NO10G00160, NO10G00160 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO10G00160 vs. NCBI_GenBank
Match: WP_004040764.1 (hypothetical protein [Methanofollis liminatans] >EJG08387.1 hypothetical protein Metli_2450 [Methanofollis liminatans DSM 4140]) HSP 1 Score: 96.3 bits (238), Expect = 2.500e-16 Identity = 88/327 (26.91%), Postives = 135/327 (41.28%), Query Frame = 0 Query: 108 LGPRDAVVWLGCTPPPAAYFSIRSYVAFR-FSPSVWFPAAELGDPANLYTLNSTGGALDPYEKTTMLVSTGDRETARHVKNAFSEAGLPKGVDNLDVIPSTLARFRDRQGHPLWVTDKSDAFAWQFRVSQFENKDDAEAYFNQTWPVYLVRARPRYEQKGPRPLPPPVARTRGTGQDEAYLHPSVQLLEEKIISTYASKGSKLSYRFPMDHIVP----DVERCLNDPTYAPIFQPVPAW---HFPGWPSCDWFSADALYTGL---PNTTDLSALTFPLTRTYVVLGVNQPRLEKSIYTNLMVTAVAAFEGVRGEEGWEGVGRMTGRD 424 LGP +AVV++G TPP YF Y+ R + + A + D N +N+ G DPY +TTM+V+T DR ++ A AG + N V PS++ + + + D +D FA R + F +K+ + Y T P ++R P + P PV R +GTGQ E L + L + I+ Y+ + P VP ++R ++ P + W P+ +F Y L P T + F +V GVN K+ Y + V G + W GVG +T D Sbjct: 109 LGPDEAVVFVGRTPPECRYFGYEHYILGRTYGTEARWLFANIADSLNNLVINTNGTPGDPYNQTTMIVATADRGINERIRTAAVSAGYSDSIMNTLVFPSSILK--------MGLEDDADTFAIFIRPALFTDKEAGDEYIENT-PATILRLTPNTTAE-LDPYGYPVLRVKGTGQTELDLTDDLNELRDAILERYSGLN---AMELPTSQGVPAGIDAIQRGVD--AVGPSSDAMYLWTANQTVSSPTPPFFDTTQYYDFLRDPPITLGNTTGEF-----IIVYGVNHVATGKATYASFT---------VYGADVWNGVGTVTDAD 406
BLAST of NO10G00160 vs. NCBI_GenBank
Match: WP_007315695.1 (PEGA domain-containing protein [Methanolinea tarda]) HSP 1 Score: 95.9 bits (237), Expect = 3.200e-16 Identity = 68/204 (33.33%), Postives = 101/204 (49.51%), Query Frame = 0 Query: 112 DAVVWLGCTPPPAAYFSIRSYVAFRFSPSVWFPA--------AELGDPANLYTL--NSTGGALDPYEKTTMLVSTGDRETARHVKNAFSEAGLPKGVDNLDVIPSTLARFRDRQGHPLWVTDKSDAFAWQFRVSQFENKDDAEAYFNQTWPVYLVRARPRYEQKGPRPLPPPVARTRGTGQ-DEAYLHPSVQLLEEKIISTYAS 305 +A+V++G TPP YFS RSY+ R WF A LGD N Y + + G PY+K M+++T D+ T V++A +AG P G+ N D+IPS L R + +++ SD A+ R++ F N+ + Y N T P Y+ R P P+P P RGTG E L + + L + I++ Y S Sbjct: 478 EAIVFVGSTPPEVKYFSYRSYIGTR-----WFTQLDDYQRIFASLGDTINNYRIKTGTAPGRPGPYKKPVMIITTADKGTNERVRSAAQKAGYPAGMINDDIIPSGLIR--------MGLSNTSDTIAFIHRLAFFANETEGAEYMNGT-PGYVFRLTPNTPHT-PQPYGVPRLIPRGTGDAHELDLLTTQESLRDAIVARYGS 666
BLAST of NO10G00160 vs. NCBI_GenBank
Match: WP_051328355.1 (hypothetical protein [Desulfatirhabdium butyrativorans]) HSP 1 Score: 94.0 bits (232), Expect = 1.200e-15 Identity = 64/201 (31.84%), Postives = 99/201 (49.25%), Query Frame = 0 Query: 106 FTLGPRDAVVWLGCTPPPAAYFSIRSYVAFRFSPSVWFP---AAELGDPANLYTLNSTGGALDPYEKTTMLVSTGDRETARHVKNAFSEAGLPKGVDNLDVIPSTLARFRDRQGHPLWVTDKSDAFAWQFRVSQFENKDDAEAYF-NQTWPVYLVRARPRYEQKGP---RPLPPPVARTRGTGQDEAYLHPSVQLLEEKII 300 F + P +AVV +G TPP Y+S + Y++ R P+ P LGD N+ T++ G DP+ +L+ T D++ ++ A +G+P + N VIPST+ + L + + SD F R + F +++ +AY N T V+ R K P P P P R RG+GQ E L PS++ L + II Sbjct: 101 FRIAPDEAVVLMGLTPPEEKYYSYQIYLSHRQYPAEAGPKFLLNSLGDTVNINTIHKMGS--DPFNTPVVLIFTADKDIDAQIREALIGSGIPSSIINTLVIPSTILK--------LGLDENSDTFLIANRNALFADQNAGDAYVANPTLAVF------RVTPKNPATLNPFPTPTLRIRGSGQTEMDLMPSIEKLRQAII 285
BLAST of NO10G00160 vs. NCBI_GenBank
Match: WP_014587682.1 (hypothetical protein [Methanosaeta harundinacea] >AET65506.1 hypothetical protein Mhar_2153 [Methanosaeta harundinacea 6Ac]) HSP 1 Score: 90.5 bits (223), Expect = 1.400e-14 Identity = 67/199 (33.67%), Postives = 101/199 (50.75%), Query Frame = 0 Query: 112 DAVVWLGCTPPPAAYFSIRSYVAFRFSPSVWFPA---AELGDPANLYTLNSTGGA----LDPYEKTTMLVSTGDRETARHVKNAFSEAGLPKGVDNLDVIPSTLARFRDRQGHPLWVTDKSDAFAWQFRVSQFENKDDAEAYFNQTWPVYLVRARPRYEQKGPRPLPPPVARTRGTGQ-DEAYLHPSVQLLEEKIISTY 303 +AVV++G TPP +YFS RSYV +F P+ +LGD NL T+ + G DP+++TT+++ST D V+ A AG + N DVIPS++ + + ++SD FA+ RV+ F+++ EAY N P ++R P E P P R RG+G E L P++ L I+ Y Sbjct: 109 EAVVYIGKTPPECSYFSYRSYVFDKFYPNEGVYKRIFGDLGDALNLRTIKTEGTPDGTDGDPFDETTLIISTADGGIDERVREAALLAGYSPSIMNTDVIPSSILN--------MGLENRSDTFAFVIRVNFFKDEVAGEAYVNDP-PGTVLRITPA-EPATLDPYKVPDLRVRGSGNASELDLTPNLNDLRRAILERY 297
BLAST of NO10G00160 vs. NCBI_GenBank
Match: WP_066630101.1 (hypothetical protein [Clostridium magnum] >KZL89133.1 hypothetical protein CLMAG_56190 [Clostridium magnum DSM 2767] >SHI03471.1 hypothetical protein SAMN02745944_02166 [Clostridium magnum DSM 2767]) HSP 1 Score: 90.1 bits (222), Expect = 1.800e-14 Identity = 89/331 (26.89%), Postives = 133/331 (40.18%), Query Frame = 0 Query: 108 LGPRDAVVWLGCTPPPAAYFSIRSYVAF-----------------RFSPSVWFPAAELGDPA---NLYTLNSTGGAL-DPYEKTTMLVSTGDRETARHVKNAFSEAGLPKGVDNLDVIPSTLARFRDRQGHPLWVTDKSDAFAWQFRVSQFENKDDAEAYFNQTWP-VYLVRARPRYEQKGPRPLPPPVARTRGTGQDEAYLHPS----VQLLEEKIISTYASKGSKLSYRFPMDHIVPDVERCLNDPTYAPIFQPVPAWHFPGWPSCDWFSADALYTGLPNTTDLSALTFPLTRT---YVVLGVNQPRLEKSIYTNLMVTAVAAFEGVRG 410 L P +AVV +G TPPPA Y+ RSYV F ++ A LGD NL+T N+ GA P+ +T+++ST DR + ++NA AG + + N D IP L +G D F + R + + +++ Y N + + R P+ P P P + R TG E + PS + L +II+ Y DH+ D+ + D Y I + + + DA+Y T D F LT +V G+N R +K+IY+N F GV G Sbjct: 147 LRPDEAVVLIGITPPPALYYCFRSYVGFVENKPEKNYSEYITTGDNYTGFYHMIFASLGDQLNNYNLWTSNTPKGAPGKPFNSSTIIISTADRNINKQIRNALGTAGYSQDIMNEDNIPMDLVNMGLEEG--------KDTFIFMMRFALWADQNIGHQYINNIDKFIKVFRITPKIPLTNLNPWPVPTLKIRETGITEYQVVPSSRNDLDHLRNEIINKYGGT--------EYDHVDLDLTVGIPD-NYNAILRDINIY---------GDDRDAVYF---KTED-----FKLTSNDDFLIVYGINHERTQKAIYSNASFYGAELFNGVAG 443
BLAST of NO10G00160 vs. NCBI_GenBank
Match: WP_011422959.1 (hypothetical protein [Anaeromyxobacter dehalogenans] >ABC83677.1 conserved hypothetical protein [Anaeromyxobacter dehalogenans 2CP-C]) HSP 1 Score: 88.2 bits (217), Expect = 6.800e-14 Identity = 64/210 (30.48%), Postives = 98/210 (46.67%), Query Frame = 0 Query: 106 FTLGPRDAVVWLGCTPPPAAYFSIRSYVAFRFSP-SVWFPAAELG--DPANLYTLNSTGGALDPYEKTTMLVSTGDRETARHVKNAFSEAGLPKGVDNLDVIPSTLARFRDRQGHPLWVTDKSDAFAWQFRVSQFEN--KDDAEAYFNQTWPVYLVRARPR--YEQKGPRPLPPPVARTRGTGQDEAYLHPSVQLLEEKIISTYASKGSK 309 F L P +A+V +G TPPP YF+ +++A + P P + DP N ++ + G DP+ K LV T DR T R V A + G N V P+++ D D +D F Q R + +E+ ++ EAY P+ + R PR ++ P P P R RGTGQ E YL ++ +L ++I+ +K Sbjct: 95 FKLRPDEAIVLVGTTPPPERYFAFYAWIASKVYPDGQRLPGLMVAPTDPVNHLSIKTEGPPGDPFGKRVALVFTPDRGTYRSVLQALGDVGYSTDAVNQVVFPASMLNLGD--------GDAADDFRIQMRNAMWEDGYENAGEAYIRNA-PLRMFRVTPRVPVDEGDLDPFPLPGLRIRGTGQSEVYLWNTLGVLRQRILDANPGMDAK 295
BLAST of NO10G00160 vs. NCBI_GenBank
Match: WP_014585725.1 (hypothetical protein [Methanosaeta harundinacea] >AET63537.1 hypothetical protein Mhar_0146 [Methanosaeta harundinacea 6Ac]) HSP 1 Score: 88.2 bits (217), Expect = 6.800e-14 Identity = 88/330 (26.67%), Postives = 136/330 (41.21%), Query Frame = 0 Query: 106 FTLGPRDAVVWLGCTPPPAAYFSIRSYVAFR-FSPSVWFPAAELGDPANLYTLNS----TGGALDPYEKTTMLVSTGDRETARHVKNAFSEAGLPKGVDNLDVIPSTLARFRDRQGHPLWVTDKSDAFAWQFRVSQFENKDDAEAYFNQTWPVYLVRARPRYEQKGPRPLPPPVARTRGTGQDEAYLHPSVQLLEEKIISTYASKG-----SKLSYRFPMDHIVP--DVERCLNDPTYAPIFQPVPAWHFPGWPSCDWFSADALYTGLPNTTDLSALTFPLTRTYVVLGVNQPRLEKSIYTNLMVTAVAAFEGVRGEEGWEGVGRMTGRD 424 ++L P +AVV++G TPP YFS+ ++ R + + A GD N +N+ G +PY++TT++VST D+ + ++ A AG +G+ N V+PS + L V + SD FA R S F ++ Y + P + R P E P P P R +GTG E L ++ L I+ YA + + D+I D ND Y A P +P + Y+ L ++ L +V GVN K+ Y N + G + W GVG +T +D Sbjct: 107 WSLRPDEAVVFVGRTPPECRYFSLDQFLMERTYGDETRWIFAPFGDTVNNMVINTEGTPDGSPGNPYDQTTIVVSTADKGIDQRIRAAAQNAGYSEGIINTLVLPSAMLN--------LGVENDSDTFAVFIRGSLFADEQAGNDYIDNK-PAAVFRITPN-ESAEPDPYDMPEIRVQGTGTTEFDLMDDLEELRIAILDRYADLNATELPTSIGLNAGTDYIQTGFDGYGPTNDALYLWTATQTIASQTPPFPDLSQY-----YSYLQDSP--ITLANDTNEFIIVYGVNHVATGKATYQNFV---------PYGADIWNGVGMITDQD 410
BLAST of NO10G00160 vs. NCBI_GenBank
Match: WP_011307812.1 (hypothetical protein [Methanosarcina barkeri] >AAZ71771.1 conserved hypothetical protein [Methanosarcina barkeri str. Fusaro] >AKB51119.1 hypothetical protein MSBRW_1866 [Methanosarcina barkeri str. Wiesmoor]) HSP 1 Score: 88.2 bits (217), Expect = 6.800e-14 Identity = 82/315 (26.03%), Postives = 127/315 (40.32%), Query Frame = 0 Query: 106 FTLGPRDAVVWLGCTPPPAAYFSIRSYVAFR-FSPSVWFPAAELGDPANLYTLNS----TGGALDPYEKTTMLVSTGDRETARHVKNAFSEAGLPKGVDNLDVIPSTLARFRDRQGHPLWVTDKSDAFAWQFRVSQFENKDDAEAYFNQTWPVYLVRARPRYEQKGPRPLPPPVARTRGTGQDEAYLHPSVQLLEEKIISTYASKGSKLSYRFPMDHIVP----DVERCLNDPTYAPIFQPVPAW---HFPGWPSCDWFSADALYTGLPNTTDLSALTFPLTRTYVVLGVNQPRLEKSIYTNLMVTAVAAFEGVR 409 + LGP +AVV++G T P YFS +++ R + A + D N + + G A +P+ +TT+++ T DR + ++ A AG + N V+PS + + V + SD FA FR + F + + Y N T P + R P + P P R RGTGQ E L ++ L I+ Y + P VP ++R +N P V W P+ +F Y L + L +V GVN K+ Y+N + A + GVR Sbjct: 110 WNLGPDEAVVFVGRTAPECRYFSYDNFIMHRTIGDERRWLFANIADTINNLVIKTEGTPNGSAGNPFNQTTIIILTADRSIDQRIRAAAQSAGYSDNIINTQVMPSVMLN--------MGVENDSDTFASFFRPALFNDTQAGDDYINNT-PATVFRITPNNTTE-LDPYDYPELRVRGTGQTEFNLMDDLEELRNAILDRYNESNAT---ELPTSQGVPIGSDAIQRGING--VGPTNDAVYLWSANQTASSPTPPFFDTSQYYPFLQDPE--ITLGNDTDEFIIVYGVNHAATGKATYSNFCIYGAAGWNGVR 407
BLAST of NO10G00160 vs. NCBI_GenBank
Match: CCU85367.1 (conserved exported hypothetical protein [Mesotoga infera]) HSP 1 Score: 87.8 bits (216), Expect = 8.800e-14 Identity = 89/331 (26.89%), Postives = 141/331 (42.60%), Query Frame = 0 Query: 5 MMKLLVLMLAGTASAMEGLARCDTSTNEREHIINSAVEKLEATGDFDVIEGTLTFNHRQIGNPAGRYGTVSFPTW-----SQPMALCKATTF-NQTSPIPFSFCSIAFTLGPRDAVVWLGCTPPPAAYFSIRSYVAFRFSPSVWFPA-AELGDPANLYTLNSTGGALD------PYEKTTMLVSTGDRETARHVKNAFSEAGLPKGVDNLDVIPSTLARFRDRQGHPLWVTDKSDAFAWQFRVSQFENKDDAEAY-----------------FNQTWPVYLVRARPRYEQKGPRPLPPPVARTRGTGQ-DEAYLHPSVQLLEEKIISTYAS 305 M K+ +L++ A + C T + EH +KL + F V EG+L + NPA +G P+ P A+ Q +P + + + L +A+++LG TPPP YFS +++VA RF + LGD N+ T+N TG +++ + T+++ST DR T ++ + AG G+ N +V+PS L R L + D + FR + FEN+ D E Y + + ++ R P + K P P P R R TG E L ++ L E I+ Y S Sbjct: 1 MRKISILLILSLAVVLFSSNNCFTQESV-EHF-----KKLLESQGFTVQEGSL-----YLFNPADLFGNYILPSCFCNNADSPYAVYLIPEGPGQMTPNKYPW---TYKLKENEAIIYLGWTPPPMVYFSYQTFVAGRFYNDAFHRIFGNLGDTINICTIN-TGESIEEDTEGTSFNAPTIIISTPDRNTDAILRAEIARAGFDVGIVNTEVLPSALLR--------LGLEHDDDELTFLFRTAFFENEADREFYTSDPPLVGYKEILVKPPYQSNFRGWVFRVTPPEDLKSD-PFPIPPLRVRATGDTSELELAKTMDRLREAILKEYES 307
BLAST of NO10G00160 vs. NCBI_GenBank
Match: AKB40757.1 (hypothetical protein MSMAW_1766 [Methanosarcina mazei WWM610] >KKG28776.1 hypothetical protein DU52_05975 [Methanosarcina mazei] >KKG31286.1 hypothetical protein DU30_16650 [Methanosarcina mazei] >KKG66148.1 hypothetical protein DU67_06330 [Methanosarcina mazei] >KKG67955.1 hypothetical protein DU43_13215 [Methanosarcina mazei] >KKG75033.1 hypothetical protein DU63_17255 [Methanosarcina mazei] >KKG87125.1 hypothetical protein DU69_09470 [Methanosarcina mazei] >KKH30520.1 hypothetical protein DU58_10725 [Methanosarcina mazei] >KKH42331.1 hypothetical protein DU71_03315 [Methanosarcina mazei] >KKH50117.1 hypothetical protein DU72_09500 [Methanosarcina mazei] >KKH55201.1 hypothetical protein DU74_07520 [Methanosarcina mazei]) HSP 1 Score: 87.4 bits (215), Expect = 1.200e-13 Identity = 83/313 (26.52%), Postives = 128/313 (40.89%), Query Frame = 0 Query: 106 FTLGPRDAVVWLGCTPPPAAYFSIRSYVAFRF--SPSVWFPAAELGDPANLYTLNS----TGGALDPYEKTTMLVSTGDRETARHVKNAFSEAGLPKGVDNLDVIPSTLARFRDRQGHPLWVTDKSDAFAWQFRVSQFENKDDAEAYFNQTWPVYLVRARPRYEQKGPRPLPPPVARTRGTGQDEAYLHPSVQLLEEKIISTY-ASKGSKLSYRFPMDHIVPDVERCLNDPTYAPIFQPVPAW---HFPGWPSCDWFSADALYTGLPNTTDLSALTFPLTRTYVVLGVNQPRLEKSIYTNLMVTAVAAFEGVR 409 + LGP +AVV++G TPP YFS +YV R + W A DP N + + G + DP+ +TT+++ T DR + +++A AG N V+PS + + V + SD FA R + F + E Y N T P + R P + P P R RGTG+ E L ++ L I+ Y S ++L ++R +N P W P+ +F Y L + L + +V GVN K++Y+N + + GVR Sbjct: 109 WNLGPDEAVVFVGRTPPECRYFSYDNYVIHRTVGNERRWV-FANFADPINNLVIKTEGTPDGASGDPFNQTTIIIITADRGIDQRIRDAAESAGYSNNTINTQVLPSVMLN--------MGVENDSDTFASFIRPALFNDTQAEENYINNT-PATIFRITPNNTTE-LDPYDYPELRVRGTGKTEFDLMDDLEELRVAILERYNESNATELPISVWAPVGTDAIQRGIN--VLGPNNDAAYLWTANQTISSPTPPFFDTSEYYPFLRDPA--ITLGNDSNESIIVYGVNHVATGKAMYSNFAIYGADTWNGVR 406 The following BLAST results are available for this feature:
BLAST of NO10G00160 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO10G00160 ID=NO10G00160|Name=NO10G00160|organism=Nannochloropsis oceanica|type=gene|length=4486bpback to top protein sequence of NO10G00160.1 >NO10G00160.1-protein ID=NO10G00160.1-protein|Name=NO10G00160.1|organism=Nannochloropsis oceanica|type=polypeptide|length=534bpback to top protein sequence of NO10G00160.2 >NO10G00160.2-protein ID=NO10G00160.2-protein|Name=NO10G00160.2|organism=Nannochloropsis oceanica|type=polypeptide|length=429bpback to top Synonyms
Publications
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