAVTIMGIQNDLQEATKKLIDYERQMSRGRASISFRAGVELFFRYATRNND-DVPDFNALNQLFITRGNRFVANALKSREVIAELGHNFVQDGMVILMHGRSEVVTGVLTRAAQNNKNFTVMITEGRPEGSGFKAAERLTEVGIPVTVILDSAAGYFMERVDIVLLGAEGVVESGGIVNKIGTCQIAMVAKLYNKPLYVAAESYKFARLYPLTQADLE-ENIDNDLNRPLVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGGNVGFESGSVAGVAAMVTTQNPSCDYTPATYISLLFTDLGILTPAAVSDELIKLY 325 + S+A T+MG++ +L+ A+++L R ++SIS AG ELF R+ TR + + D NA + I RG +F ++K+R+ I+++G +FV+DG IL HG S VV +L AA K+F+V+ EGRP+G G + A LT VGIPVT+ILD+ Y MERVD+VL GAEGVVESGGI+N +GT QIA+VA+ +NKP+YVAAESYKFARLYPL Q DL + PL P + NPS DYTP + ++LLFTDLG+LTP+AVSDELI+LY Sbjct: 81 IKRSKATTMMGLEIELKRASEEL------KEREKSSISLAAGCELFLRFVTRTSALEHEDINAGKERLIERGEQFSEISIKARQTISKVGADFVRDGCTILTHGVSRVVVSLLKLAASQGKHFSVICPEGRPDGKGIQTARELTAVGIPVTLILDTGVAYVMERVDMVLCGAEGVVESGGIINNLGTYQIAVVARAFNKPVYVAAESYKFARLYPLDQRDLPYDPKPVTFAEPLPPN--------------------------------------------------MKVDNPSRDYTPPSCLTLLFTDLGVLTPSAVSDELIQLY 350
BLAST of NO10G00860 vs. NCBI_GenBank
Match: XP_002990361.1 (translation initiation factor eIF-2B subunit alpha [Selaginella moellendorffii] >XP_002979390.2 translation initiation factor eIF-2B subunit alpha [Selaginella moellendorffii] >EFJ08630.1 hypothetical protein SELMODRAFT_131440 [Selaginella moellendorffii]) HSP 1 Score: 240.7 bits (613), Expect = 6.200e-60 Identity = 144/325 (44.31%), Postives = 191/325 (58.77%), Query Frame = 0 Query: 1 MSNSRAVTIMGIQNDLQEATKKLIDYERQMSRGRASISFRAGVELFFRYATRNND-DVPDFNALNQLFITRGNRFVANALKSREVIAELGHNFVQDGMVILMHGRSEVVTGVLTRAAQNNKNFTVMITEGRPEGSGFKAAERLTEVGIPVTVILDSAAGYFMERVDIVLLGAEGVVESGGIVNKIGTCQIAMVAKLYNKPLYVAAESYKFARLYPLTQADLEENIDNDLNRPLVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGGNVGFESGSVAGVAAMVTTQNPSCDYTPATYISLLFTDLGILTPAAVSDELIKLY 325 + S+A T+MG++ +L+ A++ L ++ R+SIS AG +LF RY TR + + D NA I RG RF +LK+RE IA LG +FVQDG IL+HG S VV +L AA N KNFTV++TEG P+ +G + +++L+ GIPVTVI+DSA Y M+RVD+VL+GA+GVVESGGI+N IGT Q+A++A +P YVAAES+KFARLYPL Q DL + G E S NP+ DYTP Y++LLFTDLG+LTP+AVSDELI+LY Sbjct: 36 IQRSQASTMMGLEIELKNASEMLKAWD------RSSISLSAGCDLFMRYVTRTSALEYEDINAGKSRLIERGERFGDISLKARETIALLGQDFVQDGCCILVHGSSRVVLALLKLAANNGKNFTVIVTEGGPKKTGMEVSKKLSAAGIPVTVIVDSAVAYTMDRVDMVLVGADGVVESGGIINVIGTFQVALIAHSMKRPFYVAAESFKFARLYPLDQQDLSI------------------------------------------------STGQEESS-----------NPARDYTPPHYLTLLFTDLGVLTPSAVSDELIQLY 295
BLAST of NO10G00860 vs. NCBI_GenBank
Match: EFJ19798.1 (hypothetical protein SELMODRAFT_177636 [Selaginella moellendorffii]) HSP 1 Score: 240.7 bits (613), Expect = 6.200e-60 Identity = 144/325 (44.31%), Postives = 191/325 (58.77%), Query Frame = 0 Query: 1 MSNSRAVTIMGIQNDLQEATKKLIDYERQMSRGRASISFRAGVELFFRYATRNND-DVPDFNALNQLFITRGNRFVANALKSREVIAELGHNFVQDGMVILMHGRSEVVTGVLTRAAQNNKNFTVMITEGRPEGSGFKAAERLTEVGIPVTVILDSAAGYFMERVDIVLLGAEGVVESGGIVNKIGTCQIAMVAKLYNKPLYVAAESYKFARLYPLTQADLEENIDNDLNRPLVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGGNVGFESGSVAGVAAMVTTQNPSCDYTPATYISLLFTDLGILTPAAVSDELIKLY 325 + S+A T+MG++ +L+ A++ L ++ R+SIS AG +LF RY TR + + D NA I RG RF +LK+RE IA LG +FVQDG IL+HG S VV +L AA N KNFTV++TEG P+ +G + +++L+ GIPVTVI+DSA Y M+RVD+VL+GA+GVVESGGI+N IGT Q+A++A +P YVAAES+KFARLYPL Q DL + G E S NP+ DYTP Y++LLFTDLG+LTP+AVSDELI+LY Sbjct: 34 IQRSQASTMMGLEIELKNASEMLKAWD------RSSISLSAGCDLFMRYVTRTSALEYEDINAGKSRLIERGERFGDISLKARETIALLGQDFVQDGCCILVHGSSRVVLALLKLAANNGKNFTVIVTEGGPKKTGMEVSKKLSAAGIPVTVIVDSAVAYTMDRVDMVLVGADGVVESGGIINVIGTFQVALIAHSMKRPFYVAAESFKFARLYPLDQQDLSI------------------------------------------------STGQEESS-----------NPARDYTPPHYLTLLFTDLGVLTPSAVSDELIQLY 293
BLAST of NO10G00860 vs. NCBI_GenBank
Match: XP_002295052.1 (translation initiation factor eif-2b alpha subunit, partial [Thalassiosira pseudonana CCMP1335] >EED87832.1 translation initiation factor eif-2b alpha subunit, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 238.0 bits (606), Expect = 4.000e-59 Identity = 137/323 (42.41%), Postives = 188/323 (58.20%), Query Frame = 0 Query: 4 SRAVTIMGIQNDLQEAT-KKLIDYERQMSRGRASISFRAGVELFFRYATRNNDDVPDFNALNQLFITRGNRFVANALKSREVIAELGHNFVQDGMVILMHGRSEVVTGVLTRAA-QNNKNFTVMITEGRPEGSGFKAAERLTEVGIPVTVILDSAAGYFMERVDIVLLGAEGVVESGGIVNKIGTCQIAMVAKLYNKPLYVAAESYKFARLYPLTQADLEENIDNDLNRPLVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGGNVGFESGSVAGVAAMVTTQNPSCDYTPATYISLLFTDLGILTPAAVSDELIKLY 325 S A T+MG+Q DL++A+ + GR+ I+ +G ELF +Y TR + + P+F + RG +F +L +R+ IA +G FV++G V+L HGRS VV +L RAA K F V++ EGRP+ G K+A+ GIP +V+LDSA GY MERVD+V++GAEGVVE+GG+VNK+G+ + ++AK P YVAAESYKF RLYPL ADL + + + R L P V + + VT +NP CD+TPA YI+LLFTDLG+LTP+AVSDELI+LY Sbjct: 14 SHAETMMGLQADLRDASDTPSSSSTTYLLAGRSHIALSSGCELFLKYVTRASLETPNFTECKSQVLERGTKFAEFSLAARDRIAGVGSPFVREGSVVLTHGRSRVVEALLLRAALVEKKRFRVIVLEGRPDAGGAKSAKTYANAGIPTSVVLDSAMGYIMERVDLVIVGAEGVVENGGVVNKVGSFALGVMAKELGVPFYVAAESYKFTRLYPLNNADLPDMV--PMLRRLEPY-------------------------------------------VVKLPSEVTIENPPCDFTPAKYITLLFTDLGVLTPSAVSDELIRLY 291
BLAST of NO10G00860 vs. NCBI_GenBank
Match: PRW56233.1 (translation initiation factor eIF-2B subunit alpha-like [Chlorella sorokiniana]) HSP 1 Score: 237.3 bits (604), Expect = 6.800e-59 Identity = 139/326 (42.64%), Postives = 184/326 (56.44%), Query Frame = 0 Query: 1 MSNSRAVTIMGIQNDLQEATKKLIDYERQMSRGRASISFRAGVELFFRYATRNNDDVPD-FNALNQLFITRGNRFVANALKSREVIAELGHNFVQDGMVILMHGRSEVVTGVLTRAAQNNKNFTVMITEGRPEGSGFKAAERLTEVGIPVTVILDSAAGYFMERVDIVLLGAEGVVESGGIVNKIGTCQIAMVAKLYNKPLYVAAESYKFARLYPLTQADLE-ENIDNDLNRPLVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGGNVGFESGSVAGVAAMVTTQNPSCDYTPATYISLLFTDLGILTPAAVSDELIKLY 325 + NS A T+MG++ +L++A L +IS +AG ELF RY TR + D F A + I RG F + ++R IAE G F++ G +L+HG S V +L +AAQ K F+V++TEGRP+ +G A L E+ +P TV+LDS GY MERVD+VL+GAE VVE+GG++NK+GT Q+A+ AK ++ P+YVAAESYKFARLYPL Q D+ E D PL+P A V NPS DYTP +I+LLFTDLG+LTPAAVSDELI+LY Sbjct: 64 IKNSTAQTMMGLEKELKDAAASL------QRCNPTAISLKAGCELFLRYTTRTSSLESDTFAAAKKRLIERGQHFAETSKRARAAIAETGERFIRKGSTVLVHGHSRVAIAILRKAAQAGKQFSVIVTEGRPDETGLTMARVLEEMRVPTTVVLDSGVGYVMERVDLVLVGAEAVVENGGVINKLGTYQVAIAAKEHSVPMYVAAESYKFARLYPLNQRDMPLERKQLDFG-PLLP-------------------------------------------------ASVAIDNPSRDYTPPQFITLLFTDLGVLTPAAVSDELIQLY 333 The following BLAST results are available for this feature:
BLAST of NO10G00860 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO10G00860 ID=NO10G00860|Name=NO10G00860|organism=Nannochloropsis oceanica|type=gene|length=978bpback to top protein sequence of NO10G00860.1 >NO10G00860.1-protein ID=NO10G00860.1-protein|Name=NO10G00860.1|organism=Nannochloropsis oceanica|type=polypeptide|length=326bpback to top Synonyms
Publications
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