NO10G00480, NO10G00480 (gene) Nannochloropsis oceanica

Overview
NameNO10G00480
Unique NameNO10G00480
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2582
Alignment locationchr10:168905..171486 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:168905..171486 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO10G00480 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR004ncniR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR015ngnoR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO10G00480.1NO10G00480.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO10G00480.1NO10G00480.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO10G00480 ID=NO10G00480|Name=NO10G00480|organism=Nannochloropsis oceanica|type=gene|length=2582bp
ATGTTGGCGATCAGCCTTCCCCCCATTATACAACAGCACCAAGCTACCAC
CCATTACAGGCGGGCGGGCTGTTCGGGgtgaggctaccgctgttgatgca
gtcctgctaccgctgctgctagtgttgtactcatttaacatcttggctac
ctccccccacttcctccctcccttagCCAAGACGCCGGCACGATGAAGGC
CTATGGCAGCGGCAGTCGATCGAATAACAAGAAACCGCGTCGGATCTTGA
GTCATCGAAAAGAAAGAAAGAAAGGTGTCTCACTCAAAAGGCTGGCGGAA
GCCTTAGAGCACGACAGCTTGCTTTGTTGTCGCGCTGTCGCTCCCTCTGA
GGCAACGGCGGCATTGGAAAATGTCCAAGCGGGTCTGCTGGAGCGAGGCT
ACATTCTACTGTACCTAGATGATACTTCCCCGTCGCCCCTTTCCCCTATC
TCCTCCTATTACTCTTCTCCTGTCGCACCTGCGGCAGCTGCAGCAGCTGC
TGCTACTGCTAAGCAATGGCAGCAAGAAGAATACCAAAAATTGCTCGTGT
CCAATCGCGTGGCCGAAAAGTTAGGACAAATTAAGCAGCACTTCGATCGG
CTCGGCATGCCCCAGTCCCACGCCACCAACACCCGAAGCAGCAGCAGGAG
CAGGAGCAGGAGCAGCAGCAACAGCGGCGACAGCAGGATTAGCAGCAGCG
CTAAGATTTCAGACCCCCTGTACATCCATCCCTCCGACGCCATCACCACC
TTCCACTATCTCGAGCGTATTGGCCGCCTTGTCCTCAAGGCAGCTTCCTG
GGCTCTCTTTCCCCCCACCGATGCCACTCAAACTTTTCTTCCTCGCACTC
CCTCCTCCTCCTCCTCCCCCCGCTCTTCCTCTTCCTCATCATCCTCCTCC
TCCTTCTCCTCTTCCCCCCACTCCTCCTCGTTTTTCTCCACACACAATTC
CCATCAGATCAATCTAGAAGACGAGCTCCTTCCTCCCCTTCCCTCCCCTC
CGTCTCCCCTCTCCCCCTCCTTTTTTCTTCAGACTTCAACTACCCCTGCC
GTTGCTGCGGGCGCAGTGGCAGCAGCAGCAGCGGCCACCAGAAGGAAAGC
CAAGAAGAAAAGGGGGAAACGAGAAGAAGAGGATGATGGTCTGGAAGAAG
AAGAAGAAAAAGGAGGAGAAGAAAGAGGAGGAATAGGAGGATCAGTAACA
GGAGGAGAAGGGTTCCGATCTCGATTACGGGCGCGTGTGTATCAGGGTGG
GAAGAACGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGAGCGAGGACGC
CGATGCACGATTTGGGGCTGTTAAGTATTGTGGGCGTGATGGGACATGGG
CTCGAGGTGAAGGGAGAATCGAAAGGAGGGCCAGAGGGAGGAGGAAAATG
GGAGGAGGAGGAGCGAGGAAAGAGAGGGCACGTGGAGAAGGAGTGGAAGG
CGGTGGAGCCCATGTACGAGGAGGAGGAAGAATTGGAGGAGGATGGGTTT
GAGGTAGGGGGGGCAGTTGCCTTGTTGCCGCCGTGGACGGTGCTTGTGTG
TGTTGGTCGGATGCTGGATTACTACTCAGGGGGCGTCCTCAGTGCACCGG
CACGGAGGGTGTTGATTTCAAAAATTGAAAGTTTGAATTTGAATCGGAGT
AATGTGGAGGTGTGTTACTCGGTGCGAGGGAGGGAGGGAGGGCGATTGAA
CCCATACGAGgtccgtgaacgggtgtggaatattgcgccattatatcggg
atccgacaaaggacaaggaggtgatgaatgtggagtgctatgagagGGAG
AAAGGAGGGAAGGAGGAGGAGGAGGAGAGGGGATGGTTGTGGCGGAGGGA
GGAGGAGTTGAAGACAGGAGGGAAGGTGAAGAAGAGGGGGAGAGAGGCGG
CGGGGGAAGGGGGGGAGGAATGAGAAGAGGAGGAGGAGAAGAAGGGGGAG
AAGGAGGAGGAGGAGGAGGAGGAAGAGGAGGGAGAAGTGAGGGAGGGAAG
AAGTATTTGGGGAAGCTTGTCATTGATTTGGTTCATGATTGTGATGAGGA
AGAGGAGGGGGGAATAGAAGGAGCAGGAGCAGAGGCGGCGTCCGCAGCAG
TAGCAGCACTTGAAGATCCGGCGGAGGGCGAGGAGGAAAAGGGGGCGATA
ATGGTGGTGGAAAAAGGAGATGAAGAAGGAGTAGCTGCTGCTGCTGCCAC
TACAAACGCCGACCTACAATTGAAAGGGGAGGGGGAACCTGTTGAGAAGG
AGGGGAAAAAGTTTAAGAAAGAGAAAGATGAGGAAGAGGTTGAGGACGAA
GTGTTAGAGGTAGGAGTAGGCGGCTGTGCGGCGAGGCGCAGGTATGGAGC
GCCAACAGCAGCAGCAGCAGCAGCAGCTCCGGAAATAGTCGGAGGAAGAG
AAAGGGAGAGGGAGGGAAAGAAGGAAGGGGAGTGGAAGGAGGAGGAAAAT
GATGATGCGTCCAGGTGCTTGGTGAATGATTTCGGGGGGATGAAGGACGG
GATAGAAGAAAGAGGGGAGGAGAGGAGAGTAGGGGAGGCCATGTCGACAT
TGCAGTGGGAGGTGGAAGAGGGTGAAGAATAA
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protein sequence of NO10G00480.1

>NO10G00480.1-protein ID=NO10G00480.1-protein|Name=NO10G00480.1|organism=Nannochloropsis oceanica|type=polypeptide|length=799bp
MLAISLPPIIQQHQATTHYRRAGCSGQDAGTMKAYGSGSRSNNKKPRRIL
SHRKERKKGVSLKRLAEALEHDSLLCCRAVAPSEATAALENVQAGLLERG
YILLYLDDTSPSPLSPISSYYSSPVAPAAAAAAAATAKQWQQEEYQKLLV
SNRVAEKLGQIKQHFDRLGMPQSHATNTRSSSRSRSRSSSNSGDSRISSS
AKISDPLYIHPSDAITTFHYLERIGRLVLKAASWALFPPTDATQTFLPRT
PSSSSSPRSSSSSSSSSSFSSSPHSSSFFSTHNSHQINLEDELLPPLPSP
PSPLSPSFFLQTSTTPAVAAGAVAAAAAATRRKAKKKRGKREEEDDGLEE
EEEKGGEERGGIGGSVTGGEGFRSRLRARVYQGGKNGGREGGREGGRART
PMHDLGLLSIVGVMGHGLEVKGESKGGPEGGGKWEEEERGKRGHVEKEWK
AVEPMYEEEEELEEDGFEVGGAVALLPPWTVLVCVGRMLDYYSGGVLSAP
ARRVLISKIESLNLNRSNVEVCYSVRGREGGRLNPYEGERREGGGGGEGM
VVAEGGGVEDRREGEEEGERGGGGRGGGMRRGGGEEGGEGGGGGGGRGGR
SEGGKKYLGKLVIDLVHDCDEEEEGGIEGAGAEAASAAVAALEDPAEGEE
EKGAIMVVEKGDEEGVAAAAATTNADLQLKGEGEPVEKEGKKFKKEKDEE
EVEDEVLEVGVGGCAARRRYGAPTAAAAAAAPEIVGGREREREGKKEGEW
KEEENDDASRCLVNDFGGMKDGIEERGEERRVGEAMSTLQWEVEEGEE*
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Synonyms
Publications