NO10G00370, NO10G00370 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO10G00370 vs. NCBI_GenBank
Match: EWM25268.1 (5-formyltetrahydrofolate cyclo-ligase [Nannochloropsis gaditana] >EWM25269.1 5-formyltetrahydrofolate cyclo-ligase [Nannochloropsis gaditana]) HSP 1 Score: 294.3 bits (752), Expect = 4.500e-76 Identity = 164/267 (61.42%), Postives = 191/267 (71.54%), Query Frame = 0 Query: 44 SLSSPSPRPRHYTQLRLHPRLFTSGIMA--SSANPXXXXXXXXXXSIKAEKAALRKCISARLRALDDTHVTAEAKRLFPRLLELEAVKRSECLSLYLSMPSKEVPTFPILL-TVLMEGGKQEGDASSTGGEARRKKKVYVPKVIGPASADMVMLPLSSPQDIASFPLSKWGIPEPVLPPSPLPSLPPLDLVIVPGVAFDANCNRLGHGKGYYDCFLSRLQASHAREGRQRPYTVGLALDEQIVESVPLDAFDLPIDAVVTPSKFFLR 308 SL P RP T PR ++ + + +SANP S+ +K LRK I+ARLRALDD++V AEA RLFPRLL LE K S C+SLYLSMP+KEVPTFP LL TV+ +G + EG A + VYVPKV GPA DMVMLPLSSP+D++SFP+SKWGIPEP LPPS PSLPPLDLV+VPGVAFD CNRLGHGKGYYD FLSRL ASHA GR RP T+GLAL+EQ+V SVP+D FDLP+DAVVTP K + R Sbjct: 52 SLVPPRERPSGSTCFSRFPRPPSTHLRSFMTSANP-----PNAGASLSEKKKNLRKSITARLRALDDSYVAAEASRLFPRLLALEDYKDSTCVSLYLSMPAKEVPTFPDLLKTVMTDGKRAEGTA----------RDVYVPKVTGPAPGDMVMLPLSSPKDVSSFPVSKWGIPEPPLPPSFSPSLPPLDLVLVPGVAFDNKCNRLGHGKGYYDSFLSRLFASHAAAGRARPMTIGLALEEQMVASVPVDTFDLPLDAVVTPDKVYFR 303
BLAST of NO10G00370 vs. NCBI_GenBank
Match: OQR96709.1 (5-formyltetrahydrofolate cyclo-ligase [Achlya hypogyna]) HSP 1 Score: 162.2 bits (409), Expect = 2.600e-36 Identity = 97/224 (43.30%), Postives = 130/224 (58.04%), Query Frame = 0 Query: 88 IKAEKAALRKCISARLRALDDTHVTAEAKRLFPRLLELEAVKRSECLSLYLSMPSKEVPTFPILLTVLMEGGKQEGDASSTGGEARRKKKVYVPKVIGPASADMVMLPLSSPQDIASFPLSKWGIPEPVLPPSPLPSLPP---------LDLVIVPGVAFDANCNRLGHGKGYYDCFLSRLQASHAREGRQRPYTVGLALDEQIVESVPLDAFDLPIDAVVTPS 303 ++++K ALRK + LRA+ + A++ L ++ L+A++ ++C+ +YLSM E T PIL + G KKVYVPKV G S DMVML + S ++ASFP SKWGIPE PP LP+ P +D+V+VPGVAFDA+ NRLGHGKGYYDCF R R G + P T+GLALD Q+V +VP D +D V TP+ Sbjct: 12 VRSQKKALRKQVEGALRAMTPGAIVAQSNALAQHIIALDAIRTAQCVCVYLSM-EHEARTAPILTQLFAAG-----------------KKVYVPKVTGMRSEDMVMLQVDSENEMASFPKSKWGIPE---PPELLPNGTPRINALDALDIDVVLVPGVAFDAHRNRLGHGKGYYDCFFQRYA---LRNGGELPATIGLALDVQMVPAVPTSDHDKVLDMVATPT 211
BLAST of NO10G00370 vs. NCBI_GenBank
Match: XP_012194074.1 (5-formyltetrahydrofolate cyclo-ligase [Saprolegnia parasitica CBS 223.65] >KDO35707.1 5-formyltetrahydrofolate cyclo-ligase [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 160.6 bits (405), Expect = 7.700e-36 Identity = 98/223 (43.95%), Postives = 133/223 (59.64%), Query Frame = 0 Query: 88 IKAEKAALRKCISARLRALDDTHVTAEAKRLFPRLLELEAVKRSECLSLYLSMPSKEVPTFPILLTVLMEGGKQEGDASSTGGEARRKKKVYVPKVIGPASADMVMLPLSSPQDIASFPLSKWGIPEPVLPPSPLPSLPP---------LDLVIVPGVAFDANCNRLGHGKGYYDCFLSRLQASHAREGRQRPYTVGLALDEQIVESVPLDAFDLPIDAVVTP 302 ++++KA LRK I+ LRAL V A+++ L ++ L+ + + +S+YL+M + E T ++ DA G K+VYVPKVIG S DMVML + S ++A+FP SKWGIPE PPS LPS P +D+V+VPGVAFD CNRLGHGKGYYDCFL R +R G + P T+G+AL+ QIV++VP D +D V TP Sbjct: 5 VRSQKAVLRKHIAGLLRALSRDEVVAQSEALAQHVVALDVFRHARSVSVYLAMEA-EAKTSTLV------------DALFAAG-----KRVYVPKVIGAKSEDMVMLRVDSATEMATFPKSKWGIPE---PPSSLPSGRPRIDALDALDVDIVLVPGVAFDPRCNRLGHGKGYYDCFLERYA---SRNGGKLPVTIGIALEAQIVDAVPTSGHDKMLDMVATP 203
BLAST of NO10G00370 vs. NCBI_GenBank
Match: CBJ30607.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 154.8 bits (390), Expect = 4.200e-34 Identity = 90/230 (39.13%), Postives = 133/230 (57.83%), Query Frame = 0 Query: 88 IKAEKAALRKCISARLRALDDTHV----TAEAKRL--FPRLLELEAVKRSECLSLYLSMPSKEVPTFPILLTVLMEGGKQEGDASSTGGEARRKKKVYVPKVIGPASADMVMLPLSSPQDIASFPLSKWGIPEP----VLPPSPLPSLPPLDLVIVPGVAFDANCNRLGHGKGYYDCFLSRLQASHAREGRQRPYTVGLALDEQIVESVPLDAFDLPIDAVVTPSKFFLR 308 ++ +K ALRK I + L+ + D V A A+RL FP+L + E +S+YLSMP K+ G ++ G +R KKVY+PKV+G ASADM M P+ S +++ASFPL+KW I EP V + + ++IVP VA D CNRLGHG+G+YDCF R+ + +GR P T+G+ DEQ+V+ +P ++ D+ +D V+TP++ F R Sbjct: 32 VREQKKALRKRIKSELKQMSDEAVGVASAAVAERLLSFPQLQQQEGGDGGGAVSVYLSMP------------------KELGTSAIVSGLFKRGKKVYIPKVLGAASADMRMFPVRSEEEVASFPLTKWKISEPSEELVFSREDGVTEGDISVIIVPAVALDPTCNRLGHGRGHYDCFFERVNKASMDKGRPPPVTIGVCFDEQVVDCIPTESTDVRLDFVLTPTRTFRR 243
BLAST of NO10G00370 vs. NCBI_GenBank
Match: XP_009844707.1 (5-formyltetrahydrofolate cyclo-ligase [Aphanomyces astaci] >ETV65844.1 5-formyltetrahydrofolate cyclo-ligase [Aphanomyces astaci]) HSP 1 Score: 153.7 bits (387), Expect = 9.400e-34 Identity = 95/220 (43.18%), Postives = 129/220 (58.64%), Query Frame = 0 Query: 88 IKAEKAALRKCISARLRALDDTHVTAEAKRLFPRLLELEAVKRSECLSLYLSMPSKEVPTFPILLTVLMEGGKQEGDASSTGGEARRKKKVYVPKVIGPASADMVMLPLSSPQDIASFPLSKWGIPEPVLP-PSPLP-----SLPPLDLVIVPGVAFDANCNRLGHGKGYYDCFLSRLQASHAREGRQRPYTVGLALDEQIVESVPLDAFDLPIDAVVTP 302 +KA K +RK I +LR V + + +L L++ A +++ + YL MP+ E T I+ + +G KK+YVPKV GP S DMVML ++S +DI +FP SKW IPEP+L P+ LP + LDL++VPGVAFDA+CNRLGHGKGYYDCF R AS R P T+G+AL EQ+++ VP A D +D +VTP Sbjct: 14 VKALKQVIRKDIDLKLRQYSADEVASASAQLTSHLVQHPAFVQAKSVCAYLPMPN-EASTAAIIHEIFAQG-----------------KKLYVPKVTGPRSEDMVMLHVTSQRDIDTFPKSKWNIPEPLLDHPNGLPRENALDVTDLDLILVPGVAFDAHCNRLGHGKGYYDCFFER-YASKCRGA--LPPTLGIALPEQVIDQVPTSAHDKALDGLVTP 212
BLAST of NO10G00370 vs. NCBI_GenBank
Match: GAX97584.1 (5-formyltetrahydrofolate cyclo-ligase [Pythium insidiosum]) HSP 1 Score: 149.4 bits (376), Expect = 1.800e-32 Identity = 92/225 (40.89%), Postives = 127/225 (56.44%), Query Frame = 0 Query: 90 AEKAALRKCISARLRALDDTHVTAEAKRLFPRLLELEAVKRSECLSLYLSMPSKEVPTFPILLTVLMEGGKQEGDASSTGGEARRKKKVYVPKVIGPASADMVMLPLSSPQDIASFPLSKWGIPEPVLP-------PSPLPSLPPLDLVIVPGVAFDANCNRLGHGKGYYDCFLSRLQASHAREGR-QRPYTVGLALDEQIVESVPLDAFDLPIDAVVTPSKFFL 307 A K A+R+ I+A LRA++DT +T +++ + R++ L + +R+ LS+YL MP KE T +L+ +G KKVYVPK+ G ++ DM ML +DI +FP KW IP+P L + SL LDLV++PGVAFD RLGHGKGYYD FL RL GR P VG+ L +Q+V++VPL D +D VVTP + L Sbjct: 8 AAKKAMRQSIAATLRAVEDTEITRQSEAIAARIVSLPSFQRARSLSVYLHMP-KEASTRALLVAAFKQG-----------------KKVYVPKITGKSAEDMAMLHAVDMEDIDAFPKDKWKIPDPPLTYASGEKRGDAMESL-DLDLVLMPGVAFDRRGGRLGHGKGYYDSFLRRLAERSEAAGRTSHPIKVGVCLTDQLVDAVPLSPHDRMLDVVVTPDEIIL 213
BLAST of NO10G00370 vs. NCBI_GenBank
Match: XP_008607165.1 (5-formyltetrahydrofolate cyclo-ligase [Saprolegnia diclina VS20] >EQC39104.1 5-formyltetrahydrofolate cyclo-ligase [Saprolegnia diclina VS20]) HSP 1 Score: 147.1 bits (370), Expect = 8.800e-32 Identity = 93/223 (41.70%), Postives = 127/223 (56.95%), Query Frame = 0 Query: 88 IKAEKAALRKCISARLRALDDTHVTAEAKRLFPRLLELEAVKRSECLSLYLSMPSKEVPTFPILLTVLMEGGKQEGDASSTGGEARRKKKVYVPKVIGPASADMVMLPLSSPQDIASFPLSKWGIPEPVLPPSPLPS---------LPPLDLVIVPGVAFDANCNRLGHGKGYYDCFLSRLQASHAREGRQRPYTVGLALDEQIVESVPLDAFDLPIDAVVTP 302 I+++K LRK I+ LR L V +++ L ++ L+ + + +S+YL+M + E T ++ DA G K +YVPKVIG S DMVML + S ++ +FP SKWGIPEP PPS LPS +D+V+VPGVAFD CNRLGHGKGYYDCF R +R G + P T+G+AL+ QIV++VP D +D V TP Sbjct: 5 IRSQKTVLRKRIAGLLRTLSRDEVVEQSEALTQHVVALDVFRDARSVSIYLAMEA-EAKTSTLV------------DALFAAG-----KTIYVPKVIGAKSEDMVMLRVDSTAEMTTFPKSKWGIPEP--PPS-LPSGLARIDALDALDVDIVLVPGVAFDHRCNRLGHGKGYYDCFFERYA---SRNGGKLPVTIGIALEAQIVDAVPTSGHDKVLDMVATP 203
BLAST of NO10G00370 vs. NCBI_GenBank
Match: CEM05089.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 146.7 bits (369), Expect = 1.100e-31 Identity = 86/221 (38.91%), Postives = 128/221 (57.92%), Query Frame = 0 Query: 87 SIKAEKAALRKCISARLRALDDTHVTAEAKRLFPRLLELEAVKRSECLSLYLSMPSKEVPTFPILLTVLMEGGKQEGDASSTGGEARRKKKVYVPKVIGPASADMVMLPLSSPQDIASFPLSKWGIPE----PVLPPSPLPSLPPLDLVIVPGVAFDANCNRLGHGKGYYDCFLSRLQASHAREGRQRPYTVGLALDEQI--VESVPLDAFDLPIDAVVTP 302 +I +K ALR+ + +L++L + ++ +F +L + RS+C+ +YLSMPS E+ T ++ +G K+V+VP+V+G DM M+ +SS +I+SFP+S WGIPE L +DLVI PGVAFD + RLGHGKGYYDCFL+RL AS GR R T+G+ L EQ+ + ++P+D+ D+ +D VVTP Sbjct: 28 AISEQKKALRRQVRGQLKSLSHESIEPQSAAVFAQLSQHPTFVRSQCVCVYLSMPSGEIDTHTLVREAFRQG-----------------KRVFVPRVVGKNPPDMRMVEVSSVDEISSFPMSPWGIPELSLDETLRREDGTYCGDIDLVICPGVAFDQSGRRLGHGKGYYDCFLARLFASLKDRGRPRTTTIGIGLREQLLPLATIPMDSLDMFLDWVVTP 231
BLAST of NO10G00370 vs. NCBI_GenBank
Match: ETI43221.1 (5-formyltetrahydrofolate cyclo-ligase [Phytophthora parasitica P1569] >ETM43152.1 5-formyltetrahydrofolate cyclo-ligase [Phytophthora parasitica] >ETO71875.1 5-formyltetrahydrofolate cyclo-ligase [Phytophthora parasitica P1976] >ETP41092.1 5-formyltetrahydrofolate cyclo-ligase [Phytophthora parasitica P10297]) HSP 1 Score: 141.4 bits (355), Expect = 4.800e-30 Identity = 89/218 (40.83%), Postives = 121/218 (55.50%), Query Frame = 0 Query: 92 KAALRKCISARLRALDDTHVTAEAKRLFPRLLELEAVKRSECLSLYLSMPSKEVPTFPILLTVLMEGGKQEGDASSTGGEARRKKKVYVPKVIGPASADMVMLPLSSPQDIASFPLSKWGIPEPVL------PPSPLPSLPPLDLVIVPGVAFDANCNRLGHGKGYYDCFLSRLQASHAREGRQRPYTVGLALDEQIVESVPLDAFDLPIDAVVTPSK 304 K LR+ I A L+AL D+ VT +++ L ++ L R+ +S+YL MP KE T +L +A+ GG KKV+VPK+ G ++ D++ML +S DI FP KW IP+P L P L+LV++PGVAFD RLGHGKGYYD FL RL + G P T+GL L Q++E VPL A D +D VVTP++ Sbjct: 21 KKELRRRIGATLKALPDSEVTEQSRLLAEKICALPEFARARGISVYLEMP-KEAATSKLL------------EAAFAGG-----KKVFVPKITGRSAEDLMMLQATSMDDIRCFPKDKWQIPDPPLLSDTGTPRDDAVQGDELELVLLPGVAFDRQGGRLGHGKGYYDSFLRRLTERYNAIGHPPPTTIGLCLTPQLIEQVPLAAHDKMLDLVVTPTE 220
BLAST of NO10G00370 vs. NCBI_GenBank
Match: XP_008912172.1 (5-formyltetrahydrofolate cyclo-ligase [Phytophthora parasitica INRA-310] >ETK83277.1 5-formyltetrahydrofolate cyclo-ligase [Phytophthora parasitica] >ETL36678.1 5-formyltetrahydrofolate cyclo-ligase [Phytophthora parasitica] >ETN02438.1 5-formyltetrahydrofolate cyclo-ligase [Phytophthora parasitica INRA-310] >ETP12989.1 5-formyltetrahydrofolate cyclo-ligase [Phytophthora parasitica CJ01A1]) HSP 1 Score: 141.4 bits (355), Expect = 4.800e-30 Identity = 89/218 (40.83%), Postives = 121/218 (55.50%), Query Frame = 0 Query: 92 KAALRKCISARLRALDDTHVTAEAKRLFPRLLELEAVKRSECLSLYLSMPSKEVPTFPILLTVLMEGGKQEGDASSTGGEARRKKKVYVPKVIGPASADMVMLPLSSPQDIASFPLSKWGIPEPVL------PPSPLPSLPPLDLVIVPGVAFDANCNRLGHGKGYYDCFLSRLQASHAREGRQRPYTVGLALDEQIVESVPLDAFDLPIDAVVTPSK 304 K LR+ I A L+AL D+ VT +++ L ++ L R+ +S+YL MP KE T +L +A+ GG KKV+VPK+ G ++ D++ML +S DI FP KW IP+P L P L+LV++PGVAFD RLGHGKGYYD FL RL + G P T+GL L Q++E VPL A D +D VVTP++ Sbjct: 21 KKELRRRIGATLKALPDSEVTEQSRLLAEKICALPEFARARGISVYLEMP-KEAATSKLL------------EAAFAGG-----KKVFVPKITGRSAEDLMMLQATSMDDIRCFPKDKWQIPDPPLLSDTGTPRDDAVQGDELELVLLPGVAFDRQGGRLGHGKGYYDSFLRRLTEHYNAIGHPPPTTIGLCLTPQLIEQVPLAAHDKMLDLVVTPTE 220 The following BLAST results are available for this feature:
BLAST of NO10G00370 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO10G00370 ID=NO10G00370|Name=NO10G00370|organism=Nannochloropsis oceanica|type=gene|length=4545bpback to top protein sequence of NO10G00370.1 >NO10G00370.1-protein ID=NO10G00370.1-protein|Name=NO10G00370.1|organism=Nannochloropsis oceanica|type=polypeptide|length=308bpback to top Synonyms
Publications
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