NO10G00830, NO10G00830 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO10G00830 vs. NCBI_GenBank
Match: GAC72587.1 (chromatin remodeling complex SWI/SNF, component SWI2 [Moesziomyces antarcticus T-34]) HSP 1 Score: 338.2 bits (866), Expect = 8.800e-89 Identity = 224/609 (36.78%), Postives = 300/609 (49.26%), Query Frame = 0 Query: 185 VLEGRVLRNYQKMGLSWLLSLHKNQLNGILADEMGLGKTIQVIALLLHLHLQQGIRGPHLIVLPLSVLSGWEDELRRYAPSIRVYTHRGEKGVRKTAFHRVMQECFGRASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTYEILLQDDSTLRLSSLSSSLPPWHFLIIDEGHRLKNAKSKLLHILRKLNVKR-RLLLTGTPLQNDLKELFTLLRFVQPKLFGSKAASLEEWFDQPFDGSRGKGSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLSQLHGVLRPFLLRRTKRQVLASLPKKEERLIPCPLSAIQIRLYHLL---------QDASRASSSASPSLASIPFSSRLSTANLLIQLRKVCNHPFLLLDQHFKHTAKPYWQLSSFSPLPLSSSPHSSSSPSFLPSSGKLLVLSAILRRLSFLGHRPLIFSQFTSTLDVIEDFLIKHLPSLPYCRLDGSTPAGDRERIIDAFNRNASDVSCFLISTRAGGLGLNLQKGADTVIIFDSDWNPQNDLQAMARCHRIGQTQDVLVLRLVSVGPGGGGVMSVEEHIQKVAQSKLRREARVIGAGMF 784 +L G L+ YQ GL W++SL+ N+LNGILADEMGLGKTIQ I+L+ L + GP L+++PLS L+ W +E ++APS+ ++G VRK R+ F TTYE +++D L W +IIDEGHR+KN +SKL L + R RLLLTGTPLQN+L EL+ LL FV P++F S S +EWF+ PF + +G ++ +LH VLRPFLLRR K+ V + LP K E++I C +SA+Q++LY + +D S A A P N ++QLRK+CNHP++ F + L+ +P + P S+GK +L +L +L HR LIF Q T+ +D++EDFL Y RLDGST DR +++ FN S+ F++STRAGGLGLNLQ ADTVII+DSDWNP DLQA R HRIGQ +V +LRLV+ SVEE I AQ KL E +VI AG F Sbjct: 605 ILSGGTLKEYQMKGLQWMISLYNNRLNGILADEMGLGKTIQTISLITFLMEYKKQNGPFLVIVPLSTLTNWVNEFNKWAPSVSTLVYKGTPNVRKQLTGRLRSMNF-------------------------------------QVLLTTYEYIIKDKHLL-------GKIKWVHMIIDEGHRMKNTQSKLTITLTQFYTSRYRLLLTGTPLQNNLPELWALLNFVLPRIFNS-VKSFDEWFNTPFTNTGNEGG-------------------------------------------MMLNEEEALLIIKRLHKVLRPFLLRRLKKDVASELPDKVEKVIKCKMSALQLKLYQQMKKHKMILSGEDNSTAGKKAKP-------QGIRGLQNAIMQLRKICNHPYV------------------FEQVELAINPTKENGPDLYRSAGKFELLDRLLPKLFATKHRVLIFFQMTAIMDIMEDFL--RYRGFKYLRLDGSTKPDDRSQLLKMFNAPGSEYFVFILSTRAGGLGLNLQ-SADTVIIYDSDWNPHQDLQAQDRAHRIGQKMEVRILRLVT-------EKSVEETILARAQDKLEIEGKVIQAGKF 1090
BLAST of NO10G00830 vs. NCBI_GenBank
Match: ETS60968.1 (hypothetical protein PaG_04898 [Moesziomyces aphidis DSM 70725]) HSP 1 Score: 338.2 bits (866), Expect = 8.800e-89 Identity = 224/609 (36.78%), Postives = 300/609 (49.26%), Query Frame = 0 Query: 185 VLEGRVLRNYQKMGLSWLLSLHKNQLNGILADEMGLGKTIQVIALLLHLHLQQGIRGPHLIVLPLSVLSGWEDELRRYAPSIRVYTHRGEKGVRKTAFHRVMQECFGRASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTYEILLQDDSTLRLSSLSSSLPPWHFLIIDEGHRLKNAKSKLLHILRKLNVKR-RLLLTGTPLQNDLKELFTLLRFVQPKLFGSKAASLEEWFDQPFDGSRGKGSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLSQLHGVLRPFLLRRTKRQVLASLPKKEERLIPCPLSAIQIRLYHLL---------QDASRASSSASPSLASIPFSSRLSTANLLIQLRKVCNHPFLLLDQHFKHTAKPYWQLSSFSPLPLSSSPHSSSSPSFLPSSGKLLVLSAILRRLSFLGHRPLIFSQFTSTLDVIEDFLIKHLPSLPYCRLDGSTPAGDRERIIDAFNRNASDVSCFLISTRAGGLGLNLQKGADTVIIFDSDWNPQNDLQAMARCHRIGQTQDVLVLRLVSVGPGGGGVMSVEEHIQKVAQSKLRREARVIGAGMF 784 +L G L+ YQ GL W++SL+ N+LNGILADEMGLGKTIQ I+L+ L + GP L+++PLS L+ W +E ++APS+ ++G VRK R+ F TTYE +++D L W +IIDEGHR+KN +SKL L + R RLLLTGTPLQN+L EL+ LL FV P++F S S +EWF+ PF + +G ++ +LH VLRPFLLRR K+ V + LP K E++I C +SA+Q++LY + +D S A A P N ++QLRK+CNHP++ F + L+ +P + P S+GK +L +L +L HR LIF Q T+ +D++EDFL Y RLDGST DR +++ FN S+ F++STRAGGLGLNLQ ADTVII+DSDWNP DLQA R HRIGQ +V +LRLV+ SVEE I AQ KL E +VI AG F Sbjct: 590 ILSGGTLKEYQMKGLQWMISLYNNRLNGILADEMGLGKTIQTISLITFLMEYKKQNGPFLVIVPLSTLTNWVNEFNKWAPSVSTLVYKGTPNVRKQLTGRLRSMNF-------------------------------------QVLLTTYEYIIKDKHLL-------GKIKWVHMIIDEGHRMKNTQSKLTITLTQFYTSRYRLLLTGTPLQNNLPELWALLNFVLPRIFNS-VKSFDEWFNTPFTNTGNEGG-------------------------------------------MMLNEEEALLIIKRLHKVLRPFLLRRLKKDVASELPDKVEKVIKCKMSALQLKLYQQMKKHKMILSGEDNSTAGKKAKP-------QGIRGLQNAIMQLRKICNHPYV------------------FEQVELAINPTKENGPDLYRSAGKFELLDRLLPKLFATKHRVLIFFQMTAIMDIMEDFL--RYRGFKYLRLDGSTKPDDRSQLLKMFNAPGSEYFVFILSTRAGGLGLNLQ-SADTVIIYDSDWNPHQDLQAQDRAHRIGQKMEVRILRLVT-------EKSVEETILARAQDKLEIEGKVIQAGKF 1075
BLAST of NO10G00830 vs. NCBI_GenBank
Match: XP_014658949.1 (RSC complex subunit [Moesziomyces antarcticus] >GAK63094.1 RSC complex subunit [Moesziomyces antarcticus]) HSP 1 Score: 338.2 bits (866), Expect = 8.800e-89 Identity = 224/609 (36.78%), Postives = 300/609 (49.26%), Query Frame = 0 Query: 185 VLEGRVLRNYQKMGLSWLLSLHKNQLNGILADEMGLGKTIQVIALLLHLHLQQGIRGPHLIVLPLSVLSGWEDELRRYAPSIRVYTHRGEKGVRKTAFHRVMQECFGRASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTYEILLQDDSTLRLSSLSSSLPPWHFLIIDEGHRLKNAKSKLLHILRKLNVKR-RLLLTGTPLQNDLKELFTLLRFVQPKLFGSKAASLEEWFDQPFDGSRGKGSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLSQLHGVLRPFLLRRTKRQVLASLPKKEERLIPCPLSAIQIRLYHLL---------QDASRASSSASPSLASIPFSSRLSTANLLIQLRKVCNHPFLLLDQHFKHTAKPYWQLSSFSPLPLSSSPHSSSSPSFLPSSGKLLVLSAILRRLSFLGHRPLIFSQFTSTLDVIEDFLIKHLPSLPYCRLDGSTPAGDRERIIDAFNRNASDVSCFLISTRAGGLGLNLQKGADTVIIFDSDWNPQNDLQAMARCHRIGQTQDVLVLRLVSVGPGGGGVMSVEEHIQKVAQSKLRREARVIGAGMF 784 +L G L+ YQ GL W++SL+ N+LNGILADEMGLGKTIQ I+L+ L + GP L+++PLS L+ W +E ++APS+ ++G VRK R+ F TTYE +++D L W +IIDEGHR+KN +SKL L + R RLLLTGTPLQN+L EL+ LL FV P++F S S +EWF+ PF + +G ++ +LH VLRPFLLRR K+ V + LP K E++I C +SA+Q++LY + +D S A A P N ++QLRK+CNHP++ F + L+ +P + P S+GK +L +L +L HR LIF Q T+ +D++EDFL Y RLDGST DR +++ FN S+ F++STRAGGLGLNLQ ADTVII+DSDWNP DLQA R HRIGQ +V +LRLV+ SVEE I AQ KL E +VI AG F Sbjct: 606 ILSGGTLKEYQMKGLQWMISLYNNRLNGILADEMGLGKTIQTISLITFLMEYKKQNGPFLVIVPLSTLTNWVNEFNKWAPSVSTLVYKGTPNVRKQLTGRLRSMNF-------------------------------------QVLLTTYEYIIKDKHLL-------GKIKWVHMIIDEGHRMKNTQSKLTITLTQFYTSRYRLLLTGTPLQNNLPELWALLNFVLPRIFNS-VKSFDEWFNTPFTNTGNEGG-------------------------------------------MMLNEEEALLIIKRLHKVLRPFLLRRLKKDVASELPDKVEKVIKCKMSALQLKLYQQMKKHKMILSGEDNSTAGKKAKP-------QGIRGLQNAIMQLRKICNHPYV------------------FEQVELAINPTKENGPDLYRSAGKFELLDRLLPKLFATKHRVLIFFQMTAIMDIMEDFL--RYRGFKYLRLDGSTKPDDRSQLLKMFNAPGSEYFVFILSTRAGGLGLNLQ-SADTVIIYDSDWNPHQDLQAQDRAHRIGQKMEVRILRLVT-------EKSVEETILARAQDKLEIEGKVIQAGKF 1091
BLAST of NO10G00830 vs. NCBI_GenBank
Match: CDI52121.1 (probable SNF2-component of SWI/SNF global transcription activator complex [Melanopsichium pennsylvanicum 4]) HSP 1 Score: 337.8 bits (865), Expect = 1.100e-88 Identity = 223/609 (36.62%), Postives = 302/609 (49.59%), Query Frame = 0 Query: 185 VLEGRVLRNYQKMGLSWLLSLHKNQLNGILADEMGLGKTIQVIALLLHLHLQQGIRGPHLIVLPLSVLSGWEDELRRYAPSIRVYTHRGEKGVRKTAFHRVMQECFGRASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTYEILLQDDSTLRLSSLSSSLPPWHFLIIDEGHRLKNAKSKLLHILRKLNVKR-RLLLTGTPLQNDLKELFTLLRFVQPKLFGSKAASLEEWFDQPFDGSRGKGSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLSQLHGVLRPFLLRRTKRQVLASLPKKEERLIPCPLSAIQIRLYHLL---------QDASRASSSASPSLASIPFSSRLSTANLLIQLRKVCNHPFLLLDQHFKHTAKPYWQLSSFSPLPLSSSPHSSSSPSFLPSSGKLLVLSAILRRLSFLGHRPLIFSQFTSTLDVIEDFLIKHLPSLPYCRLDGSTPAGDRERIIDAFNRNASDVSCFLISTRAGGLGLNLQKGADTVIIFDSDWNPQNDLQAMARCHRIGQTQDVLVLRLVSVGPGGGGVMSVEEHIQKVAQSKLRREARVIGAGMF 784 +L G L+ YQ GL W++SL+ N+LNGILADEMGLGKTIQ I+L+ +L + GP L+++PLS L+ W +E ++AP++ ++G VRK R+ F TTYE +++D L W +IIDEGHR+KN +SKL L + R RLLLTGTPLQN+L EL+ LL FV P++F S S +EWF+ PF + +G ++ +LH VLRPFLLRR K+ V + LP K E++I C +SA+Q++LY + +D ++A A P N ++QLRK+CNHP++ F + L+ +P + P S+GK +L +L +L HR LIF Q T+ +D++EDFL Y RLDGST DR +++ FN SD F++STRAGGLGLNLQ ADTVII+DSDWNP DLQA R HRIGQ +V +LRLV+ SVEE I AQ KL E +VI AG F Sbjct: 607 ILSGGTLKEYQIKGLQWMISLYNNRLNGILADEMGLGKTIQTISLITYLMEFKKQNGPFLVIVPLSTLTNWVNEFNKWAPTVSTLVYKGTPNVRKQLTGRLRSMNF-------------------------------------QVLLTTYEYIIKDKHLL-------GKIKWVHMIIDEGHRMKNTQSKLTITLTQFYTSRYRLLLTGTPLQNNLPELWALLNFVLPRIFNS-VKSFDEWFNTPFTNTGNEGG-------------------------------------------MMLNEEEALLIIKRLHKVLRPFLLRRLKKDVASELPDKVEKVIKCKMSALQLKLYQQMKKHKMILSGEDNTQAGKKAKP-------QGIRGLQNAIMQLRKICNHPYV------------------FEQVELAINPTKENGPDLYRSAGKFELLDRLLPKLFATKHRVLIFFQMTAIMDIMEDFL--RYRGFKYLRLDGSTKPDDRSQLLKLFNTPGSDYFIFILSTRAGGLGLNLQ-SADTVIIYDSDWNPHQDLQAQDRAHRIGQKMEVRILRLVT-------EKSVEETILARAQDKLEIEGKVIQAGKF 1092
BLAST of NO10G00830 vs. NCBI_GenBank
Match: KIV85700.1 (hypothetical protein PV11_01361 [Exophiala sideris]) HSP 1 Score: 337.8 bits (865), Expect = 1.100e-88 Identity = 220/600 (36.67%), Postives = 304/600 (50.67%), Query Frame = 0 Query: 185 VLEGRVLRNYQKMGLSWLLSLHKNQLNGILADEMGLGKTIQVIALLLHLHLQQGIRGPHLIVLPLSVLSGWEDELRRYAPSIRVYTHRGEKGVRKTAFHRVMQECFGRASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTYEILLQDDSTLRLSSLSSSLPPWHFLIIDEGHRLKNAKSKLLHILRKLNVKR-RLLLTGTPLQNDLKELFTLLRFVQPKLFGSKAASLEEWFDQPFDGSRGKGSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLSQLHGVLRPFLLRRTKRQVLASLPKKEERLIPCPLSAIQIRLYHLLQDASRASSSASPSLASIPFSSRLSTANLLIQLRKVCNHPFLLLDQHFKHTAKPYWQLSSFSPLPLSSSPHSSSSPSFLPSSGKLLVLSAILRRLSFLGHRPLIFSQFTSTLDVIEDFLIKHLPSLPYCRLDGSTPAGDRERIIDAFNRNASDVSCFLISTRAGGLGLNLQKGADTVIIFDSDWNPQNDLQAMARCHRIGQTQDVLVLRLVSVGPGGGGVMSVEEHIQKVAQSKLRREARVIGAGMF 784 +L G L+ YQ GL W++SL N LNGILADEMGLGKTIQ I+L+ +L ++ +GP L+++PLS L+ W E ++APS++ ++G RK A + + F TTYE +++D L S W +I+DEGHR+KNA SKL + + + R RL+LTGTPLQN+L EL+ LL FV P +F S S +EWF+ PF + G+ V+ +LH VLRPFLLRR K+ V LP K+ER++ C SA+Q +LY L ++ + + +S +N+L+QLRK+CNHP++ F P+ +P ++ S ++GK +L +L + GHR L+F Q T ++++EDFL L + Y RLDG+T A DR ++ FN S CFL+STRAGGLGLNLQ ADTVII+DSDWNP DLQA R HRIGQ +V +LRL+S SVEE I + AQ KL + +VI AG F Sbjct: 558 ILVGGTLKEYQLKGLQWMISLFNNNLNGILADEMGLGKTIQTISLITYLMEKKNQKGPFLVIVPLSTLTNWNLEFDKWAPSVKKIVYKGPPNTRKAAQYDIRNGNF-------------------------------------QVLLTTYEYVIKDRPVL-------SKIKWVHMIVDEGHRMKNANSKLSYTITQYYTTRYRLILTGTPLQNNLPELWALLNFVLPTIFKS-VKSFDEWFNTPFANTGGQDK-------------------------------------------MELSEEEQLLVIRRLHKVLRPFLLRRLKKDVEKDLPDKQERVVKCRFSALQTKLYMQLMTHNKLAVTDGKG----GKTSMRGLSNMLMQLRKLCNHPYV------------------FEPVEEQMNPGKGTNDSIWRTAGKFELLDRVLPKFLVTGHRVLMFFQMTQIMNIMEDFL--RLRGIQYLRLDGATKAEDRSELLRLFNEPGSPYFCFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQDLQAQDRAHRIGQKNEVRILRLISSN-------SVEEKILERAQFKLDMDGKVIQAGKF 1037
BLAST of NO10G00830 vs. NCBI_GenBank
Match: CDH58619.1 (rsc complex subunit [Lichtheimia corymbifera JMRC:FSU:9682]) HSP 1 Score: 337.4 bits (864), Expect = 1.500e-88 Identity = 224/600 (37.33%), Postives = 309/600 (51.50%), Query Frame = 0 Query: 186 LEGRVLRNYQKMGLSWLLSLHKNQLNGILADEMGLGKTIQVIALLLHLHLQQGIRGPHLIVLPLSVLSGWEDELRRYAPSIRVYTHRGEKGVRKTAFHRVMQECFGRASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTYEILLQDDSTLRLSSLSSSLPPWHFLIIDEGHRLKNAKSKLLHILRK-LNVKRRLLLTGTPLQNDLKELFTLLRFVQPKLFGSKAASLEEWFDQPFDGSRGKGSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLSQLHGVLRPFLLRRTKRQVLASLPKKEERLIPCPLSAIQIRL-YHLLQDASRASSSASPSLASIPFSSRLSTANLLIQLRKVCNHPFLLLDQHFKHTAKPYWQLSSFSPLPLSSSPHSSSSPSFLPSSGKLLVLSAILRRLSFLGHRPLIFSQFTSTLDVIEDFLIKHLPSLPYCRLDGSTPAGDRERIIDAFNRNASDVSCFLISTRAGGLGLNLQKGADTVIIFDSDWNPQNDLQAMARCHRIGQTQDVLVLRLVSVGPGGGGVMSVEEHIQKVAQSKLRREARVIGAGMF 784 L G L+ YQ GL W++SL+ N+LNGILADEMGLGKTIQ IAL+ HL + + GP+LI+LP+S ++ W E ++APS++ ++G RK + + + F T+YE ++ L LS + W ++I+DEGHR+KN SKL LR+ + + RL+L+GTPLQN+L EL++LL F+ P +F S S EEWF PF+ +G N V+ +LH VLRPF+LRR K+ V LP K ER++ C +SA+QI+L H+ + R + S+S + F N L QLRK+CNHPF+ F + +P S+ SGK+ +L IL++L H+ LIF Q T +++IED++ H PY RLDG+T + DR R++ AFN S FL+STRAGGLG+NLQ ADTVI+FDSDWNPQ DLQA R HRIGQT++VL+LRLV+ S+EE I A KL + +VI AG F Sbjct: 890 LVGGELKKYQLKGLQWMVSLYNNRLNGILADEMGLGKTIQTIALITHLMESKRVNGPYLIILPVSTMTNWAMEFEKWAPSVKTIIYKGPPDERKKLQNDIRRGDF-------------------------------------HVLLTSYEYIINSKDRLLLSKVQ-----WLYMIVDEGHRMKNTNSKLTTTLRRHYHSQYRLILSGTPLQNNLAELWSLLNFILPSVFKS-VQSFEEWFSAPFN---VQGVN----------------------------------------VKIDLNEEEKLLVIKRLHKVLRPFVLRRLKQDVELELPSKVERVVKCRMSALQIKLTQHIQKSGLRLAISSSDPASKGKFK---HWNNALQQLRKICNHPFV------------------FREVENVINPSHESNELLYRVSGKVELLDRILQKLQATNHKVLIFFQMTHIMNIIEDYM--HYRGFPYLRLDGNTKSDDRARLLQAFNAPDSTHFAFLLSTRAGGLGINLQ-AADTVILFDSDWNPQQDLQAQDRAHRIGQTREVLILRLVTAN-------SIEEEIVARANHKLDIDGKVIQAGKF 1372
BLAST of NO10G00830 vs. NCBI_GenBank
Match: KII74173.1 (putative global transcription activator SNF2L2 [Thelohanellus kitauei]) HSP 1 Score: 337.4 bits (864), Expect = 1.500e-88 Identity = 226/607 (37.23%), Postives = 302/607 (49.75%), Query Frame = 0 Query: 185 VLEGRVLRNYQKMGLSWLLSLHKNQLNGILADEMGLGKTIQVIALLLHLHLQQGIRGPHLIVLPLSVLSGWEDELRRYAPSIRVYTHRGEKGVRKTAFHRVMQECFGRASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTYEILLQDDSTLRLSSLSSSLPPWHFLIIDEGHRLKNAKSKLLHIL-RKLNVKRRLLLTGTPLQNDLKELFTLLRFVQPKLFGSKAASLEEWFDQPFDGSRGKGSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLSQLHGVLRPFLLRRTKRQVLASLPKKEERLIPCPLSAIQIRLYHLLQDASRA-SSSASPSLASIPFSSRLSTANLLIQLRKVCNHPFLL------LDQHFKHTAKPYWQLSSFSPLPLSSSPHSSSSPSFLPSSGKLLVLSAILRRLSFLGHRPLIFSQFTSTLDVIEDFLIKHLPSLPYCRLDGSTPAGDRERIIDAFNRNASDVSCFLISTRAGGLGLNLQKGADTVIIFDSDWNPQNDLQAMARCHRIGQTQDVLVLRLVSVGPGGGGVMSVEEHIQKVAQSKLRREARVIGAGMF 784 +LEG L+ YQ GL W++SL N+LNGILADEMGLGKTIQ IA +L + I GPH++V+PLS +S W+ E +++ P + V T++G + R+ RV F TTYE +++D + L S PW ++++DEGHR+KN KL IL V RLLLTGTPLQN L EL+ LL F+ P +F + E+WF+ PF + + ++ +LH +LRPFLLRR K++V A LP+K E +I C +S++Q +YHL Q+ A S S S P N L+QLRKVCNHPFL + +H+ H P SP SGK ++ IL +L HR LIF Q T + ++ED+L + Y RLDGST + DR +++D FN S F++STRAGGLGLNLQ ADTVI+FDSDWNPQ DLQA R HRIGQ +V VLRL++ S+EE I A+ KL + +VI AGMF Sbjct: 416 ILEGGQLKEYQIKGLEWMVSLFNNKLNGILADEMGLGKTIQTIAFFAYLMEFKRIAGPHIVVVPLSTISNWQMEFQKWCPKMDVLTYKGPQTYRRQMAPRVKTVKFN-------------------------------------ILLTTYEFVMKDKALL-------SKVPWKYMVVDEGHRMKNQDCKLTLILTSNYKVPYRLLLTGTPLQNRLPELWALLNFLLPNIFNC-CTTFEQWFNAPFANTGER---------------------------------------------VELNEEETYLIIRRLHKILRPFLLRRLKKEVEAQLPEKVEYVIKCHMSSLQKIIYHLTQNNIPALSQSQEGSKGRQP----RILLNTLMQLRKVCNHPFLFPQIEESMVKHWSHEVDPL------------------HSPLIYRVSGKFELMDRILPKLKSKNHRCLIFCQMTQLMSILEDYL--NFSKYMYLRLDGSTKSEDRAKLLDLFNAENSPYFIFILSTRAGGLGLNLQ-SADTVILFDSDWNPQQDLQAQDRAHRIGQKNEVRVLRLITAN-------SIEERILAAARFKLNMDEKVIQAGMF 900
BLAST of NO10G00830 vs. NCBI_GenBank
Match: XP_011387409.1 (putative SWI/SNF catalytic subunit [Ustilago maydis 521] >KIS71283.1 putative SWI/SNF catalytic subunit [Ustilago maydis 521]) HSP 1 Score: 337.4 bits (864), Expect = 1.500e-88 Identity = 224/609 (36.78%), Postives = 300/609 (49.26%), Query Frame = 0 Query: 185 VLEGRVLRNYQKMGLSWLLSLHKNQLNGILADEMGLGKTIQVIALLLHLHLQQGIRGPHLIVLPLSVLSGWEDELRRYAPSIRVYTHRGEKGVRKTAFHRVMQECFGRASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTYEILLQDDSTLRLSSLSSSLPPWHFLIIDEGHRLKNAKSKLLHILRKLNVKR-RLLLTGTPLQNDLKELFTLLRFVQPKLFGSKAASLEEWFDQPFDGSRGKGSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLSQLHGVLRPFLLRRTKRQVLASLPKKEERLIPCPLSAIQIRLYHLL---------QDASRASSSASPSLASIPFSSRLSTANLLIQLRKVCNHPFLLLDQHFKHTAKPYWQLSSFSPLPLSSSPHSSSSPSFLPSSGKLLVLSAILRRLSFLGHRPLIFSQFTSTLDVIEDFLIKHLPSLPYCRLDGSTPAGDRERIIDAFNRNASDVSCFLISTRAGGLGLNLQKGADTVIIFDSDWNPQNDLQAMARCHRIGQTQDVLVLRLVSVGPGGGGVMSVEEHIQKVAQSKLRREARVIGAGMF 784 +L G L+ YQ GL W++SL+ N+LNGILADEMGLGKTIQ I+L+ +L + GP L+++PLS L+ W +E ++APS+ ++G VRK R+ F TTYE +++D L W +IIDEGHR+KN +SKL L + R RLLLTGTPLQN+L EL+ LL FV P++F S S +EWF+ PF + +G ++ +LH VLRPFLLRR K+ V + LP K E++I C +SA+Q++LY + +D S A A P N ++QLRK+CNHP++ F + L+ +P + P +GK +L +L +L HR LIF Q T+ +D++EDFL Y RLDGST DR +++ FN SD F++STRAGGLGLNLQ ADTVII+DSDWNP DLQA R HRIGQ +V +LRLV+ SVEE I AQ KL E +VI AG F Sbjct: 596 ILSGGTLKEYQMKGLQWMISLYNNRLNGILADEMGLGKTIQTISLITYLMEFKKQNGPFLVIVPLSTLTNWVNEFNKWAPSVSTLIYKGTPNVRKQLTGRLRSMNF-------------------------------------QVLLTTYEYIIKDKHLL-------GKIKWVHMIIDEGHRMKNTQSKLTITLTQFYTSRYRLLLTGTPLQNNLPELWALLNFVLPRIFNS-VKSFDEWFNTPFTNTGSEGG-------------------------------------------MMLNEEEALLIIKRLHKVLRPFLLRRLKKDVASELPDKVEKVIKCKMSALQLKLYQQMKKHKMILSGEDNSTAGKKAKP-------QGIRGLQNAIMQLRKICNHPYV------------------FEQVELAINPTKENGPDLYRVAGKFELLDRLLPKLFATKHRVLIFFQMTAIMDIMEDFL--RYRGFKYLRLDGSTKPDDRSQLLKLFNAPGSDYFVFILSTRAGGLGLNLQ-SADTVIIYDSDWNPHQDLQAQDRAHRIGQKMEVRILRLVT-------EKSVEETILARAQDKLEIEGKVIQAGKF 1081
BLAST of NO10G00830 vs. NCBI_GenBank
Match: CBQ70591.1 (probable SNF2-component of SWI/SNF global transcription activator complex [Sporisorium reilianum SRZ2]) HSP 1 Score: 337.0 bits (863), Expect = 2.000e-88 Identity = 223/609 (36.62%), Postives = 300/609 (49.26%), Query Frame = 0 Query: 185 VLEGRVLRNYQKMGLSWLLSLHKNQLNGILADEMGLGKTIQVIALLLHLHLQQGIRGPHLIVLPLSVLSGWEDELRRYAPSIRVYTHRGEKGVRKTAFHRVMQECFGRASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTYEILLQDDSTLRLSSLSSSLPPWHFLIIDEGHRLKNAKSKLLHILRKLNVKR-RLLLTGTPLQNDLKELFTLLRFVQPKLFGSKAASLEEWFDQPFDGSRGKGSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLSQLHGVLRPFLLRRTKRQVLASLPKKEERLIPCPLSAIQIRLYHLL---------QDASRASSSASPSLASIPFSSRLSTANLLIQLRKVCNHPFLLLDQHFKHTAKPYWQLSSFSPLPLSSSPHSSSSPSFLPSSGKLLVLSAILRRLSFLGHRPLIFSQFTSTLDVIEDFLIKHLPSLPYCRLDGSTPAGDRERIIDAFNRNASDVSCFLISTRAGGLGLNLQKGADTVIIFDSDWNPQNDLQAMARCHRIGQTQDVLVLRLVSVGPGGGGVMSVEEHIQKVAQSKLRREARVIGAGMF 784 +L G L+ YQ GL W++SL+ N+LNGILADEMGLGKTIQ I+L+ +L + GP L+++PLS L+ W +E ++APS+ ++G VRK R+ F TTYE +++D L W +IIDEGHR+KN +SKL L + R RLLLTGTPLQN+L EL+ LL FV P++F S S +EWF+ PF + +G ++ +LH VLRPFLLRR K+ V + LP K E++I C +SA+Q++LY + +D S A A P N ++QLRK+CNHP++ F + L+ +P + P +GK +L +L +L HR LIF Q T+ +D++EDFL Y RLDG+T DR +++ FN SD F++STRAGGLGLNLQ ADTVII+DSDWNP DLQA R HRIGQ +V +LRLV+ SVEE I AQ KL E +VI AG F Sbjct: 607 ILSGGTLKEYQMKGLQWMISLYNNRLNGILADEMGLGKTIQTISLITYLMEFKKQNGPFLVIVPLSTLTNWVNEFNKWAPSVSTLVYKGTPNVRKQLTGRLRSMNF-------------------------------------QVLLTTYEYIIKDKHLL-------GKIKWVHMIIDEGHRMKNTQSKLTITLTQFYTSRYRLLLTGTPLQNNLPELWALLNFVLPRIFNS-VKSFDEWFNTPFTNTGNEGG-------------------------------------------MMLNEEEALLIIKRLHKVLRPFLLRRLKKDVASELPDKVEKVIKCKMSALQLKLYQQMKKHKMILSGEDNSTAGKKAKP-------QGIRGLQNAIMQLRKICNHPYV------------------FEQVELAINPTKENGPDLFRVAGKFELLDRLLPKLFATKHRVLIFFQMTAIMDIMEDFL--RYRGFKYLRLDGATKPDDRSQLLKLFNAPGSDYFVFILSTRAGGLGLNLQ-SADTVIIYDSDWNPHQDLQAQDRAHRIGQKMEVRILRLVT-------EKSVEETILARAQDKLEIEGKVIQAGKF 1092
BLAST of NO10G00830 vs. NCBI_GenBank
Match: SCU84670.1 (LAMI_0C08416g1_1 [Lachancea mirantina]) HSP 1 Score: 337.0 bits (863), Expect = 2.000e-88 Identity = 223/600 (37.17%), Postives = 306/600 (51.00%), Query Frame = 0 Query: 185 VLEGRVLRNYQKMGLSWLLSLHKNQLNGILADEMGLGKTIQVIALLLHLHLQQGIRGPHLIVLPLSVLSGWEDELRRYAPSIRVYTHRGEKGVRKTAFHRVMQECFGRASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTYEILLQDDSTLRLSSLSSSLPPWHFLIIDEGHRLKNAKSKLLHILRKL-NVKRRLLLTGTPLQNDLKELFTLLRFVQPKLFGSKAASLEEWFDQPFDGSRGKGSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLSQLHGVLRPFLLRRTKRQVLASLPKKEERLIPCPLSAIQIRLYHLLQDASRASSSASPSLASIPFSSRLSTANLLIQLRKVCNHPFLLLDQHFKHTAKPYWQLSSFSPLPLSSSPHSSSSPSFLPSSGKLLVLSAILRRLSFLGHRPLIFSQFTSTLDVIEDFLIKHLPSLPYCRLDGSTPAGDRERIIDAFNRNASDVSCFLISTRAGGLGLNLQKGADTVIIFDSDWNPQNDLQAMARCHRIGQTQDVLVLRLVSVGPGGGGVMSVEEHIQKVAQSKLRREARVIGAGMF 784 +L G L+ YQ GL W++SL+ N LNGILADEMGLGKTIQ I+L+ +LH + GP L+++PLS ++ W E ++APS+ ++G RK+ ++V F TTYE +++D S+L + W +IIDEGHR+KNA+SKL L K + RL+LTGTPLQN+L EL+ LL FV PK+F S A + +EWF+ PF + G+ V+ +LH VLRPFLLRR K++V LP K E+++ C LS +Q +LY + + A A+ L+ N ++QLRK+CNHPF+ F + +P+ + P +GK +L +L + + GHR L+F Q T +D++EDFL + SL Y RLDG+T A DR ++ FN SD CFL+STRAGGLGLNLQ ADTVIIFD+DWNP DLQA R HRIGQ +V +LRL++ SVEE I + A KL + +VI AG F Sbjct: 448 ILVGGTLKEYQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLITYLHEVKKEPGPFLVIVPLSTITNWTLEFEKWAPSLTTIVYKGNPNQRKSLQYQVRSGNF-------------------------------------QVLLTTYEYIIKDRSSL-------AKHDWSHMIIDEGHRMKNAQSKLSFTLTKFYRTRNRLILTGTPLQNNLPELWALLNFVLPKIFNS-AKTFDEWFNTPFANTGGQ-------------------------------------------EKLELTEEEMLLVIRRLHKVLRPFLLRRLKKEVEKDLPDKVEKVVKCKLSGLQQQLYEQMLKHNALFVGAGTEGATKGGIKGLN--NKIMQLRKICNHPFV------------------FDEVEGIINPNRENGPLLYRVAGKFELLDRVLPKFAASGHRVLMFFQMTQVMDIMEDFL--RMRSLKYMRLDGATKAEDRTGMLKLFNAPNSDYFCFLLSTRAGGLGLNLQ-SADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTD-------SVEEVILERAMQKLDIDGKVIQAGKF 929 The following BLAST results are available for this feature:
BLAST of NO10G00830 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO10G00830 ID=NO10G00830|Name=NO10G00830|organism=Nannochloropsis oceanica|type=gene|length=3785bpback to top protein sequence of NO10G00830.1 >NO10G00830.1-protein ID=NO10G00830.1-protein|Name=NO10G00830.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1004bpback to top Synonyms
Publications
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