NO10G00600, NO10G00600 (gene) Nannochloropsis oceanica

Overview
NameNO10G00600
Unique NameNO10G00600
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1734
Alignment locationchr10:202302..204035 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:202302..204035 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO10G00600 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL052nonsL052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR004ncniR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR015ngnoR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000917NSK000917Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO10G00600.1NO10G00600.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO10G00600.1NO10G00600.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO10G00600 ID=NO10G00600|Name=NO10G00600|organism=Nannochloropsis oceanica|type=gene|length=1734bp
ATGGGGCCGACGTCGTCACCTCCGCAACAAGCAGACCTCGAGAAGCAAGC
TTACTTCGCCCGGCACTCAGCCCTCACCCAACACCTTGCGCGCCTCGAGC
ACGACCTCCAGCGGCTCGTGCCGCCCAGCCTTACAACCACACTTGCAACC
GAATCGTCTTACGAACATGTGCAAGCCCAAGTAGCATTTCGACGGAAGTT
GGGCGGGCTGCAGAGTGCGCTGGCCAAGGCCCGCGCACGCATACGGTGCA
TAAGTGGCGACAAGAAGGAGCAGCACCACCACCATCTTAACTTCGAAAAA
GGAGGACGAAGAGTAGAAGAAGAAAGAGGAGAAGCAGCAGCAACAGTTCC
CGTGGCCAGTGACAAAATTGAGGTGTACCTAGCATCTGTGCAAGATGGGC
TGCATGCTTTGGCCTTGGCCCATCGCCGGGAATTTGAGGCATTGCGCTGG
CAAGAGAGGGTGCTGACCAAGGATATGGAGAAGGCAATGACCACAGCTGC
TGCTGCTCCTGGAGAAAAGGATAATCGTGAAAAGAATTATAAAAAAAAGA
CTCTCAGCACTACCGGTAAGAGCAAGAGTGCCATAAGCACGAGCAGTGAG
ATGAAAGCACAACAATCACAGGCTAGAGTGCGCGTGATGGAAATTCAATC
AGCCATCGCGGCATTGGATGAAGAGATTCTTGCACATGGTGGTTTGACGG
GTGGGTGGCAGGCGGAGGAACATGAAAAATTTCTGGCTTTGTGGCAGGAT
TTTCGAGGACATGCCCGACCGAGGGAGGAAGAGGAGGAAGAGGATGAGGA
GGAGGAAGAGGAAGAGGATGAAGACCCGGTGGCAGAAGTCAAGGGCAATT
TGTTATTCTTGGATCGGGCGGTACGTGTTCTGTGGTCACGAAGTGAGGGG
GAGGTGATGCGGCATGTAGAATGGTACGTCAAACATCGCCATCGCATCCG
CGCTCGAGCACTGCGTGTCAGGCAGAGGAAGGAGGCCGAGGAGGAGGCAA
GGAGGGAAGAAGAGGAGAAGGGGTGGAATTTGGACGAAGTGACGCGCAAA
CGTCGCCTCGTAGCGGAATGGCGAAGACGACGGCAGCTACAGGAGGAGGA
AGAGGAGGAGGCACAAAAACTTCAGATGTGGGAAGCGCAGCAACGCAAGG
CTGCACAGGAAAAACGAAGAGCAGCCTTGACGAGGAAGCAATTGGCAAGG
CACCGGGAAGAGAAAGAGGAGAGAGAGCGACAGCAAACAGAAGAACAGAC
TCGGCTGGAGGAGGAAATGGAAGAGGAGGCGGAATACAGGCGGCTAGTCC
ACGAAGGGAAGGGAGGGAGGGAGGACGAGAAAGAGAGTCCGAACGTCTTA
AAATTAGTGTTGGAGCGAAGGGCGCGCTTGAGTCTAAGACATGCAAAGGA
GAGAAGAGAACGAGCATGGGCCATGCGACCTATGAGGCAGGCTGAAGAGA
GGTCGAGGCGACAACAGGCGGTCTTGCAGGAGGTGGCTTGGGAGGAGGCC
ATGAAGGGGAATGGGGATGATGTGATGAGCCAAGGAGGAGCAGGAGGAGA
ACGAATGGAGGAAGGAAAGACACGGCGATCATTGCCGCGTTTTGTATATC
GGGATGTGGGGAGGCTGAATCAATCGACGGAGGCCTCGAGCAGGCGGGCG
TATGACGGCGAGGAGTTGGATGCCAAGGACACAGCGCGCTTGTTTTGCTT
GGCTCACGAACGGCCCTTACCACCTGGGTTTTAA
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protein sequence of NO10G00600.1

>NO10G00600.1-protein ID=NO10G00600.1-protein|Name=NO10G00600.1|organism=Nannochloropsis oceanica|type=polypeptide|length=578bp
MGPTSSPPQQADLEKQAYFARHSALTQHLARLEHDLQRLVPPSLTTTLAT
ESSYEHVQAQVAFRRKLGGLQSALAKARARIRCISGDKKEQHHHHLNFEK
GGRRVEEERGEAAATVPVASDKIEVYLASVQDGLHALALAHRREFEALRW
QERVLTKDMEKAMTTAAAAPGEKDNREKNYKKKTLSTTGKSKSAISTSSE
MKAQQSQARVRVMEIQSAIAALDEEILAHGGLTGGWQAEEHEKFLALWQD
FRGHARPREEEEEEDEEEEEEEDEDPVAEVKGNLLFLDRAVRVLWSRSEG
EVMRHVEWYVKHRHRIRARALRVRQRKEAEEEARREEEEKGWNLDEVTRK
RRLVAEWRRRRQLQEEEEEEAQKLQMWEAQQRKAAQEKRRAALTRKQLAR
HREEKEERERQQTEEQTRLEEEMEEEAEYRRLVHEGKGGREDEKESPNVL
KLVLERRARLSLRHAKERRERAWAMRPMRQAEERSRRQQAVLQEVAWEEA
MKGNGDDVMSQGGAGGERMEEGKTRRSLPRFVYRDVGRLNQSTEASSRRA
YDGEELDAKDTARLFCLAHERPLPPGF*
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Synonyms
Publications