NO10G00660, NO10G00660 (gene) Nannochloropsis oceanica

Overview
NameNO10G00660
Unique NameNO10G00660
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2972
Alignment locationchr10:220044..223015 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:220044..223015 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO10G00660 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL053nonsL053Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL052nonsL052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR004ncniR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR017ngnoR017Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR015ngnoR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000923NSK000923Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO10G00660.1NO10G00660.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO10G00660.1NO10G00660.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO10G00660 ID=NO10G00660|Name=NO10G00660|organism=Nannochloropsis oceanica|type=gene|length=2972bp
ATGCGTGCCTTAGATACCCTGTGGCAAGGGGGGGGGATAACCGTGCATTG
CATGACCCTTCCCGCTTTTCAACAGATGCCGCCTTTGTTGCTGGCCCCTC
CCTGTCCTCCTCCCCCCTTTCCTCCCCTCCCCTACAACTCCTTCACTCCT
TCAGAAACGCGCCTCCTCATTCGAGGCCTGGTGGTAGCACCACACACCCC
GCCCCTTCCTTCCTCCTCCTTTCCCTCCTCCACCACCCCCGTGGAGCAAC
AGCAGCAACAGCAACAGTACCCCCACAATATCTACCCCTTCATCCATTCC
GTCATGCTTGCCGGTCGAAGCCCGTCGGAAATTGCCTGGTACCACCACAC
CACACAGCAAGACCCCGATACCGCCCGCTGGCGCCAAGCCGCCATTGCCT
CTCTCAAACTCACCTTTTCCCGCGCCCCCCTGGCGGGTCAACCTCCCCCC
TTCACTCCCGAGGAAGACGCGCTGCTTTGGACGGGCCAACGAGCGgtagg
tgggaaatgggtccacatcgccaggtcactcctccctcaccgcctcccgc
acgacctgatgatgaggtggcggaggattgagttcgcgtcgccgccgacc
agAGAGACGCTGGAGAGGGCGTACGAGGAGAGGAAGGCAGCGATTGGAGG
GAAGCCTTTGAAGATTACGAATGGGAAGAGGGGCCGGCCGGCGAAGGGGA
GGGGGGGGTGGTGGAGGGGGTGGAGGGGATGATGAGGTACAGCGGGCAGG
TGGTGGAAGAAGAGGACATGGCGGGAAGGAAGGGTAGGGACAAGGGCGGG
CGAGGAGGAGAAGGAGGGGAAGGGGGAGGAGTAATGTTTGGAATGGCGCC
GGAAGAGTCGAGAATGGGATGGGATGAAATGGAGATGGATTTCAGTATGC
AGTCGTTTCCATTTCTCCCTCCTCCTTTTTCGCCACGAAGAGGAGGCGGA
GGAGGGGGGGAGGGGGCAGTAGCAGCGACAGCAGCAGAAGGAGGGGCAGG
CAAAAGAAAGAGAGGTCGACCAAAAAAGACGGATGAAGAACGAGCGGCGG
ATGCAGCTGCCCGAATGGCGGCAGCTGCAGCAGGGGGAGAAGGAGGGAGG
GTGGGAGGGAAGATGCATTTGACGGAGGCGGAAATGACACCTGCCCAAAG
AAAATATGCGAGAAAGAAGCAGAGGAAGGCGGCGGCTGCTGCTGCTGCTG
CCGCCTTAGCAAGTTGTGGTGGTGGAGGGCCTCCAGGGTCACCACTGATC
TTGACGGGCCCAGAGCAGCAGCAGCAGCAGCAGCAGAAAAAGCAGAAACG
TCTTCGAATTACAAAGAAGGGGCAAGCAGCAACGATAGCAGCGGCAGCAG
TAGTAGAAAGGGGGGTAATGAATGATAACGAGGAAGAGGGAGGGAAGGAG
GGAGGGAAAAAGAGACAGCTGGTGTCGGTGGAAGAGAGTGGTGGTTTCGA
GACACGTATGTCCTTCCCTGCTTTCTCGCCGGGGGGGGAAGTGACGCGCC
TGGGAGAAGAAGGGGCAAGGAGGGAAGGAGGGGAGGGTAGTTTGATGAGA
GGGTGGGGGCGGAGACCCAGGGGCGAGAGTAGCAACTCGTCGCCCTCTCG
GCTGTCGTTTCCCATCTCGCAAGGGGCGGGAGGAGGGGAAGGGGTGGAGG
AAGGAGGGGGGAAGTATTCAGTTGGGTTTGGAGACATGGAGGAGACTGCG
TTGGGCATGGATGTTGGAAATCTGTCCTTCATGGCTGGTGGCCCTCCCTC
CCTCCCTTCTTCCTCCTTCTCCTCGTTTCCCTCCGCATCACGTCCAGGGG
CGGGTGGTTCGAAAAGTCGAGGAGGAGGAGGAAGAGGAGGAGGAGGGAAG
GAAGGGAAAGATAAGTCGGTTGGGGCTTTTGCTCCAGTCCCGCCCTTGCC
AGCTCAGCCGGCTGGAGGAAGAGGAGGAGAGGGAGGAGGAGGAGGTGGAG
GTGGTGGTAGTGGTGGTGGAAGAGGTAGCGGTAGCAGTAGGAACGGCACT
GGGTTTGCAGGCCCTTCTGTTCAGGAGCTGAATTTTAGCCGGCAGTTGCA
ACAGCAGCAGCAACAGCAGCAACAGCAGCAGCAGCAGCTTAAAAGAAGTG
GTGGTAGAAGAGCAGCAACAGAGAGCAAGGACTCTTCACCGGCGGTGACC
GCGCGTCGCATCTCTCCTCGAAAGCTCTCTCGCCCTCCCTTCACATCCTC
CTCCACCTCCTCCTCCACTACTCTTGTTCCTCTTCCTCTTTCTCTCCCTG
TCCGGCAGGAGGAGGAGAAAGAAGGAAACGAGGGGGAGGAGGGGGAGGCG
GGGGAGTTCGAGCACGAATTTATTCCCGATGACGGCGATGAGGAGGAGGA
GGAGGGAGTGGAGGAAGGGATGGATGGCTTGGTTGGGTATCCAATGTCTT
CTATTCCACACTCACTCTCTGCACCCTCTGCTCCTGCCTCTGGTCCTGCT
CCTACTGCAGCTCTTACTGCTCCTGCTTCTGCTGCCGCTGCGACGGTGAG
GAGTAACAGCAGCAATGACAAAAGCAGCTCTCCCCGTGGCAATAACCAAG
AGAGGAGAGGGAGAAAGATTCCCGCTGCTGCTGCTGCTGCTGCAACAGCA
GTGGCTGCGGCCCGTCCTCTGTCCGCTGTGGATGAAGGCGAATACACGGA
GGAGGAAGTGGTCGCAAGTGACGAGGAAGAGGAGGATGAGGAGGAGGGAG
GGAGGAAGCGAGGGGAGGAGGAGGGATTTGAGAAGGGTGTGATTTCGGAT
TCTGAGGGTGAGGCAGGAGCGCCCTCTCCAGAAAAGAGTCCGCGATTCGA
GCGAGGAGGAGGAGGAAGGGGAGGTGGAAAAAGGGTGGGAGGGGGAGGTG
GGGGAGGAGGAGGGGGAAGTGGCAGTAAAGGAAGTCAACCTCAACATCAG
CAGCAGCAGCAGCAGCGTAGGAGCTCTCCTCGTAAAGCAGGAGGCGGAGG
ATCAATACAGAGGAGAGGATGA
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protein sequence of NO10G00660.1

>NO10G00660.1-protein ID=NO10G00660.1-protein|Name=NO10G00660.1|organism=Nannochloropsis oceanica|type=polypeptide|length=955bp
MRALDTLWQGGGITVHCMTLPAFQQMPPLLLAPPCPPPPFPPLPYNSFTP
SETRLLIRGLVVAPHTPPLPSSSFPSSTTPVEQQQQQQQYPHNIYPFIHS
VMLAGRSPSEIAWYHHTTQQDPDTARWRQAAIASLKLTFSRAPLAGQPPP
FTPEEDALLWTGQRARDAGEGVRGEEGSDWREAFEDYEWEEGPAGEGEGG
VVEGVEGMMRYSGQVVEEEDMAGRKGRDKGGRGGEGGEGGGVMFGMAPEE
SRMGWDEMEMDFSMQSFPFLPPPFSPRRGGGGGGEGAVAATAAEGGAGKR
KRGRPKKTDEERAADAAARMAAAAAGGEGGRVGGKMHLTEAEMTPAQRKY
ARKKQRKAAAAAAAAALASCGGGGPPGSPLILTGPEQQQQQQQKKQKRLR
ITKKGQAATIAAAAVVERGVMNDNEEEGGKEGGKKRQLVSVEESGGFETR
MSFPAFSPGGEVTRLGEEGARREGGEGSLMRGWGRRPRGESSNSSPSRLS
FPISQGAGGGEGVEEGGGKYSVGFGDMEETALGMDVGNLSFMAGGPPSLP
SSSFSSFPSASRPGAGGSKSRGGGGRGGGGKEGKDKSVGAFAPVPPLPAQ
PAGGRGGEGGGGGGGGGSGGGRGSGSSRNGTGFAGPSVQELNFSRQLQQQ
QQQQQQQQQQLKRSGGRRAATESKDSSPAVTARRISPRKLSRPPFTSSST
SSSTTLVPLPLSLPVRQEEEKEGNEGEEGEAGEFEHEFIPDDGDEEEEEG
VEEGMDGLVGYPMSSIPHSLSAPSAPASGPAPTAALTAPASAAAATVRSN
SSNDKSSSPRGNNQERRGRKIPAAAAAAATAVAAARPLSAVDEGEYTEEE
VVASDEEEEDEEEGGRKRGEEEGFEKGVISDSEGEAGAPSPEKSPRFERG
GGGRGGGKRVGGGGGGGGGGSGSKGSQPQHQQQQQQRRSSPRKAGGGGSI
QRRG*
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Synonyms
Publications