NO10G00670, NO10G00670 (gene) Nannochloropsis oceanica

Overview
NameNO10G00670
Unique NameNO10G00670
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1707
Alignment locationchr10:223090..224796 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:223090..224796 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO10G00670 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL053nonsL053Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL052nonsL052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR004ncniR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR017ngnoR017Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR015ngnoR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO10G00670.1NO10G00670.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO10G00670.1NO10G00670.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO10G00670 ID=NO10G00670|Name=NO10G00670|organism=Nannochloropsis oceanica|type=gene|length=1707bp
ATGCCGTCCTTCTACCAGAAGCAACAAGACCGAAAGAGGAGGCAAGAGGA
GGCAGCGGCAGGAGCAGCTGCGGCTGCGGTAACTGCGGCTCAGCCACCAT
CGTTGCTACCATTGCTGGCCCCGCTGCCTAGTGGCGGGGGAGGCCCCTCA
TGCAGTAGCAACCTCGTAGACCACCACCGGCATGCCACCTCCAGCAACAG
CCATCTGTCATTCATGCCTCCCTCCCTGTCTTCCCCACCTGCATCCATGC
TCGCCTCCTCGCTAGGGTCTCCACCTTCCCCTTCCTTACTGTTTAGCAGC
CAGTTCACCAGTCGATTTGAGGCTTCCTCGTCGGCCTGGCCCCCTACGAG
TACCAGCAGCGGTGGCGGCGGTGGTGGTAGGGGCCATGGTGGTGGCGCAG
GCGGCACGTTTGGTACGACCAATACCACTTTCAACAATACCACCAGCATC
ACAACTCCATGCTCAGAAGTAGACCCCACTCCACCGCCCCCACACTTGCT
TCTCGGCCGCATGTCAGCCCAAGCCCCAGTACCACCATCGGCAACAGAAG
TAAGAACAGCAACATCAACAAGGAGAAGAAGAACAACAGTATCCGCAGCC
ATAGGTCCACATGCGTCTCCTCCTCCTTCTCCCCAACACAGTCTGATAGG
GGGGTATGTGGGTGGTGCTGGTGAAGGGGAAGGGGGGGGGAATCTCGCCA
TGTCGGAGAAGGCGCCAACTGAGTTTGGTGACCCTGATTACCAATTTCTT
TTGGATTCATTGGTGGCAGACGGGGACGGAAACTGGTTCGCTGACGAGGA
GGAGGAGAGGGACCCTACGTATGACCCGAATGAGGAGGAAGAGGAGGAAG
AGGAGGAGAGCGACGACGATGACGATGTCGATAGTACGAGTAGGGATAGT
GGGAGCAGTAGCACCAGCAGCAGCAGTGGTGATGATTTTGAAGACGATGA
AGACGATGCGATTCCTTTACAAGAGGTAGAGGAGCTGCTGGCCGAGACAG
GTGCAATGAGCTACCTCGCCAATCTCCCGCAACAGCACGTCCAGGCCCAC
GCCCCTACAGCAGCACCTACACGCAATGCCCAAGGCCGCCTACTCGTCCC
CCTCCTGCCCTCCCACCCTGGTCCTCGCTTTGGTCTCTCCCCCGGCACCT
GGCAGGCACTCATGCACACCGGCGTGAGGGAAGATGAACGGGGTCGACTC
GCCTCTCAAATGGTCCGACACTTGCAGTTACTGGTTCAAAACGGCGCCGT
TATGGCCCATAATCTTGCCTTAAATCAAGGAGGAGAAGGGGAGGGAGAGA
GAGAGGAGAAGGAGGCGTTTCTGGACGTGCAGGCCATGGTGAAGGACGTG
CATACATTGCGAGATAAGGCGTGGCGTTATTTCGGGTTTGAGCCGGGACC
GACCGGGAAAGGTGCGTATCGAGAGCGTTTAGTGTCTACCAGCACTGCTG
CTGCTACTGCTACTGGTGATGGAGCAGGAGGAGGAGGAGGAAGGGATAGA
GGGGGGGGAGCGGGAGCAACAGAGGGACGAAGAAGAAAAAGGAACAGCAG
AAACAGGTCGTCCTCCAGCAGCAGCAGTTGCAGCAGCAAGGGAAGAGAGA
TCATCGCTTCACCCGTGGCGCTGCCCAGAGAATTGAAGGGCGATCAAAGT
CTCTTATGGACGTACCAGGAATCGCGGCTGCTGCTGAGCTCGTCTGCGTC
AGATTAG
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protein sequence of NO10G00670.1

>NO10G00670.1-protein ID=NO10G00670.1-protein|Name=NO10G00670.1|organism=Nannochloropsis oceanica|type=polypeptide|length=569bp
MPSFYQKQQDRKRRQEEAAAGAAAAAVTAAQPPSLLPLLAPLPSGGGGPS
CSSNLVDHHRHATSSNSHLSFMPPSLSSPPASMLASSLGSPPSPSLLFSS
QFTSRFEASSSAWPPTSTSSGGGGGGRGHGGGAGGTFGTTNTTFNNTTSI
TTPCSEVDPTPPPPHLLLGRMSAQAPVPPSATEVRTATSTRRRRTTVSAA
IGPHASPPPSPQHSLIGGYVGGAGEGEGGGNLAMSEKAPTEFGDPDYQFL
LDSLVADGDGNWFADEEEERDPTYDPNEEEEEEEEESDDDDDVDSTSRDS
GSSSTSSSSGDDFEDDEDDAIPLQEVEELLAETGAMSYLANLPQQHVQAH
APTAAPTRNAQGRLLVPLLPSHPGPRFGLSPGTWQALMHTGVREDERGRL
ASQMVRHLQLLVQNGAVMAHNLALNQGGEGEGEREEKEAFLDVQAMVKDV
HTLRDKAWRYFGFEPGPTGKGAYRERLVSTSTAAATATGDGAGGGGGRDR
GGGAGATEGRRRKRNSRNRSSSSSSSCSSKGREIIASPVALPRELKGDQS
LLWTYQESRLLLSSSASD*
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Synonyms
Publications