NO10G00760, NO10G00760 (gene) Nannochloropsis oceanica

Overview
NameNO10G00760
Unique NameNO10G00760
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1547
Alignment locationchr10:249843..251389 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:249843..251389 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO10G00760 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL053nonsL053Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL052nonsL052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR004ncniR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR017ngnoR017Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR015ngnoR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000936NSK000936Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO10G00760.1NO10G00760.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|586698gene_4144Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO10G00760.1NO10G00760.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO10G00760 ID=NO10G00760|Name=NO10G00760|organism=Nannochloropsis oceanica|type=gene|length=1547bp
CCCCCCATCTTCACATTCGCCATAGAAGCAATACGGCCCCCGCTGCCTTC
GCATTCACAACTGTGTCTTGACCCACATAAGCATGTTTTCTTATTCAGTT
TGGAGGCGTTCCTATTCCTCTGATGCAATTAGAGGACCCGCACTTTACGC
CGTACGTGCTTAGCGGGTGAGCTACTCCCTCCGAGTCTTGAGTTCTCCGA
TTCTCACACACGGGGCGTATTCAACTGCATGCCATGGCAGCAACTTGAGT
CCTATTGTATCGTCATTTGAAAAGGCACGCCGACTCTTATCCAATAAAGC
ATGCTCATACATTCACCAAATCACATAGAAGGCACGCTCCTACCTCTTAC
CTACCCACATGACCATCGGGCTCTTATGTACCACCCTAAACGTTCGCTCC
GTGGCAACGAACTGgtaagtgatgaacgatattcatataacgcgctcaca
ctcttgtcaaatgcgctttcgagccgaggtacacgcacgcaactctcatc
tcattaacaaatcccttatatttctaatagGACAGAAGCAGACAAGGAGG
AGTTCCTCACTCAAGTTAAGAAGAATGGCTTGGATGACCTTGAGGCCCTC
GCGGATGATATAGGGACGAAGTCCGAGCAGGAGCTTGACTTCTTCCTTTC
CTTGCTTCACGAACACCTTGGTAGGCAATATCTCCAAGCCTTCGCGAACG
CGCAACTTGCCCATGAACCAAGGGCGAAGCGGAACAAAATCATGGCAAAG
GTTTTAGAGACGGTGATGAACGGGACTTTCGAAGGCCACATGCGCAGAAT
TTTGACGTATGCCACATCAACCGACTCGGATATGCTGTTTACCAAAGACG
CAGCGGGAACAGGAGGAGCGGAAGCAGGAAAGATGGGGGGCGTTGGGCGG
CGTCAGGTGACAGCGCCGGCTCCCAAGAAGGGTTATACGAAGAGGAAGAT
GAAGGAAGAGACGAAGAAGAAAAAATATTCCACCAAGAAATACAAGGCGA
AAGCGCCCACCCCAAAGAACGAGCAGGAGGTGGAGGAGAAAGCTGAGGAA
GACAGTACGCTGGAAAAGCAGCCATCTGCCCCAACCCCGAAGGAACCCAC
ATTTGCAAGCGCTTTCGTGATAGTCGAGCAGGAGGGGCTGATTAAGGGTG
GGGTCGACGACGTGGAAGAGGATGTTGTGGATGCTGGTATGTATGAGGAG
AACGTGGATGACTGGGAGCCTGCTGCGCGAGTAGCGGAAAACACAGAGCA
AAAGATGGAGGGATAAGGGCAGGATGCGTACATGGAGTAACACTTTGAAG
AGAATGCTACGGGGGAAGGAGAAATATTAGGAGCGTCAGGAAGACATGTT
TGCCTTTGCAGTGCTATCCAATGAAAAAAACGTTGAGACTGAAAGAGGCA
AGAAGAAAAGAGACCCAGGAGCATGTATGTTTCTGGGGTGCAATCGAATG
AAGCAGTCAAGACGAAGAGGGCACGAACAGGACAAAAGAATGGTAGAAAA
ACTTGACCAATCCCATCACCCTCCACAGGACTATGGCTCCATTGCTT
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protein sequence of NO10G00760.1

>NO10G00760.1-protein ID=NO10G00760.1-protein|Name=NO10G00760.1|organism=Nannochloropsis oceanica|type=polypeptide|length=264bp
MTIGLLCTTLNVRSVATNWTEADKEEFLTQVKKNGLDDLEALADDIGTKS
EQELDFFLSLLHEHLGRQYLQAFANAQLAHEPRAKRNKIMAKVLETVMNG
TFEGHMRRILTYATSTDSDMLFTKDAAGTGGAEAGKMGGVGRRQVTAPAP
KKGYTKRKMKEETKKKKYSTKKYKAKAPTPKNEQEVEEKAEEDSTLEKQP
SAPTPKEPTFASAFVIVEQEGLIKGGVDDVEEDVVDAGMYEENVDDWEPA
ARVAENTEQKMEG*
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Synonyms
Publications