NO10G00020, NO10G00020 (gene) Nannochloropsis oceanica

Overview
NameNO10G00020
Unique NameNO10G00020
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length377
Alignment locationchr10:5686..6062 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:5686..6062 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO10G00020 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR091ncniR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO10G00020.1NO10G00020.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO10G00020.1NO10G00020.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO10G00020 ID=NO10G00020|Name=NO10G00020|organism=Nannochloropsis oceanica|type=gene|length=377bp
ATGTGCAGGGGAGGAGGAGGGGGAGGAGGAGGGGGAGGAGGAGGGGAGGA
GGAGGGGGAGGAGCAGGGGAAGAGCAGGAGAGGAGGGGAGGAGGGGGAGG
AGCAGGGGAGGAGCAGGGGAGGAGGGGGAGGAGCAGGGGAGGAGCAGGGG
AGGAGGGGAGGAGGAGGGATTACGGACTATACAGAAAGTTACgtacgttt
tttgctctttttacttttttggggttttaatcaccataacgagccttgtc
accgacatgatggcatctccttctatcataatgtgagCGCCAAATGAAGC
CCGCCCCGCATGACGGGGAAGCTGCCGGCATCAGGCCACTGGCGTTTTCT
CGGGACGATGACACCATCCCGCTCTGA
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protein sequence of NO10G00020.1

>NO10G00020.1-protein ID=NO10G00020.1-protein|Name=NO10G00020.1|organism=Nannochloropsis oceanica|type=polypeptide|length=94bp
MCRGGGGGGGGGGGGEEEGEEQGKSRRGGEEGEEQGRSRGGGGGAGEEQG
RRGGGGITDYTESYRQMKPAPHDGEAAGIRPLAFSRDDDTIPL*
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Synonyms
Publications