NO09G04090, NO09G04090 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO09G04090 vs. NCBI_GenBank
Match: OXA61706.1 (Failed axon connections [Folsomia candida]) HSP 1 Score: 157.9 bits (398), Expect = 2.900e-35 Identity = 86/166 (51.81%), Postives = 110/166 (66.27%), Query Frame = 0 Query: 1 MNPSGFSLHQLRLKVGIPIIVLRNVNPAQGLANGTRLLILYLSLRVIQAKVLTGSQVGQVVCLPRINMDTNDDTKGVPFIRRRRQYPVRPAFAMTKNKSQGQTFQKVAFYLPPPSFARGQLYVALSRVGDFTNITMMVTHPPLHG---QPPPALATPNVVYKQVFM 164 +NPSG H+L+LKVG II+LRN+N +GL NGTRL+++ L +I AKVLTGS G +V +PRI++ TN D +PF +RRQ+PV+ AFAMT NKSQGQT KV YLP P F+ GQLYVA SRV ++ + V G Q + TPNVVYK + M Sbjct: 1062 LNPSGMPPHELKLKVGALIILLRNLNTKRGLCNGTRLVVVELKTNLILAKVLTGSSEGNIVFIPRIDLTTNSD---LPFTLKRRQFPVKRAFAMTINKSQGQTLDKVGIYLPNPVFSHGQLYVAFSRVRRSCDVKVYVVDTIEQGKLIQGSNVVFTPNVVYKAILM 1224
BLAST of NO09G04090 vs. NCBI_GenBank
Match: OMO58887.1 (hypothetical protein CCACVL1_25279 [Corchorus capsularis]) HSP 1 Score: 153.3 bits (386), Expect = 7.300e-34 Identity = 80/164 (48.78%), Postives = 111/164 (67.68%), Query Frame = 0 Query: 1 MNPSGFSLHQLRLKVGIPIIVLRNVNPAQGLANGTRLLILYLSLRVIQAKVLTGSQVGQVVCLPRINMDTNDDTKGVPFIRRRRQYPVRPAFAMTKNKSQGQTFQKVAFYLPPPSFARGQLYVALSRVGDFTNITMMVTH--PPLHGQPPPALATPNVVYKQVF 163 M SG H+L+LK+G PI++LRN+N + GL NGTRL++ +++ +V+ AKV+TGS G VC+PRI M ND+ +PFI +RRQ+PVR FAMT NKSQGQT ++V YLP P F+ GQLYVA+SRV + +++ + L G T N+VY +VF Sbjct: 1432 MKFSGVPNHELKLKIGAPIMLLRNINQSLGLCNGTRLIVTHITAKVLGAKVITGSHCGSKVCIPRIRMLVNDER--LPFIFQRRQFPVRLCFAMTINKSQGQTLKQVGLYLPQPVFSHGQLYVAISRVTSREGLKILIVNESSDLDGY------TKNIVYNEVF 1587
BLAST of NO09G04090 vs. NCBI_GenBank
Match: XP_009145634.2 (PREDICTED: uncharacterized protein LOC103869326 [Brassica rapa]) HSP 1 Score: 152.9 bits (385), Expect = 9.500e-34 Identity = 85/159 (53.46%), Postives = 106/159 (66.67%), Query Frame = 0 Query: 4 SGFSLHQLRLKVGIPIIVLRNVNPAQGLANGTRLLILYLSLRVIQAKVLTGSQVGQVVCLPRINMDTNDDTKGVPFIRRRRQYPVRPAFAMTKNKSQGQTFQKVAFYLPPPSFARGQLYVALSRVGDFTNITMMVTHPPLHGQPPPALATPNVVYKQVF 163 SG H L+LK+G PI++LRN++P GL NGTRLL+ L+ VIQAK +TG +VGQ V LPR M + PF RRRQ+PV AFAMT NKSQGQT QKV YLP P F+ GQLYVA+SRV T + +++T + P +T NVVYK+VF Sbjct: 1359 SGLPNHDLKLKIGAPIMLLRNIDPKGGLCNGTRLLVTQLANHVIQAKFITGDKVGQNVLLPR--MFVSPPEARFPFRMRRRQFPVALAFAMTINKSQGQTLQKVGLYLPRPVFSHGQLYVAVSRVTSRTGLKILITDE----KGNPQKSTMNVVYKEVF 1511
BLAST of NO09G04090 vs. NCBI_GenBank
Match: XP_002998261.1 (helitron helicase-like protein [Phytophthora infestans T30-4] >EEY70607.1 helitron helicase-like protein [Phytophthora infestans T30-4]) HSP 1 Score: 152.5 bits (384), Expect = 1.200e-33 Identity = 79/162 (48.77%), Postives = 108/162 (66.67%), Query Frame = 0 Query: 1 MNPSGFSLHQLRLKVGIPIIVLRNVNPAQGLANGTRLLILYLSLRVIQAKVLTGSQVGQVVCLPRINMDTNDDTKGVPFIRRRRQYPVRPAFAMTKNKSQGQTFQKVAFYLPPPSFARGQLYVALSRVGDFTNITMMVTHPPLHGQPPPALATPNVVYKQVF 163 MN SG H+L LKVG+PI+++RN+NP GL NGTRL I+ L VI A ++TG + GQ V +PRI ++ D + PF RR+Q+PV+PAFAMT NK+QGQT Q + YL P F+ GQLYVA+SRV + +V +P L + + T N+VY+Q+F Sbjct: 1606 MNISGMPPHKLTLKVGMPIMMMRNLNPDLGLCNGTRLRIVALKPHVIHATIMTGERQGQHVLIPRIVFISDGDIRSFPFHLRRKQFPVQPAFAMTINKAQGQTVQYLGLYLATPCFSHGQLYVAMSRVTSRSRFKALVEYPKL--EQEDGVYTQNIVYRQIF 1765
BLAST of NO09G04090 vs. NCBI_GenBank
Match: XP_021966683.1 (ATP-dependent DNA helicase PIF1-like [Folsomia candida]) HSP 1 Score: 152.5 bits (384), Expect = 1.200e-33 Identity = 83/174 (47.70%), Postives = 112/174 (64.37%), Query Frame = 0 Query: 1 MNPSGFSLHQLRLKVGIPIIVLRNVNPAQGLANGTRLLILYLSLRVIQAKVLTGSQVGQVVCLPRINMDTNDDTKGVPFIRRRRQYPVRPAFAMTKNKSQGQTFQKVAFYLPPPSFARGQLYVALSRVGDFTNITMMVTHPPLHG---QPPPALATPNVVYKQVFMYMKPPQSP 172 + PSG +H+L LK G +++LRN+N +GL NGTRL++ L +I AKVLTGS Q+V +PRI++ T + + PF+ RRRQ+P++ AFAMT NKSQGQT KV YLP P F+ GQLYVALSRV F + + + P G + + T NVVYK++F P SP Sbjct: 164 LTPSGMPVHKLNLKKGSNVMLLRNLNTKRGLCNGTRLIVEDLKPNLIIAKVLTGSAQQQIVFIPRIDLATTN--QDYPFVLRRRQFPIKLAFAMTINKSQGQTLDKVGVYLPEPVFSHGQLYVALSRVRRFADAKIKIIDGPEQGKLIEGSDRMFTKNVVYKEIFSNQLEPDSP 335
BLAST of NO09G04090 vs. NCBI_GenBank
Match: XP_022549569.1 (uncharacterized protein LOC106398326 [Brassica napus]) HSP 1 Score: 152.1 bits (383), Expect = 1.600e-33 Identity = 78/168 (46.43%), Postives = 115/168 (68.45%), Query Frame = 0 Query: 4 SGFSLHQLRLKVGIPIIVLRNVNPAQGLANGTRLLILYLSLRVIQAKVLTGSQVGQVVCLPRINMDTNDDTKGVPFIRRRRQYPVRPAFAMTKNKSQGQTFQKVAFYLPPPSFARGQLYVALSRVGDFTNITMMVTHPPLHGQPPPALATPNVVYKQVFMYMKPPQSP 172 SG H+L LKVG P+++LRN+N +GL NGTR+++ ++ RV++A+++TGS +G+ V +PRI + D+TK +PF RRRQ+P+R +AMT NKSQGQ+ ++V YLP P F+ GQLYVALSRV +T++ T + P L N+VYK++F + P SP Sbjct: 1178 SGLPSHKLTLKVGAPVMLLRNINQKKGLCNGTRMILTHVGERVLKAEIITGSHIGEEVLIPRIVL-LYDETK-LPFTLRRRQFPIRLCYAMTINKSQGQSLKQVILYLPKPVFSHGQLYVALSRVTSKAGLTIIKT------EDPHQLKVKNIVYKEIFKGLHPETSP 1337
BLAST of NO09G04090 vs. NCBI_GenBank
Match: XP_002905600.1 (helitron helicase-like protein [Phytophthora infestans T30-4] >EEY68441.1 helitron helicase-like protein [Phytophthora infestans T30-4]) HSP 1 Score: 151.0 bits (380), Expect = 3.600e-33 Identity = 78/162 (48.15%), Postives = 107/162 (66.05%), Query Frame = 0 Query: 1 MNPSGFSLHQLRLKVGIPIIVLRNVNPAQGLANGTRLLILYLSLRVIQAKVLTGSQVGQVVCLPRINMDTNDDTKGVPFIRRRRQYPVRPAFAMTKNKSQGQTFQKVAFYLPPPSFARGQLYVALSRVGDFTNITMMVTHPPLHGQPPPALATPNVVYKQVF 163 MN SG H+L LKVG+PI+++RN+NP GL NGTRL I+ L VI A ++TG + GQ V +PRI ++ D + PF RR+Q+PV+PAFAMT NK+QGQT Q + YL P F+ GQLYVA+SRV + +V +P L + + N+VY+Q+F Sbjct: 1583 MNISGMPPHKLTLKVGMPIMMMRNLNPDLGLCNGTRLRIVALKPHVIHATIMTGERQGQHVLIPRIVFISDGDIRSFPFHLRRKQFPVQPAFAMTINKAQGQTVQHLGLYLATPCFSHGQLYVAMSRVTSRSRFKALVEYPKL--EEEDGVYAQNIVYRQIF 1742
BLAST of NO09G04090 vs. NCBI_GenBank
Match: XP_002904030.1 (helitron helicase-like protein [Phytophthora infestans T30-4] >EEY54208.1 helitron helicase-like protein [Phytophthora infestans T30-4]) HSP 1 Score: 150.6 bits (379), Expect = 4.700e-33 Identity = 78/162 (48.15%), Postives = 107/162 (66.05%), Query Frame = 0 Query: 1 MNPSGFSLHQLRLKVGIPIIVLRNVNPAQGLANGTRLLILYLSLRVIQAKVLTGSQVGQVVCLPRINMDTNDDTKGVPFIRRRRQYPVRPAFAMTKNKSQGQTFQKVAFYLPPPSFARGQLYVALSRVGDFTNITMMVTHPPLHGQPPPALATPNVVYKQVF 163 MN SG H+L LKVG+PI+++RN+NP GL NGTRL I+ L VI A ++TG + GQ V +PRI ++ D + PF RR+Q+PV+PAFAMT NK+QGQT Q + YL P F+ GQLYVA+SRV + +V +P L + + N+VY+Q+F Sbjct: 1583 MNISGMPPHKLTLKVGMPIMMMRNLNPDLGLCNGTRLRIVALKPHVIHATIMTGERQGQHVLIPRIVFISDGDIRSFPFHLRRKQFPVQPAFAMTINKAQGQTVQYLGLYLATPCFSHGQLYVAMSRVTSRSRFKALVEYPKL--EEEDGVYAQNIVYRQIF 1742
BLAST of NO09G04090 vs. NCBI_GenBank
Match: XP_002895495.1 (helitron helicase-like protein [Phytophthora infestans T30-4] >EEY56272.1 helitron helicase-like protein [Phytophthora infestans T30-4]) HSP 1 Score: 150.6 bits (379), Expect = 4.700e-33 Identity = 78/162 (48.15%), Postives = 107/162 (66.05%), Query Frame = 0 Query: 1 MNPSGFSLHQLRLKVGIPIIVLRNVNPAQGLANGTRLLILYLSLRVIQAKVLTGSQVGQVVCLPRINMDTNDDTKGVPFIRRRRQYPVRPAFAMTKNKSQGQTFQKVAFYLPPPSFARGQLYVALSRVGDFTNITMMVTHPPLHGQPPPALATPNVVYKQVF 163 MN SG H+L LKVG+PI+++RN+NP GL NGTRL I+ L VI A ++TG + GQ V +PRI ++ D + PF RR+Q+PV+PAFAMT NK+QGQT Q + YL P F+ GQLYVA+SRV + +V +P L + + N+VY+Q+F Sbjct: 1627 MNISGMPPHKLTLKVGMPIMMMRNLNPDLGLCNGTRLRIVALKPHVIHATIMTGERQGQHVLIPRIVFISDGDIRSFPFHLRRKQFPVQPAFAMTINKAQGQTVQYLGLYLATPCFSHGQLYVAMSRVTSRSRFKALVEYPKL--EEEDGVYAQNIVYRQIF 1786
BLAST of NO09G04090 vs. NCBI_GenBank
Match: XP_002908098.1 (helitron helicase-like protein [Phytophthora infestans T30-4] >EEY61181.1 helitron helicase-like protein [Phytophthora infestans T30-4]) HSP 1 Score: 150.6 bits (379), Expect = 4.700e-33 Identity = 78/162 (48.15%), Postives = 107/162 (66.05%), Query Frame = 0 Query: 1 MNPSGFSLHQLRLKVGIPIIVLRNVNPAQGLANGTRLLILYLSLRVIQAKVLTGSQVGQVVCLPRINMDTNDDTKGVPFIRRRRQYPVRPAFAMTKNKSQGQTFQKVAFYLPPPSFARGQLYVALSRVGDFTNITMMVTHPPLHGQPPPALATPNVVYKQVF 163 MN SG H+L LKVG+PI+++RN+NP GL NGTRL I+ L VI A ++TG + GQ V +PRI ++ D + PF RR+Q+PV+PAFAMT NK+QGQT Q + YL P F+ GQLYVA+SRV + +V +P L + + N+VY+Q+F Sbjct: 1629 MNISGMPPHKLTLKVGMPIMMMRNLNPDLGLCNGTRLRIVALKPHVIHATIMTGERQGQHVLIPRIVFISDGDIRSFPFHLRRKQFPVQPAFAMTINKAQGQTVQYLGLYLATPCFSHGQLYVAMSRVTSRSRFKALVEYPKL--EEEDGVYAQNIVYRQIF 1788 The following BLAST results are available for this feature:
BLAST of NO09G04090 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO09G04090 ID=NO09G04090|Name=NO09G04090|organism=Nannochloropsis oceanica|type=gene|length=546bpback to top protein sequence of NO09G04090.1 >NO09G04090.1-protein ID=NO09G04090.1-protein|Name=NO09G04090.1|organism=Nannochloropsis oceanica|type=polypeptide|length=182bpback to top Synonyms
Publications
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