NO10G00830, NO10G00830 (gene) Nannochloropsis oceanica

Overview
NameNO10G00830
Unique NameNO10G00830
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3785
Alignment locationchr10:269333..273117 -

Link to JBrowse

Properties
Property NameValue
DescriptionSNF2 domain-containing protein / helicase domain-containing protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:269333..273117 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0042393histone binding
GO:0005524ATP binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR000330SNF2_N
IPR014001Helicase_ATP-bd
IPR001650Helicase_C
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
BLAST of NO10G00830 vs. NCBI_GenBank
Match: GAC72587.1 (chromatin remodeling complex SWI/SNF, component SWI2 [Moesziomyces antarcticus T-34])

HSP 1 Score: 338.2 bits (866), Expect = 8.800e-89
Identity = 224/609 (36.78%), Postives = 300/609 (49.26%), Query Frame = 0
Query:  185 VLEGRVLRNYQKMGLSWLLSLHKNQLNGILADEMGLGKTIQVIALLLHLHLQQGIRGPHLIVLPLSVLSGWEDELRRYAPSIRVYTHRGEKGVRKTAFHRVMQECFGRASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTYEILLQDDSTLRLSSLSSSLPPWHFLIIDEGHRLKNAKSKLLHILRKLNVKR-RLLLTGTPLQNDLKELFTLLRFVQPKLFGSKAASLEEWFDQPFDGSRGKGSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLSQLHGVLRPFLLRRTKRQVLASLPKKEERLIPCPLSAIQIRLYHLL---------QDASRASSSASPSLASIPFSSRLSTANLLIQLRKVCNHPFLLLDQHFKHTAKPYWQLSSFSPLPLSSSPHSSSSPSFLPSSGKLLVLSAILRRLSFLGHRPLIFSQFTSTLDVIEDFLIKHLPSLPYCRLDGSTPAGDRERIIDAFNRNASDVSCFLISTRAGGLGLNLQKGADTVIIFDSDWNPQNDLQAMARCHRIGQTQDVLVLRLVSVGPGGGGVMSVEEHIQKVAQSKLRREARVIGAGMF 784
            +L G  L+ YQ  GL W++SL+ N+LNGILADEMGLGKTIQ I+L+  L   +   GP L+++PLS L+ W +E  ++APS+    ++G   VRK    R+    F                                         TTYE +++D   L           W  +IIDEGHR+KN +SKL   L +    R RLLLTGTPLQN+L EL+ LL FV P++F S   S +EWF+ PF  +  +G                                                      ++ +LH VLRPFLLRR K+ V + LP K E++I C +SA+Q++LY  +         +D S A   A P              N ++QLRK+CNHP++                  F  + L+ +P   + P    S+GK  +L  +L +L    HR LIF Q T+ +D++EDFL        Y RLDGST   DR +++  FN   S+   F++STRAGGLGLNLQ  ADTVII+DSDWNP  DLQA  R HRIGQ  +V +LRLV+         SVEE I   AQ KL  E +VI AG F
Sbjct:  605 ILSGGTLKEYQMKGLQWMISLYNNRLNGILADEMGLGKTIQTISLITFLMEYKKQNGPFLVIVPLSTLTNWVNEFNKWAPSVSTLVYKGTPNVRKQLTGRLRSMNF-------------------------------------QVLLTTYEYIIKDKHLL-------GKIKWVHMIIDEGHRMKNTQSKLTITLTQFYTSRYRLLLTGTPLQNNLPELWALLNFVLPRIFNS-VKSFDEWFNTPFTNTGNEGG-------------------------------------------MMLNEEEALLIIKRLHKVLRPFLLRRLKKDVASELPDKVEKVIKCKMSALQLKLYQQMKKHKMILSGEDNSTAGKKAKP-------QGIRGLQNAIMQLRKICNHPYV------------------FEQVELAINPTKENGPDLYRSAGKFELLDRLLPKLFATKHRVLIFFQMTAIMDIMEDFL--RYRGFKYLRLDGSTKPDDRSQLLKMFNAPGSEYFVFILSTRAGGLGLNLQ-SADTVIIYDSDWNPHQDLQAQDRAHRIGQKMEVRILRLVT-------EKSVEETILARAQDKLEIEGKVIQAGKF 1090          
BLAST of NO10G00830 vs. NCBI_GenBank
Match: ETS60968.1 (hypothetical protein PaG_04898 [Moesziomyces aphidis DSM 70725])

HSP 1 Score: 338.2 bits (866), Expect = 8.800e-89
Identity = 224/609 (36.78%), Postives = 300/609 (49.26%), Query Frame = 0
Query:  185 VLEGRVLRNYQKMGLSWLLSLHKNQLNGILADEMGLGKTIQVIALLLHLHLQQGIRGPHLIVLPLSVLSGWEDELRRYAPSIRVYTHRGEKGVRKTAFHRVMQECFGRASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTYEILLQDDSTLRLSSLSSSLPPWHFLIIDEGHRLKNAKSKLLHILRKLNVKR-RLLLTGTPLQNDLKELFTLLRFVQPKLFGSKAASLEEWFDQPFDGSRGKGSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLSQLHGVLRPFLLRRTKRQVLASLPKKEERLIPCPLSAIQIRLYHLL---------QDASRASSSASPSLASIPFSSRLSTANLLIQLRKVCNHPFLLLDQHFKHTAKPYWQLSSFSPLPLSSSPHSSSSPSFLPSSGKLLVLSAILRRLSFLGHRPLIFSQFTSTLDVIEDFLIKHLPSLPYCRLDGSTPAGDRERIIDAFNRNASDVSCFLISTRAGGLGLNLQKGADTVIIFDSDWNPQNDLQAMARCHRIGQTQDVLVLRLVSVGPGGGGVMSVEEHIQKVAQSKLRREARVIGAGMF 784
            +L G  L+ YQ  GL W++SL+ N+LNGILADEMGLGKTIQ I+L+  L   +   GP L+++PLS L+ W +E  ++APS+    ++G   VRK    R+    F                                         TTYE +++D   L           W  +IIDEGHR+KN +SKL   L +    R RLLLTGTPLQN+L EL+ LL FV P++F S   S +EWF+ PF  +  +G                                                      ++ +LH VLRPFLLRR K+ V + LP K E++I C +SA+Q++LY  +         +D S A   A P              N ++QLRK+CNHP++                  F  + L+ +P   + P    S+GK  +L  +L +L    HR LIF Q T+ +D++EDFL        Y RLDGST   DR +++  FN   S+   F++STRAGGLGLNLQ  ADTVII+DSDWNP  DLQA  R HRIGQ  +V +LRLV+         SVEE I   AQ KL  E +VI AG F
Sbjct:  590 ILSGGTLKEYQMKGLQWMISLYNNRLNGILADEMGLGKTIQTISLITFLMEYKKQNGPFLVIVPLSTLTNWVNEFNKWAPSVSTLVYKGTPNVRKQLTGRLRSMNF-------------------------------------QVLLTTYEYIIKDKHLL-------GKIKWVHMIIDEGHRMKNTQSKLTITLTQFYTSRYRLLLTGTPLQNNLPELWALLNFVLPRIFNS-VKSFDEWFNTPFTNTGNEGG-------------------------------------------MMLNEEEALLIIKRLHKVLRPFLLRRLKKDVASELPDKVEKVIKCKMSALQLKLYQQMKKHKMILSGEDNSTAGKKAKP-------QGIRGLQNAIMQLRKICNHPYV------------------FEQVELAINPTKENGPDLYRSAGKFELLDRLLPKLFATKHRVLIFFQMTAIMDIMEDFL--RYRGFKYLRLDGSTKPDDRSQLLKMFNAPGSEYFVFILSTRAGGLGLNLQ-SADTVIIYDSDWNPHQDLQAQDRAHRIGQKMEVRILRLVT-------EKSVEETILARAQDKLEIEGKVIQAGKF 1075          
BLAST of NO10G00830 vs. NCBI_GenBank
Match: XP_014658949.1 (RSC complex subunit [Moesziomyces antarcticus] >GAK63094.1 RSC complex subunit [Moesziomyces antarcticus])

HSP 1 Score: 338.2 bits (866), Expect = 8.800e-89
Identity = 224/609 (36.78%), Postives = 300/609 (49.26%), Query Frame = 0
Query:  185 VLEGRVLRNYQKMGLSWLLSLHKNQLNGILADEMGLGKTIQVIALLLHLHLQQGIRGPHLIVLPLSVLSGWEDELRRYAPSIRVYTHRGEKGVRKTAFHRVMQECFGRASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTYEILLQDDSTLRLSSLSSSLPPWHFLIIDEGHRLKNAKSKLLHILRKLNVKR-RLLLTGTPLQNDLKELFTLLRFVQPKLFGSKAASLEEWFDQPFDGSRGKGSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLSQLHGVLRPFLLRRTKRQVLASLPKKEERLIPCPLSAIQIRLYHLL---------QDASRASSSASPSLASIPFSSRLSTANLLIQLRKVCNHPFLLLDQHFKHTAKPYWQLSSFSPLPLSSSPHSSSSPSFLPSSGKLLVLSAILRRLSFLGHRPLIFSQFTSTLDVIEDFLIKHLPSLPYCRLDGSTPAGDRERIIDAFNRNASDVSCFLISTRAGGLGLNLQKGADTVIIFDSDWNPQNDLQAMARCHRIGQTQDVLVLRLVSVGPGGGGVMSVEEHIQKVAQSKLRREARVIGAGMF 784
            +L G  L+ YQ  GL W++SL+ N+LNGILADEMGLGKTIQ I+L+  L   +   GP L+++PLS L+ W +E  ++APS+    ++G   VRK    R+    F                                         TTYE +++D   L           W  +IIDEGHR+KN +SKL   L +    R RLLLTGTPLQN+L EL+ LL FV P++F S   S +EWF+ PF  +  +G                                                      ++ +LH VLRPFLLRR K+ V + LP K E++I C +SA+Q++LY  +         +D S A   A P              N ++QLRK+CNHP++                  F  + L+ +P   + P    S+GK  +L  +L +L    HR LIF Q T+ +D++EDFL        Y RLDGST   DR +++  FN   S+   F++STRAGGLGLNLQ  ADTVII+DSDWNP  DLQA  R HRIGQ  +V +LRLV+         SVEE I   AQ KL  E +VI AG F
Sbjct:  606 ILSGGTLKEYQMKGLQWMISLYNNRLNGILADEMGLGKTIQTISLITFLMEYKKQNGPFLVIVPLSTLTNWVNEFNKWAPSVSTLVYKGTPNVRKQLTGRLRSMNF-------------------------------------QVLLTTYEYIIKDKHLL-------GKIKWVHMIIDEGHRMKNTQSKLTITLTQFYTSRYRLLLTGTPLQNNLPELWALLNFVLPRIFNS-VKSFDEWFNTPFTNTGNEGG-------------------------------------------MMLNEEEALLIIKRLHKVLRPFLLRRLKKDVASELPDKVEKVIKCKMSALQLKLYQQMKKHKMILSGEDNSTAGKKAKP-------QGIRGLQNAIMQLRKICNHPYV------------------FEQVELAINPTKENGPDLYRSAGKFELLDRLLPKLFATKHRVLIFFQMTAIMDIMEDFL--RYRGFKYLRLDGSTKPDDRSQLLKMFNAPGSEYFVFILSTRAGGLGLNLQ-SADTVIIYDSDWNPHQDLQAQDRAHRIGQKMEVRILRLVT-------EKSVEETILARAQDKLEIEGKVIQAGKF 1091          
BLAST of NO10G00830 vs. NCBI_GenBank
Match: CDI52121.1 (probable SNF2-component of SWI/SNF global transcription activator complex [Melanopsichium pennsylvanicum 4])

HSP 1 Score: 337.8 bits (865), Expect = 1.100e-88
Identity = 223/609 (36.62%), Postives = 302/609 (49.59%), Query Frame = 0
Query:  185 VLEGRVLRNYQKMGLSWLLSLHKNQLNGILADEMGLGKTIQVIALLLHLHLQQGIRGPHLIVLPLSVLSGWEDELRRYAPSIRVYTHRGEKGVRKTAFHRVMQECFGRASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTYEILLQDDSTLRLSSLSSSLPPWHFLIIDEGHRLKNAKSKLLHILRKLNVKR-RLLLTGTPLQNDLKELFTLLRFVQPKLFGSKAASLEEWFDQPFDGSRGKGSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLSQLHGVLRPFLLRRTKRQVLASLPKKEERLIPCPLSAIQIRLYHLL---------QDASRASSSASPSLASIPFSSRLSTANLLIQLRKVCNHPFLLLDQHFKHTAKPYWQLSSFSPLPLSSSPHSSSSPSFLPSSGKLLVLSAILRRLSFLGHRPLIFSQFTSTLDVIEDFLIKHLPSLPYCRLDGSTPAGDRERIIDAFNRNASDVSCFLISTRAGGLGLNLQKGADTVIIFDSDWNPQNDLQAMARCHRIGQTQDVLVLRLVSVGPGGGGVMSVEEHIQKVAQSKLRREARVIGAGMF 784
            +L G  L+ YQ  GL W++SL+ N+LNGILADEMGLGKTIQ I+L+ +L   +   GP L+++PLS L+ W +E  ++AP++    ++G   VRK    R+    F                                         TTYE +++D   L           W  +IIDEGHR+KN +SKL   L +    R RLLLTGTPLQN+L EL+ LL FV P++F S   S +EWF+ PF  +  +G                                                      ++ +LH VLRPFLLRR K+ V + LP K E++I C +SA+Q++LY  +         +D ++A   A P              N ++QLRK+CNHP++                  F  + L+ +P   + P    S+GK  +L  +L +L    HR LIF Q T+ +D++EDFL        Y RLDGST   DR +++  FN   SD   F++STRAGGLGLNLQ  ADTVII+DSDWNP  DLQA  R HRIGQ  +V +LRLV+         SVEE I   AQ KL  E +VI AG F
Sbjct:  607 ILSGGTLKEYQIKGLQWMISLYNNRLNGILADEMGLGKTIQTISLITYLMEFKKQNGPFLVIVPLSTLTNWVNEFNKWAPTVSTLVYKGTPNVRKQLTGRLRSMNF-------------------------------------QVLLTTYEYIIKDKHLL-------GKIKWVHMIIDEGHRMKNTQSKLTITLTQFYTSRYRLLLTGTPLQNNLPELWALLNFVLPRIFNS-VKSFDEWFNTPFTNTGNEGG-------------------------------------------MMLNEEEALLIIKRLHKVLRPFLLRRLKKDVASELPDKVEKVIKCKMSALQLKLYQQMKKHKMILSGEDNTQAGKKAKP-------QGIRGLQNAIMQLRKICNHPYV------------------FEQVELAINPTKENGPDLYRSAGKFELLDRLLPKLFATKHRVLIFFQMTAIMDIMEDFL--RYRGFKYLRLDGSTKPDDRSQLLKLFNTPGSDYFIFILSTRAGGLGLNLQ-SADTVIIYDSDWNPHQDLQAQDRAHRIGQKMEVRILRLVT-------EKSVEETILARAQDKLEIEGKVIQAGKF 1092          
BLAST of NO10G00830 vs. NCBI_GenBank
Match: KIV85700.1 (hypothetical protein PV11_01361 [Exophiala sideris])

HSP 1 Score: 337.8 bits (865), Expect = 1.100e-88
Identity = 220/600 (36.67%), Postives = 304/600 (50.67%), Query Frame = 0
Query:  185 VLEGRVLRNYQKMGLSWLLSLHKNQLNGILADEMGLGKTIQVIALLLHLHLQQGIRGPHLIVLPLSVLSGWEDELRRYAPSIRVYTHRGEKGVRKTAFHRVMQECFGRASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTYEILLQDDSTLRLSSLSSSLPPWHFLIIDEGHRLKNAKSKLLHILRKLNVKR-RLLLTGTPLQNDLKELFTLLRFVQPKLFGSKAASLEEWFDQPFDGSRGKGSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLSQLHGVLRPFLLRRTKRQVLASLPKKEERLIPCPLSAIQIRLYHLLQDASRASSSASPSLASIPFSSRLSTANLLIQLRKVCNHPFLLLDQHFKHTAKPYWQLSSFSPLPLSSSPHSSSSPSFLPSSGKLLVLSAILRRLSFLGHRPLIFSQFTSTLDVIEDFLIKHLPSLPYCRLDGSTPAGDRERIIDAFNRNASDVSCFLISTRAGGLGLNLQKGADTVIIFDSDWNPQNDLQAMARCHRIGQTQDVLVLRLVSVGPGGGGVMSVEEHIQKVAQSKLRREARVIGAGMF 784
            +L G  L+ YQ  GL W++SL  N LNGILADEMGLGKTIQ I+L+ +L  ++  +GP L+++PLS L+ W  E  ++APS++   ++G    RK A + +    F                                         TTYE +++D   L       S   W  +I+DEGHR+KNA SKL + + +    R RL+LTGTPLQN+L EL+ LL FV P +F S   S +EWF+ PF  + G+                                                       V+ +LH VLRPFLLRR K+ V   LP K+ER++ C  SA+Q +LY  L   ++ + +          +S    +N+L+QLRK+CNHP++                  F P+    +P   ++ S   ++GK  +L  +L +    GHR L+F Q T  ++++EDFL   L  + Y RLDG+T A DR  ++  FN   S   CFL+STRAGGLGLNLQ  ADTVII+DSDWNP  DLQA  R HRIGQ  +V +LRL+S         SVEE I + AQ KL  + +VI AG F
Sbjct:  558 ILVGGTLKEYQLKGLQWMISLFNNNLNGILADEMGLGKTIQTISLITYLMEKKNQKGPFLVIVPLSTLTNWNLEFDKWAPSVKKIVYKGPPNTRKAAQYDIRNGNF-------------------------------------QVLLTTYEYVIKDRPVL-------SKIKWVHMIVDEGHRMKNANSKLSYTITQYYTTRYRLILTGTPLQNNLPELWALLNFVLPTIFKS-VKSFDEWFNTPFANTGGQDK-------------------------------------------MELSEEEQLLVIRRLHKVLRPFLLRRLKKDVEKDLPDKQERVVKCRFSALQTKLYMQLMTHNKLAVTDGKG----GKTSMRGLSNMLMQLRKLCNHPYV------------------FEPVEEQMNPGKGTNDSIWRTAGKFELLDRVLPKFLVTGHRVLMFFQMTQIMNIMEDFL--RLRGIQYLRLDGATKAEDRSELLRLFNEPGSPYFCFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQDLQAQDRAHRIGQKNEVRILRLISSN-------SVEEKILERAQFKLDMDGKVIQAGKF 1037          
BLAST of NO10G00830 vs. NCBI_GenBank
Match: CDH58619.1 (rsc complex subunit [Lichtheimia corymbifera JMRC:FSU:9682])

HSP 1 Score: 337.4 bits (864), Expect = 1.500e-88
Identity = 224/600 (37.33%), Postives = 309/600 (51.50%), Query Frame = 0
Query:  186 LEGRVLRNYQKMGLSWLLSLHKNQLNGILADEMGLGKTIQVIALLLHLHLQQGIRGPHLIVLPLSVLSGWEDELRRYAPSIRVYTHRGEKGVRKTAFHRVMQECFGRASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTYEILLQDDSTLRLSSLSSSLPPWHFLIIDEGHRLKNAKSKLLHILRK-LNVKRRLLLTGTPLQNDLKELFTLLRFVQPKLFGSKAASLEEWFDQPFDGSRGKGSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLSQLHGVLRPFLLRRTKRQVLASLPKKEERLIPCPLSAIQIRL-YHLLQDASRASSSASPSLASIPFSSRLSTANLLIQLRKVCNHPFLLLDQHFKHTAKPYWQLSSFSPLPLSSSPHSSSSPSFLPSSGKLLVLSAILRRLSFLGHRPLIFSQFTSTLDVIEDFLIKHLPSLPYCRLDGSTPAGDRERIIDAFNRNASDVSCFLISTRAGGLGLNLQKGADTVIIFDSDWNPQNDLQAMARCHRIGQTQDVLVLRLVSVGPGGGGVMSVEEHIQKVAQSKLRREARVIGAGMF 784
            L G  L+ YQ  GL W++SL+ N+LNGILADEMGLGKTIQ IAL+ HL   + + GP+LI+LP+S ++ W  E  ++APS++   ++G    RK   + + +  F                                         T+YE ++     L LS +      W ++I+DEGHR+KN  SKL   LR+  + + RL+L+GTPLQN+L EL++LL F+ P +F S   S EEWF  PF+    +G N                                                    V+ +LH VLRPF+LRR K+ V   LP K ER++ C +SA+QI+L  H+ +   R + S+S   +   F       N L QLRK+CNHPF+                  F  +    +P   S+      SGK+ +L  IL++L    H+ LIF Q T  +++IED++  H    PY RLDG+T + DR R++ AFN   S    FL+STRAGGLG+NLQ  ADTVI+FDSDWNPQ DLQA  R HRIGQT++VL+LRLV+         S+EE I   A  KL  + +VI AG F
Sbjct:  890 LVGGELKKYQLKGLQWMVSLYNNRLNGILADEMGLGKTIQTIALITHLMESKRVNGPYLIILPVSTMTNWAMEFEKWAPSVKTIIYKGPPDERKKLQNDIRRGDF-------------------------------------HVLLTSYEYIINSKDRLLLSKVQ-----WLYMIVDEGHRMKNTNSKLTTTLRRHYHSQYRLILSGTPLQNNLAELWSLLNFILPSVFKS-VQSFEEWFSAPFN---VQGVN----------------------------------------VKIDLNEEEKLLVIKRLHKVLRPFVLRRLKQDVELELPSKVERVVKCRMSALQIKLTQHIQKSGLRLAISSSDPASKGKFK---HWNNALQQLRKICNHPFV------------------FREVENVINPSHESNELLYRVSGKVELLDRILQKLQATNHKVLIFFQMTHIMNIIEDYM--HYRGFPYLRLDGNTKSDDRARLLQAFNAPDSTHFAFLLSTRAGGLGINLQ-AADTVILFDSDWNPQQDLQAQDRAHRIGQTREVLILRLVTAN-------SIEEEIVARANHKLDIDGKVIQAGKF 1372          
BLAST of NO10G00830 vs. NCBI_GenBank
Match: KII74173.1 (putative global transcription activator SNF2L2 [Thelohanellus kitauei])

HSP 1 Score: 337.4 bits (864), Expect = 1.500e-88
Identity = 226/607 (37.23%), Postives = 302/607 (49.75%), Query Frame = 0
Query:  185 VLEGRVLRNYQKMGLSWLLSLHKNQLNGILADEMGLGKTIQVIALLLHLHLQQGIRGPHLIVLPLSVLSGWEDELRRYAPSIRVYTHRGEKGVRKTAFHRVMQECFGRASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTYEILLQDDSTLRLSSLSSSLPPWHFLIIDEGHRLKNAKSKLLHIL-RKLNVKRRLLLTGTPLQNDLKELFTLLRFVQPKLFGSKAASLEEWFDQPFDGSRGKGSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLSQLHGVLRPFLLRRTKRQVLASLPKKEERLIPCPLSAIQIRLYHLLQDASRA-SSSASPSLASIPFSSRLSTANLLIQLRKVCNHPFLL------LDQHFKHTAKPYWQLSSFSPLPLSSSPHSSSSPSFLPSSGKLLVLSAILRRLSFLGHRPLIFSQFTSTLDVIEDFLIKHLPSLPYCRLDGSTPAGDRERIIDAFNRNASDVSCFLISTRAGGLGLNLQKGADTVIIFDSDWNPQNDLQAMARCHRIGQTQDVLVLRLVSVGPGGGGVMSVEEHIQKVAQSKLRREARVIGAGMF 784
            +LEG  L+ YQ  GL W++SL  N+LNGILADEMGLGKTIQ IA   +L   + I GPH++V+PLS +S W+ E +++ P + V T++G +  R+    RV    F                                         TTYE +++D + L       S  PW ++++DEGHR+KN   KL  IL     V  RLLLTGTPLQN L EL+ LL F+ P +F     + E+WF+ PF  +  +                                                       ++ +LH +LRPFLLRR K++V A LP+K E +I C +S++Q  +YHL Q+   A S S   S    P        N L+QLRKVCNHPFL       + +H+ H   P                    SP     SGK  ++  IL +L    HR LIF Q T  + ++ED+L  +     Y RLDGST + DR +++D FN   S    F++STRAGGLGLNLQ  ADTVI+FDSDWNPQ DLQA  R HRIGQ  +V VLRL++         S+EE I   A+ KL  + +VI AGMF
Sbjct:  416 ILEGGQLKEYQIKGLEWMVSLFNNKLNGILADEMGLGKTIQTIAFFAYLMEFKRIAGPHIVVVPLSTISNWQMEFQKWCPKMDVLTYKGPQTYRRQMAPRVKTVKFN-------------------------------------ILLTTYEFVMKDKALL-------SKVPWKYMVVDEGHRMKNQDCKLTLILTSNYKVPYRLLLTGTPLQNRLPELWALLNFLLPNIFNC-CTTFEQWFNAPFANTGER---------------------------------------------VELNEEETYLIIRRLHKILRPFLLRRLKKEVEAQLPEKVEYVIKCHMSSLQKIIYHLTQNNIPALSQSQEGSKGRQP----RILLNTLMQLRKVCNHPFLFPQIEESMVKHWSHEVDPL------------------HSPLIYRVSGKFELMDRILPKLKSKNHRCLIFCQMTQLMSILEDYL--NFSKYMYLRLDGSTKSEDRAKLLDLFNAENSPYFIFILSTRAGGLGLNLQ-SADTVILFDSDWNPQQDLQAQDRAHRIGQKNEVRVLRLITAN-------SIEERILAAARFKLNMDEKVIQAGMF 900          
BLAST of NO10G00830 vs. NCBI_GenBank
Match: XP_011387409.1 (putative SWI/SNF catalytic subunit [Ustilago maydis 521] >KIS71283.1 putative SWI/SNF catalytic subunit [Ustilago maydis 521])

HSP 1 Score: 337.4 bits (864), Expect = 1.500e-88
Identity = 224/609 (36.78%), Postives = 300/609 (49.26%), Query Frame = 0
Query:  185 VLEGRVLRNYQKMGLSWLLSLHKNQLNGILADEMGLGKTIQVIALLLHLHLQQGIRGPHLIVLPLSVLSGWEDELRRYAPSIRVYTHRGEKGVRKTAFHRVMQECFGRASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTYEILLQDDSTLRLSSLSSSLPPWHFLIIDEGHRLKNAKSKLLHILRKLNVKR-RLLLTGTPLQNDLKELFTLLRFVQPKLFGSKAASLEEWFDQPFDGSRGKGSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLSQLHGVLRPFLLRRTKRQVLASLPKKEERLIPCPLSAIQIRLYHLL---------QDASRASSSASPSLASIPFSSRLSTANLLIQLRKVCNHPFLLLDQHFKHTAKPYWQLSSFSPLPLSSSPHSSSSPSFLPSSGKLLVLSAILRRLSFLGHRPLIFSQFTSTLDVIEDFLIKHLPSLPYCRLDGSTPAGDRERIIDAFNRNASDVSCFLISTRAGGLGLNLQKGADTVIIFDSDWNPQNDLQAMARCHRIGQTQDVLVLRLVSVGPGGGGVMSVEEHIQKVAQSKLRREARVIGAGMF 784
            +L G  L+ YQ  GL W++SL+ N+LNGILADEMGLGKTIQ I+L+ +L   +   GP L+++PLS L+ W +E  ++APS+    ++G   VRK    R+    F                                         TTYE +++D   L           W  +IIDEGHR+KN +SKL   L +    R RLLLTGTPLQN+L EL+ LL FV P++F S   S +EWF+ PF  +  +G                                                      ++ +LH VLRPFLLRR K+ V + LP K E++I C +SA+Q++LY  +         +D S A   A P              N ++QLRK+CNHP++                  F  + L+ +P   + P     +GK  +L  +L +L    HR LIF Q T+ +D++EDFL        Y RLDGST   DR +++  FN   SD   F++STRAGGLGLNLQ  ADTVII+DSDWNP  DLQA  R HRIGQ  +V +LRLV+         SVEE I   AQ KL  E +VI AG F
Sbjct:  596 ILSGGTLKEYQMKGLQWMISLYNNRLNGILADEMGLGKTIQTISLITYLMEFKKQNGPFLVIVPLSTLTNWVNEFNKWAPSVSTLIYKGTPNVRKQLTGRLRSMNF-------------------------------------QVLLTTYEYIIKDKHLL-------GKIKWVHMIIDEGHRMKNTQSKLTITLTQFYTSRYRLLLTGTPLQNNLPELWALLNFVLPRIFNS-VKSFDEWFNTPFTNTGSEGG-------------------------------------------MMLNEEEALLIIKRLHKVLRPFLLRRLKKDVASELPDKVEKVIKCKMSALQLKLYQQMKKHKMILSGEDNSTAGKKAKP-------QGIRGLQNAIMQLRKICNHPYV------------------FEQVELAINPTKENGPDLYRVAGKFELLDRLLPKLFATKHRVLIFFQMTAIMDIMEDFL--RYRGFKYLRLDGSTKPDDRSQLLKLFNAPGSDYFVFILSTRAGGLGLNLQ-SADTVIIYDSDWNPHQDLQAQDRAHRIGQKMEVRILRLVT-------EKSVEETILARAQDKLEIEGKVIQAGKF 1081          
BLAST of NO10G00830 vs. NCBI_GenBank
Match: CBQ70591.1 (probable SNF2-component of SWI/SNF global transcription activator complex [Sporisorium reilianum SRZ2])

HSP 1 Score: 337.0 bits (863), Expect = 2.000e-88
Identity = 223/609 (36.62%), Postives = 300/609 (49.26%), Query Frame = 0
Query:  185 VLEGRVLRNYQKMGLSWLLSLHKNQLNGILADEMGLGKTIQVIALLLHLHLQQGIRGPHLIVLPLSVLSGWEDELRRYAPSIRVYTHRGEKGVRKTAFHRVMQECFGRASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTYEILLQDDSTLRLSSLSSSLPPWHFLIIDEGHRLKNAKSKLLHILRKLNVKR-RLLLTGTPLQNDLKELFTLLRFVQPKLFGSKAASLEEWFDQPFDGSRGKGSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLSQLHGVLRPFLLRRTKRQVLASLPKKEERLIPCPLSAIQIRLYHLL---------QDASRASSSASPSLASIPFSSRLSTANLLIQLRKVCNHPFLLLDQHFKHTAKPYWQLSSFSPLPLSSSPHSSSSPSFLPSSGKLLVLSAILRRLSFLGHRPLIFSQFTSTLDVIEDFLIKHLPSLPYCRLDGSTPAGDRERIIDAFNRNASDVSCFLISTRAGGLGLNLQKGADTVIIFDSDWNPQNDLQAMARCHRIGQTQDVLVLRLVSVGPGGGGVMSVEEHIQKVAQSKLRREARVIGAGMF 784
            +L G  L+ YQ  GL W++SL+ N+LNGILADEMGLGKTIQ I+L+ +L   +   GP L+++PLS L+ W +E  ++APS+    ++G   VRK    R+    F                                         TTYE +++D   L           W  +IIDEGHR+KN +SKL   L +    R RLLLTGTPLQN+L EL+ LL FV P++F S   S +EWF+ PF  +  +G                                                      ++ +LH VLRPFLLRR K+ V + LP K E++I C +SA+Q++LY  +         +D S A   A P              N ++QLRK+CNHP++                  F  + L+ +P   + P     +GK  +L  +L +L    HR LIF Q T+ +D++EDFL        Y RLDG+T   DR +++  FN   SD   F++STRAGGLGLNLQ  ADTVII+DSDWNP  DLQA  R HRIGQ  +V +LRLV+         SVEE I   AQ KL  E +VI AG F
Sbjct:  607 ILSGGTLKEYQMKGLQWMISLYNNRLNGILADEMGLGKTIQTISLITYLMEFKKQNGPFLVIVPLSTLTNWVNEFNKWAPSVSTLVYKGTPNVRKQLTGRLRSMNF-------------------------------------QVLLTTYEYIIKDKHLL-------GKIKWVHMIIDEGHRMKNTQSKLTITLTQFYTSRYRLLLTGTPLQNNLPELWALLNFVLPRIFNS-VKSFDEWFNTPFTNTGNEGG-------------------------------------------MMLNEEEALLIIKRLHKVLRPFLLRRLKKDVASELPDKVEKVIKCKMSALQLKLYQQMKKHKMILSGEDNSTAGKKAKP-------QGIRGLQNAIMQLRKICNHPYV------------------FEQVELAINPTKENGPDLFRVAGKFELLDRLLPKLFATKHRVLIFFQMTAIMDIMEDFL--RYRGFKYLRLDGATKPDDRSQLLKLFNAPGSDYFVFILSTRAGGLGLNLQ-SADTVIIYDSDWNPHQDLQAQDRAHRIGQKMEVRILRLVT-------EKSVEETILARAQDKLEIEGKVIQAGKF 1092          
BLAST of NO10G00830 vs. NCBI_GenBank
Match: SCU84670.1 (LAMI_0C08416g1_1 [Lachancea mirantina])

HSP 1 Score: 337.0 bits (863), Expect = 2.000e-88
Identity = 223/600 (37.17%), Postives = 306/600 (51.00%), Query Frame = 0
Query:  185 VLEGRVLRNYQKMGLSWLLSLHKNQLNGILADEMGLGKTIQVIALLLHLHLQQGIRGPHLIVLPLSVLSGWEDELRRYAPSIRVYTHRGEKGVRKTAFHRVMQECFGRASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTYEILLQDDSTLRLSSLSSSLPPWHFLIIDEGHRLKNAKSKLLHILRKL-NVKRRLLLTGTPLQNDLKELFTLLRFVQPKLFGSKAASLEEWFDQPFDGSRGKGSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLSQLHGVLRPFLLRRTKRQVLASLPKKEERLIPCPLSAIQIRLYHLLQDASRASSSASPSLASIPFSSRLSTANLLIQLRKVCNHPFLLLDQHFKHTAKPYWQLSSFSPLPLSSSPHSSSSPSFLPSSGKLLVLSAILRRLSFLGHRPLIFSQFTSTLDVIEDFLIKHLPSLPYCRLDGSTPAGDRERIIDAFNRNASDVSCFLISTRAGGLGLNLQKGADTVIIFDSDWNPQNDLQAMARCHRIGQTQDVLVLRLVSVGPGGGGVMSVEEHIQKVAQSKLRREARVIGAGMF 784
            +L G  L+ YQ  GL W++SL+ N LNGILADEMGLGKTIQ I+L+ +LH  +   GP L+++PLS ++ W  E  ++APS+    ++G    RK+  ++V    F                                         TTYE +++D S+L       +   W  +IIDEGHR+KNA+SKL   L K    + RL+LTGTPLQN+L EL+ LL FV PK+F S A + +EWF+ PF  + G+                                                       V+ +LH VLRPFLLRR K++V   LP K E+++ C LS +Q +LY  +   +     A    A+      L+  N ++QLRK+CNHPF+                  F  +    +P+  + P     +GK  +L  +L + +  GHR L+F Q T  +D++EDFL   + SL Y RLDG+T A DR  ++  FN   SD  CFL+STRAGGLGLNLQ  ADTVIIFD+DWNP  DLQA  R HRIGQ  +V +LRL++         SVEE I + A  KL  + +VI AG F
Sbjct:  448 ILVGGTLKEYQLKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLITYLHEVKKEPGPFLVIVPLSTITNWTLEFEKWAPSLTTIVYKGNPNQRKSLQYQVRSGNF-------------------------------------QVLLTTYEYIIKDRSSL-------AKHDWSHMIIDEGHRMKNAQSKLSFTLTKFYRTRNRLILTGTPLQNNLPELWALLNFVLPKIFNS-AKTFDEWFNTPFANTGGQ-------------------------------------------EKLELTEEEMLLVIRRLHKVLRPFLLRRLKKEVEKDLPDKVEKVVKCKLSGLQQQLYEQMLKHNALFVGAGTEGATKGGIKGLN--NKIMQLRKICNHPFV------------------FDEVEGIINPNRENGPLLYRVAGKFELLDRVLPKFAASGHRVLMFFQMTQVMDIMEDFL--RMRSLKYMRLDGATKAEDRTGMLKLFNAPNSDYFCFLLSTRAGGLGLNLQ-SADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTD-------SVEEVILERAMQKLDIDGKVIQAGKF 929          
The following BLAST results are available for this feature:
BLAST of NO10G00830 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
GAC72587.18.800e-8936.78chromatin remodeling complex SWI/SNF, component SW... [more]
ETS60968.18.800e-8936.78hypothetical protein PaG_04898 [Moesziomyces aphid... [more]
XP_014658949.18.800e-8936.78RSC complex subunit [Moesziomyces antarcticus] >GA... [more]
CDI52121.11.100e-8836.62probable SNF2-component of SWI/SNF global transcri... [more]
KIV85700.11.100e-8836.67hypothetical protein PV11_01361 [Exophiala sideris... [more]
CDH58619.11.500e-8837.33rsc complex subunit [Lichtheimia corymbifera JMRC:... [more]
KII74173.11.500e-8837.23putative global transcription activator SNF2L2 [Th... [more]
XP_011387409.11.500e-8836.78putative SWI/SNF catalytic subunit [Ustilago maydi... [more]
CBQ70591.12.000e-8836.62probable SNF2-component of SWI/SNF global transcri... [more]
SCU84670.12.000e-8837.17LAMI_0C08416g1_1 [Lachancea mirantina][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL053nonsL053Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL052nonsL052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR004ncniR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR017ngnoR017Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR015ngnoR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR014ngnoR014Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO10G00830.1NO10G00830.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|425258gene_4137Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100135g16gene5191Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO10G00830.1NO10G00830.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO10G00830 ID=NO10G00830|Name=NO10G00830|organism=Nannochloropsis oceanica|type=gene|length=3785bp
ATGAGGAACGTGGCCGGAGGGAGGAGAGGGGGGAGGGGGAGGGAGAGGAA
GATGAAAGAGGAGAAGGAGAAGAAGAAGCGGGTACGGTTGTCTTGGTCAG
ACGAGGAGAAGGAAAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAGTGAC
GATGACAGCGATAGTGACGACGAGGGTGTGGTGGGTCATTGGGGGGGTAG
GAGGGGGGAGGAGGAGGAGGAGGAGGCTATGGAAGGGCCAACGACGCGGT
CAGGCACCACGATCCGATATGGGCCAACCTCCTACCCTTCCGCTGCTGGT
GTGGATGCTGGTATACCTTCGTGGAGGCGAGGGGAAAGGCCGGGGGATGG
AGGGAGGGCATTGTCGGCCCTGAGGCCATTGGAGAGCGAGCGGGAGATGG
AGGCAAGGAAGGCGAGGAGGTTGCAGCTACTGGTGGAGAGGACAGCGGCG
ATGCGCACTCGGCTGGAGAAGGGGATCGCCTCCCTCCTCCCTGCTGAGGG
TGTCGAAGGGGAGGGTGGAGGGGAGGGAGGGGGGAAGGCACTGCCGGATG
TGGTGTTGGAGGGGAGGGTGTTGAGGAACTACCAGAAGATGGGTTTGTCG
TGGTTGCTGTCGTTGCACAAGAATCAGCTCAATGGTATCTTGGCCGATGA
GATGgtgggtgggtcgttgaagtggaggagggagggagggagggaggggg
ggagggcatgtcttatggacgactgctcaccaagcgaatttcttccttcc
ttccttccttccctcccttcctcccaccttagGGGTTGGGCAAGACGATT
CAAGTCATTGCCCTCCTCCTCCACCTCCACCTCCAACAAGGCATCCGTGG
GCCTCACCTTATCGTCCTCCCTCTGTCGGTGCTGAGTGGTTGGGAAGACG
AGCTGAGGCGATACGCGCCGTCGATCAGAGTGTACACGCATAGAGGGGAG
AAGGGCGTGAGGAAAACAGCCTTCCACCGGGTCATGCAGGAGTGCTTTGG
TCGGGCTAGTGGTGGGAAAGGAGGAGGAGGAGGAAGAGGAGGAAGAATTG
GAGAGGTCGATGATGCCGCTTCCTCCCCCTCCTCCTCCCATTCTTCCCCT
TCCTCGCCCCTCGTCGTCCTTACCACGTACGAAATCCTCCTTCAGGACGA
CTCCACCCTCCGCCTCTCCTCCCTCTCGTCCTCCCTCCCTCCCTGGCACT
TTCTCATAATTGATGAGGGCCATCGGCTGAAAAATGCTAAATCCAAACTC
CTTCATATTTTGAGAAAATTAAACGTCAAGCGACGGTTACTCTTAACAGG
AACACCGTTACAAAACGACCTGAAGGAACTGTTTACCCTTCTGAGGTTTG
TCCAGCCCAAACTTTTTGGTTCGAAGGCGGCCAGCTTGGAGGAGTGGTTC
GATCAGCCCTTCGATGGAAGTAGGGGAAAGGGCAGCAATGGCAGCAACAG
CAGCAACATGGAGAATACCATCGGAGGAGGGGATGAAGGAGGAGGAGGAG
GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGACAAGGGGAC
AAGGAACGACGCAGAATCGTCCTCTCCAAGGAAGACGAAGAGCTGGTTCT
CTCGCAGCTCCACGGTGTCCTCCGCCCCTTCCTCCTCCGCCGGACCAAGC
GCCAGGTCCTTGCCTCCCTCCCCAAGAAAGAAGAACGCCTCATCCCCTGC
CCGCTCTCTGCAATCCAAATCCGCCTCTATCATCTCCTTCAAGACGCCTC
CCGTGCTTCCTCCTCGGCCTCCCCTTCCTTGGCCTCCATCCCTTTCTCCA
GTCGTCTCTCCACTGCCAATCTCCTCATCCAACTCCGCAAGGTCTGCAAC
CACCCTTTCCTCCTCCTCGACCAGCATTTCAAACACACCGCAAAACCCTA
CTGGCAGCTCTCCTCGTTCTCTCCCCTACCTCTCTCGTCCTCCCCCCATT
CCTCCTCCTCTCCCTCCTTCCTTCCTTCCTCTGGCAAACTGCTCGTCCTA
TCGGCCATCCTCCGTCGCCTTTCATTCCTGGGTCATCGCCCATTAATCTT
CTCTCAATTTACGTCCACATTGGACGTAATCGAAGACTTCCTCATAAAGC
ATTTACCGTCCCTGCCGTACTGCCGACTCGATGGGAGCACCCCCGCCGGA
GACAGGGAAAGGATTATCGATGCGTTCAACCGTAACGCCTCGGACGTTTC
CTGCTTCCTCATCTCGACGCGCGCGGGAGGCTTGGGGCTGAATTTACAAA
AGgtgcgtttttgattcatttgctgattgtttgaataattatttgattta
tttacatcatatgtacttttctacttgtgtctatgcatagttctatacat
ctctgcgttgcatccatgcacgtctttattttcttcatgccttttcatat
ttgtctcttcatcccccctcgttggattaactggccttgcctctggtcct
cacagGGGGCCGACACCGTGATTATCTTCGACTCGGATTGGAACCCCCAG
AATGACCTCCAGGCCATGGCCCGCTGCCACCGCATTGGACAAACCCAGGA
CGTCCTCGTGCTGCGCCTTGTTTCCGTCGGCCCCGGGGGGGGAGGGGTGA
TGAGTGTGGAAGAACATATCCAGAAGGTGGCGCAGTCGAAGTTGAGGAGG
GAGGCGAGGGTAATTGGTGCGGGAATGTTTACTTGGGGGAGGGAGGGAGG
GAGGAAAGGAGGGAATAAGAGGAGGATCAGGAGAGGGAATAAGGGGGAGG
AGGAAGAGGGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGATGCTCGG
AAGGTACTCCAGTCGTTGATGGAGATGGAGTGTGCGATGAGAGGATCGAG
GGTGACTCATGTAGAGGAGGAGAGAAGAAAGGGGATGGAGGGAGGGAGAG
AGGAAGGGGAGGTGGCGATGGAAGAGGAGGTTTGTGTGCAGCGTCACTTG
TTGACCAAAGATGCGATGGACAAGGCGTGTGCTCGCAATGAGTACGAATT
GGCAGTACTGATGTCTTTGGAGAAGGAGGGAATTGAGAATGAAAATGAGG
AGAAAAAGGAGGAGGACGAAGGGGAGGGAGTTGGAGGGGAGGACTGCTTG
ATGGGCTTTAACGACCTGCCTGCCTGGTGGGAGGAGGTCGAGGAAAAGAT
GAGGAAAGGAGGGAGGAGGGAGGAAGGAGAGGAGGAGAAGGTAAGGAAGC
GACATAGGACGGTTCGGTATGAGTCCTTGAGGGATGTGGACATGTTCCAA
CAGAGGGTGAGGGAGGTAAAGGAGGAAAGAGGGGAAGAAGGAGAGGGGGT
GAGAAAATGGAAAGACAAAGGAATAAGCGAAATAGAATGGTAAGGGGGAA
GGAGAGGAGAAGGGTGTGGATGGTGGCAATGATAATGATAATAGAAGCAG
AAGCAGCAGTAGCAGCAGCAGAAACGGAGACAATAATGTGTTCGCTGACT
ACGAGGGAAGATATGATGGTGAAGGGGGTGGGGAAGAGGACTCGGGGGGG
GGGGATGATGAGGATGAGGATGAGGATGAGGAGGAGGAAGAGGAGAAGGG
ACGGAGAGCATGTCATAGGCCCCTAAGTATTTCTGTCGATAGAGCCAAGG
GACAAGGGGATAAGAGCGCGAAATGTAGAGGGGGATAACATGCCGTTGTC
GGCTTGCTCGTGTGTACAGTTTTAACCCTCGAGCCCTGTTTAACCATCTT
TAATTATGTAACAACAACAAAAATAGAACGAATGGGTATAATAAAGGGAG
ACTAATGGTGTCCAAGGGATACAAATAAAGAGCTA
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protein sequence of NO10G00830.1

>NO10G00830.1-protein ID=NO10G00830.1-protein|Name=NO10G00830.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1004bp
MRNVAGGRRGGRGRERKMKEEKEKKKRVRLSWSDEEKEKEEEEEEEEESD
DDSDSDDEGVVGHWGGRRGEEEEEEAMEGPTTRSGTTIRYGPTSYPSAAG
VDAGIPSWRRGERPGDGGRALSALRPLESEREMEARKARRLQLLVERTAA
MRTRLEKGIASLLPAEGVEGEGGGEGGGKALPDVVLEGRVLRNYQKMGLS
WLLSLHKNQLNGILADEMGLGKTIQVIALLLHLHLQQGIRGPHLIVLPLS
VLSGWEDELRRYAPSIRVYTHRGEKGVRKTAFHRVMQECFGRASGGKGGG
GGRGGRIGEVDDAASSPSSSHSSPSSPLVVLTTYEILLQDDSTLRLSSLS
SSLPPWHFLIIDEGHRLKNAKSKLLHILRKLNVKRRLLLTGTPLQNDLKE
LFTLLRFVQPKLFGSKAASLEEWFDQPFDGSRGKGSNGSNSSNMENTIGG
GDEGGGGGGGGGGGGGGGGGGQGDKERRRIVLSKEDEELVLSQLHGVLRP
FLLRRTKRQVLASLPKKEERLIPCPLSAIQIRLYHLLQDASRASSSASPS
LASIPFSSRLSTANLLIQLRKVCNHPFLLLDQHFKHTAKPYWQLSSFSPL
PLSSSPHSSSSPSFLPSSGKLLVLSAILRRLSFLGHRPLIFSQFTSTLDV
IEDFLIKHLPSLPYCRLDGSTPAGDRERIIDAFNRNASDVSCFLISTRAG
GLGLNLQKGADTVIIFDSDWNPQNDLQAMARCHRIGQTQDVLVLRLVSVG
PGGGGVMSVEEHIQKVAQSKLRREARVIGAGMFTWGREGGRKGGNKRRIR
RGNKGEEEEGEEEEEEEEEEDARKVLQSLMEMECAMRGSRVTHVEEERRK
GMEGGREEGEVAMEEEVCVQRHLLTKDAMDKACARNEYELAVLMSLEKEG
IENENEEKKEEDEGEGVGGEDCLMGFNDLPAWWEEVEEKMRKGGRREEGE
EEKVRKRHRTVRYESLRDVDMFQQRVREVKEERGEEGEGVRKWKDKGISE
IEW*
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Synonyms
Publications