NO10G00340, NO10G00340 (gene) Nannochloropsis oceanica

Overview
NameNO10G00340
Unique NameNO10G00340
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2787
Alignment locationchr10:117040..119826 -

Link to JBrowse

Properties
Property NameValue
DescriptionSuppressor protein of bem1/bed5 double mutants
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:117040..119826 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0005524ATP binding
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR036181MIT_dom_sf
IPR027417P-loop_NTPase
IPR015415Vps4_C
IPR003959ATPase_AAA_core
IPR003593AAA+_ATPase
IPR007330MIT
Homology
BLAST of NO10G00340 vs. NCBI_GenBank
Match: CBJ26156.1 (putative; katanin like protein [Ectocarpus siliculosus])

HSP 1 Score: 501.1 bits (1289), Expect = 3.300e-138
Identity = 272/454 (59.91%), Postives = 320/454 (70.48%), Query Frame = 0
Query:    3 NNTFISQAIDIVKQAIEADTKGEYENALGLYKKSLDYFMAGLKYEKNPQTKATISARVEGRRGGGTATRNPGED----------------------------XXXXXXXXXKLKGALSSSIVTEKPNVKWDDVAGLDLAKEALKEAVILPVKFPQLFVGKRKPWRGILLYGPPGTGKSYLAKAVATEADCKFFSVSSSDLVSKWQGESERLVRSLFEMAREEGRAIIFIDEVDSLCGQRSEGEADSVRRIKTEFLVQMDGVGKADPTKQVLILGATNIPWELDPAIRRRFEKRVYIPLPEASARAIMFKINLGDTPNSLTDEEFAQLADMTEGCSGADISICVREALMEPLRKCKQAKYFTPNADGMLTPYHSG----------TGEDPNAGTLTCGSCNAVRGGLYEIEAEKLLVPDIEFADFEKAAKRAKSSVAPEELDHFTEWTNEFGQEG 419
            ++ FI +AID+VK AI AD   +YE ALGLYKKSL+YFM GLKYE NP  KATI  RVEG        +   ++                            XXXXXXXXX  +GAL+ +IV+EKPNVKW DVAGL+ AK  LKEAVILP KFPQLF GKR+PW+GILLYGPPGTGKSYLAKAVATE+D  FF+VSSSDLVSKWQGESE+LVR+LFE+ARE  R+IIFIDEVDS+CG RSEGE DS RRIKTEFLVQM GVG       +L+LGATN+PWELDPA+RRRFEKR+YIPLPE  AR+IMFK++LGDT N+LTD+ F  L D  +GCSG+DIS+  REALMEPLRKC+ AK F P  D ML P              T      G + C +C A+R  LYE+  EKLLVPD+ + DF KA  ++ SSV+ EEL  F +WT +FGQEG
Sbjct:    2 DSQFIPKAIDMVKDAIAADNNQDYETALGLYKKSLEYFMTGLKYEPNPMAKATIMKRVEGYMKRAEILKEIVDEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGALAGAIVSEKPNVKWSDVAGLEQAKSTLKEAVILPAKFPQLFTGKRRPWKGILLYGPPGTGKSYLAKAVATESDAVFFAVSSSDLVSKWQGESEKLVRNLFELAREHERSIIFIDEVDSMCGSRSEGENDSARRIKTEFLVQMQGVGNTH--DGILVLGATNVPWELDPAMRRRFEKRIYIPLPEPEARSIMFKLHLGDTANTLTDQNFDALGDEAKGCSGSDISVITREALMEPLRKCQMAKQFVPTKDNMLIPAEKYPNCPYCPQDLTTRPAKLGEV-CPTCKAIRTSLYEVATEKLLVPDVCYDDFLKALTKSGSSVSEEELTRFVQWTEDFGQEG 452          
BLAST of NO10G00340 vs. NCBI_GenBank
Match: XP_008608588.1 (hypothetical protein SDRG_04687 [Saprolegnia diclina VS20] >EQC38261.1 hypothetical protein SDRG_04687 [Saprolegnia diclina VS20])

HSP 1 Score: 489.6 bits (1259), Expect = 9.800e-135
Identity = 264/461 (57.27%), Postives = 317/461 (68.76%), Query Frame = 0
Query:    3 NNTFISQAIDIVKQAIEADTKGEYENALGLYKKSLDYFMAGLKYEKNPQTKATISARVEGRR--------------------GGGTATRNPGEDXXXXXXXXXKLKGALSSSIVTEKPNVKWDDVAGLDLAKEALKEAVILPVKFPQLFVGKRKPWRGILLYGPPGTGKSYLAKAVATEADCKFFSVSSSDLVSKWQGESERLVRSLFEMAREEGRAIIFIDEVDSLCGQRSEGEADSVRRIKTEFLVQMDGVGKADPTKQVLILGATNIPWELDPAIRRRFEKRVYIPLPEASARAIMFKINLGDTPNSLTDEEFAQLADMTEGCSGADISICVREALMEPLRKCKQAKYFT-------PNADG-MLTPYH------------SGTGEDPNAGTLTCGSCNAVRGGLYEI-----EAEKLLVPDIEFADFEKAAKRAKSSVAPEELDHFTEWTNEFGQEG 419
            +N FI QAI +V QAI+ DT   YE A  LYK+SL++FM G+KYEKNP +K  I  RVEG                       GG A +   +D         KL+GAL+S++V+EKPNVKWDDVAGL+ AKEALKEAVILP +FPQLF GKR+PW+GILLYGPPGTGKSYLAKAVATEAD  FFSVSSSDLVSKWQGESERLV++LFEMARE+  +IIFIDE+DSLC  RSEGE+DS RRIKTEFLVQM GVG +     +L+LGATN+PWELDPA+RRRFEKR+YIPLPE  AR +M KI+LGDTPN+L+D++F  LA   EG SG+DIS+ VREALMEPLR C+QA++F        PN +G  LTP              S  G         CG C A R  LY++       ++L  P +   DF+K  + + SSVAPEEL+ F +WT EFGQEG
Sbjct:    2 DNKFIPQAIALVTQAIQEDTNKNYEAAFKLYKQSLEHFMIGVKYEKNPTSKEIIMKRVEGYMSRAEQLREMLEGASKPKVVPAGGVAEKEK-DDEENEDAEKNKLRGALASAVVSEKPNVKWDDVAGLEAAKEALKEAVILPARFPQLFTGKRRPWKGILLYGPPGTGKSYLAKAVATEADSTFFSVSSSDLVSKWQGESERLVKNLFEMAREKKPSIIFIDEIDSLCSNRSEGESDSTRRIKTEFLVQMQGVGHSH--DGILVLGATNVPWELDPAMRRRFEKRIYIPLPEVEARKVMLKIHLGDTPNTLSDDDFTYLASQAEGTSGSDISVLVREALMEPLRLCQQAQFFMRCDDKCHPNRNGAFLTPCPDDPPCPYCHMKLSSCGSACQGCKTPCGRCGAYRMRLYDLPERGFRDDQLKPPMVSMRDFKKVLEHSISSVAPEELNQFVKWTTEFGQEG 459          
BLAST of NO10G00340 vs. NCBI_GenBank
Match: GAY00686.1 (vacuolar protein sortingassociating protein putative [Pythium insidiosum])

HSP 1 Score: 489.6 bits (1259), Expect = 9.800e-135
Identity = 262/463 (56.59%), Postives = 319/463 (68.90%), Query Frame = 0
Query:    4 NTFISQAIDIVKQAIEADTKGEYENALGLYKKSLDYFMAGLKYEKNPQTKATISARVEGR------------------RGGGTATRNPGE--DXXXXXXXXXKLKGALSSSIVTEKPNVKWDDVAGLDLAKEALKEAVILPVKFPQLFVGKRKPWRGILLYGPPGTGKSYLAKAVATEADCKFFSVSSSDLVSKWQGESERLVRSLFEMAREEGRAIIFIDEVDSLCGQRSEGEADSVRRIKTEFLVQMDGVGKADPTKQVLILGATNIPWELDPAIRRRFEKRVYIPLPEASARAIMFKINLGDTPNSLTDEEFAQLADMTEGCSGADISICVREALMEPLRKCKQAKYF-------TPNADGMLTPYHSGTGEDPNAG----------------TLTCGSCNAVRGGLYEIEA-----EKLLVPDIEFADFEKAAKRAKSSVAPEELDHFTEWTNEFGQEG 419
            N FI QAI+IV  AI+ D K  YE ALGLYKK+L++FM G+KYEKNP +K  I  RVEG                      GTA    G+  D         KL+G+L+SS+V EKPNVKWDDVAGLD AKEALKEAVILP +FPQLF GKR+PW+GILLYGPPGTGKSYLAKAVATEAD  FF+VSSS LVSKWQGESE+LV++LF+MARE+  +IIFIDE+DSL   R+EGE+DS RRIKTEFLVQM GVG +D    +L+LGATN+PWELDPA+RRRFEKR+YIPLPE  AR +M KI+LGDTPN LT+++F  +A+ TEGCSG+DIS+ VREALMEPLRKC+Q+ +F        P ++G    Y +   +DP                      C  C A+R  LY++ +     +KL  P +   DF+K  + + SSVAPEELD F +WT EFGQEG
Sbjct:    3 NKFIPQAIEIVTLAIQEDNKKNYEEALGLYKKALEHFMIGVKYEKNPTSKDIIMKRVEGYMTRAEQLRAMLEKTPKAVTASGTAELEKGDKSDDDETDVETAKLRGSLASSVVGEKPNVKWDDVAGLDAAKEALKEAVILPARFPQLFTGKRRPWKGILLYGPPGTGKSYLAKAVATEADSTFFAVSSSTLVSKWQGESEKLVKNLFDMAREKKPSIIFIDEIDSLTSNRTEGESDSTRRIKTEFLVQMQGVGNSD--DGILVLGATNVPWELDPAMRRRFEKRIYIPLPELEARKVMLKIHLGDTPNGLTEQDFNTVAEKTEGCSGSDISVLVREALMEPLRKCQQSNFFIRCDDKANPKSNG---EYLTPCDDDPPCAYCHMKLSSCPRNCKDCLAPCRRCGALRMRLYDLPSRGFSDDKLRPPVVSMNDFKKVMEHSVSSVAPEELDRFVKWTTEFGQEG 460          
BLAST of NO10G00340 vs. NCBI_GenBank
Match: XP_012205223.1 (hypothetical protein SPRG_10874 [Saprolegnia parasitica CBS 223.65] >KDO24087.1 hypothetical protein SPRG_10874 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 488.4 bits (1256), Expect = 2.200e-134
Identity = 263/461 (57.05%), Postives = 317/461 (68.76%), Query Frame = 0
Query:    3 NNTFISQAIDIVKQAIEADTKGEYENALGLYKKSLDYFMAGLKYEKNPQTKATISARVEGRR--------------------GGGTATRNPGEDXXXXXXXXXKLKGALSSSIVTEKPNVKWDDVAGLDLAKEALKEAVILPVKFPQLFVGKRKPWRGILLYGPPGTGKSYLAKAVATEADCKFFSVSSSDLVSKWQGESERLVRSLFEMAREEGRAIIFIDEVDSLCGQRSEGEADSVRRIKTEFLVQMDGVGKADPTKQVLILGATNIPWELDPAIRRRFEKRVYIPLPEASARAIMFKINLGDTPNSLTDEEFAQLADMTEGCSGADISICVREALMEPLRKCKQAKYFT-------PNADG-MLTPYH------------SGTGEDPNAGTLTCGSCNAVRGGLYEI-----EAEKLLVPDIEFADFEKAAKRAKSSVAPEELDHFTEWTNEFGQEG 419
            +N FI QAI +V QAI+ DT   YE A  LYK+SL++FM G+KYEKNP +K  I  RVEG                       GG A +   +D         KL+GAL+S++V+EKPNVKWDDVAGL+ AKEALKEAVILP +FPQLF GKR+PW+GILLYGPPGTGKSYLAKAVATEAD  FFSVSSSDLVSKWQGESERLV++LFEMARE+  +IIFIDE+DSLC  RSEGE+DS RRIKTEFLVQM GVG +     +L+LGATN+PWELDPA+RRRFEKR+YIPLPE  AR +M KI+LGDTPN+L+D++F  LA   EG SG+DIS+ VREALMEPLR C+QA++F        PN +G  LTP              S  G         CG C A R  LY++       ++L  P +   DF+K  + + +SVAPEEL+ F +WT EFGQEG
Sbjct:    2 DNKFIPQAIALVTQAIQEDTNKNYEAAFKLYKQSLEHFMIGVKYEKNPTSKEIIMKRVEGYMSRAEQLREMLEGASKPKVVPAGGVAEKEK-DDEENEDAEKNKLRGALASAVVSEKPNVKWDDVAGLEAAKEALKEAVILPARFPQLFTGKRRPWKGILLYGPPGTGKSYLAKAVATEADSTFFSVSSSDLVSKWQGESERLVKNLFEMAREKKPSIIFIDEIDSLCSNRSEGESDSTRRIKTEFLVQMQGVGHSH--DGILVLGATNVPWELDPAMRRRFEKRIYIPLPEVEARKVMLKIHLGDTPNTLSDDDFTYLASQAEGTSGSDISVLVREALMEPLRLCQQAQFFMRCDEKCHPNRNGAFLTPCPDDPPCPYCHMKLSSCGSACQGCKTPCGRCGAYRMRLYDLPERGFRDDQLKPPMVSMRDFKKVLEHSITSVAPEELNQFVKWTTEFGQEG 459          
BLAST of NO10G00340 vs. NCBI_GenBank
Match: OQR86899.1 (vacuolar protein sorting-associating protein [Achlya hypogyna])

HSP 1 Score: 488.4 bits (1256), Expect = 2.200e-134
Identity = 264/461 (57.27%), Postives = 316/461 (68.55%), Query Frame = 0
Query:    3 NNTFISQAIDIVKQAIEADTKGEYENALGLYKKSLDYFMAGLKYEKNPQTKATISARVEGR--------------------RGGGTATRNPGEDXXXXXXXXXKLKGALSSSIVTEKPNVKWDDVAGLDLAKEALKEAVILPVKFPQLFVGKRKPWRGILLYGPPGTGKSYLAKAVATEADCKFFSVSSSDLVSKWQGESERLVRSLFEMAREEGRAIIFIDEVDSLCGQRSEGEADSVRRIKTEFLVQMDGVGKADPTKQVLILGATNIPWELDPAIRRRFEKRVYIPLPEASARAIMFKINLGDTPNSLTDEEFAQLADMTEGCSGADISICVREALMEPLRKCKQAKYF----------------TPNADGMLTPY----HSGTGEDPNAGTLTCGSCNAVRGGLYEI-----EAEKLLVPDIEFADFEKAAKRAKSSVAPEELDHFTEWTNEFGQEG 419
            +N FI QAI +V QAI+ DT   YE A  LYK+SL++FM G+KYEKNP +K  I  RVEG                       GG A ++  +D         KL+GAL+S++V+EKPNVKWDDVAGL+ AKEALKEAVILP +FPQLF GKR+PW+GILLYGPPGTGKSYLAKAVATEAD  FFSVSSSDLVSKWQGESERLV++LFEMARE+  +IIFIDE+DSLC  RSEGE+DS RRIKTEFLVQM GVG +     +L+LGATN+PWELDPA+RRRFEKR+YIPLPE  AR +M KI+LGDTP+SLTD +F  LA   EG SG+DIS+ VREALMEPLR C+QA++F                TP AD    PY     S  G         C  C A R  LY++       ++L  P +   DF+K  + + SSVAPEEL+ F +WT+EFGQEG
Sbjct:    2 DNKFIPQAIALVTQAIQEDTNKNYEAAFKLYKQSLEHFMIGVKYEKNPTSKEIIMKRVEGYMSRAEQLREMLEGAARPKVVAAGGVAEKDK-DDEESEDTEKSKLRGALASAVVSEKPNVKWDDVAGLEAAKEALKEAVILPARFPQLFTGKRRPWKGILLYGPPGTGKSYLAKAVATEADSTFFSVSSSDLVSKWQGESERLVKNLFEMAREKKPSIIFIDEIDSLCSNRSEGESDSTRRIKTEFLVQMQGVGHSH--DGILVLGATNVPWELDPAMRRRFEKRIYIPLPEVEARKVMLKIHLGDTPHSLTDTDFTYLATQAEGTSGSDISVLVREALMEPLRLCQQAQFFMRCDDKCHPNRNGAFLTPCADDPPCPYCHMKLSSCGSACQGCKAPCARCGAYRMRLYDLPERGFRDDQLKPPMVSMRDFKKVLEHSISSVAPEELNQFIKWTSEFGQEG 459          
BLAST of NO10G00340 vs. NCBI_GenBank
Match: XP_009830643.1 (hypothetical protein H257_06949 [Aphanomyces astaci] >ETV79707.1 hypothetical protein H257_06949 [Aphanomyces astaci])

HSP 1 Score: 485.3 bits (1248), Expect = 1.900e-133
Identity = 261/464 (56.25%), Postives = 321/464 (69.18%), Query Frame = 0
Query:    3 NNTFISQAIDIVKQAIEADTKGEYENALGLYKKSLDYFMAGLKYEKNPQTKATISARVEGR--------------------RGGGTATRNPGEDXXXXXXXXXKLKGALSSSIVTEKPNVKWDDVAGLDLAKEALKEAVILPVKFPQLFVGKRKPWRGILLYGPPGTGKSYLAKAVATEADCKFFSVSSSDLVSKWQGESERLVRSLFEMAREEGRAIIFIDEVDSLCGQRSEGEADSVRRIKTEFLVQMDGVGKADPTKQVLILGATNIPWELDPAIRRRFEKRVYIPLPEASARAIMFKINLGDTPNSLTDEEFAQLADMTEGCSGADISICVREALMEPLRKCKQAKYF-------TPNADGMLTPYHSGTGEDP---------NAGTLTCGSCNA-------VRGGLYEI-----EAEKLLVPDIEFADFEKAAKRAKSSVAPEELDHFTEWTNEFGQEG 419
            +N FI QAI +V QAI+ DT   YE A  LY++SL++FM G+KYEKNP +KA I  RVEG                       GGTA +   ++         KL+GAL+S++V+EKPNVKWDDVAGL+ AKEALKEAVILP +FPQLF GKR+PW+GILLYGPPGTGKSYLAKAVATEAD  FFSVSSSDLVSKWQGESERLV++LFEMARE+  +IIFIDE+DSLC  RSEGE+DS RRIKTEFLVQM GVG +     +L+LGATN+PWELDPA+RRRFEKR+YIPLPE  AR +M KI+LGDTP+SL D +F  LA   EGCSG+DIS+ VREALMEPLR+C+QA++F        P  +G   P+ +   +DP         ++   TC  C A        R  LY++     + ++L  P +   +F K  + + SSVAPEEL+ F +WT EFGQEG
Sbjct:   15 DNKFIPQAIQLVTQAIQEDTNKNYEAAFKLYQQSLEHFMIGVKYEKNPTSKAIIMKRVEGYMTRAEQLRELLEGQAKPKVVAAGGTAEKEKDDEETDGDAEKNKLRGALASAVVSEKPNVKWDDVAGLEAAKEALKEAVILPARFPQLFTGKRRPWKGILLYGPPGTGKSYLAKAVATEADSTFFSVSSSDLVSKWQGESERLVKNLFEMAREKKPSIIFIDEIDSLCSNRSEGESDSTRRIKTEFLVQMQGVGHSH--DGILVLGATNVPWELDPAMRRRFEKRIYIPLPEVHARKVMLKIHLGDTPHSLNDADFTTLAAKAEGCSGSDISVLVREALMEPLRQCQQAQFFYRCDEKAHPAKNG---PFLTPCEDDPPCPHCHMKLSSCAPTCAGCKAPCPRCGSYRMRLYDLPDRGFKDDQLKPPMVSMTNFNKVLEHSISSVAPEELNQFIKWTTEFGQEG 473          
BLAST of NO10G00340 vs. NCBI_GenBank
Match: XP_008875388.1 (hypothetical protein H310_10718 [Aphanomyces invadans] >ETV96077.1 hypothetical protein H310_10718 [Aphanomyces invadans])

HSP 1 Score: 482.6 bits (1241), Expect = 1.200e-132
Identity = 270/462 (58.44%), Postives = 322/462 (69.70%), Query Frame = 0
Query:    3 NNTFISQAIDIVKQAIEADTKGEYENALGLYKKSLDYFMAGLKYEKNPQTKATISARVEGR--------------------RGGGTATRNPGEDXXXXXXXXXKLKGALSSSIVTEKPNVKWDDVAGLDLAKEALKEAVILPVKFPQLFVGKRKPWRGILLYGPPGTGKSYLAKAVATEADCKFFSVSSSDLVSKWQGESERLVRSLFEMAREEGRAIIFIDEVDSLCGQRSEGEADSVRRIKTEFLVQMDGVGKADPTKQVLILGATNIPWELDPAIRRRFEKRVYIPLPEASARAIMFKINLGDTPNSLTDEEFAQLADMTEGCSGADISICVREALMEPLRKCKQAKYFTPNADGMLTPYHSGT-----GEDPN---------------AGTLT-CGSCNAVRGGLYEI-----EAEKLLVPDIEFADFEKAAKRAKSSVAPEELDHFTEWTNEFGQEG 419
            +N FI QAI +V QAI+ DT   YE A  LYK+SL++FM G+KYEKNP +K  I  RVEG                       GGTA       XXXXXXXXX L+GAL+S++V+EKPNVKWDDVAGL+ AKEALKEAVILP +FPQLF GKR+PW+GILLYGPPGTGKSYLAKAVATEAD  FFSVSSSDLVSKWQGESERLV++LFEMARE+  +IIFIDE+DSLC  RSEGE+DS RRIKTEFLVQM GVG +     +L+LGATN+PWELDPA+RRRFEKR+YIPLPE  AR +M KI+LGDTP+SL D++F  LA   EGCSG+DIS+ VREALMEPLR+C+QA++F    D    P  +GT      +DP                 G  T C  C + R  LY++        +L  P +   +F K  + + SSVAPEEL  F +WT+EFGQEG
Sbjct:    2 DNKFIPQAIQLVTQAIQEDTNKNYEAAFKLYKQSLEHFMIGVKYEKNPTSKEIIMKRVEGYMTRAEQLREMLEGQAKPKVVAAGGTAXXXXXXXXXXXXXXXXXLRGALASAVVSEKPNVKWDDVAGLEAAKEALKEAVILPARFPQLFTGKRRPWKGILLYGPPGTGKSYLAKAVATEADSTFFSVSSSDLVSKWQGESERLVKNLFEMAREKKPSIIFIDEIDSLCSNRSEGESDSTRRIKTEFLVQMQGVGHSH--DGILVLGATNVPWELDPAMRRRFEKRIYIPLPEVEARKVMLKIHLGDTPHSLNDDDFTTLATKAEGCSGSDISVLVREALMEPLRQCQQAQFFC-RCDDKARPTRNGTFLTPCEDDPPCPHCHMKLSSCPSNCTGCKTPCQRCGSYRMRLYDLPDRGFNDSQLKPPMVSMTNFNKVLEHSISSVAPEELHQFVKWTSEFGQEG 460          
BLAST of NO10G00340 vs. NCBI_GenBank
Match: OEU16770.1 (AAA-domain-containing protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 480.3 bits (1235), Expect = 6.000e-132
Identity = 263/446 (58.97%), Postives = 318/446 (71.30%), Query Frame = 0
Query:    4 NTFISQAIDIVKQAIEADTKGEYENALGLYKKSLDYFMAGLKYEKNPQTKATISARVEGRRGGGTATRN--------------------PGEDXXXXXXXXXKLKGALSSSIVTEKPNVKWDDVAGLDLAKEALKEAVILPVKFPQLFVGKRKPWRGILLYGPPGTGKSYLAKAVATEADCKFFSVSSSDLVSKWQGESERLVRSLFEMAR--EEGRAIIFIDEVDSLCGQRSEGEADSVRRIKTEFLVQMDGVGKADPTKQVLILGATNIPWELDPAIRRRFEKRVYIPLPEASARAIMFKINLGDTPNSLTDEEFAQLADMTEGCSGADISICVREALMEPLRKCKQAKYFTPNADGMLTP---YHSGT------GEDPNAGTLTCGSCNAVRGGLYEIEAEKLLVPDIEFADFEKAAKRAKSSVAPEELDHFTEWTNEFGQEG 419
            N+FI QAIDIV +AIEAD +GEYE ALGLY+ +L  F  GLKYEKN   K  +  RVEG        R+                        XXXXXX   KL+GAL+S+IV+ KPN+KW+DV GL+ AK++LKE VILP +FPQLF GKRKP++GILL+GPPGTGKSYLAKAVATEAD  FFSVSS+DL+SKWQGESE++VR+LFEMAR  EEGRAIIFIDEVDSLCG RSEGE+DS+RR+KTEFLVQMDGVG      Q+L+LGATNIPWELD AIRRRFEKRVYIPLP+A +R+ M K+NLGDTPN LT+ +F +  ++TEG SGADI I V+EALM+PLR+C++AK F  + DG   P   Y S +        D      TC  C AVR  L++I  EKL  P + + DF+   K + SSV+P+EL  F EWT  FGQ+G
Sbjct:    3 NSFIPQAIDIVGKAIEADNEGEYEKALGLYRDALGRFTMGLKYEKNEARKKLVLERVEGYMKRAEELRDYVAKQNELEKNXXXXXXXXXXXXXXXXXXXEKTKLRGALASAIVSTKPNIKWEDVIGLENAKDSLKETVILPTRFPQLFTGKRKPFKGILLFGPPGTGKSYLAKAVATEADSTFFSVSSADLISKWQGESEKMVRNLFEMARESEEGRAIIFIDEVDSLCGSRSEGESDSMRRVKTEFLVQMDGVGNTG--GQLLVLGATNIPWELDAAIRRRFEKRVYIPLPDAESRSAMVKLNLGDTPNELTEADFDRTGEITEGSSGADIKILVQEALMQPLRRCQKAKQFVIDKDGWYIPSEKYPSCSSCPPKLSSDKKGTDYTCKRCGAVRMSLWDIPPEKLQAPMVLYDDFKTVMKSSVSSVSPDELKRFEEWTKLFGQDG 446          
BLAST of NO10G00340 vs. NCBI_GenBank
Match: XP_009032318.1 (hypothetical protein AURANDRAFT_18406 [Aureococcus anophagefferens] >EGB12660.1 hypothetical protein AURANDRAFT_18406 [Aureococcus anophagefferens])

HSP 1 Score: 478.8 bits (1231), Expect = 1.700e-131
Identity = 251/439 (57.18%), Postives = 302/439 (68.79%), Query Frame = 0
Query:    1 MANNTFISQAIDIVKQAIEADTKGEYENALGLYKKSLDYFMAGLKYEKNPQTKATISARVEG---------------------RRGGGTATRNPGEDXXXXXXXXXKLKGALSSSIVTEKPNVKWDDVAGLDLAKEALKEAVILPVKFPQLFVGKRKPWRGILLYGPPGTGKSYLAKAVATEADCKFFSVSSSDLVSKWQGESERLVRSLFEMAREEGRAIIFIDEVDSLCGQRSEGEADSVRRIKTEFLVQMDGVGKADPTKQVLILGATNIPWELDPAIRRRFEKRVYIPLPEASARAIMFKINLGDTPNSLTDEEFAQLADMTEGCSGADISICVREALMEPLRKCKQAKYFTPNADGMLTPYHSGTGEDPNAGTLTCGSCNAVRGGLYEIEAEKLLVPDIEFADFEKAAKRAKSSVAPEELDHFTEWTNEFGQEG 419
            M    FI Q I++V +AI+AD   +YE AL LYK++L+ FM G+KYEKNP  +ATI  RV+G                      +G          D         KLKG L+S+IVTEKPNV W DVAGL+ AK+ALKEAVILP KFPQLFVGKR+PWRGILLYGPPGTGKS+LAKAVATEAD +FF+VSSSDLVSKWQGESERLV++LFEMAR E  AIIFIDE+DS+CG RSEGE+D+ RRIKTEFLVQM GV  +     +L+LGATN PWELDPAIRRRFEKR+YIPLPEA+ARA M +++LGDTP++L   +F  LA   +G SG+D+S+ VREALMEPLR C+ AK F P  D                    C  C A R  LY++ +E+L VPD+   DFE    +++ +VA EELD F EWT EFGQEG
Sbjct:    1 MNGTNFIKQGIEVVSEAIQADKDEDYERALQLYKRALEVFMTGVKYEKNPAARATILQRVDGYMKRAEDLKDVLEKQRQAKANPQGSAGTXXXXXXDKEGDDDETSKLKGQLASAIVTEKPNVAWADVAGLEGAKDALKEAVILPRKFPQLFVGKRQPWRGILLYGPPGTGKSFLAKAVATEADAQFFAVSSSDLVSKWQGESERLVKNLFEMARHEEHAIIFIDEIDSMCGSRSEGESDATRRIKTEFLVQMQGV--STRKDGLLVLGATNTPWELDPAIRRRFEKRIYIPLPEAAARATMLRLHLGDTPHTLLPGDFDHLATQCDGFSGSDLSVMVREALMEPLRTCQSAKQFQPTID-----------------LADCLKCGAKRMTLYDVPSEQLKVPDVSVEDFEHIVNKSRKTVAEEELDQFVEWTREFGQEG 420          
BLAST of NO10G00340 vs. NCBI_GenBank
Match: GAX21419.1 (vacuolar protein-sorting-associated protein 4 [Fistulifera solaris])

HSP 1 Score: 476.9 bits (1226), Expect = 6.600e-131
Identity = 264/446 (59.19%), Postives = 319/446 (71.52%), Query Frame = 0
Query:    3 NNTFISQAIDIVKQAIEADTKGEYENALGLYKKSLDYFMAGLKYEKNPQTKATISARVEG-------------------RRGGGTATRNPGEDXXXXXXXXXKLKGALSSSIVTEKPNVKWDDVAGLDLAKEALKEAVILPVKFPQLFVGKRKPWRGILLYGPPGTGKSYLAKAVATEADCKFFSVSSSDLVSKWQGESERLVRSLFEMAR--EEGRAIIFIDEVDSLCGQRSEGEADSVRRIKTEFLVQMDGVGKADPTKQVLILGATNIPWELDPAIRRRFEKRVYIPLPEASARAIMFKINLGDTPNSLTDEEFAQLADMTEGCSGADISICVREALMEPLRKCKQAKYFTPNADGMLTP---YHSGT------GEDPNAGTLTCGSCNAVRGGLYEIEAEKLLVPDIEFADFEKAAKRAKSSVAPEELDHFTEWTNEFGQEG 419
            +N+ I+Q I+IV++AI+AD  GEYE AL  Y+ +L  F  G+KYEKN   K  I+ R  G                   +             XXXXXXXXX  +GAL+ +IVTEKPNV+W+DVAGL+ AKE+LKE VILP KFPQLF GKRKP++GILLYGPPGTGKSYLAKAVATEAD  FFSVSS+DL+SKWQGESERLVR+LFEMAR  E GRAIIFIDEVDSLCG RSEGE+DS+RR+KTEFLVQMDGVGK D   QVLILGATNIPWELD AIRRRFEKRVYIPLPEA AR  M +++LGDTPN LT+++F +L ++TEG SG+DI + V+EALM+PLR+C+QAK F  +  G   P   Y S +        DP     TC  C A R  L+E+  EKL+ P ++ ADFEK  + + S+V+ +EL  F EWT  FGQ+G
Sbjct:    2 DNSMITQGIEIVEKAIKADNAGEYEQALNYYRDALSRFTLGIKYEKNKARKDLITERAAGYMKRAEELKEYIQKQNELDQNXXXXXXXXXXXXXXXXXXXXXXXRGALAGAIVTEKPNVRWEDVAGLENAKESLKETVILPTKFPQLFTGKRKPFKGILLYGPPGTGKSYLAKAVATEADSTFFSVSSADLISKWQGESERLVRNLFEMARESENGRAIIFIDEVDSLCGSRSEGESDSLRRVKTEFLVQMDGVGKQD--GQVLILGATNIPWELDAAIRRRFEKRVYIPLPEAEARTYMVQLHLGDTPNDLTEDDFQKLGEITEGASGSDIGVLVKEALMQPLRRCQQAKQFYVDEAGNYHPCDQYPSCSKCPPKLSSDPPNKDYTCRHCGAKRMTLWEVPPEKLVAPPVQRADFEKVMRNSVSTVSDDELQRFVEWTKLFGQDG 445          
The following BLAST results are available for this feature:
BLAST of NO10G00340 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CBJ26156.13.300e-13859.91putative; katanin like protein [Ectocarpus silicul... [more]
XP_008608588.19.800e-13557.27hypothetical protein SDRG_04687 [Saprolegnia dicli... [more]
GAY00686.19.800e-13556.59vacuolar protein sortingassociating protein putati... [more]
XP_012205223.12.200e-13457.05hypothetical protein SPRG_10874 [Saprolegnia paras... [more]
OQR86899.12.200e-13457.27vacuolar protein sorting-associating protein [Achl... [more]
XP_009830643.11.900e-13356.25hypothetical protein H257_06949 [Aphanomyces astac... [more]
XP_008875388.11.200e-13258.44hypothetical protein H310_10718 [Aphanomyces invad... [more]
OEU16770.16.000e-13258.97AAA-domain-containing protein [Fragilariopsis cyli... [more]
XP_009032318.11.700e-13157.18hypothetical protein AURANDRAFT_18406 [Aureococcus... [more]
GAX21419.16.600e-13159.19vacuolar protein-sorting-associated protein 4 [Fis... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR004ncniR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR015ngnoR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO10G00340.1NO10G00340.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|586859gene_4185Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100901g1gene5241Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO10G00340.1NO10G00340.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO10G00340 ID=NO10G00340|Name=NO10G00340|organism=Nannochloropsis oceanica|type=gene|length=2787bp
ATGGCCAACAACACCTTCATCTCCCAGGCGATCGACATCGTGAAGCAAGC
CATCGAAGCCGACACGAAAGGGGAGTATGAGAATGCCTTGGGCCTGTACA
AGAAGAGCCTCGgtaaggaagggaggggaagacagggagcgaggaaagga
gggggagggcaatattggccaagttttcgggcccagcggtgagatgtcat
ggttgattgagtccctgtcccctcctaatgataaatttcaggaagctacc
tcatccttgccatctggaacacgccatccttctcctgctcatgccttctt
tcctcccttacttccttcacctccctcccctcccctcttcctagACTACT
TCATGGCCGGGCTGAAGTACGAGAAGAACCCTCAGACGAAAGCCACCATC
TCCGCGCGCGTGGAGGGgtacatgaagcgcgctgaggacctaaaagcagt
cgtggataaagacagagcagccgctgcgaacagaggcaaaaaagGAGGAG
GGGGGGAGGGACGGCAACCCGAAACCCGGGCGAGGACGAGGAGAAGGAGG
ACGAGGAGAAGAACAAGCTGAAGGGGGCCTTGAGCTCGTCGATTGTGACG
GAGAAGCCGAATGTGAAGTGGGACGATGTGGCGGGCTTGGACCTGGCAAA
GGAGGCCTTAAAAGAAGCGgtaggtgggtcggatgctcttccctccctcc
cgcccacccaccccatctcccttccctccgacatctcttcccttgtatct
acccctcatcgagccctttcctctctttccaccaccgtgcctttgtcact
gtccctcattgagcccttcccgccccatcacggcgccttcgcctcactga
agcccaatggctcttcctctctatgcttgtcaaggaccatcaaccatgat
gccatcaactcgttgaacctaaaaagcgaattccttcccctcctccctcc
ctccctccctcccccccttccttccttcctccctccctccctccctctcc
ccccctctcagGTCATCCTCCCCGTGAAGTTCCCTCAGCTCTTCGTAGGC
AAGCGTAAACCGTGGCGCGGCATCCTCCTCTACGGACCCCCCGGTACGGG
CAAGTCCTACTTGGCCAAAGCAGTCGCCACCGAAGCAGACTGCAAATTCT
TCTCCGTCTCCTCCTCAGACCTAGgttcgtgccctccctcccttattccc
tccctcccttagtttcgacctccattctcctcgttttcaccctccttttc
ctccctccctccctccctccctccctccctccttccccagTGAGTAAATG
GCAAGGCGAGAGCGAACGCCTGGTCCGCTCCCTCTTCGAAATGGCGCGAG
AAGAGGGCCGGGCAATCATTTTCATCGACGAGGTGGACTCCCTGTGTGGG
CAACGATCGGAGGGGGAGGCGGACAGCGTGCGGAGGATCAAGACGGAATT
TTTAGTGCAGATGGACGGGGTGGGAAAGgtaggctttcagggagggagga
atggacggagggagggagggagggagggagggagggaggaagagggggag
ggagggagggagggaggaggggaagcaatgagggactccgccgccgcttc
aacacgctaccaacccttttttttaaacgaatcattttaaactaaaatgg
tgaaattgcattcctaatatttatattacgtttacacatacacacagGCG
GATCCCACCAAGCAAGTCCTCATCTTGGGGGCCACCAACATCCCCTGGGA
GCTCGACCCCGCCATCCGCCGTCGCTTCGAAAAGCGAGTCTATATCCCGT
TACCTGAAGCCTCTGCCCGTGCCATCATGTTTAAGATAAATCTGGGGGAT
ACGCCCAACTCACTCACTGACGAGGAATTTGCCCAGCTTGCTGACATGAC
GGAAGGCTGTTCGGgtaagatcatgcctgacctccctcgctcgctcctct
cctctctccctccctcctcgtcgccctctttttctgaagaatggatgccc
ttgccatttaacctttccatttaccaacccgccgtccctcctttcctccc
tctcgccgtccctccctccctcccttcctccctcccctcactagGTGCGG
ATATCTCAATATGTGTCCGCGAGGCCCTGATGGAGCCCTTGAGGAAATGC
AAACAGGCCAAGTACTTCACACCCAATGCCGACGgtaggtagggagggag
gaatggagggagggaacgaaggaagaatgtatgcactatcagaggtctac
agaatctcatcctgttcctccccctccctcccttcctccctcccttcctc
cccccttcctcccttcctccgtagGCATGCTCACCCCTTACCATAGCGGC
ACGGGCGAAGACCCGAACgtccctccctgccctcgatgccccatggttct
tttaacggagggattaaataaagggggagggaggggggagggatggcagg
gaacaagGCCGGGACTTTAACCTGTGGGAGTTGTAATGCGGTGCGGGGAG
GCTTGTACGAGATAGAGGCTGAGAAGCTGTTGgtaaggaggggatatcgg
gtgtggagggaacgaggggcagaaagaatatctgctcttcggtcattcaa
tgaacactttattcactcctcccttcctccttccctctctccttccctcc
ctccccatcacttccagGTGCCTGACATTGAATTCGCGGACTTCGAGAAG
GCCGCTAAGCGTGCCAAATCCTCAGTTGCGCCTGAGGAGCTGGATCACTT
CACGGAGTGGACGAACGAATTTGGACAGGAGGGTTGA
back to top

protein sequence of NO10G00340.1

>NO10G00340.1-protein ID=NO10G00340.1-protein|Name=NO10G00340.1|organism=Nannochloropsis oceanica|type=polypeptide|length=419bp
MANNTFISQAIDIVKQAIEADTKGEYENALGLYKKSLDYFMAGLKYEKNP
QTKATISARVEGRRGGGTATRNPGEDEEKEDEEKNKLKGALSSSIVTEKP
NVKWDDVAGLDLAKEALKEAVILPVKFPQLFVGKRKPWRGILLYGPPGTG
KSYLAKAVATEADCKFFSVSSSDLVSKWQGESERLVRSLFEMAREEGRAI
IFIDEVDSLCGQRSEGEADSVRRIKTEFLVQMDGVGKADPTKQVLILGAT
NIPWELDPAIRRRFEKRVYIPLPEASARAIMFKINLGDTPNSLTDEEFAQ
LADMTEGCSGADISICVREALMEPLRKCKQAKYFTPNADGMLTPYHSGTG
EDPNAGTLTCGSCNAVRGGLYEIEAEKLLVPDIEFADFEKAAKRAKSSVA
PEELDHFTEWTNEFGQEG*
back to top
Synonyms
Publications