NO10G00730, NO10G00730 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO10G00730 vs. NCBI_GenBank
Match: EWM25316.1 (wd sam and u-box domain-containing protein 1 [Nannochloropsis gaditana]) HSP 1 Score: 158.3 bits (399), Expect = 5.500e-35 Identity = 136/415 (32.77%), Postives = 174/415 (41.93%), Query Frame = 0 Query: 22 AHGTD---RGGNAPLVPTASVSLPTATTHCPLLIRPAHSGRKSFSEALYRALLRLAPKCKTHIQAVFRFFKVRTKLSHQQVQQILISALGLELVREAWAEARKEIDGHAEMMMAETPHPMDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRRVQLNPVVSREMEPQAMRFQQNTVSWHANESLSXXXXXXXXXXXXXXXXXXXXXXXXXSCPPSSPSLHGEDQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPRSTPHASSVGISVDLEDEDLLLQDAPNAFVCPISLQLMTRAVVAGDGYSYQREALDTWILRNRRERKPLRSPMTNAPMAPFYIPSFTLRSMVSDYVNTARASHRR 434 AHG D G P+ ++S PT T + P +R RKSF+E+LYRALLRL P K IQAVFR+FK LS QV LI+ALG+ +VR+AW EAR +I + + H +++ XXXXXXXX V++ V + PQ R ++ ++H E + PP + + +S+ V L ED L AP+AFVCPISL+LMTRAVVAGDG++YQ+EALD WIL+ RRE PL SPMTNAPMAPFYIPSFTLRS++ DYV R R Sbjct: 18 AHGGDISREAGIRPIDSINTISGPTITHYPPQSLR---CRRKSFAESLYRALLRLDPARKPRIQAVFRYFKNHKDLSQDQVHHSLIAALGIHIVRKAWTEARADIHELLVVEPGDNNHTLEN-----------------------------------------------------------------------KSSLXXXXXXXXXXXVEMGTVPAPPTSPQ--RQEEKKYTYHPGEERKEARDRKEKVLKFRFRHGLGNEDGQLAHPPFNACI------------------------------------------TSMEDDVQLNVEDDLADKAPHAFVCPISLELMTRAVVAGDGFAYQQEALDEWILQKRREHFPLHSPMTNAPMAPFYIPSFTLRSLIGDYVEKVRTKRPR 314
BLAST of NO10G00730 vs. NCBI_GenBank
Match: XP_005853577.1 (wd sam and u-box domain-containing protein 1 [Nannochloropsis gaditana CCMP526] >EKU22781.1 wd sam and u-box domain-containing protein 1 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 156.8 bits (395), Expect = 1.600e-34 Identity = 135/415 (32.53%), Postives = 173/415 (41.69%), Query Frame = 0 Query: 22 AHGTD---RGGNAPLVPTASVSLPTATTHCPLLIRPAHSGRKSFSEALYRALLRLAPKCKTHIQAVFRFFKVRTKLSHQQVQQILISALGLELVREAWAEARKEIDGHAEMMMAETPHPMDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRRVQLNPVVSREMEPQAMRFQQNTVSWHANESLSXXXXXXXXXXXXXXXXXXXXXXXXXSCPPSSPSLHGEDQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPRSTPHASSVGISVDLEDEDLLLQDAPNAFVCPISLQLMTRAVVAGDGYSYQREALDTWILRNRRERKPLRSPMTNAPMAPFYIPSFTLRSMVSDYVNTARASHRR 434 AH D G P+ ++S PT T + P +R RKSF+E+LYRALLRL P K IQAVFR+FK LS QV LI+ALG+ +VR+AW EAR +I + + H +++ XXXXXXXX V++ V + PQ R ++ ++H E + PP + + +S+ V L ED L AP+AFVCPISL+LMTRAVVAGDG++YQ+EALD WIL+ RRE PL SPMTNAPMAPFYIPSFTLRS++ DYV R R Sbjct: 18 AHDGDISREAGIRPIDSINTISGPTITHYPPQSLR---CRRKSFAESLYRALLRLDPARKPRIQAVFRYFKNHKDLSQDQVHHSLIAALGIHIVRKAWTEARADIHELLVVEPGDNNHTLEN-----------------------------------------------------------------------KSSLXXXXXXXXXXXVEMGTVPAPPTSPQ--RQEEKKYTYHPGEERKEARDRKEKVLKFRFRHGLGNEDGQLAHPPFNACI------------------------------------------TSMEDDVQLNVEDDLADKAPHAFVCPISLELMTRAVVAGDGFAYQQEALDEWILQKRREHSPLHSPMTNAPMAPFYIPSFTLRSLIGDYVEKVRTKRPR 314
BLAST of NO10G00730 vs. NCBI_GenBank
Match: XP_002109494.1 (hypothetical protein TRIADDRAFT_53592 [Trichoplax adhaerens] >EDV27660.1 hypothetical protein TRIADDRAFT_53592 [Trichoplax adhaerens]) HSP 1 Score: 76.6 bits (187), Expect = 2.100e-10 Identity = 40/87 (45.98%), Postives = 58/87 (66.67%), Query Frame = 0 Query: 344 EDEDLLLQDAPNAFVCPISLQLMTRAVVAGDGYSYQREALDTWILRNRRERKPLRSPMTNAPM-APFYIPSFTLRSMVSDYVNTARA 430 E +D L P+ F+CPIS ++MT VVA DGYSYQR+A+++W+ R L SPMTNAP+ A IP+ TL+S++ Y++ R+ Sbjct: 454 ELKDRLDNSIPDEFLCPISREVMTDPVVASDGYSYQRQAIESWLNGGNR----LTSPMTNAPLNASLLIPNKTLKSLIQKYLDGDRS 536
BLAST of NO10G00730 vs. NCBI_GenBank
Match: XP_005236507.1 (PREDICTED: WD repeat, SAM and U-box domain-containing protein 1 isoform X1 [Falco peregrinus]) HSP 1 Score: 70.5 bits (171), Expect = 1.500e-8 Identity = 33/76 (43.42%), Postives = 49/76 (64.47%), Query Frame = 0 Query: 352 DAPNAFVCPISLQLMTRAVVAGDGYSYQREALDTWILRNRRERKPLRSPMTNAPM-APFYIPSFTLRSMVSDYVNT 427 D P+ F+CPI+ +LM V+A DGYSY++EA++ WI RR SPMTN P+ +P P+ TL+ +S ++ T Sbjct: 403 DIPDEFLCPITRELMKDPVIAADGYSYEKEAMENWISNQRRS-----SPMTNLPLHSPMLTPNRTLKMAISHWLET 473
BLAST of NO10G00730 vs. NCBI_GenBank
Match: XP_013153838.1 (PREDICTED: WD repeat, SAM and U-box domain-containing protein 1 isoform X2 [Falco peregrinus]) HSP 1 Score: 70.5 bits (171), Expect = 1.500e-8 Identity = 33/76 (43.42%), Postives = 49/76 (64.47%), Query Frame = 0 Query: 352 DAPNAFVCPISLQLMTRAVVAGDGYSYQREALDTWILRNRRERKPLRSPMTNAPM-APFYIPSFTLRSMVSDYVNT 427 D P+ F+CPI+ +LM V+A DGYSY++EA++ WI RR SPMTN P+ +P P+ TL+ +S ++ T Sbjct: 325 DIPDEFLCPITRELMKDPVIAADGYSYEKEAMENWISNQRRS-----SPMTNLPLHSPMLTPNRTLKMAISHWLET 395
BLAST of NO10G00730 vs. NCBI_GenBank
Match: XP_005432735.1 (PREDICTED: WD repeat, SAM and U-box domain-containing protein 1 isoform X1 [Falco cherrug]) HSP 1 Score: 70.1 bits (170), Expect = 2.000e-8 Identity = 33/76 (43.42%), Postives = 49/76 (64.47%), Query Frame = 0 Query: 352 DAPNAFVCPISLQLMTRAVVAGDGYSYQREALDTWILRNRRERKPLRSPMTNAPM-APFYIPSFTLRSMVSDYVNT 427 D P+ F+CPI+ +LM V+A DGYSY++EA++ WI RR SPMTN P+ +P P+ TL+ +S ++ T Sbjct: 403 DIPDEFLCPITRELMKDPVIAADGYSYEKEAMENWISNQRRS-----SPMTNLPLHSPMLTPNRTLKMAISRWLET 473
BLAST of NO10G00730 vs. NCBI_GenBank
Match: KFO73589.1 (WD repeat, SAM and U-box domain-containing protein 1, partial [Cuculus canorus]) HSP 1 Score: 70.1 bits (170), Expect = 2.000e-8 Identity = 36/86 (41.86%), Postives = 53/86 (61.63%), Query Frame = 0 Query: 346 EDLLLQD----APNAFVCPISLQLMTRAVVAGDGYSYQREALDTWILRNRRERKPLRSPMTNAPM-APFYIPSFTLRSMVSDYVNT 427 EDL +Q P+ +CPI+ +LM V+A DGYSY+REA++ W+ NRR SPMTN P+ +P P+ TL+ +S ++ T Sbjct: 391 EDLRMQTRSVAVPDELLCPITRELMKDPVIAADGYSYEREAMENWLSNNRRS-----SPMTNLPLPSPLLTPNRTLKMAISRWLET 471
BLAST of NO10G00730 vs. NCBI_GenBank
Match: XP_009555727.1 (PREDICTED: WD repeat, SAM and U-box domain-containing protein 1 [Cuculus canorus]) HSP 1 Score: 70.1 bits (170), Expect = 2.000e-8 Identity = 36/86 (41.86%), Postives = 53/86 (61.63%), Query Frame = 0 Query: 346 EDLLLQD----APNAFVCPISLQLMTRAVVAGDGYSYQREALDTWILRNRRERKPLRSPMTNAPM-APFYIPSFTLRSMVSDYVNT 427 EDL +Q P+ +CPI+ +LM V+A DGYSY+REA++ W+ NRR SPMTN P+ +P P+ TL+ +S ++ T Sbjct: 391 EDLRMQTRSVAVPDELLCPITRELMKDPVIAADGYSYEREAMENWLSNNRRS-----SPMTNLPLPSPLLTPNRTLKMAISRWLET 471
BLAST of NO10G00730 vs. NCBI_GenBank
Match: XP_014136699.1 (PREDICTED: WD repeat, SAM and U-box domain-containing protein 1 isoform X2 [Falco cherrug]) HSP 1 Score: 70.1 bits (170), Expect = 2.000e-8 Identity = 33/76 (43.42%), Postives = 49/76 (64.47%), Query Frame = 0 Query: 352 DAPNAFVCPISLQLMTRAVVAGDGYSYQREALDTWILRNRRERKPLRSPMTNAPM-APFYIPSFTLRSMVSDYVNT 427 D P+ F+CPI+ +LM V+A DGYSY++EA++ WI RR SPMTN P+ +P P+ TL+ +S ++ T Sbjct: 325 DIPDEFLCPITRELMKDPVIAADGYSYEKEAMENWISNQRRS-----SPMTNLPLHSPMLTPNRTLKMAISRWLET 395
BLAST of NO10G00730 vs. NCBI_GenBank
Match: OCT63506.1 (hypothetical protein XELAEV_18044607mg [Xenopus laevis]) HSP 1 Score: 69.7 bits (169), Expect = 2.600e-8 Identity = 36/87 (41.38%), Postives = 55/87 (63.22%), Query Frame = 0 Query: 350 LQDAPNAFVCPISLQLMTRAVVAGDGYSYQREALDTWILRNRRERKPLRSPMTNAPMAPFYI-PSFTLRSMVSDYVNTARASHRREK 436 L + PN F+CPI+ +LMT V+A DGYSY+R+A++ WI R +R SPMTN P+ + P+ TL+ ++ ++ R +HR K Sbjct: 220 LSNIPNEFLCPITWELMTDPVIASDGYSYERKAIEDWISRKKR-----TSPMTNLPLENLLLTPNRTLKMALNRWLE--RQNHREAK 299 The following BLAST results are available for this feature:
BLAST of NO10G00730 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO10G00730 ID=NO10G00730|Name=NO10G00730|organism=Nannochloropsis oceanica|type=gene|length=2941bpback to top protein sequence of NO10G00730.2 >NO10G00730.2-protein ID=NO10G00730.2-protein|Name=NO10G00730.2|organism=Nannochloropsis oceanica|type=polypeptide|length=444bpback to top protein sequence of NO10G00730.1 >NO10G00730.1-protein ID=NO10G00730.1-protein|Name=NO10G00730.1|organism=Nannochloropsis oceanica|type=polypeptide|length=424bpback to top Synonyms
Publications
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