NO10G00230, NO10G00230 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO10G00230 vs. NCBI_GenBank
Match: XP_014149719.1 (hypothetical protein SARC_11666, partial [Sphaeroforma arctica JP610] >KNC75817.1 hypothetical protein SARC_11666, partial [Sphaeroforma arctica JP610]) HSP 1 Score: 83.2 bits (204), Expect = 1.400e-12 Identity = 45/116 (38.79%), Postives = 63/116 (54.31%), Query Frame = 0 Query: 124 NNLTHLAQTHLQEAYVAERARQADTLEQHGMWKEIMKFLEPEQDEDLEIVARQGPDPFQFKCPITQSTYVEPMRNTVCGHSFSHAGIMQSLNKKTEIKCPVPGCNKPVKRSTLEKD 240 NN+T H +++ + A EQ + E E DED+ + GP FKC ITQ +PM+N+VCGH +S AGIMQ + + IKCP+ GC K V+R+TL+ D Sbjct: 55 NNITDTVTDHKVDSHEWTQESLAFLKEQFPHKYNVDVNSELESDEDIVV----GPATQDFKCKITQMLMKDPMKNSVCGHRYSKAGIMQMIGEHPSIKCPIGGCGKTVRRNTLQHD 166
BLAST of NO10G00230 vs. NCBI_GenBank
Match: EWM25252.1 (Zinc finger, RING/FYVE/PHD-type [Nannochloropsis gaditana]) HSP 1 Score: 82.8 bits (203), Expect = 1.800e-12 Identity = 42/76 (55.26%), Postives = 53/76 (69.74%), Query Frame = 0 Query: 196 MRNTVCGHSFSHAGIMQSLNKKTEIKCPVPGCNKPVKRSTLEKDKXXXXXXXRHARQTQGGGGTSTQRYPVAEEVD 272 MRN CGH++S AGIMQSL KK E+KCPVPGCNK V+ ++LE+D+ R RQTQ G ++QR AEEV+ Sbjct: 1 MRNEPCGHTYSKAGIMQSLRKKHEVKCPVPGCNKAVRAASLERDREKEVLVLRFERQTQ-GVFMASQRDAGAEEVE 75
BLAST of NO10G00230 vs. NCBI_GenBank
Match: XP_005854387.1 (hypothetical protein NGA_0173500 [Nannochloropsis gaditana CCMP526] >EKU21973.1 hypothetical protein NGA_0173500 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 71.6 bits (174), Expect = 4.200e-9 Identity = 40/71 (56.34%), Postives = 50/71 (70.42%), Query Frame = 0 Query: 1 MEAAVDMAMAAIVHEARKLRQGGPAQEGLDILENDINDAFRNIKIALKEELNFPTIKNDAAFYEAQTNRLK 72 MEAAVD AM AI EA+KLR G Q+GLD++ENDIN FR +K+A+ +LN IK + AFY AQ R+K Sbjct: 1 MEAAVDSAMVAIQQEAKKLRSDG--QQGLDVVENDINAVFRFLKLAVTNDLN--AIKTEQAFYRAQIERVK 67
BLAST of NO10G00230 vs. NCBI_GenBank
Match: OBZ91919.1 (E3 SUMO-protein ligase MMS21 [Choanephora cucurbitarum]) HSP 1 Score: 71.6 bits (174), Expect = 4.200e-9 Identity = 34/111 (30.63%), Postives = 61/111 (54.95%), Query Frame = 0 Query: 156 KEIMKFLEPEQDEDLEIVARQGPDPFQFKCPITQSTYVEPMRNTVCGHSFSHAGIMQSLNKKTEIKCPVPGCNKPVKRSTLEKDKXXXXXXXRHARQTQGGGGTSTQRYPV 267 +E+ +E +++D+ + GP KCP+T + +PM + +C H+FS + I + I CP+PGCN+PV+R++L+ D R A++ + G +TQ + V Sbjct: 146 EEMPSLVETTEEDDIVM----GPSKISLKCPLTTIWFEDPMTSIICKHTFSKSAIFSLFKHQNAIPCPIPGCNRPVQRASLKPDDLMAERVKR-AKEREKEGQKATQFFDV 251
BLAST of NO10G00230 vs. NCBI_GenBank
Match: XP_009023089.1 (hypothetical protein HELRODRAFT_162723 [Helobdella robusta] >ESN99211.1 hypothetical protein HELRODRAFT_162723 [Helobdella robusta]) HSP 1 Score: 68.2 bits (165), Expect = 4.600e-8 Identity = 30/61 (49.18%), Postives = 42/61 (68.85%), Query Frame = 0 Query: 182 QFKCPITQSTYVEPMRNTVCGHSFSHAGIMQSLN-KKTEIKCPVPGCN--KPVKRSTLEKD 240 Q KCPITQST +EP+RN +CGHS+ G +Q +N + + +CPVPGC +P+ LE+D Sbjct: 304 QTKCPITQSTMIEPVRNKLCGHSYDRKGALQLINMRANKARCPVPGCANVEPLNEDQLEED 364
BLAST of NO10G00230 vs. NCBI_GenBank
Match: KYQ91755.1 (hypothetical protein DLAC_07543 [Tieghemostelium lacteum]) HSP 1 Score: 67.8 bits (164), Expect = 6.000e-8 Identity = 28/74 (37.84%), Postives = 44/74 (59.46%), Query Frame = 0 Query: 165 EQDEDLEIVARQGPDPFQFKCPITQSTYVEPMRNTVCGHSFSHAGIMQSLNKKTEIKCPVPGCNKPVKRSTLEK 239 ++D+DL + ++ KCPI+Q +VEP++N CGH +S A I L K ++ CPV GCNK + + E+ Sbjct: 147 DEDDDLSLASQS----VNIKCPISQQIFVEPVKNRECGHLYSKASIESYLKNKNQVACPVAGCNKKITHGSYER 216
BLAST of NO10G00230 vs. NCBI_GenBank
Match: OAO14375.1 (hypothetical protein AV274_3965 [Blastocystis sp. ATCC 50177/Nand II]) HSP 1 Score: 67.0 bits (162), Expect = 1.000e-7 Identity = 31/85 (36.47%), Postives = 47/85 (55.29%), Query Frame = 0 Query: 156 KEIMKFLEPEQDEDLEIVARQGPDPFQFKCPITQSTYVEPMRNTVCGHSFSHAGIMQSLNKKTEIKCPVPGCNKPVKRSTLEKDK 241 K M D+D+EI + + CPI++ +V P+RN C H++S I+ + KT +KCPV GCNK V ++LE D+ Sbjct: 98 KRSMTARNRNNDDDIEIDGVEMDTKSRLLCPISRERFVHPVRNKGCKHTYSRDAIVNLIGHKTSVKCPVKGCNKNVSLNSLEDDE 182
BLAST of NO10G00230 vs. NCBI_GenBank
Match: PRP85329.1 (hypothetical protein PROFUN_06931 [Planoprotostelium fungivorum]) HSP 1 Score: 67.0 bits (162), Expect = 1.000e-7 Identity = 40/119 (33.61%), Postives = 63/119 (52.94%), Query Frame = 0 Query: 131 QTHLQEAYVAERARQADTLE-----QHGMWK-EIMKFLEPEQDEDLEIVARQGPDPFQFKCPITQSTYVEPMRNTVCGHSFSHAGI---MQSLNKKTEIKCPVPGCNKPVKRSTLEKDK 241 + HL + + A++A++ Q +WK + P +D+DL I D CPIT+ V+PMRN CGH + + I ++S+ K +I CPV GC+K V +++LE DK Sbjct: 93 EDHLNKLNKKDAAKEAESHPKLIDYQKKIWKAQYPNKPFPGEDDDLIIT----NDEIDINCPITKKQLVKPMRNMACGHHYEQSAIEEYLKSMRKHRQIDCPVAGCSKTVSKTSLEYDK 207
BLAST of NO10G00230 vs. NCBI_GenBank
Match: XP_009033730.1 (hypothetical protein AURANDRAFT_61757 [Aureococcus anophagefferens] >EGB11353.1 hypothetical protein AURANDRAFT_61757 [Aureococcus anophagefferens]) HSP 1 Score: 65.9 bits (159), Expect = 2.300e-7 Identity = 34/102 (33.33%), Postives = 53/102 (51.96%), Query Frame = 0 Query: 146 ADTLEQHGMWKEIMKFLEP-------EQDEDLEIVARQGPDPFQFKCPITQSTYVEPMRNTVCGHSFSHAGIMQSLNKKTEIKCPVPGCNKPVKRSTLEKDK 241 A +E G +K++ K P + DE++++ Q FKCPIT +V+PM + CGH+FS M +K KC V GC + + ++ L+KDK Sbjct: 119 APDVELDGQFKKMRKVCAPVLGGGDDDSDEEIQVDETQADQEADFKCPITTGLFVDPMISKTCGHTFSKKAAMSYFHKTIPKKCAVFGCAQLLTQADLKKDK 220
BLAST of NO10G00230 vs. NCBI_GenBank
Match: OAQ29144.1 (hypothetical protein K457DRAFT_32550 [Mortierella elongata AG-77]) HSP 1 Score: 65.5 bits (158), Expect = 3.000e-7 Identity = 32/79 (40.51%), Postives = 44/79 (55.70%), Query Frame = 0 Query: 163 EPEQDEDLEI-VARQGPDPFQFKCPITQSTYVEPMRNTVCGHSFSHAGIMQSLNKKTEIKCPVPGCNKPVKRSTLEKDK 241 E E DED+EI V R G + KCP+T +P+ + VC HSFS A I + + CPV GCN+P+ L+ +K Sbjct: 253 EDEDDEDMEIMVTRDGNNLQSLKCPLTTQFLEDPVTSAVCKHSFSSAAIHALIRSRPRSVCPVHGCNRPIALENLQPNK 331 The following BLAST results are available for this feature:
BLAST of NO10G00230 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 12
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO10G00230 ID=NO10G00230|Name=NO10G00230|organism=Nannochloropsis oceanica|type=gene|length=2645bpback to top protein sequence of NO10G00230.1 >NO10G00230.1-protein ID=NO10G00230.1-protein|Name=NO10G00230.1|organism=Nannochloropsis oceanica|type=polypeptide|length=273bpback to top Synonyms
Publications
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