NO10G00220, NO10G00220 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO10G00220 vs. NCBI_GenBank
Match: XP_020460102.1 (serine/threonine-protein kinase SRK2H-like [Monopterus albus]) HSP 1 Score: 72.4 bits (176), Expect = 9.000e-9 Identity = 62/201 (30.85%), Postives = 87/201 (43.28%), Query Frame = 0 Query: 236 LLAHPCSPYEDTLKAVFSSVLHAVAYLHGNNVLHRRLSLCSLQRGPASFPWQ--VRLA------LFPPPSSGGGSEGRRGLESVMLAPEVRGREEWRKGGREEWTPAADIWALGIMLWQFLIGEARAPPVKEEGGRGCMTLDFEALMMSHERV---CRGREGRRAIDLLAWMLQDDPEARPSLGQVMGHTWWEGREGGHLS 426 +L H EDT K F+ ++ AVAY H +V+HR L FP Q V+L LF P + S G APE+ EE+ PA DIW+LG++L+ + G PP +E + + + E V CR DL++ MLQ DP R SL ++ H W +G + LS Sbjct: 142 ILRHEGGVAEDTAKRHFAQIVRAVAYCHQLHVVHRDLK----PENVVFFPQQGVVKLTDFGFSNLFKPGTMLATSCGSLAYS----APEILLGEEYD-------APAVDIWSLGVILYMLMCG---VPPFQEANDSETLVMILDCRYSIPEHVSDNCR--------DLISKMLQKDPSHRASLEEIAAHNWLQGLDNALLS 316
BLAST of NO10G00220 vs. NCBI_GenBank
Match: XP_007905791.1 (PREDICTED: LOW QUALITY PROTEIN: SNF-related serine/threonine-protein kinase-like [Callorhinchus milii]) HSP 1 Score: 71.6 bits (174), Expect = 1.500e-8 Identity = 62/244 (25.41%), Postives = 101/244 (41.39%), Query Frame = 0 Query: 236 LLAHPCSPYEDTLKAVFSSVLHAVAYLHGNNVLHRRLSLCSLQRGPASFPWQVRLALFPPPSSGGGSEGRRGLES----VMLAPEVRGREEWRKGGREEWTPAADIWALGIMLWQFLIGEARAPPVKEEGGRGCMTLDFEALMMSHERVCRGREGRRAIDLLAWMLQDDPEARPSLGQVMGHTWWEGRE---GGHLSLPRAGYREMKRGLDVRREVAVLSSWGGREGGRGMEVGVMALDDLSQL 473 ++ H E+ K F+ ++HA++Y H +V+HR L F Q + L S G+ S APE+ +E+ PA DIW+LG++L+ + G PP E +T+ + + V + L++ MLQ DP+ R SLG++ H W +G + LSLP Y+ + D E+ + S G RG + DD + + Sbjct: 104 IMNHEKGLSEEQAKVYFAQIVHAISYCHTLHVVHRDLK----PENVVFFKEQGVVKLTDFGFSNRFQPGKMLTTSCGSLAYSAPEILLGDEYD-------APAVDIWSLGVILYMLVCG---YPPFHEVNDSETLTMIMDCRYTVPQHVSTACQ-----SLISRMLQRDPKRRASLGEIESHPWLQGVDPSPAKKLSLPLTSYKSLS---DEEHEIIIQSMECGSIADRGAIQEALEADDYNHI 325
BLAST of NO10G00220 vs. NCBI_GenBank
Match: XP_013917748.1 (PREDICTED: SNF-related serine/threonine-protein kinase, partial [Thamnophis sirtalis]) HSP 1 Score: 71.6 bits (174), Expect = 1.500e-8 Identity = 52/187 (27.81%), Postives = 84/187 (44.92%), Query Frame = 0 Query: 236 LLAHPCSPYEDTLKAVFSSVLHAVAYLHGNNVLHRRLSLCSLQRGPASFPWQVRLALFPPPSSGGGSEGRRGLES----VMLAPEVRGREEWRKGGREEWTPAADIWALGIMLWQFLIGEARAPPVKEEGGRGCMTLDFEALMMSHERVCRGREGRRAIDLLAWMLQDDPEARPSLGQVMGHTWWEG 419 ++ H ED K F+ ++HA++Y H +V+HR L F Q + L S G++ S APE+ +E+ PA DIW+LG++L+ + G+ PP +E +T ++M + R + DL+ MLQ DP+ R SL ++ HTW +G Sbjct: 104 IMKHEEGLNEDLAKKYFAQIVHAISYCHKLHVVHRDLK----PENVVFFEKQGLVKLTDFGFSNKFQPGKKLTTSCGSLAYSAPEILLGDEYD-------APAVDIWSLGVILYMLVCGQ---PPFQEANDSETLT-----MIMDCKYTVPSRVSKECKDLITQMLQRDPKRRASLEEIENHTWLQG 271
BLAST of NO10G00220 vs. NCBI_GenBank
Match: XP_024137939.1 (serine/threonine-protein kinase SRK2H-like [Oryzias melastigma]) HSP 1 Score: 70.5 bits (171), Expect = 3.400e-8 Identity = 62/201 (30.85%), Postives = 86/201 (42.79%), Query Frame = 0 Query: 236 LLAHPCSPYEDTLKAVFSSVLHAVAYLHGNNVLHRRLSLCSLQRGPASFPWQ--VRLA------LFPPPSSGGGSEGRRGLESVMLAPEVRGREEWRKGGREEWTPAADIWALGIMLWQFLIGEARAPPVKEEGGRGCMTLDFEALMMSHERV---CRGREGRRAIDLLAWMLQDDPEARPSLGQVMGHTWWEGREGGHLS 426 +L H E T K F+ ++ AVAY H +V+HR L FP Q V+L LF P S G APE+ EE+ PA DIW+LG++L+ + G PP +E + + + E + CR DL++ MLQ DP R SL ++ GH W EG + LS Sbjct: 118 ILRHEGGVAEGTAKRHFAQIVQAVAYCHRLHVVHRDLK----PENVVFFPQQGTVKLTDFGFSNLFKPGIMLATSCGSLAYS----APEILLGEEYD-------APAVDIWSLGVILYMLVCG---VPPFQETNDSETLVMILDCRYSVPEHISDNCR--------DLISRMLQRDPSRRASLEEIEGHQWLEGLDNNLLS 292
BLAST of NO10G00220 vs. NCBI_GenBank
Match: CDS13399.1 (hypothetical protein LRAMOSA05577 [Lichtheimia ramosa]) HSP 1 Score: 70.1 bits (170), Expect = 4.400e-8 Identity = 48/175 (27.43%), Postives = 79/175 (45.14%), Query Frame = 0 Query: 245 EDTLKAVFSSVLHAVAYLHGNNVLHRRLSLCSLQRGPASFPWQVRLALFPPP--SSGGGSEGRRGLESVMLAPEVRGREEWRKGGREEWTPAADIWALGIMLWQFLIGEA--RAPPVKEEGGRGCMTLDFEALMMSHERVCRGREGRRAIDLLAWMLQDDPEARPSLGQVMGHTW 416 ED ++ +F + HAVAY+H N ++HR L L ++ V+L F + GG + APE + KGG+ + + D+W+LG+ML+ L A + GR + +S R A DL+ ML+ + + RP++ +V+GH W Sbjct: 247 EDEIRIIFDQIFHAVAYMHANEMVHRDLKLENVIVTDKD-KLHVKLGDFGMSRFDTDGGLFDTACGTIIYCAPERLHVSDTSKGGKICYNKSVDVWSLGVMLYAALAHSMPFNANDIDSPEGRRALENRIRTGKVSFHDAVWHRVSADAKDLILRMLETNHDKRPTMEEVIGHRW 420
BLAST of NO10G00220 vs. NCBI_GenBank
Match: XP_015679673.1 (PREDICTED: SNF-related serine/threonine-protein kinase-like [Protobothrops mucrosquamatus]) HSP 1 Score: 70.1 bits (170), Expect = 4.400e-8 Identity = 48/183 (26.23%), Postives = 82/183 (44.81%), Query Frame = 0 Query: 236 LLAHPCSPYEDTLKAVFSSVLHAVAYLHGNNVLHRRLSLCSLQRGPASFPWQVRLALFPPPSSGGGSEGRRGLESVMLAPEVRGREEWRKGGREEWTPAADIWALGIMLWQFLIGEARAPPVKEEGGRGCMTLDFEALMMSHERVCRGREGRRAIDLLAWMLQDDPEARPSLGQVMGHTWWEG 419 ++ H ED K F+ ++HA++Y H +V+HR L P + + + L G ++ + G + + G E PA DIW+LG++L+ + G+ PP +E +T ++M + R + DL+ MLQ DP+ R SL ++ HTW +G Sbjct: 104 IMKHEEGLNEDLAKKYFAQIVHAISYCHKLHVVHRDLK-------PENVVFFEKPGLVKLTDFGFSNKFQPGKKLTTSCGSLAYSAPEILLGDEYDAPAVDIWSLGVILYMLVCGQ---PPFQEANDSETLT-----MIMDCKYTVPSRVSKECKDLITRMLQRDPKQRASLEEIENHTWLQG 271
BLAST of NO10G00220 vs. NCBI_GenBank
Match: XP_018559608.1 (PREDICTED: LOW QUALITY PROTEIN: putative CBL-interacting protein kinase 27 [Lates calcarifer]) HSP 1 Score: 70.1 bits (170), Expect = 4.400e-8 Identity = 65/202 (32.18%), Postives = 89/202 (44.06%), Query Frame = 0 Query: 236 LLAHPCSPYEDTLKAVFSSVLHAVAYLHGNNVLHRRLSLCSLQRGPASFPWQ--VRLA------LFPPPSSGGGSEGRRGLESVMLAPEVRGREEWRKGGREEWTPAADIWALGIMLWQFLIGEARAPPVKEEGGRGCMTLDFEALMMSHERVCR----GREGRRAIDLLAWMLQDDPEARPSLGQVMGHTWWEGREGGHLS 426 +L H E T K F+ ++ AVAY H +V+HR L FP Q V+L LF P + S G APE+ EE+ PA DIW+LG++L+ + G PP +E T D E L+M + CR R DL++ MLQ DP R SL ++ H W +G + LS Sbjct: 142 ILRHEGGVAEGTAKRHFAQIVRAVAYCHQLHVVHRDLK----PENVVFFPQQGAVKLTDFGFSNLFQPGTMLATSCGSLAYS----APEILLGEEYD-------APAVDIWSLGVILYMLVCG---VPPFQE-------TNDSETLVMILD--CRYSVPDRVSDNCRDLISRMLQRDPSRRASLKEIEAHDWLQGLDNALLS 316
BLAST of NO10G00220 vs. NCBI_GenBank
Match: XP_002907048.1 (protein kinase, putative [Phytophthora infestans T30-4] >EEY63612.1 protein kinase, putative [Phytophthora infestans T30-4]) HSP 1 Score: 69.7 bits (169), Expect = 5.800e-8 Identity = 53/171 (30.99%), Postives = 79/171 (46.20%), Query Frame = 0 Query: 245 EDTLKAVFSSVLHAVAYLHGNNVLHRRLSLCSLQRGPASFPWQVRLALFPPPSSGGGSEGRRGLESVMLAPEVRGREEWRKGGREEWTPAADIWALGIMLWQFLIGEARAPPVKEEGGRGCMTLDFEALMMSHERVCRGREGRRAIDLLAWMLQDDPEARPSLGQVMGHTW 416 E T K +F VL VAYLH + V+HR L L +L +V+++ F + G +APEV E+ E + A D+W+LG +L+ L+G+ PP EG + TL+ A + A DL+ +L DP +RPS Q++ H W Sbjct: 114 EHTAKKIFRQVLMGVAYLHASGVIHRDLKLANLLLNGNG---EVKISDFGLAARLGDDHVTMCGTPNFIAPEVLMAED------EPYDEAVDVWSLGCILYCLLLGK---PPF--EGRKVSETLENVANAGQNPLQFPDGFSSSASDLIKRLLTSDPRSRPSAQQILLHPW 270
BLAST of NO10G00220 vs. NCBI_GenBank
Match: XP_010882345.1 (PREDICTED: SNF-related serine/threonine-protein kinase-like [Esox lucius]) HSP 1 Score: 69.7 bits (169), Expect = 5.800e-8 Identity = 58/206 (28.16%), Postives = 93/206 (45.15%), Query Frame = 0 Query: 236 LLAHPCSPYEDTLKAVFSSVLHAVAYLHGNNVLHRRLS----LCSLQRGPASFPWQVRLALFPPPSSGGGSEGRRGLESVMLAPEVRGREEWRKGGREEWTPAADIWALGIMLWQFLIGEARAPPVKEEGGRGCMTLDFEALMMSHERVCRGREGRRAIDLLAWMLQDDPEARPSLGQVMGHTWWEGRE---GGHLSLPRAGYREM 435 +L H EDT K +F+ ++ A++Y H +V+HR L + Q+G LF P + S G APE+ EE+ PA DIW+LG++L+ + G+ PP +E +T+ +M H V DL++ +LQ DP +R SL ++ H W +G + GH + P +R + Sbjct: 104 ILRHEGGVAEDTAKVLFAQIVRAISYCHRLHVVHRDLKPENVVFFRQQGTVKLTDFGFSNLFKPGTMLMTSCGSLAYS----APEILLGEEYD-------APAVDIWSLGVILYMLVCGQ---PPFQETNDSETLTM----IMDCHYTV-PTHVSADCKDLISRILQRDPCSRASLKEIKNHPWLQGVDPSPSGHSAAPFTSHRSL 290
BLAST of NO10G00220 vs. NCBI_GenBank
Match: KKF30454.1 (SNF-related serine/threonine-protein kinase [Larimichthys crocea]) HSP 1 Score: 69.7 bits (169), Expect = 5.800e-8 Identity = 61/201 (30.35%), Postives = 86/201 (42.79%), Query Frame = 0 Query: 236 LLAHPCSPYEDTLKAVFSSVLHAVAYLHGNNVLHRRLSLCSLQRGPASFPWQ--VRLA------LFPPPSSGGGSEGRRGLESVMLAPEVRGREEWRKGGREEWTPAADIWALGIMLWQFLIGEARAPPVKEEGGRGCMTLDFEALMMSHERV---CRGREGRRAIDLLAWMLQDDPEARPSLGQVMGHTWWEGREGGHLS 426 +L H E+T K F+ ++ AVAY H +V+HR L FP Q V+L LF P + S G APE+ EE+ PA DIW+LG++L+ + G PP +E + + + E V CR DL++ MLQ DP R SL ++ H W G + LS Sbjct: 114 ILRHEGGVAEETAKRHFAQIVRAVAYCHQLHVVHRDLK----PENVVFFPQQGAVKLTDFGFSNLFQPGTMLATSCGSLAYS----APEILLGEEYD-------APAVDIWSLGVILYMLVCG---VPPFQETNDSETLVMILDCRYCVPEHVSDDCR--------DLISRMLQKDPSRRASLDEIEAHDWLHGLDNALLS 288 The following BLAST results are available for this feature:
BLAST of NO10G00220 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO10G00220 ID=NO10G00220|Name=NO10G00220|organism=Nannochloropsis oceanica|type=gene|length=3762bpback to top protein sequence of NO10G00220.1 >NO10G00220.1-protein ID=NO10G00220.1-protein|Name=NO10G00220.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1018bpback to top protein sequence of NO10G00220.2 >NO10G00220.2-protein ID=NO10G00220.2-protein|Name=NO10G00220.2|organism=Nannochloropsis oceanica|type=polypeptide|length=1002bpback to top Synonyms
Publications
|