NO10G00450, NO10G00450 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO10G00450 vs. NCBI_GenBank
Match: EWM25280.1 (Thioredoxin domain protein [Nannochloropsis gaditana]) HSP 1 Score: 248.8 bits (634), Expect = 3.800e-62 Identity = 118/178 (66.29%), Postives = 132/178 (74.16%), Query Frame = 0 Query: 55 HGATTTTAAIPQTKTKRRQKPVVSLSSEELLDHLEGWTTDVAIFFYAPWCPYCKLVGPYWDMVGEWHAEQQPPTPSLLVARFDCEQDALATDICVYMGVTHYPTIQYLGYGPYYQQSIWSFLSNLLIYFRLSAPKVNVERAVFFEGIPDPEVLKDWTNMMRGISSWHRWRKGGRKGVK 233 HGA +TK +QKPVVSL+SEELLDHLE W TD+AIFFYAPWCPYCKLVGPYWDM+GEWH Q TPSLL+ RFDCEQDALA DIC+YMGVT YPTIQYLGYG YYQ L+ + P NV+R VFFEG+PDPE+LKDWT MM+GIS WHRWR+G K K Sbjct: 53 HGAAAGPFGGQKTK---KQKPVVSLTSEELLDHLEEWNTDLAIFFYAPWCPYCKLVGPYWDMLGEWHLAQ--TTPSLLITRFDCEQDALAMDICMYMGVTQYPTIQYLGYGSYYQN---------LLSWLFRHPGSNVDRTVFFEGVPDPEILKDWTLMMKGISGWHRWREGXXKRTK 216
BLAST of NO10G00450 vs. NCBI_GenBank
Match: XP_005855328.1 (hypothetical protein NGA_0137200, partial [Nannochloropsis gaditana CCMP526] >EKU21033.1 hypothetical protein NGA_0137200, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 195.7 bits (496), Expect = 3.800e-46 Identity = 96/146 (65.75%), Postives = 106/146 (72.60%), Query Frame = 0 Query: 55 HGATTTTAAIPQTKTKRRQKPVVSLSSEELLDHLEGWTTDVAIFFYAPWCPYCKLVGPYWDMVGEWHAEQQPPTPSLLVARFDCEQDALATDICVYMGVTHYPTIQYLGYGPYYQQSIWSFLSNLLIYFRLSAPKVNVERAVFFEG 201 HGA +TK +QKPVVSL+SEELLDHLE W TD+AIFFYAPWCPYCKLVGPYWDM+GEWH Q TPSLL+ RFDCEQDALA DIC+YMGVT YPTIQYLGYG YYQ L+ + P NV+R VFFEG Sbjct: 53 HGAAAGPFGGQKTK---KQKPVVSLTSEELLDHLEEWNTDLAIFFYAPWCPYCKLVGPYWDMLGEWHLAQ--TTPSLLITRFDCEQDALAMDICMYMGVTQYPTIQYLGYGSYYQN---------LLSWLFRHPGSNVDRTVFFEG 184
BLAST of NO10G00450 vs. NCBI_GenBank
Match: CBJ26043.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 94.4 bits (233), Expect = 1.200e-15 Identity = 64/185 (34.59%), Postives = 93/185 (50.27%), Query Frame = 0 Query: 65 PQTKTKRRQKPVVSLSSEELLDHLEGWTTDVAIFFYAPWCPYCK-LVGPYWDMVGEWHAEQQP-PTPSLLVARFDCEQDALATDICVYMGVTHYPTIQYLGYGPYYQQSIWSFLSNLLIYFRLSAPKVNVERAVFFEG-IPDPEVLKDWTNMMRGISSWHRWRK-----GGRKGVKEGAVALEER 242 P + + +P+ L + L ++ WTTD A+ FYAPWC +CK L P W+ V AE+ P L++A+F+CEQD A C + + YPT + G G ++ LS +++ R P + A F G + EVL WT M IS ++R + GGR G K+ A A EER Sbjct: 36 PTSASTSLAEPLAPLDTATLTSNMRHWTTDYAVMFYAPWCQHCKELFMPLWEDVSMQMAEEDPRGKRKLVLAKFNCEQDTTAAAFCQEINLQFYPTFMFFGAGKFHDHDP---LSGMVLGPR---PTEHDSSAKFPAGAVVYHEVLAGWTKTMHFISGYNRVMERLNVFGGRGGRKDRA-ASEER 213
BLAST of NO10G00450 vs. NCBI_GenBank
Match: EJK51843.1 (hypothetical protein THAOC_28951 [Thalassiosira oceanica]) HSP 1 Score: 92.0 bits (227), Expect = 5.900e-15 Identity = 50/150 (33.33%), Postives = 76/150 (50.67%), Query Frame = 0 Query: 94 DVAIFFYAPWCPYCKLVGPYWDMVGEWHAEQQPPTPSLLVARFDCEQDALATDICVYMGVTHYPTIQYLGYGPYYQQSIWSFLSNLLIYFRLSAPKVN---VERAVFFEG-IPDPEVLKDWTNMMRGISSWHRWRKGG-RKGVKEGAVAL 239 D A+ FYA WC C + P WD + H + L++A FDCE+ A +C G+ YPT+ ++G G + FLS L+ SA + R V F+G P+ + DW N+MRG+SSWH + + G + ++ G + L Sbjct: 112 DAAVMFYAQWCQNCHALAPSWDAIAT-HLDAGSERSKLVMALFDCEKSTDAARLCAAAGIKAYPTMMFVGSGAVHDT---DFLSRSLLGADRSAGPFGSSPLRRTVKFQGNWQYPDAVMDWVNLMRGLSSWHVFTESGPLRSIRNGILGL 257
BLAST of NO10G00450 vs. NCBI_GenBank
Match: XP_002290241.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED91993.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 91.7 bits (226), Expect = 7.700e-15 Identity = 56/174 (32.18%), Postives = 83/174 (47.70%), Query Frame = 0 Query: 60 TTAAIPQTKTKRRQKPVVSLSSE---ELLDHLEGWTTDVAIFFYAPWCPYCKLVGPYWDMVGEWHAEQQPPTPSLLVARFDCEQDALATDICVYMGVTHYPTIQYLGYGPYYQQSIWSFLSNLLIYFRLSAP--KVNVERAVFFEG-IPDPEVLKDWTNMMRGISSWHRWRKGG 228 T +PQ + S S EL+D G D AI FYA WC C V P WD + H + L++A FDCE+D ++CV GV YPT+ ++G G Y+ + +++ + + P + R V F+G + + DW N+MRG+SSWH + G Sbjct: 67 TLKPLPQYPSHSSSSDATSSSQSGGAELVDEYIG--HDAAILFYAQWCNNCHAVAPSWDAIAT-HVNAGSRSSKLVMALFDCEKDTRHMELCVAAGVKAYPTMMFVGSGEYHDTDL--ITRSVVGKDKSAGPFGATTLRRTVKFQGNWQYGDQILDWVNIMRGLSSWHSMSESG 235
BLAST of NO10G00450 vs. NCBI_GenBank
Match: OEU20096.1 (hypothetical protein FRACYDRAFT_236164 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 88.2 bits (217), Expect = 8.500e-14 Identity = 51/148 (34.46%), Postives = 77/148 (52.03%), Query Frame = 0 Query: 85 LDHLEGWTTDVAIFFYAPWCPYCKLVGPYWDMVGEWHAEQQPPTPS-LLVARFDCEQDALATDICVYMGVTHYPTIQYLGYGPYYQQSIWSFLSNLLIYFRLSAPKVN---VERAVFFEG-IPDPEVLKDWTNMMRGISSWHRWRKGG 228 LD G+ D+A+ FYAPW Y + + PYW+ + H T S L++A FDCE +A ++C + VTHYPT+ ++G GP+Y ++ LL+ SA + V V F+G + + DW M+ +S WH W G Sbjct: 68 LDEYPGY--DLAVMFYAPWDSYSQRLAPYWNQIA--HILDAGTTQSKLIMALFDCELNAAHMELCKSIKVTHYPTLMFIGSGPFYDTDP---ITKLLLGKDKSAGVMGESPVPNTVKFQGNWQYTDSILDWIRTMQALSRWHTWSTKG 208
BLAST of NO10G00450 vs. NCBI_GenBank
Match: CEM20333.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 84.7 bits (208), Expect = 9.400e-13 Identity = 54/171 (31.58%), Postives = 80/171 (46.78%), Query Frame = 0 Query: 76 VVSLSSEELLDHLEGWTTDVAIFFYAPWCPYCKLVGPYWDMVGEWHAEQQPPTPSLLVARFDCEQDALATDICVYMGVTHYPTIQYLGYGPYYQQSIWSFLSNLLIYFRLSAPKVNVERAVFFEGIP-DPEVLKDWTNMMRGISSWHRWRK----------GGRKGVKEGA 236 VV LS EL H+E W+ D+ +FFYAPW CK + P + +G ++ E++ + VA+F+C ++C +G+ PT + G + S L L+ V RA F G P E L+DWT +MR +S RW + GGR + E A Sbjct: 26 VVDLSVAELRHHMEVWSEDLVVFFYAPWSSDCKRLAPLTESLGRFYVERR--VKDIRVAKFNCVASKTHRELCDGLGIQSLPTFLFFASGKMRSFNRTSTL--------LAERDVKHHRASKFRGDPYIYESLRDWTRIMRWLSLGQRWARYVKQTTSDVLGGRTLIAENA 186
BLAST of NO10G00450 vs. NCBI_GenBank
Match: XP_002183926.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC44595.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 73.9 bits (180), Expect = 1.700e-9 Identity = 44/137 (32.12%), Postives = 64/137 (46.72%), Query Frame = 0 Query: 94 DVAIFFYAPWCPYCKLVGPYWDMVGE-WHAEQQPPTPSLLVARFDCEQDALATDICVYMGVTHYPTIQYLGYGPYYQQSIWSFLSNLLIYFRLSAPKVNVERAV--FFEGIPDPEVLKDWTNMMRGISSWHR--WRK 226 DV + FYA WC C P +D + + HA + L++ FDCEQD + +C GVTHYPTI +L S ++ +PKV + + + F + + DW +RG+S WHR W K Sbjct: 98 DVVVLFYAQWCRNCHAFAPLYDQMSKLLHAGTK--DSQLVMGLFDCEQDKAHSRVCSDAGVTHYPTIMFLS------------SSGQVLQRGRRSPKVPLPKHITTFRGNWQYGDAVMDWIKTLRGLSHWHRAGWGK 220
BLAST of NO10G00450 vs. NCBI_GenBank
Match: GAX18283.1 (hypothetical protein FisN_20Lh048 [Fistulifera solaris]) HSP 1 Score: 65.9 bits (159), Expect = 4.500e-7 Identity = 37/138 (26.81%), Postives = 61/138 (44.20%), Query Frame = 0 Query: 94 DVAIFFYAPWCPYCKLVGPYWDMVGEWHAEQQPPTPSLLVARFDCEQDALATDICVYMGVTHYPTIQYLGYGPYYQQSIWSFLSNLLIYFRLSAPKVNVERAVFFEGIPDPEVLKDWTNMMRGISSWHR--WRKGGRK 230 DV + +YA WC C+ + P + + E + + ++++ FDCE D +C +G+THYPT+QY+ P ++ + K+ F E + DW M +S WHR W K R+ Sbjct: 56 DVVVLYYAQWCTNCRALSPIYIRIAELLKAGEAKS-NIIMGYFDCEADYEHAVLCEQVGITHYPTLQYISLAPDHR-------------LPHTQKKLPSHVTQFPGNWQVGESILDWIRTMSFLSQWHRASWGKALRQ 179
BLAST of NO10G00450 vs. NCBI_GenBank
Match: GAX23844.1 (hypothetical protein FisN_20Hh048 [Fistulifera solaris]) HSP 1 Score: 65.1 bits (157), Expect = 7.700e-7 Identity = 37/138 (26.81%), Postives = 61/138 (44.20%), Query Frame = 0 Query: 94 DVAIFFYAPWCPYCKLVGPYWDMVGEWHAEQQPPTPSLLVARFDCEQDALATDICVYMGVTHYPTIQYLGYGPYYQQSIWSFLSNLLIYFRLSAPKVNVERAVFFEGIPDPEVLKDWTNMMRGISSWHR--WRKGGRK 230 DV + +YA WC C+ + P + + E + + ++++ FDCE D +C +G+THYPT+QY+ P ++ + K+ F E + DW M +S WHR W K R+ Sbjct: 66 DVVVLYYAQWCQNCRSLSPMYIRIAEILKAGEAKS-NIIMGYFDCEADYEHAVLCEQVGITHYPTLQYISLAPDHR-------------LPHTQKKLPPHVTQFPGNWQVGESILDWIRTMSFLSQWHRASWGKALRQ 189 The following BLAST results are available for this feature:
BLAST of NO10G00450 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 10
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO10G00450 ID=NO10G00450|Name=NO10G00450|organism=Nannochloropsis oceanica|type=gene|length=1766bpback to top protein sequence of NO10G00450.1 >NO10G00450.1-protein ID=NO10G00450.1-protein|Name=NO10G00450.1|organism=Nannochloropsis oceanica|type=polypeptide|length=542bpback to top Synonyms
Publications
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