NO09G04140, NO09G04140 (gene) Nannochloropsis oceanica

Overview
NameNO09G04140
Unique NameNO09G04140
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length868
Alignment locationchr9:1241305..1242172 -

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Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:1241305..1242172 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO09G04140 vs. NCBI_GenBank
Match: KIO25132.1 (hypothetical protein M407DRAFT_211121, partial [Tulasnella calospora MUT 4182])

HSP 1 Score: 76.6 bits (187), Expect = 8.300e-11
Identity = 50/142 (35.21%), Postives = 71/142 (50.00%), Query Frame = 0
Query:    9 MLIVIFHTQQGAFTPYHLYHDFQPTIKALFIDVTKEVLQRGRVDINVFLLGSNELEKLFGILRSLFIGRGFHLKGLGELIGATIEVHSIKQRNPNWDRGQRRLSATG--SYDHTSLTSWEGKMYLEGSVGVVQSAQSARNNG 149
            +++ ++     AF P  LY+D Q  IK ++  V K+ L        + L G++ LE  FG +R+   G    L  L E   +   +  I  +NPNWDRG RRLS TG    DHT+  SW G +    +VG V S  +  NNG
Sbjct:  453 LMLALYRLNGTAFMPGQLYYDSQACIKNIYFCVAKQKLLDPTEKFFIGLCGTDRLEGEFGQIRTARGGPNVDLLQLSERAASAAHMSEIYAKNPNWDRGHRRLSLTGKEGIDHTNPKSWNGNI----TVGAV-SLLTCWNNG 589          
BLAST of NO09G04140 vs. NCBI_GenBank
Match: KIJ27526.1 (hypothetical protein M422DRAFT_190894 [Sphaerobolus stellatus SS14])

HSP 1 Score: 71.2 bits (173), Expect = 3.500e-9
Identity = 43/129 (33.33%), Postives = 64/129 (49.61%), Query Frame = 0
Query:    6 ASTMLIVIFHTQQGAFTPYHLYHDFQPTIKALFIDVTKEVLQRGRVDINVFLLGSNELEKLFGILRSLFIGRGFHLKGLGELIGATIEVHSIKQRNPNWDRGQRRLSATGS--YDHTSLTSWEGKMYLE 133
            AS + +   H    AF    LYHD Q  IK  +  V K+ +Q  +V   +  L  + LE  FG +R+L   R      L E + A  ++ +I + +P+WDRG RRL   G+   DH +  SW G + +E
Sbjct:  102 ASHLALQGMHRHGTAFVLGQLYHDLQSMIKNAYFPVAKQCIQDPKVGFYLCQLRDDRLEGQFGTVRTLTHDRNVDALQLAERLAAAGQMEAIFESHPDWDRGHRRLKLEGAEGIDHVNPRSWIGDVVVE 230          
BLAST of NO09G04140 vs. NCBI_GenBank
Match: KDN44148.1 (hypothetical protein RSAG8_05621, partial [Rhizoctonia solani AG-8 WAC10335])

HSP 1 Score: 70.9 bits (172), Expect = 4.500e-9
Identity = 47/155 (30.32%), Postives = 70/155 (45.16%), Query Frame = 0
Query:    4 AAASTMLIVIFHTQQGAFTPYHLYHDFQPTIKALFIDVTKEVLQRGRVDINVFLLGSNELEKLFGILRSLFIGRGFHLKGLGELIGATIEVHSIKQRNPNWDRGQRRLSATGSY--DHTSLTSWEGKMYL-------EGSVGVVQSAQSARNNGM 150
            A  + +L  IFH     F    LY+D Q TIK     + K  +        +  LG++ LE LFGI R+    R   +  L E  GA  EV +I  + P++DR   RLS    +  DH +  SW G + +         S G +Q+ ++ R  G+
Sbjct:  129 AKCAFLLFTIFHLDSNRFITSQLYYDIQTTIKTAIFSIAKTQILDPMQPFYLIQLGTDRLENLFGIYRTASHDRNLDILQLAERSGAAQEVDNILAKYPDYDRKPYRLSLKSEFGIDHLNPRSWTGDVRVCNVNLSKSWSAGRIQAEEALRRAGI 283          
BLAST of NO09G04140 vs. NCBI_GenBank
Match: KII88930.1 (hypothetical protein PLICRDRAFT_29388 [Plicaturopsis crispa FD-325 SS-3])

HSP 1 Score: 70.9 bits (172), Expect = 4.500e-9
Identity = 45/124 (36.29%), Postives = 64/124 (51.61%), Query Frame = 0
Query:    9 MLIVIFHTQQGAFTPYHLYHDFQPTIKALFIDVTKEVLQRGRVDINVFLLGSNELEKLFGILRSLFIGR---GFHLKGLGELIGATIEVHSIKQRNPNWDRGQRRLSATGS--YDHTSLTSWEG 128
            M  V+F   +GAF P+ LY D Q T+K +   + K+    G   + +F  G + LE LFG LR    GR    F  K L + +GA +++ +I  + P  D G RRLS T +   DH +  SW G
Sbjct:  888 MSFVLFREYRGAFMPHQLYGDMQTTVKNIMFCIAKQQDLDGTQPLYLFWDGDDRLEMLFGRLR--MQGRHNPNFSFKELADRLGAAVDIDAILSQFPELDEGHRRLSTTRTEGADHLNPESWIG 1009          
BLAST of NO09G04140 vs. NCBI_GenBank
Match: PPR07576.1 (hypothetical protein CVT26_002325 [Gymnopilus dilepis])

HSP 1 Score: 70.9 bits (172), Expect = 4.500e-9
Identity = 41/135 (30.37%), Postives = 66/135 (48.89%), Query Frame = 0
Query:    4 AAASTMLIVIFHTQQGAFTPYHLYHDFQPTIKALFIDVTKEVLQRGRVDINVFLLGSNELEKLFGILRSLFIG-RGFHLKGLGELIGATIEVHSIKQRNPNWDRGQRRL----------SATGSYDHTSLTSWEG 128
            AAA+ +++ ++HT +G F P  LY D    IK ++  V K  +        + LLG++ LEK+FG +R++  G        L   I   ++  +I + +P W  G RRL          S T  +DH +  SW+G
Sbjct:   58 AAAAHLILALYHTNKGDFIPVQLYFDVMSMIKNVYFCVAKTQIDNPTAQFWIILLGTDGLEKVFGKVRTMVGGDTNADQLQLANRIDGAVQCINILEEHPEWGAGSRRLTLKPLSEDPDSVTSEHDHINPRSWKG 192          
BLAST of NO09G04140 vs. NCBI_GenBank
Match: KIJ38312.1 (hypothetical protein M422DRAFT_176749, partial [Sphaerobolus stellatus SS14])

HSP 1 Score: 67.0 bits (162), Expect = 6.500e-8
Identity = 41/120 (34.17%), Postives = 60/120 (50.00%), Query Frame = 0
Query:   20 AFTPYHLYHDFQPTIKALFIDVTKEVLQRGRVDINVFLLGSNELEKLFGILRSLFIGRGFHLKGLGELIGATIEVHSIKQRNPNWDRGQRRLSATGS--YDHTSLTSWEGKMYLEGSVGV 138
            AF    LYHD Q  IK +F  V K+ L        +  +G + LE +FG + +L   R      L + + A  E+ SI   +P WDRG RRL   G+   DH +  SW+G + + G+V +
Sbjct:  106 AFISGQLYHDVQAMIKNVFFCVAKQCLLNPLSGFYLCQVGDDRLENVFGTVCTLTHDRNVDALQLSDHLAAAGEITSILSEHPEWDRGHRRLKLEGADGVDHVNPASWKGDV-ITGNVSI 224          
BLAST of NO09G04140 vs. NCBI_GenBank
Match: XP_007328436.1 (hypothetical protein AGABI1DRAFT_126893 [Agaricus bisporus var. burnettii JB137-S8] >EKM80850.1 hypothetical protein AGABI1DRAFT_126893 [Agaricus bisporus var. burnettii JB137-S8])

HSP 1 Score: 66.2 bits (160), Expect = 1.100e-7
Identity = 53/163 (32.52%), Postives = 81/163 (49.69%), Query Frame = 0
Query:    1 MASAAASTMLIVIFHTQQGA-FTPYHLYHDFQPTIKALFIDVTKEVLQRGRVDINVFLL--GSNELEKLFGILRSLFIGRGFHLKGLGELIGATIEVHSIKQRNPNWDRGQRR--LSATGSYDHTSLTSWEGKMYLEGSVGVVQSAQSARNNGMVLGLTSFGV 159
            + S +  + L V    + GA   P  LY D Q TIK ++  V +  LQ    D+  +LL  G++ LE+LFG  R++  GR F +  L E +     +    +RNP+ D G RR  LS+T   DH + +SW G   + GSV +       R+  + L  + FG+
Sbjct:  671 LESLSTFSHLAVALQLEHGATCLPGPLYADTQATIKNIYFVVAR--LQLISPDLTFYLLHEGTDRLERLFGDCRTMDHGRNFDILQLSEKMAMATLISLAFERNPDLDHGHRRLNLSSTAGVDHINPSSWLGNTCV-GSVDLTAVWNKGRDTAVGLLESLFGI 830          
BLAST of NO09G04140 vs. NCBI_GenBank
Match: KDR71948.1 (hypothetical protein GALMADRAFT_143308 [Galerina marginata CBS 339.88])

HSP 1 Score: 66.2 bits (160), Expect = 1.100e-7
Identity = 41/136 (30.15%), Postives = 67/136 (49.26%), Query Frame = 0
Query:    4 AAASTMLIVIFHTQQGAFTPYHLYHDFQPTIKALFIDVTKEVLQRGRVDINVFLLGSNELEKLFGILRSLFIGRGFH--LKGLGELIGATIEVHSIKQRNPNWDRGQRRLSA----------TGSYDHTSLTSWEG 128
            +AA+ +++ I+H  +G F P   + D    IK ++  V K  +       ++ LLG++ LEK+FG +R++ IG   +  L  L   I   ++  +I + +P W    RRL+           T  YDH S  SWEG
Sbjct:  810 SAAAHLILAIYHIDKGNFIPVQTFFDVMSMIKNIYFCVAKTQIDNPAGSFHIILLGTDGLEKVFGKVRTM-IGNDTNADLLQLTNRIDGAVQCVNILENHPEWGGQARRLNVKPLPTDSNDITSKYDHISPRSWEG 944          
BLAST of NO09G04140 vs. NCBI_GenBank
Match: CUA70771.1 (Ubiquitin carboxyl-terminal hydrolase 34 [Rhizoctonia solani])

HSP 1 Score: 65.9 bits (159), Expect = 1.500e-7
Identity = 44/150 (29.33%), Postives = 68/150 (45.33%), Query Frame = 0
Query:    9 MLIVIFHTQQGAFTPYHLYHDFQPTIKALFIDVTKEVLQRGRVDINVFLLGSNELEKLFGILRSLFIGRGFHLKGLGELIGATIEVHSIKQRNPNWDRGQRRLS--ATGSYDHTSLTSWEGKMYL-------EGSVGVVQSAQSARNNGM 150
            +L  +F     +F    LY+D Q TIK     + K  +   +    +  LG++ LE LFGI R+    R   +  L E  GA  EV +I    PN+DR   RLS  +    DH +  SW G + +         S G +++ ++ R  G+
Sbjct:  474 LLFALFRLDGTSFITAQLYYDIQTTIKTAIFSIAKAQILDHQQPFYLIQLGTDRLENLFGIYRTASHDRNLDILQLAERSGAAQEVDNILAEYPNYDRKPYRLSLKSESGVDHLNPRSWTGDVCVCNVVLSKSWSAGRIEAEEALRRAGI 623          
BLAST of NO09G04140 vs. NCBI_GenBank
Match: PIL27027.1 (hypothetical protein GSI_10166 [Ganoderma sinense ZZ0214-1])

HSP 1 Score: 64.7 bits (156), Expect = 3.200e-7
Identity = 42/128 (32.81%), Postives = 65/128 (50.78%), Query Frame = 0
Query:   26 LYHDFQPTIKALFIDVTKEVLQRGRVDINVFLLGSNELEKLFGILRSLFIGRGFHLKGLGELIGATIEVHSIKQRNPNWDRGQRRLSATGS--YDHTSLTSWEGKMYLEGSVGVVQSAQSARNNGMVL 152
            LY D Q  +K + I V +  L    +   + L G++ LE LFG  R+    R F +  L E +G +  + SI +RNP+ DRG RRL+   +   DH +  SW G + +      V+ AQ +R+   +L
Sbjct:  675 LYADSQAVVKNIIICVARLQLVDENLPFYIILEGTDRLEALFGDCRTQDHSRNFDILQLSEKLGTSTLIQSIFERNPDLDRGHRRLTLKDAMGVDHVNPRSWTGNVRVRDVNLGVEWAQGSRDANHLL 802          
The following BLAST results are available for this feature:
BLAST of NO09G04140 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 16
Match NameE-valueIdentityDescription
KIO25132.18.300e-1135.21hypothetical protein M407DRAFT_211121, partial [Tu... [more]
KIJ27526.13.500e-933.33hypothetical protein M422DRAFT_190894 [Sphaerobolu... [more]
KDN44148.14.500e-930.32hypothetical protein RSAG8_05621, partial [Rhizoct... [more]
KII88930.14.500e-936.29hypothetical protein PLICRDRAFT_29388 [Plicaturops... [more]
PPR07576.14.500e-930.37hypothetical protein CVT26_002325 [Gymnopilus dile... [more]
KIJ38312.16.500e-834.17hypothetical protein M422DRAFT_176749, partial [Sp... [more]
XP_007328436.11.100e-732.52hypothetical protein AGABI1DRAFT_126893 [Agaricus ... [more]
KDR71948.11.100e-730.15hypothetical protein GALMADRAFT_143308 [Galerina m... [more]
CUA70771.11.500e-729.33Ubiquitin carboxyl-terminal hydrolase 34 [Rhizocto... [more]
PIL27027.13.200e-732.81hypothetical protein GSI_10166 [Ganoderma sinense ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR056ncniR056Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G04140.1NO09G04140.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|659400gene_9663Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G04140.1NO09G04140.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G04140 ID=NO09G04140|Name=NO09G04140|organism=Nannochloropsis oceanica|type=gene|length=868bp
CGAATGCTTGCAAAGCGGACGGGAAGATCCGAAGGGAGAGGGCGTGATTC
ACAATTGCCAAGGAATGTGTGGTGATATGTGTTGTGCCTATGACTGGGAA
GTGGGCTTCATGTCGCGTCATCCCCTTAGTAGCGGTGGGAACGTGCAAGA
GGGAGAATGTGGAAGAGAATACGAATTTGATTACAGCCCTCTTGCGTGCG
TGGAATATTATCCAGGAAGAGATGATGGGAAAGTGCAATAAGCGCCTTGG
CGACATGCACCGGCTGGCAACCGATAAAGACAGTAAGCGACTGAAGGCCG
TCATTTCACCCTGAAGCTTATCTTTGGCGGTGTGCACGGTAGCAAGATGG
CCTCCGCCGCTGCTAGCACCATGCTTATTGTCATCTTCCACACACAGCAA
GGCGCCTTCACCCCTTACCACCTCTACCACGACTTCCAACCCACCATCAA
GGCCCTCTTCATAGACGTGACCAAGGAAGTCCTACAACGGGGCCGTGTGG
ACATAAACGTCTTTCTCCTTGGGAGCAACGAGCTGGAGAAGTTGTTTGGC
ATCCTGCGTTCCCTCTTCATCGGCCGTGGTTTTCATTTAAAGGGGCTGGG
AGAGCTAATTGGTGCTACGATAGAAGTTCATAGCATCAAGCAAAGGAACC
CTAATTGGGACAGAGGACAAAGGCGCCTGTCTGCTACCGGAAGCTACGAC
CATACCAGCCTCACCAGCTGGGAGGGAAAGATGTACTTGGAGGGAAGTGT
AGGTGTGGTGCAGTCAGCGCAGTCAGCGCGGAATAATGGCATGGTGCTTG
GCTTGACGTCTTTTGGGGTGCATCCTTATTTTGGGGTCAAGTATCACGAA
GGTGTCACGCGTGTATGA
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protein sequence of NO09G04140.1

>NO09G04140.1-protein ID=NO09G04140.1-protein|Name=NO09G04140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=174bp
MASAAASTMLIVIFHTQQGAFTPYHLYHDFQPTIKALFIDVTKEVLQRGR
VDINVFLLGSNELEKLFGILRSLFIGRGFHLKGLGELIGATIEVHSIKQR
NPNWDRGQRRLSATGSYDHTSLTSWEGKMYLEGSVGVVQSAQSARNNGMV
LGLTSFGVHPYFGVKYHEGVTRV*
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Synonyms
Publications