NO09G04130, NO09G04130 (gene) Nannochloropsis oceanica

Overview
NameNO09G04130
Unique NameNO09G04130
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2636
Alignment locationchr9:1237387..1240022 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:1237387..1240022 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Homology
BLAST of NO09G04130 vs. NCBI_GenBank
Match: XP_016605072.1 (hypothetical protein SPPG_07431 [Spizellomyces punctatus DAOM BR117] >KNC97032.1 hypothetical protein SPPG_07431 [Spizellomyces punctatus DAOM BR117])

HSP 1 Score: 161.8 bits (408), Expect = 3.800e-36
Identity = 95/283 (33.57%), Postives = 145/283 (51.24%), Query Frame = 0
Query:   44 TESPCTHPITIVSAYYPLNVSKHSLEEYSDWMANFFPHVTAPIVLYSLPGEALDHIRSLRGDLPMTVKIQEMWGIPVIKPHRR--EFETRQRDLDPEKYIHNAELYGIWTAKSWMIEQAAIEDLFQSEYFFWVDAGSW--RMGPFANWPNSCKVRQLY--GGNETQGEEII-LASAFST--------KGEP---------FIQGGFFGGTKAAIHWWTAEYYRVFNDRINRKKFAGSDQALMTDIYSRNRNRSILLRSFDVAN--RTLFDPWFFFQPFFAHSA 301
            ++ P   P+TI++A++PL  SKHS   Y+ W+ NF   V+ P+++Y+    A       +G   +T  I +   I  + P+R   +    Q  +DPEK+ H   LY +W AK WM+ QA   + F S YFFWVDAGS+  R  P+  WP+   V +++  GG E +   I+ L +++ +        + EP          I+GG+FGG   AI WW  E+YR+ +      KF G DQ +   I   N  R ++L ++  AN      DPWF FQ + AH +
Sbjct:   69 SQLPSQSPVTIITAFFPLK-SKHSTSSYNQWLRNFMTKVSGPMIVYTTRSYASQIATLRKGFEHLTTVIADFDSIWELPPNRNYSDIYADQHKMDPEKHHHTPSLYAVWAAKLWMVVQATELNPFNSSYFFWVDAGSFRDRAHPYRLWPDPFTVDEIWKGGGPERRKSPIVGLINSWGSLNQFENVHESEPDSLLDQTADRIEGGWFGGPIEAITWWAHEFYRLRDKYAEMGKFIGKDQLVHNAIALLNPQRVLVLETYKNANLPTCKLDPWFAFQNYLAHES 350          
BLAST of NO09G04130 vs. NCBI_GenBank
Match: KZV95184.1 (hypothetical protein EXIGLDRAFT_672376 [Exidia glandulosa HHB12029])

HSP 1 Score: 154.8 bits (390), Expect = 4.600e-34
Identity = 103/313 (32.91%), Postives = 152/313 (48.56%), Query Frame = 0
Query:   47 PCTHPITIVSAYYPLNVSKHSLEEYSDWMANFFPHVTAPIVLYSLPGEALDHIRSLRGDLP--MTVKIQEMWGIPVIKPHRREFETRQRDLDPEKYIHNAELYGIWTAKSWMIEQAAI----EDLFQSEYFFWVDAGSWRM-GPFANWPNSCKVRQLYGGNE----TQGEEIIL----------------ASAFSTKGEPFIQGGFFGGTKAAIHWWTAEYYRVFNDRINRKKFAGSDQALMTDIYSRNRNRSILLRSFDVANRTLFD----PW-----FFFQPFFAHSASIAANVKEGLQLNFTNVWNSHYL 324
            P   PI IV+AYYPL+ SKHSL +Y+ W+ANF   +T  + +++ P E    +R LRG+LP  +    Q +  IP+I P R  FE  Q   DPE + H  +LY IWTAK W + +A      E   + +Y FWVDAGS R    F +WP+  +VR ++   E    T  ++++                 A       +   +G  FGGT  AI WW   Y   F+  ++   F G+DQ LM  ++     R I + + D    T FD    PW     +   P+FA+   +A++ +   + N T +W S  L
Sbjct:   13 PSASPILIVTAYYPLSKSKHSLYQYNLWLANFLSRITTDVYMFT-PPEMEHSLRGLRGNLPIHLNTSFQSIDHIPIISPLRDAFE-EQVAKDPEAWKHVPDLYKIWTAKPWFVHEALANVRREQEGRYQYVFWVDAGSMRQPHAFGHWPSIDRVRSVWADAERLSGTAADDLLFIPMEHAPDVSLVRWTEADGPLRSSKDMSEGSLFGGTPKAIEWWYNTYLAYFHHWLDAGFFVGNDQLLMNALFLLYPARFITVWNRD--PETAFDAGLSPWYGGLGYCGDPWFAYEFFLASDEE---RENMTTMWTSEKL 318          
BLAST of NO09G04130 vs. NCBI_GenBank
Match: KXS14518.1 (hypothetical protein M427DRAFT_70535 [Gonapodya prolifera JEL478])

HSP 1 Score: 154.1 bits (388), Expect = 7.900e-34
Identity = 93/278 (33.45%), Postives = 146/278 (52.52%), Query Frame = 0
Query:   53 TIVSAYYPLNVSKHSLEEYSDWMANFFPHVTAPIVLYSLPGEALDHIRSLRG-DLPMT-VKIQEMWGIPVIKPHRREFETRQRDLDPEKYIHNAELYGIWTAKSWMIEQAAIEDLFQSEYFFWVDAGSWR----MGPFANWPNSCKVRQLYGGNETQ--GEEII---------LASAFSTKGEPFIQGGFFGGT-----KAAIHWWTAEYYRVFNDRINRKK-FAGSDQALMTDIYSRNRNRSILLRSF-DVANR-TLFDPWFFFQPFFAHSASIAAN 306
            TIV+AY+PL  SKHS ++Y+ WM      + AP+V Y+ P   L  ++SLR   LP   V +   W +P IKPHR  +E  Q  +DPE+ IH+ ELY +W AK +M+++A     F +  + WVD GS+R    +G   +WP+  +VR+ +    +    E I+          A +FS+  EP + G    GT       A   + A++Y + +  +++   F G DQ L+  + +RN     +LR   D+ +R    DPWF+FQ +FA  + +  N
Sbjct:   73 TIVTAYFPLQRSKHSTDDYAKWMKPLL-GINAPLVAYTTPA-GLTTMQSLRDPSLPTEYVLLDSPWDLPPIKPHRDAYEKLQHPIDPERGIHSPELYAVWNAKPYMVKEAIRRGTFPAHVYAWVDVGSFREHNLVGDLHDWPDPIRVREAFPHTNSSLLFEHIVHGGTPGLIHQARSFSSSSEPLLVGDIIAGTTFWGPPKAFEAYAADFYALHDRLLSQGGIFVGKDQTLINSLLARNPKTFRVLRCLDDMQDRGACGDPWFYFQKYFALDSELPQN 348          
BLAST of NO09G04130 vs. NCBI_GenBank
Match: KZP28531.1 (hypothetical protein FIBSPDRAFT_852680 [Fibularhizoctonia sp. CBS 109695])

HSP 1 Score: 150.6 bits (379), Expect = 8.700e-33
Identity = 96/317 (30.28%), Postives = 148/317 (46.69%), Query Frame = 0
Query:   52 ITIVSAYYPLNVSKHSLEEYSDWMANFFPHVTAPIVLYSLPGEALDHIRSLRGDLPMTVKIQEM--WGIPVIKPHRREFETRQRDLDPEKYIHNAELYGIWTAKSWMIEQAAIEDLFQSEYFFWVDAGSWRM-GPFANWPNSCKVRQLYGGNE----TQGEEIILASAFSTK--------------GEPFIQGGFFGGTKAAIHWWTAEYYRVFNDRINRKKFAGSDQALMTDIYSRNRNRSILL--------RSFDVANRTL--------------------FDPWFFFQPFFAHSASIAANVKEGLQLNFTNVWN 320
            I +VSA+YP++ SKH++ +YS W+++F   +T PI  ++ P E    IR LRG+LP+T+    +  +  P ++  R ++E   R LD EK  H+ ELY IWTAK + +++       Q EY FW DAGS+R    +  WP++ +V+ ++        T+ E++     F                    F +G FFGGT   I WW   YY   N  + R  F G DQ LM  +   N  R I +        RS DV  R++                     D W+++Q FF  S +    + E     + ++WN
Sbjct:   60 ILLVSAFYPVSKSKHTMGDYSKWLSHFLTPITTPIYFFTTP-EMEPIIRKLRGNLPITINTTYLSAFDTPPLEGMREKYE-EMRKLDREKSRHSTELYSIWTAKPFFLDEGMKNTKGQFEYAFWTDAGSFRKPHQYTAWPDAQRVKDVWAEGSKQSGTRPEDLFFVPVFEPPHGSMQYWNEAMGPVDNEFSEGSFFGGTAHTIRWWQDIYYAYHNAYLARGVFVGKDQTLMNALLMLNPKRIITVWFLDNSPPRSSDVEKRSIGSEDSHSLAKRAETSSLGLCDDVWYYYQ-FFLASKAEQGVMAEQWSREWISLWN 373          
BLAST of NO09G04130 vs. NCBI_GenBank
Match: OXA53919.1 (Protein HtrL [Folsomia candida])

HSP 1 Score: 145.6 bits (366), Expect = 2.800e-31
Identity = 93/291 (31.96%), Postives = 146/291 (50.17%), Query Frame = 0
Query:   52 ITIVSAYYPLNVSKHSLEEYSDWMANFFPHVTAPIVLYSLPGEALDHIRSLRGDLPMTVKI-QEMWGIPVI-KPHRREFETRQ-RDLDPEKYIHNAELYGIWTAKSWMIEQAAIEDLFQSEYFFWVDAGSWR-----MGPFANWPNSCKVRQLYGGNETQGEEIILASAFST------------------KGEPFIQGGFFGGTKAAIHWWTAEYYRVFNDRINRKKFAGSDQALMTDIYSRNRNRSILLRSFDVANRTLFDPWFFFQPFFA--HSASIAANVKEGLQLNF 315
            +TIV+A++    SKHSL+EY  WM NFF  V +P+V+++ P    + +  +R   P+   I  E+W +P + +PH    +  +   LDPE+  H+ ELY  W +K WM++     + F S YF+W+D GS R     +  F N   + +V   +G NE + E     + FS                       F+ GGFFGGT  +I+W+   +Y++ ND ++   F G DQ L   I  RN  R  ++ S +    T  D WF+FQ +++   SA   A+VK  ++  F
Sbjct:   88 VTIVTAFFSAGKSKHSLDEYKSWMKNFFDQVESPVVVFTQP-SMRETMEKMRVGKPIHFLIYDEIWDLPWLNEPHFLYKDYHEINKLDPERAYHSPELYANWNSKPWMLKTVTEINPFNSTYFYWMDIGSVRNPKTKLNKFLNVDRAIEV---FGRNE-RSENYHKLNVFSVANLDDLNLFRDAKTLEEMPNTSFLIGGFFGGTIYSIYWFNDTFYKLHNDWLSDGIFVGKDQVLYNWIAIRNPQRYRVVCSCEQVPWTCDDIWFYFQAWYSGKSSACSTASVKNMVEFLF 373          
BLAST of NO09G04130 vs. NCBI_GenBank
Match: KIO24787.1 (hypothetical protein M407DRAFT_76493 [Tulasnella calospora MUT 4182])

HSP 1 Score: 142.5 bits (358), Expect = 2.400e-30
Identity = 87/278 (31.29%), Postives = 132/278 (47.48%), Query Frame = 0
Query:   49 THPITIVSAYYPLNVSKHSLEEYSDWMANFFPHVTAPIVLYSLPGEALDHIRSLRGDLPMTVKIQEMWGIPVIKPHRREFETRQRD----LDPEKYIHNAELYGIWTAKSWMIEQAAIE-DLFQSEYFFWVDAGSWR-MGPFANWPNSCKVRQLYGG----NETQGEEIILASAFST--------------------------KGEPFIQGGFFGGTKAAIHWWTAEYYRVFNDRINRKKFAGSDQALMTDIYSRNRNRSILLRSFDVANRTLFDPWF 291
            T PI +VSA++PL  SKHS E+Y+ W+  FF  VT PIV+Y+ P +    ++ LRGDLP+T  I   +G P   P     ET   D    LDPE+  HN  LY  W AK+W+++ AA +     +E+ FW DAG+ R    FA+WP+  + R ++        T  +E+     +                            KG+   +G  FGG + A+ WW++ +Y + +  +   KF G DQ +   I   +  + + +   D   R   DP F
Sbjct:   71 TTPIVLVSAFFPLPNSKHSPEDYAAWLKYFFSQVTTPIVVYTTP-DFSPTVQRLRGDLPLT--IDTTFGSPFAVPPLNGLETIYADQHDRLDPERNRHNPGLYATWNAKAWLLQHAAEKYTTNNTEWLFWCDAGALRDSHTFAHWPDLERTRNIFSAAAARTGTPADELFFIPMWGAPSTPATIKKAREWKEDDGPLDLYLMGKGQDLSEGSMFGGKRPAVKWWSSTFYALHDKYLKAGKFVGKDQEIFNSIMFLHPEKIVTVWPRDPLKR--LDPSF 343          
BLAST of NO09G04130 vs. NCBI_GenBank
Match: KZP15542.1 (hypothetical protein FIBSPDRAFT_832721 [Fibularhizoctonia sp. CBS 109695])

HSP 1 Score: 137.5 bits (345), Expect = 7.600e-29
Identity = 83/259 (32.05%), Postives = 129/259 (49.81%), Query Frame = 0
Query:   52 ITIVSAYYPLNVSKHSLEEYSDWMANFFPHVTAPIVLYSLPGEALDHIRSLRGDLPMTVKIQEM--WGIPVIKPHRREFETRQRDLDPEKYIHNAELYGIWTAKSWMIEQAAIEDLFQS--EYFFWVDAGSWRM-GPFANWPNSCKVRQLYGGNETQ----GEEIILASAFSTK--------------GEPFIQGGFFGGTKAAIHWWTAEYYRVFNDRINRKKFAGSDQALMTDIYSRNRNRSILLRSFDVANRTLFD 288
            I +VSA+YPL+ SKHS+ +YS W+++F   +T PI  ++ P E    IR LRG LP+T+    +  +  P ++  R +++   + LD E+  H+ ELY IW AK + +++       +   EY FW DAGS+R    +  WP++ +V++++     Q     E++     +ST                  F +G FFGG+   I WW  EYY   N  + R  F G DQ LM  +   N  R I +   D A  +  D
Sbjct:   66 ILLVSAFYPLSKSKHSMGDYSKWLSHFLTQITTPIYFFTTP-EMEPIIRQLRGKLPITINTTYLSAFDTPPLEGMRDKYKEIWK-LDREQSRHSPELYSIWAAKPFFLDEGMKNSNTEGRFEYAFWTDAGSFRKPHQYTAWPDAKRVKEVWMEGSRQSGMWAEDLFFVPIWSTPDGSMVHWNEEMGPVDNNFSEGSFFGGSATTIRWWRDEYYAYHNAYLARGIFIGKDQTLMNALLMLNPERIITVWFLDWARHSSDD 322          
BLAST of NO09G04130 vs. NCBI_GenBank
Match: KIK05858.1 (hypothetical protein K443DRAFT_328132 [Laccaria amethystina LaAM-08-1])

HSP 1 Score: 131.7 bits (330), Expect = 4.200e-27
Identity = 97/305 (31.80%), Postives = 145/305 (47.54%), Query Frame = 0
Query:    4 RQSIFSLVVLIILLTAFFQASQLEQTIPIRQYQRNDSSLRTESPCTHPITIVSAYYPLNVSKHSLEEYSDWMANFFPHVTAPIVLYSLPGEALDHIRSLRG-DLPMTVKIQEMWGIPVIKPHRREFETRQRDL---DPEKYIHNAELYGIWTAKSWMIEQAAIEDLFQS-----EYFFWVDAGSWRM-GPFANWPNSCKVRQLY-GGNETQG----EEIIL--------ASA---FSTKGE---PFIQGGFFGGTKAAIHWWTAEYYRVFNDRINRKKFAGSDQALMTDIYSRNRNRSILLRSFD 280
            R+ I  +  L++LL   F   Q   T+ I             +  T  + +VSA +PL  SKHS E Y+DW+  F   +T  I  Y+ P E  + +R+ RG  LP+T+     +  P   P  R FE    ++   D EK  H+ ELY +W AK W ++  A++ L +      +Y FWVDAGS+R    + +WPN  KV Q++  G    G    E+++         ASA      KG     F +G FFGG+ A+I WW+  YY   N  +    F G DQ L+  ++    +R I +  +D
Sbjct:   10 RKRIICIYFLLMLLIFDFLLHQYGATVIIDDIPPTPELKNDGNGNTTRVLLVSALFPLTKSKHSKEGYNDWLRRFLGPITTNIYFYTTP-ELEETVRAARGPGLPITINTH--YASPFAIPPLRGFEPLYEEMHLQDREKERHSPELYAVWNAKPWFLDH-AVQRLREEKGEVYDYAFWVDAGSFRQEHRYTSWPNPAKVEQVWEEGRRLNGVKRKEDLLFFPIQTLPPASARDWMQDKGPLDVDFSKGSFFGGSPASISWWSNAYYAYHNYYLTLGLFVGKDQTLINALFLLFPDRFITVWMYD 310          
BLAST of NO09G04130 vs. NCBI_GenBank
Match: XP_001881517.1 (predicted protein [Laccaria bicolor S238N-H82] >EDR07728.1 predicted protein [Laccaria bicolor S238N-H82])

HSP 1 Score: 130.2 bits (326), Expect = 1.200e-26
Identity = 90/304 (29.61%), Postives = 142/304 (46.71%), Query Frame = 0
Query:    4 RQSIFSLVVLIILLTAFFQASQLEQTIPIRQYQRNDSSLRTESPCTHPITIVSAYYPLNVSKHSLEEYSDWMANFFPHVTAPIVLYSLPGEALDHIRSLRGD-LPMTVKIQEMWGIPVIKPHRREFETRQRDL---DPEKYIHNAELYGIWTAKSWMIEQAAIEDLFQS----EYFFWVDAGSWRMGP-FANWPNSCKVRQLY-GGNETQG----EEIIL--------ASA---FSTKGE---PFIQGGFFGGTKAAIHWWTAEYYRVFNDRINRKKFAGSDQALMTDIYSRNRNRSILLRSFD 280
            R+    + VL++L  + F   Q   T+ +             +     + +VSA +PL  SKHS +EY+DW+  F   +T  I  Y+ P E  + +R+ RG  LP+T+     +  P   P  R FE    ++   D EK  H+ ELY +W  K W ++ A  +   +     +Y FW+DAGS+R    + +WPN  +V Q++  G    G    E+++         ASA      KG     F +G FFGG+ A+I WW+  YY   N  +    F G DQ L+  ++    +R I +  +D
Sbjct:   72 RKRTICISVLLMLFISDFLLHQYNTTVIVDDIPPTSELKNHGNGNVTRVLLVSALFPLTKSKHSNDEYNDWLQRFLGPITTDIYFYTTP-ELENTVRAARGSGLPITINTH--YASPFAIPPLRGFEPLYEEMHLQDREKKRHSPELYAVWNGKPWFLDHAVQQSREEKGEVYDYAFWIDAGSFRQEHWYTSWPNPARVEQVWEEGRRLNGVKRKEDLLFFPIQTLPPASARDWMQDKGPLDVDFSEGSFFGGSPASISWWSTAYYAYHNYYLTLGLFVGKDQTLINALFLLFPDRFITVWMYD 372          
BLAST of NO09G04130 vs. NCBI_GenBank
Match: EJD39629.1 (hypothetical protein AURDEDRAFT_116067 [Auricularia subglabra TFB-10046 SS5])

HSP 1 Score: 130.2 bits (326), Expect = 1.200e-26
Identity = 87/279 (31.18%), Postives = 134/279 (48.03%), Query Frame = 0
Query:   41 SLRTESPCTHP------ITIVSAYYPLNVSKHSLEEYSDWMANFFPHVTAPIVLYSLPGEALDH-IRSLRGDLPMTVK--IQEMWGIPVIKPHRREFETRQRDLDPEKYIHNAELYGIWTAKSWMIEQAA--IEDLF----------------QSEYFFWVDAGSWR-MGPFANWPNSCKVRQLYG-GNETQG---EEIILASAFSTKGE--------------PFIQGGFFGGTKAAIHWWTAEYYRVFNDRINRKKFAGSDQALMTDIYSRNRNRSI 274
            SLR  +P   P      + +VSAY+P   +KHS +EY+ W+A+F   V+A +  Y+ P   ++H +R+LRG LP+ V    + +W + + K  R++ E R  D+D EK  HN  LY IW AK +   +A   ++ L+                + +Y FWVD GS+R   PF +WP+  +V +++  G    G   ++++L     T  E                 +G FFGG   A+ WW   Y   F    +R  F G DQ LM  +    R+R I
Sbjct:   49 SLRLATPGGPPDAPAERVLLVSAYFPFPSAKHSQDEYNAWLAHFLGAVSADLYFYTPPD--MEHTVRTLRGGLPIVVNTHYKSIWDVDMFKGRRKQME-RMHDMDREKGWHNPNLYAIWAAKPFFANEAIRHVDQLYFRHAQGPPPGFVHLGRRYKYVFWVDCGSFRGPHPFRHWPSVPRVDEVFAQGARLSGAPEDKLVLVPIQWTPPEHTRHWNESMGPIDIDLSEGSFFGGHPDAVQWWYRAYLTYFTHYSDRGMFVGKDQTLMNSLLYLFRDRII 324          
The following BLAST results are available for this feature:
BLAST of NO09G04130 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_016605072.13.800e-3633.57hypothetical protein SPPG_07431 [Spizellomyces pun... [more]
KZV95184.14.600e-3432.91hypothetical protein EXIGLDRAFT_672376 [Exidia gla... [more]
KXS14518.17.900e-3433.45hypothetical protein M427DRAFT_70535 [Gonapodya pr... [more]
KZP28531.18.700e-3330.28hypothetical protein FIBSPDRAFT_852680 [Fibularhiz... [more]
OXA53919.12.800e-3131.96Protein HtrL [Folsomia candida][more]
KIO24787.12.400e-3031.29hypothetical protein M407DRAFT_76493 [Tulasnella c... [more]
KZP15542.17.600e-2932.05hypothetical protein FIBSPDRAFT_832721 [Fibularhiz... [more]
KIK05858.14.200e-2731.80hypothetical protein K443DRAFT_328132 [Laccaria am... [more]
XP_001881517.11.200e-2629.61predicted protein [Laccaria bicolor S238N-H82] >ED... [more]
EJD39629.11.200e-2631.18hypothetical protein AURDEDRAFT_116067 [Auriculari... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR056ncniR056Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G04130.1NO09G04130.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G04130.1NO09G04130.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G04130 ID=NO09G04130|Name=NO09G04130|organism=Nannochloropsis oceanica|type=gene|length=2636bp
TGGTCATTTAACTGGAAAATTGTTGCGGAAATATTTTTTTTTAAAATATT
CAACTATATATATATACGGACTTCCGTTCGGATCATGTTTTTGTTTGTTC
TTTGTTGAGTGGTTGTTATCACACGTCCGACCAATTTTGGACGAATAAGG
CCCTGCAAATGAATACATTCGTTCTTTCGTCGCTTCGTACGCATTTTGTG
GCGGCGGACGAAGTTACGTCGTCATTTCGTACACAAAAACGTGGGCAGCA
CGAAGTAACGGTCGTCACCTCGCACATAATTTGTAGAACCCCATGAAGTT
ACTTCATCGCACCATGTTCCACTGGGTGGTAAAGACGAAGACGAGCAACT
GGAGCGTGCACCAGGCCCGTACAAAAACACTCTAGGCCAAATGCATATTT
GGTGGAGAAAGGGCACGTATTTACCTGATTTCTTTTCGATACCCGACTTG
TTATGTGGCAATTTGTTCGCAAACGGAATACTGAACAGAAGCTCAGAGTG
AGCGTTTCGACTCTTTTTTCCCTTTATCACTGCCATTACTTCCCAAGCAC
GTTCGCGTCAACAGCTTGGCCCAGAGGTAATTAAAATAATTTTGGCCCAC
TTGCCCTCTTGTTTTGCCAAAGTATACCCTCTACTGCACGATAAACACAC
GCCCTTGCCACTTACACTCACCCACAAAACCGCAGAACCAACACATGCCC
ATAAAATAGAAGGGAAAATAACCGAATATTTTGTTGGGGCGTATTGTAGA
CTGAGGAACATAAACGTGTGAAGATTAAGAACTTCTTCTGAAATCGTTAG
GCTTGTAATGGTGCCACCAAGCCCAAACAAAAGACCTGGAGCACTATCCT
ATTGCATAATCAAACAGAATTGATATTATTGCGCGAGCCCTCAATCATCT
GCAAAGCATCAAATATAGGAAATGTCATCGCGGCAAAGCATCTTCTCACT
TGTGGTGCTGATAATTTTATTGACCGCCTTCTTTCAAGCGTCGCAATTGG
AGCAAACAATTCCTATCCGTCAATATCAAAGAAATGATTCGTCACTGCGA
ACGGAAAGTCCCTGTACGCATCCCATTACAATCGTTTCAGCGTACTACCC
ACTAAATGTATCGAAGCATTCCTTGGAAGAGTATAGCGACTGGATGGCAA
ACTTTTTTCCGCATGTTACCGCGCCCATTGTCTTATATTCACTCCCTGGC
GAGGCCCTCGATCATATTCGCAGCTTGCGCGGGGACCTACCTATGACTGT
CAAGgtaaataatctatataaagtcttgacatactgctctgatgacgtgg
gtttcaccacttcggcacaaaccctatcagATTCAAGAGATGTGGGGAAT
TCCTGTAATCAAGCCCCATCGCAGGGAATTTGAAACTCGGCAACGCGATC
TAGATCCTGAAAAATACATACATAATGCCGAGCTCTATGGCATATGGACG
GCCAAATCCTGGATGATTGAGCAAGCGGCGATAGAAGATTTATTTCAGAG
CGAGTACTTCTTCTGGGTCGATGCAGGATCTTGGAGgtaagggattaagg
gcgcatgttctcttctgtaccatacacgtatctacaaactgagggtgaca
tcttcttttctcctcttgacaacataaagAATGGGGCCATTCGCAAATTG
GCCCAACAGCTGCAAAGTAAGGCAACTCTACGGGGGAAATGAAACACAAG
GGGAAGAAATTATTCTGGCGAGCGCGTTCTCAACTAAGgtaatgcacatt
tggcggggaaacaggttaaatagaaagagtttgacaaggctggtggttta
ccgttccctgacagGGGGAGCCATTTATTCAGGGCGGGTTTTTTGGTGGG
ACCAAGgtaagcggtacggatggggcatcaagacatttattccgggcgtg
tgcctgcaggctcactatttacaagcacaatttgacactaatagtgacac
ccgaaacagGCCGCTATTCATTGGTGGACAGCTGAATATTATCGAGTTTT
CAACGACCGGATAAATAGGAAAAAATTCGCAGgtattttcaaagcgagat
gtactaggttcgacgggctatgaagtattttgacttacatactgccattt
tacattttcagGTAGTGATCAAGCGCTCATGACAGACATCTACAGCCGAA
ACCGCAACCGGAGCATCTTGCTTCGAAGTTTTGgtacggtaatggttggc
cttcttcaagcatgttgatatatgcgatcttattctatctctattttgac
ctacagATGTAGCAAACAGGACGCTTTTCGACCCATGGTTCTTTTTCCAG
CCCTTCTTTGCACATTCTGCCTCCATTGCTGCTAATGTGAAGGAGGGTTT
GCAGCTTAATTTTACGAATGTCTGGAATTCACATTATTTGGTTCCACCAA
TAAAAGAATCGACTACGGACAGTGGTTTTTAAAGACAAGTATCTCGAATA
CTCAAAACGCTGGTGTAGGTTTACCTATTTTTGGACTCGGAAACTGATCT
TCCCGGGCACTTTATCTGGACTATACAGAAATATATTTAAGTTTTTCTAT
TGTTTTGATTTTTTAGGGGTTTATTCGCCTCTAGGTGCTTTGCCGCCGGC
ATGATGACATCTACTTCTATCATATTTTGAGCACCA
back to top

protein sequence of NO09G04130.1

>NO09G04130.1-protein ID=NO09G04130.1-protein|Name=NO09G04130.1|organism=Nannochloropsis oceanica|type=polypeptide|length=337bp
MSSRQSIFSLVVLIILLTAFFQASQLEQTIPIRQYQRNDSSLRTESPCTH
PITIVSAYYPLNVSKHSLEEYSDWMANFFPHVTAPIVLYSLPGEALDHIR
SLRGDLPMTVKIQEMWGIPVIKPHRREFETRQRDLDPEKYIHNAELYGIW
TAKSWMIEQAAIEDLFQSEYFFWVDAGSWRMGPFANWPNSCKVRQLYGGN
ETQGEEIILASAFSTKGEPFIQGGFFGGTKAAIHWWTAEYYRVFNDRINR
KKFAGSDQALMTDIYSRNRNRSILLRSFDVANRTLFDPWFFFQPFFAHSA
SIAANVKEGLQLNFTNVWNSHYLVPPIKESTTDSGF*
back to top
Synonyms
Publications