NO09G03930, NO09G03930 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO09G03930 vs. NCBI_GenBank
Match: XP_005853966.1 (retinol dehydrogenase 14 [Nannochloropsis gaditana CCMP526] >EKU22391.1 retinol dehydrogenase 14 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 318.9 bits (816), Expect = 1.500e-83 Identity = 166/261 (63.60%), Postives = 195/261 (74.71%), Query Frame = 0 Query: 1 MATNHLGPFLLTSLLMPALKATGRGEGSPARVIMVSSRLERGKAGYLNAWMRDPTLAPSEXXXXXXXXXXXXXXXXXXXXXXXXXPPYKPFLAYGASKLANMLMVTHLNRQRQGWALPDHAHHPPSSFTXXXXXXXXXXXQGQRWDPSDDHLCVYGCSPGMVHTSLNRALAPALLRFIFWPLSYSLLQSPYEGARPVVFLASSERVEGRGGGFWVI-GRKEGERKGEK--EVVEVASSPEAEDTVLAHRLWSRCEEMVAPF 259 MATNHLGPFLLT+LL+P LK TGR EG P+RV+MVSSRLE+GK YL+ W+RDPTL P+E PPY+PFLAYGASKLAN+L VT+L+RQ+QGW+LPD H P XXXXXX RWDPSD H+ VYGC+PGMVHT+LNR+L P +R +FWPLSYSLLQ+P+EGARPVVFLA+S+RVEGRGGGFW + RK+ E + EK +VVEVASSPEAED VLAH+LW RCEEMVAPF Sbjct: 201 MATNHLGPFLLTALLLPTLKETGRAEGRPSRVVMVSSRLEKGKGEYLDCWVRDPTLTPAE--------DQDPKEEGEEEGGPVASPPYRPFLAYGASKLANLLAVTYLHRQQQGWSLPDATHQP---XXXXXXXXLLLGPSTHRWDPSDQHVSVYGCTPGMVHTALNRSLLPGFVRVLFWPLSYSLLQTPFEGARPVVFLAASDRVEGRGGGFWALEARKKEEERREKGWDVVEVASSPEAEDIVLAHKLWVRCEEMVAPF 450
BLAST of NO09G03930 vs. NCBI_GenBank
Match: EWM27409.1 (retinol dehydrogenase 14 [Nannochloropsis gaditana]) HSP 1 Score: 301.2 bits (770), Expect = 3.200e-78 Identity = 158/253 (62.45%), Postives = 187/253 (73.91%), Query Frame = 0 Query: 1 MATNHLGPFLLTSLLMPALKATGRGEGSPARVIMVSSRLERGKAGYLNAWMRDPTLAPSEXXXXXXXXXXXXXXXXXXXXXXXXXPPYKPFLAYGASKLANMLMVTHLNRQRQGWALPDHAHHPPSSFTXXXXXXXXXXXQGQRWDPSDDHLCVYGCSPGMVHTSLNRALAPALLRFIFWPLSYSLLQSPYEGARPVVFLASSERVEGRGGGFWVI-GRKEGERKGEK--EVVEVASSPEAEDTVLAHRLWSR 251 MATNHLGPFLLT+LL+P LK TGR EG P+RV+MVSSRLE+GK YL+ W+RDPTL P+E PPY+PFLAYGASKLAN+L VT+L+RQ+QGW+LPD H P XXXXXX RWDPSD H+ VYGC+PGMVHT+LNR+L P +R +FWPLSYSLLQ+P+EGARPVVFLA+S+RVEGRGGGFW + RK+ E + EK +VVEVASSPEAED VLAH+LW R Sbjct: 201 MATNHLGPFLLTALLLPTLKETGRAEGRPSRVVMVSSRLEKGKGEYLDCWVRDPTLTPAE--------DQDPKEEGEEEGGPVASPPYRPFLAYGASKLANLLAVTYLHRQQQGWSLPDATHQP---XXXXXXXXLLLGPSTHRWDPSDQHVSVYGCTPGMVHTALNRSLLPGFVRVLFWPLSYSLLQTPFEGARPVVFLAASDRVEGRGGGFWALEARKKEEERREKGWDVVEVASSPEAEDIVLAHKLWVR 442
BLAST of NO09G03930 vs. NCBI_GenBank
Match: XP_004339157.1 (WW domain containing oxidoreductase [Acanthamoeba castellanii str. Neff] >ELR17144.1 WW domain containing oxidoreductase [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 75.1 bits (183), Expect = 3.700e-10 Identity = 72/257 (28.02%), Postives = 99/257 (38.52%), Query Frame = 0 Query: 2 ATNHLGPFLLTSLLMPALKATGRGEGSPARVIMVSSRLERGKAGYLNAWMRDPTLAPSEXXXXXXXXXXXXXXXXXXXXXXXXXPPYKPFLAYGASKLANMLMVTHLNRQRQGWALPDHAHHPPSSFTXXXXXXXXXXXQGQRWDPSDDHLCVYGCSPGMVHTSLNRALAPALLRFIFWPLSYSLLQSPYEGARPVVFLASSERVEGRGGGFWVIGRKEGERKGEKEVVEVASSPEAEDTVLAHRLWSRCEEMVAPF 259 ATNHLG F LT+LL+ L A+ SPAR+++VSS + G LN ++ + P YG SKL N+L HLN+ + + H+ + PG V+T L R P L +I P+S +SP EGAR V+ A S VEG GG ++ R+E + P A D A LW+ EE+V F Sbjct: 107 ATNHLGHFFLTTLLLDTLAAS-----SPARIVVVSSEAHK-FCGPLNEDLKLVSDPPEFGLK-------------------------SAMSLYGVSKLCNLLFTLHLNKLLK---------------------------------EKESHVSINAVHPGTVNTELGRE-TPWYLSWIVKPISQLFFRSPEEGARTSVYCAVSPEVEGVGGKYFSNEREEKPK------------PYAVDEATAAALWAYSEELVKDF 286
BLAST of NO09G03930 vs. NCBI_GenBank
Match: ORY94838.1 (short-chain dehydrogenase/reductase SDR [Syncephalastrum racemosum]) HSP 1 Score: 73.2 bits (178), Expect = 1.400e-9 Identity = 71/255 (27.84%), Postives = 98/255 (38.43%), Query Frame = 0 Query: 1 MATNHLGPFLLTSLLMPALKATGRGEGSPARVIMVSSRLER-GKAGYLNAWMRDPTLAPSEXXXXXXXXXXXXXXXXXXXXXXXXXPPYKPFLAYGASKLANMLMVTHLNRQRQGWALPDHAHHPPSSFTXXXXXXXXXXXQGQRWDPSDDHLCVYGCSPGMVHTSLNRALAPA------LLRFIFWPLSYSLLQSPYEGARPVVFLASSERVEGRGGGFW-VIGRKEGERKGEKEVVEVASSPEAEDTVLAHRL 248 + NHL PF LT LL+P LKA+ +PAR++ VSS + GK + M PY + AYG SKL N+L HL+R+ +G + A H PG V TSL R L +L PL Y L +SP +GA ++LA +EG GGG+W + R EG + VA+ E +D + + L Sbjct: 120 LGVNHLAPFYLTELLLPTLKAS-----TPARIVNVSSNASQWGKIDLDDMHME--------------------------------KKPYSMWGAYGRSKLCNILHAKHLDRKLKGTGITVSAAH-----------------------------------PGPVRTSLGRNLEETYPWTRPILYLTLKPLMYLLFRSPEDGAMTPLYLAMEPSIEGNGGGYWDNLRRVEG-------INPVANDEELQDKLYSFSL 295
BLAST of NO09G03930 vs. NCBI_GenBank
Match: OWA50549.1 (Retinol dehydrogenase 13 [Hypsibius dujardini]) HSP 1 Score: 73.2 bits (178), Expect = 1.400e-9 Identity = 71/257 (27.63%), Postives = 103/257 (40.08%), Query Frame = 0 Query: 1 MATNHLGPFLLTSLLMPALKATGRGEGSPARVIMVSSRL-ERGKAGYLNA-WMRDPTLAPSEXXXXXXXXXXXXXXXXXXXXXXXXXPPYKPFLAYGASKLANMLMVTHLNRQRQGWALPDHAHHPPSSFTXXXXXXXXXXXQGQRWDPSDDHLCVYGCSPGMVHTSLNRAL--APALLRFIFWPLSYSLLQSPYEGARPVVFLASSERVEGRGGGFWVIGRKEGERKGEKEVVEVASSPEAEDTVLAHRLWSRCEE 254 M NH G FLLT+LL+ L+ + SP+R++++SS +RG + N W D Y P AY ASKLAN+L V L + QG A+ +A H PG+V+T L R L A ++ RFI P + +SP GA+ +++A SE +EG G ++ E A + +A D LA RLW+ E+ Sbjct: 156 MGVNHFGHFLLTNLLLAKLQ-----KSSPSRIVVLSSTAHQRGDLDFSNLNWDHD----------------------------------YDPGNAYNASKLANLLFVQELANKLQGSAVTVNAVH-----------------------------------PGLVYTDLFRHLPAADSVTRFILGPFMWMFFKSPRAGAQTTMYVALSEDLEGVSGKYF------------SNCTETAPADKALDRQLAQRLWTVSEK 326
BLAST of NO09G03930 vs. NCBI_GenBank
Match: XP_003215504.1 (PREDICTED: retinol dehydrogenase 14-like [Anolis carolinensis]) HSP 1 Score: 72.4 bits (176), Expect = 2.400e-9 Identity = 73/255 (28.63%), Postives = 110/255 (43.14%), Query Frame = 0 Query: 2 ATNHLGPFLLTSLLMPALKATGRGEGSPARVIMVSSRLERGKAGYLNAWMRDPTLAPSEXXXXXXXXXXXXXXXXXXXXXXXXXPPYKPFLAYGASKLANMLMVTHLNRQRQGWALPDHAHHPPSSFTXXXXXXXXXXXQGQRWDPSDDHLCVYGCSPGMVHTSLNRAL-APALLRFIFWPLSYSLLQSPYEGARPVVFLASSERVEGRGGGFWVIGRKEGERKGEKEVVEVASSPEAEDTVLAHRLWSRCEEMV 256 A NHLG FLLT+LL+ LK++ +P+R+++VSS+L K G +N + L+ Y AY SKLAN+L L+ + +G + + H PG+V T+L R + P L R +F +S++ +SP EGA+ V+LASS VEG V G+ G+ K E+ + P+A D ++A +LW E MV Sbjct: 156 AVNHLGHFLLTNLLLGLLKSS-----APSRIVVVSSKLY--KYGEINFDDLNSELS------------------------------YNKSFAYSRSKLANILFTRELSHRLEGTGVSVNVLH-----------------------------------PGVVRTNLGRYVHIPLLARPLFNLVSWAFFKSPLEGAQTSVYLASSPEVEG------VSGKYFGDCKEEQLL------PKAMDDLVARKLWDISEVMV 326
BLAST of NO09G03930 vs. NCBI_GenBank
Match: XP_005647174.1 (NAD(P)-binding protein [Coccomyxa subellipsoidea C-169] >EIE22630.1 NAD(P)-binding protein [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 72.4 bits (176), Expect = 2.400e-9 Identity = 69/260 (26.54%), Postives = 102/260 (39.23%), Query Frame = 0 Query: 1 MATNHLGPFLLTSLLMPALKATGRGEGSPARVIMVSSRLER-GKAGYLNAWMRDPTLAPSEXXXXXXXXXXXXXXXXXXXXXXXXXPPYKPFLAYGASKLANMLMVTHLNRQRQGWALPDHAHHPPSSFTXXXXXXXXXXXQGQRWDPSDDHLCVYGCSPGMVHTSLNRALAPALLRFIFWPL---SYSLLQSPYEGARPVVFLASSERVEGRGGGFWVIGRKEGERKGEKEVVEVASSPEAEDTVLAHRLWSRCEEMVA 257 + TNHLG FLLT++L+P L R P+R++ VSS G+ + + R Y+P++AYG SKLAN+L L R+ P D ++ V PG+V T L R L P + + PL + L++P +GA ++LASS VEG +WV + ASS + DT +A +LW +E+ A Sbjct: 114 LGTNHLGHFLLTTMLLPLLTDPSR----PSRIVNVSSSAHMFGRINFEDLQSRQ---------------------------------KYQPWVAYGQSKLANVLFTYELARRL----------------------------------PLDANVTVNALHPGVVQTELQRYLVPDPVPWWQVPLLKAASVFLKTPVQGAATSIYLASSPEVEGVSSKYWV------------DCQPKASSKASYDTDVARKLWEVSQELTA 290
BLAST of NO09G03930 vs. NCBI_GenBank
Match: NP_001068701.1 (retinol dehydrogenase 14 [Bos taurus] >AAI18146.1 Retinol dehydrogenase 14 (all-trans/9-cis/11-cis) [Bos taurus] >DAA24377.1 TPA: retinol dehydrogenase 14 (all-trans/9-cis/11-cis) [Bos taurus]) HSP 1 Score: 70.5 bits (171), Expect = 9.100e-9 Identity = 74/253 (29.25%), Postives = 110/253 (43.48%), Query Frame = 0 Query: 4 NHLGPFLLTSLLMPALKATGRGEGSPARVIMVSSRLERGKAGYLNAWMRDPTLAPSEXXXXXXXXXXXXXXXXXXXXXXXXXPPYKPFLAYGASKLANMLMVTHLNRQRQGWALPDHAHHPPSSFTXXXXXXXXXXXQGQRWDPSDDHLCVYGCSPGMVHTSLNRAL-APALLRFIFWPLSYSLLQSPYEGARPVVFLASSERVEGRGGGFWVIGRKEGERKGEKEVVEVASSPEAEDTVLAHRLWSRCEEMV 256 NHLG FLLT+LL+ LK++ +P+R+++VSS+L K G +N D S Y Y SKLAN+L L R+ +G ++ + H PG+V T+L R + P L+R +F +S++ ++P EGA+ V+LASS VEG V GR G+ K E+E++ P+A D +A +LW E MV Sbjct: 164 NHLGHFLLTNLLLGLLKSS-----APSRIVVVSSKLY--KYGDIN--FEDLNSEQS----------------------------YNKSFCYSRSKLANILFTRELARRLEGTSVTVNVLH-----------------------------------PGIVRTNLGRHIHIPLLVRPLFNLVSWAFFKTPEEGAQTAVYLASSPEVEG------VSGRYFGDCK-EEELL-----PKAMDESVARKLWDISEVMV 332
BLAST of NO09G03930 vs. NCBI_GenBank
Match: XP_015267519.1 (PREDICTED: retinol dehydrogenase 14 [Gekko japonicus]) HSP 1 Score: 70.5 bits (171), Expect = 9.100e-9 Identity = 72/253 (28.46%), Postives = 107/253 (42.29%), Query Frame = 0 Query: 4 NHLGPFLLTSLLMPALKATGRGEGSPARVIMVSSRLERGKAGYLNAWMRDPTLAPSEXXXXXXXXXXXXXXXXXXXXXXXXXPPYKPFLAYGASKLANMLMVTHLNRQRQGWALPDHAHHPPSSFTXXXXXXXXXXXQGQRWDPSDDHLCVYGCSPGMVHTSLNRAL-APALLRFIFWPLSYSLLQSPYEGARPVVFLASSERVEGRGGGFWVIGRKEGERKGEKEVVEVASSPEAEDTVLAHRLWSRCEEMV 256 NHLG FLLT+LL+ LK++ +P+R+++VSS L K G +N + L+ Y AY SKLAN+L V L R+ +G + +A H PG+V T+L R + P L++ + +S++ +SP EGA+ ++LASS VEG V G+ G K E P+A D ++A +LW E MV Sbjct: 158 NHLGHFLLTNLLLGLLKSS-----APSRIVVVSSSLY--KYGEINFDDLNSELS------------------------------YNKSFAYSRSKLANLLFVRELARRLEGTGVTVNALH-----------------------------------PGIVRTNLGRHIHIPLLVKPLLNLVSWAFFRSPLEGAQTSIYLASSPEVEG------VSGKYFGNCK------EQPLPPKAADDLVARKLWDISEVMV 326
BLAST of NO09G03930 vs. NCBI_GenBank
Match: XP_019826223.1 (PREDICTED: retinol dehydrogenase 14 [Bos indicus]) HSP 1 Score: 70.5 bits (171), Expect = 9.100e-9 Identity = 74/253 (29.25%), Postives = 110/253 (43.48%), Query Frame = 0 Query: 4 NHLGPFLLTSLLMPALKATGRGEGSPARVIMVSSRLERGKAGYLNAWMRDPTLAPSEXXXXXXXXXXXXXXXXXXXXXXXXXPPYKPFLAYGASKLANMLMVTHLNRQRQGWALPDHAHHPPSSFTXXXXXXXXXXXQGQRWDPSDDHLCVYGCSPGMVHTSLNRAL-APALLRFIFWPLSYSLLQSPYEGARPVVFLASSERVEGRGGGFWVIGRKEGERKGEKEVVEVASSPEAEDTVLAHRLWSRCEEMV 256 NHLG FLLT+LL+ LK++ +P+R+++VSS+L K G +N D S Y Y SKLAN+L L R+ +G ++ + H PG+V T+L R + P L+R +F +S++ ++P EGA+ V+LASS VEG V GR G+ K E+E++ P+A D +A +LW E MV Sbjct: 164 NHLGHFLLTNLLLGLLKSS-----APSRIVVVSSKLY--KYGDIN--FEDLNSEQS----------------------------YNKSFCYSRSKLANILFTRELARRLEGTSVTVNVLH-----------------------------------PGVVRTNLGRHIHIPLLVRPLFNLVSWAFFKTPEEGAQTAVYLASSPEVEG------VSGRYFGDCK-EEELL-----PKAMDESVARKLWDISEVMV 332 The following BLAST results are available for this feature:
BLAST of NO09G03930 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO09G03930 ID=NO09G03930|Name=NO09G03930|organism=Nannochloropsis oceanica|type=gene|length=965bpback to top protein sequence of NO09G03930.1 >NO09G03930.1-protein ID=NO09G03930.1-protein|Name=NO09G03930.1|organism=Nannochloropsis oceanica|type=polypeptide|length=269bpback to top Synonyms
Publications
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