NO09G03910, NO09G03910 (gene) Nannochloropsis oceanica

Overview
NameNO09G03910
Unique NameNO09G03910
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length6588
Alignment locationchr9:1144671..1151258 +

Link to JBrowse

Properties
Property NameValue
DescriptionZinc finger, CCCH-type
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:1144671..1151258 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0046872metal ion binding
GO:0005488binding
Vocabulary: INTERPRO
TermDefinition
IPR036855Znf_CCCH_sf
IPR007275YTH_domain
IPR013989Dev_and_cell_death_domain
IPR000571Znf_CCCH
Homology
BLAST of NO09G03910 vs. NCBI_GenBank
Match: EWM27410.1 (Zinc finger, CCCH-type [Nannochloropsis gaditana])

HSP 1 Score: 788.1 bits (2034), Expect = 3.400e-224
Identity = 563/806 (69.85%), Postives = 593/806 (73.57%), Query Frame = 0
Query:   67 MAAGESGLDDELAALTFEIEGGGYNNGGGQEGSGGLVPRDGRRGGRSMAPGSKNVVCIHYLVGMCALDKDCPYLHQYDLDRVPICPFGSXXXXXXXXXXXXXXXXXXTECVFYRQGFCMYGPFCRYKHVHRNPEDAPEEGEFNVSSQKXXXXXXXXXXXXXXXXXXXXXXXXXXTELNSSFARGGPSGNAGPSVVGGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREGGRDRRPGGALERNENYKTTLCNHWLSNKGLCPFGEDCVFAHGEAELRKHPLAIAREQQQAHRAVGGGRGAGGLYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMPGPLIPAPHEIRFVDLGIPWPEQARVRFFVIKSLNYKNLAQSVRRGVWRTHRNNERTLNEAFRTCDKVVLFFSVNESGHWQGAAVMSSLIRSQPHPQHLAPLQLLQHHQDGWTAEFSLEWLRLVSLPFPHTRPLRNPLNDNLPISRSRDCQELTPDIGRQLLYLIYASAEVSLALAGAEASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSFLGVVSSSPAQSHVFTHPALLXXXXXXXXCLQEMLDECLGRGLFSLPAGGALENFAKEVVLPGTTLFLSNASDRTIFGIFEAVSPVAYNLERTSTSTSYPVQVRIRCALEAPPLTEADPEVRYLLGPLPSSAPLGRAGPLSAEQTQRLANLLAVRAGALPL 873
            MAAGES LDDELAAL+FEIE    ++G    G  GLVPR G  GGRSMAPGSKNVVCIHYLVGMCALDKDCPYLHQYDLDRVPICPFGSXXXXXXXXXXXXXXXXXXTECVFYRQGFCMYGPFCRYKHVHRNPEDAPE+GEFN+SSQK                       XXX     + +  G S   G       XXXXXXXXXXXXXXXXXXXXX                                 XXXXXXXXXXX      RRPGGALERNENYKTTLCNHWLSNKGLCPFG+DCVFAHGE ELRKHPLAIAREQQQAHRA GGGRG                                             G  G L     +IRF DLG+PWP+QARVRFFVIKSLNYKNLAQSVRRGVWRTHRNNERTLNEAFRTCDKVVLF+SVNESGHWQGAAVM+S IRSQ  P HL PLQ+LQHHQDGWTAEFSLEWLRLVSLPFPHTRPLRNPLNDNLPISRSRDCQELTP+IGRQLLYLIY+S+EVSLAL GAEAS        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     XXXXXXXXXXXXXX      P F G       Q  +F              C +E LDECLGRGLFSLPAGGALE +AKEVVLPG+TLFL+NA+DRT+FGIFEA SPVAYNLERTSTST YP+QVRIRC LEAPPLTE+DP+VR +LGPLP+S+PLGRAGPLS  QTQRLA LLA RA ALPL
Sbjct:    1 MAAGESSLDDELAALSFEIEASSNSDGQDGRGDAGLVPRRG--GGRSMAPGSKNVVCIHYLVGMCALDKDCPYLHQYDLDRVPICPFGSXXXXXXXXXXXXXXXXXXTECVFYRQGFCMYGPFCRYKHVHRNPEDAPEQGEFNISSQK------------------AADEAXXXXXXGGNVSGEGNSYPPGAXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVVVPQQLQLLSMHQQQSQPQHGAASPFGLASXXXXXXXXXXXXXXXXXRRPGGALERNENYKTTLCNHWLSNKGLCPFGDDCVFAHGETELRKHPLAIAREQQQAHRA-GGGRG------------------------------------------ETDGREGGL---GRKIRFPDLGLPWPDQARVRFFVIKSLNYKNLAQSVRRGVWRTHRNNERTLNEAFRTCDKVVLFYSVNESGHWQGAAVMTSPIRSQQQPPHLPPLQMLQHHQDGWTAEFSLEWLRLVSLPFPHTRPLRNPLNDNLPISRSRDCQELTPEIGRQLLYLIYSSSEVSLALGGAEAS------LPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPLPRXXXXXXXXXXXXXXGIGQTFPVFSG-------QGFIF-------------PCTEETLDECLGRGLFSLPAGGALETYAKEVVLPGSTLFLANATDRTLFGIFEAASPVAYNLERTSTSTMYPLQVRIRCLLEAPPLTESDPDVRSILGPLPASSPLGRAGPLSENQTQRLATLLASRAKALPL 714          
BLAST of NO09G03910 vs. NCBI_GenBank
Match: GAX24592.1 (cleavage and polyadenylation specificity factor subunit 4 [Fistulifera solaris])

HSP 1 Score: 174.5 bits (441), Expect = 1.800e-39
Identity = 176/764 (23.04%), Postives = 262/764 (34.29%), Query Frame = 0
Query:  116 PGSKNVVCIHYLVGMCALDKDCPYLHQYDLDRVPICPFGSXXXXXXXXXXXXXXXXXXTECVFYRQGFCMYGPFCRYKHVHRNPEDAPEEGEFNVSSQKXXXXXXXXXXXXXXXXXXXXXXXXXXTELNSSFARGGPSGNAGPSVVGGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREGGRDRRPGGALERNENYKTTLCNHWLSNKGLCPFGEDCVFAHGEAELRKHPLAIAREQQQAHRAVGGGRGAGGLYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMPGPLIPAPHEIRFVDLGIPWPEQARVRFFVIKSLNYKNLAQSVRRGVWRTHRNNERTLNEAFRTCDKVVLFFSVNESGHWQGAAVMSSLIRSQPHPQHLAPLQLLQHHQDGWTAEFSLEWLRLVSLPFPHTRPLRNPLNDNLPISRSRDCQELTPDIGRQLLYLIYASAEVSL--ALAGAEASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSFLGVVSSSPAQSHVFTHPALLXXXXXXXXCLQEMLDECLGRGLFSLPAGGALENFAKEVVLPGTTLFLSNASDRTIFGIFEAVSPVAYNLERT-------STSTSYPVQVRIRCALEAPPLTEADPEVRYLLGPLPSSAPLGRAGPLSAEQTQRLANLLAVRAGAL 871
            P  + VVC H+L  +C     C +LHQYDL ++PIC  G                    EC FYR GFC++GPFCRYKH  R  ED P   +F+V                              T++ ++                                                                                         RRP  A + NE YK +LC H+++  G CPFG+ C FAHGEAELR+ P      +   +                                                     G P P++                E +   FF++++   ++LA S  RG W     +   +NE F    +V+LFF+V++S H QGAA++ S    Q         + + H +  ++    +EW R   L       +   L   LP S ++ CQ+++   G  L+  I+ +  V+L  +  G E                                                                                   + L   +    ++   T P           C  + +DECLGRG+F LPA       A   + PG T+FL N +DR +FGIFEA++P   N+E T       +TS+ +PVQ+R+R +LE PPL + DP    +L  +  +   GR G L+  QT+ +A LLA + GAL
Sbjct:   59 PRLRTVVCRHWLRDLCMKGAACEFLHQYDLSKMPICRHGD-RCKIKDCPFRHISEENRMECAFYRSGFCIHGPFCRYKHTKRPREDLPLVADFSVG----------------------------LTQMQAN------------------------------------------------------------------------------------NKEVTRRP--APKPNEFYKISLCKHFMA--GECPFGDSCHFAHGEAELRQFPKKTQEPETPTNE----------------------------ISEDLFSNVDQTTIEYYEGGASGGGKPIPIL----------------EPSEASFFILRAATQRDLALSTVRGEWYVQHKHAAKMNELFEAKTQVMLFFTVSDSRHIQGAAMLKSAAVYQ---------KSVDHGEASFSYRIQVEWYRTTELSIDTALEVAPDL--LLPTSTTQFCQDMSWKTGESLMKAIWNAPLVTLYESWTGEE-------------------------------------------------------------------------------DPPENLLDFKAPGDEENAWPTMPG----PGFIFGCSSDTMDECLGRGIFGLPAH---MKAAASNIQPGATIFLFNVTDRLLFGIFEALTPARMNIEPTAFSKNPKATSSPFPVQIRVRISLECPPLEDTDP----VLNDVLRTRGKGRIGALTHAQTEAVATLLASQCGAL 560          
BLAST of NO09G03910 vs. NCBI_GenBank
Match: GAX19311.1 (cleavage and polyadenylation specificity factor subunit 4 [Fistulifera solaris])

HSP 1 Score: 170.2 bits (430), Expect = 3.400e-38
Identity = 173/762 (22.70%), Postives = 258/762 (33.86%), Query Frame = 0
Query:  116 PGSKNVVCIHYLVGMCALDKDCPYLHQYDLDRVPICPFGSXXXXXXXXXXXXXXXXXXTECVFYRQGFCMYGPFCRYKHVHRNPEDAPEEGEFNVSSQKXXXXXXXXXXXXXXXXXXXXXXXXXXTELNSSFARGGPSGNAGPSVVGGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREGGRDRRPGGALERNENYKTTLCNHWLSNKGLCPFGEDCVFAHGEAELRKHPLAIAREQQQAHRAVGGGRGAGGLYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMPGPLIPAPHEIRFVDLGIPWPEQARVRFFVIKSLNYKNLAQSVRRGVWRTHRNNERTLNEAFRTCDKVVLFFSVNESGHWQGAAVMSSLIRSQPHPQHLAPLQLLQHHQDGWTAEFSLEWLRLVSLPFPHTRPLRNPLNDNLPISRSRDCQELTPDIGRQLLYLIYASAEVSLALAGAEASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSFLGVVSSSPAQSHVFTHPALLXXXXXXXXCLQEMLDECLGRGLFSLPAGGALENFAKEVVLPGTTLFLSNASDRTIFGIFEAVSPVAYNLERT-------STSTSYPVQVRIRCALEAPPLTEADPEVRYLLGPLPSSAPLGRAGPLSAEQTQRLANLLAVRAGAL 871
            P  + VVC H+L  +C     C +LHQYDL ++PIC  G                    EC FYR GFC++GPFCRYKH  R  ED P   +F+V                              T++ ++                                                                                         RRP  A + NE YK +LC H+++  G CPFG+ C FAHGEAELR+ P    ++ Q+                                                       G P P++                E +   FF++++   ++LA S  RG W     +   LNE F    +V+LFF+V++S H QGAA++ S              +   H +  ++    ++W R   L       +   L   LP S ++ CQ+++   G  L+  I+ +  V+L  +    +                                                                                        + P    +F              C  + +DECLGRG+F LPA       A   + PG T+FL N +DR +FGIFEA++P   N+E T       +TS+ +PVQ+R+R +LE PPL + DP    +L  +  +   GR G L+  QT+ +A LLA + GAL
Sbjct:   59 PRLRTVVCRHWLRDLCMKGAACEFLHQYDLSKMPICRHGD-RCKIKDCPFRHISEENRMECAFYRSGFCIHGPFCRYKHTKRPREDLPLVADFSVG----------------------------LTQMQANNKEVA------------------------------------------------------------------------------------RRP--APKPNEFYKISLCKHFMA--GECPFGDSCHFAHGEAELRQFP----KKTQEPETLTN------------------------EISEDLFSNVDQTTIEYYEGGASGGGKPIPIL----------------EPSEASFFIVRAATQRDLALSTVRGEWYVQHKHAAKLNELFEAKTQVMLFFTVSDSRHIQGAAMLKSAAVYH---------KSADHGEASFSYRIQVDWYRTTELSIETALEVAPDL--LLPTSTTQYCQDMSWKTGESLMKAIWNAPLVTLYESWTGEADPPENLLDFKAPGEEELAW--------------------------------------------------------------------PTMPGPGFIF-------------GCSSDTMDECLGRGIFGLPAH---MKAAASNIQPGATIFLFNVTDRLLFGIFEALTPARMNIEPTAFSKNPKATSSPFPVQIRVRISLECPPLEDTDP----VLNDVLRTRGKGRIGALTHAQTEAVATLLASQCGAL 560          
BLAST of NO09G03910 vs. NCBI_GenBank
Match: XP_002185604.1 (hypothetical protein PHATRDRAFT_50624 [Phaeodactylum tricornutum CCAP 1055/1] >EEC42902.1 hypothetical protein PHATRDRAFT_50624 [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 163.7 bits (413), Expect = 3.200e-36
Identity = 181/810 (22.35%), Postives = 283/810 (34.94%), Query Frame = 0
Query:   71 ESGLDDELAALTFEIEGGGYNNGGGQEGSGGLVPRDGRRGGRSMAPGSKNVVCIHYLVGMCALDKDCPYLHQYDLDRVPICPFGSXXXXXXXXXXXXXXXXXXTECVFYRQGFCMYGPFCRYKHVHRNPEDAPEEGEFNVSSQKXXXXXXXXXXXXXXXXXXXXXXXXXXTELNSSFARGGPSGNAGPSVVGGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREGGRDRRPGGALERNENYKTTLCNHWLSNKGLCPFGEDCVFAHGEAELRKHPLAIAREQQQAHRAVGGGRGAGGLYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMPGPLIPAPHEIRFVDLGIPWPEQARVRFFVIKSLNYKNLAQSVRRGVWRTHRNNERTLNEAFRT-CDKVVLFFSVNESGHWQGAAVMSSLIRSQPHPQHLAPLQLLQHHQDGWTAEFSLEWLRLVSLPFPHTRPLRNPLNDNLPISRSRDCQELTPDIGRQLLYLIYASAEVSLALAGAEASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSFLGVVSSSPAQSHVFTHPA--LLXXXXXXXXCLQEMLDECLGRGLFSLPAGGALENFAKEVVLPGTTLFLSNASDRTIFGIFEA-------VSPVAYNLERTSTSTSYPVQVRIRCALEAPPLTEADPEVRYLLGPLPSSAPLGRAGPLSAEQTQRLANLLAVRAGAL 871
            E G+ + L  L +  EG  +  G   +        D         P  + VVC H+L  +C     C +LHQYDL ++P+C  G                    ECVFY QGFC++GPFCRYKH+ R  ED P   +F +                              +++ +S                                                                                    + G       A + NE YK +LC H+L  +G CPF E+C FAHGE+ELRK P    R+ +      GG      ++                                        G P P++               P+QA  +F+++++  + +LA S  +  W   R + + +N A++    +V++FF+V++S H QGAA++++    Q         +   + +D +    SLEW R   LP      + + L   LP S ++ CQ+++   G  L+  I+ +  V+L                                                                                        P  L     +P      T PA   +        C  + +DECLG G+F LP+       A   + PG ++FL N +DR +FGIFEA       + P A++    + S+ +PVQ+R+R +LE PPL + D     +L  +  S   GR GPL+  QT+ +A+LLA + GAL
Sbjct:   28 EHGIPETLDPLPYRKEGSVFATGDEAKPVLTSAKHD---------PRLRTVVCRHWLRDLCMKGTACEFLHQYDLSKMPLCRHGE-RCKIKDCPFRHISEANRMECVFYSQGFCIHGPFCRYKHIRRAREDLPAVADFTLG----------------------------LSQMQAS------------------------------------------------------------------------------------KDGEKVTKRTAPKPNEFYKISLCKHFL--QGSCPFAENCHFAHGESELRKFP----RKDENEEEGDGGDELTDNMF----------------------VNQDTTTIDYFQGGASGGGKPNPILE--------------PDQA--KFYIVRAATHHDLAISTVQNEWYLQRKHAQAMNAAYQDGKHQVMIFFTVSDSNHIQGAALLTAPGVYQ---------KSSDNGKDPFCHRISLEWFRTTELPIETALGVASDL--LLPTSSTQYCQDMSSTTGESLMKAIWNAPLVTL----------------------------------------------------------------------------FESWSGEQEPPTPDALLTDFRAP------TDPAWPTIPGPGFIFGCSSDTMDECLGLGIFGLPSH---MKAAASSIRPGASIFLFNVTDRLLFGIFEALTHAKMNIEPSAFSKNPKAVSSPFPVQIRVRISLECPPLEDTDA----ILNDILRSRGQGRIGPLTHPQTEAVASLLANQCGAL 571          
BLAST of NO09G03910 vs. NCBI_GenBank
Match: XP_008901778.1 (hypothetical protein PPTG_08803 [Phytophthora parasitica INRA-310] >ETI52344.1 hypothetical protein F443_04483 [Phytophthora parasitica P1569] >ETL45615.1 hypothetical protein L916_04321 [Phytophthora parasitica] >ETL98786.1 hypothetical protein L917_04201 [Phytophthora parasitica] >ETM51951.1 hypothetical protein L914_04303 [Phytophthora parasitica] >ETN12735.1 hypothetical protein PPTG_08803 [Phytophthora parasitica INRA-310] >ETO81119.1 hypothetical protein F444_04511 [Phytophthora parasitica P1976] >ETP22165.1 hypothetical protein F441_04455 [Phytophthora parasitica CJ01A1] >KUF82610.1 Cleavage and polyadenylation specificity factor subunit 4 [Phytophthora nicotianae])

HSP 1 Score: 160.6 bits (405), Expect = 2.700e-35
Identity = 184/817 (22.52%), Postives = 268/817 (32.80%), Query Frame = 0
Query:   75 DDELAALTFEI-----EGGGYNNGGGQEGSGGLVPRDGRRGGRSMAPGS---KNVVCIHYLVGMCALDKDCPYLHQYDLDRVPICPFGSXXXXXXXXXXXXXXXXXXTECVFYRQGFCMYGPFCRYKHVHRNPEDAPEEGEFNVSSQKXXXXXXXXXXXXXXXXXXXXXXXXXXTELNSSFARGGPSGNAGPSVVGGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREGGRDRRPGGALERNENYKTTLCNHWLSNKGLCPFGEDCVFAHGEAELRKHPLAIAREQQQAHRAVGGGRGAGGLYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMPGPLIPAPHEIRFVDLGIPWPEQARVRFFVIKSLNYKNLAQSVRRGVWRTHRNNERTLNEAFRTCDKVVLFFSVNESGHWQGAA-----VMSSLIRSQPHPQHLAPLQLLQHHQDG---WTAEFSLEWLRLVSLPFPHTRPLRNPLNDNLPISRSRDCQELTPDIGRQLLYLIYASAEVSLALAGAEASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSFLGVVSSSPAQSHVFTHPALLXXXXXXXXCLQEMLDECLGRGLFSLPAGGALENFAKEVVLPGTTLFLSNASDRTIFGIFEAVSPVAYNL------ERTSTSTSYPVQVRIRCALEAPPLTEADPEVRYLLGPLPSSAPLGRAGPLSAEQTQRLANLLAVRAGA 870
            D+E   L+F+      E G      G+  +G +V   G   G   A        VVC H+L  +C    +C +LHQYD+ ++P C +G                    EC FY+QGFC +G  CRY+H+    E+ PE  +F + S+                                                                                                                     E  + R+   A   NE +K  +C HW    G CPFG++C FAHGE ELR  P    +E+++A     GG    G  G                                         PGP +P               +    ++F+++S +Y NLA SV  G W       + +  A  T D+V L F+V  S H+QG A      M+S+  S           ++ +  DG   W   F +EWLR+   P+          N +L +    + QEL  + G  L+ L++   ++ L     E                                                                                  P F G     PA     T P  +        C  + +DEC GR LF L      E  A++ V PGT LFL N SD+ + GIFEAVSP   N+         +  + +PVQVR    L AP L  +DP+++ ++G           GPLS + TQ+LA++ A R+GA
Sbjct:    9 DEEERRLSFDFEMLLPEDGDDRMDSGEHRNGAVVGVGGATFGHQAAKKDFKRGTVVCRHWLRALCMKGDNCEFLHQYDMSKMPECRWG-MECQVPECPFRHVPDEERVECAFYKQGFCSHGSSCRYRHIKLAREECPETADFALQSK-----------------------------------------------------------------------------------------------------------------VADEENVKRRK---AQPVNEFFKIAICKHW-EKMGSCPFGDECHFAHGETELRPFPKG-EKEEKEARAGRQGGHHGPGFNGADRQHQGPP--------------------------------PGPQLP--------------DDGKMAKYFLVQSASYLNLAHSVHHGRWAVPPAVLQQIKMASETSDEVFLLFAVGPSKHYQGVARLVNGAMASVDTSMGEDLSTG---IVPYEADGKAEWAGSFGIEWLRICECPWERLAQFE---NKHLAVPECPNGQELDAETGHALVRLLFNQPQIQLHYRSVE-----------------------------------------------------DEPKLPGGAEELATRRREAAESLFGAPGGPGFGG-----PAPRWQATQPGFV------FTCTTQTIDECFGRMLFGL--SQEQEGLAQQHVTPGTPLFLLNLSDQHLLGIFEAVSPAIVNMMPGAFCHGPNMPSPFPVQVRFAVMLNAPALPTSDPQIKQVIGDNGVD-----VGPLSLQVTQQLADVFAERSGA 583          
BLAST of NO09G03910 vs. NCBI_GenBank
Match: ETK92234.1 (hypothetical protein L915_04355 [Phytophthora parasitica])

HSP 1 Score: 160.2 bits (404), Expect = 3.500e-35
Identity = 184/817 (22.52%), Postives = 268/817 (32.80%), Query Frame = 0
Query:   75 DDELAALTFEI-----EGGGYNNGGGQEGSGGLVPRDGRRGGRSMAPGS---KNVVCIHYLVGMCALDKDCPYLHQYDLDRVPICPFGSXXXXXXXXXXXXXXXXXXTECVFYRQGFCMYGPFCRYKHVHRNPEDAPEEGEFNVSSQKXXXXXXXXXXXXXXXXXXXXXXXXXXTELNSSFARGGPSGNAGPSVVGGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREGGRDRRPGGALERNENYKTTLCNHWLSNKGLCPFGEDCVFAHGEAELRKHPLAIAREQQQAHRAVGGGRGAGGLYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMPGPLIPAPHEIRFVDLGIPWPEQARVRFFVIKSLNYKNLAQSVRRGVWRTHRNNERTLNEAFRTCDKVVLFFSVNESGHWQGAA-----VMSSLIRSQPHPQHLAPLQLLQHHQDG---WTAEFSLEWLRLVSLPFPHTRPLRNPLNDNLPISRSRDCQELTPDIGRQLLYLIYASAEVSLALAGAEASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSFLGVVSSSPAQSHVFTHPALLXXXXXXXXCLQEMLDECLGRGLFSLPAGGALENFAKEVVLPGTTLFLSNASDRTIFGIFEAVSPVAYNL------ERTSTSTSYPVQVRIRCALEAPPLTEADPEVRYLLGPLPSSAPLGRAGPLSAEQTQRLANLLAVRAGA 870
            D+E   L+F+      E G      G+  +G +V   G   G   A        VVC H+L  +C    +C +LHQYD+ ++P C +G                    EC FY+QGFC +G  CRY+H+    E+ PE  +F + S+                                                                                                                     E  + R+   A   NE +K  +C HW    G CPFG++C FAHGE ELR  P    +E+++A     GG    G  G                                         PGP +P               +    ++F+++S +Y NLA SV  G W       + +  A  T D+V L F+V  S H+QG A      M+S+  S           ++ +  DG   W   F +EWLR+   P+          N +L +    + QEL  + G  L+ L++   ++ L     E                                                                                  P F G     PA     T P  +        C  + +DEC GR LF L      E  A++ V PGT LFL N SD+ + GIFEAVSP   N+         +  + +PVQVR    L AP L  +DP+++ ++G           GPLS + TQ+LA++ A R+GA
Sbjct:    9 DEEERRLSFDFEMLLPEDGDDRMDSGEHRNGAVVGVGGATFGHQAAKKDFKRGTVVCRHWLRALCMKGDNCEFLHQYDMSKMPECRWG-MECQVPECPFRHVPDEERVECAFYKQGFCSHGSSCRYRHIKLAREECPETADFALQSK-----------------------------------------------------------------------------------------------------------------VADEENVKRRK---AQPVNEFFKIAICKHW-EKMGSCPFGDECHFAHGETELRPFPKG-EKEEKEARAGRQGGHHGPGFNGADRQHQGPP--------------------------------PGPQLP--------------DDGKMAKYFLVQSASYLNLAHSVHHGRWAVPPAVLQQIKMASETSDEVFLLFAVGPSKHYQGVARLVNGAMASVDTSMGEDLSTG---IVPYEADGKAEWAGSFGIEWLRICECPWERLAQFE---NKHLVVPECPNGQELDAETGHALVRLLFNQPQIQLHYRSVE-----------------------------------------------------DEPKLPGGAEELATRRREAAESLFGAPGGPGFGG-----PAPRWQATQPGFV------FTCTTQTIDECFGRMLFGL--SQEQEGLAQQHVTPGTPLFLLNLSDQHLLGIFEAVSPAIVNMMPGAFCHGPNMPSPFPVQVRFAVMLNAPALPTSDPQIKQVIGDNGVD-----VGPLSLQVTQQLADVFAERSGA 583          
BLAST of NO09G03910 vs. NCBI_GenBank
Match: ETP50050.1 (hypothetical protein F442_04517 [Phytophthora parasitica P10297])

HSP 1 Score: 158.3 bits (399), Expect = 1.300e-34
Identity = 183/817 (22.40%), Postives = 267/817 (32.68%), Query Frame = 0
Query:   75 DDELAALTFEI-----EGGGYNNGGGQEGSGGLVPRDGRRGGRSMAPGS---KNVVCIHYLVGMCALDKDCPYLHQYDLDRVPICPFGSXXXXXXXXXXXXXXXXXXTECVFYRQGFCMYGPFCRYKHVHRNPEDAPEEGEFNVSSQKXXXXXXXXXXXXXXXXXXXXXXXXXXTELNSSFARGGPSGNAGPSVVGGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREGGRDRRPGGALERNENYKTTLCNHWLSNKGLCPFGEDCVFAHGEAELRKHPLAIAREQQQAHRAVGGGRGAGGLYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMPGPLIPAPHEIRFVDLGIPWPEQARVRFFVIKSLNYKNLAQSVRRGVWRTHRNNERTLNEAFRTCDKVVLFFSVNESGHWQGAA-----VMSSLIRSQPHPQHLAPLQLLQHHQDG---WTAEFSLEWLRLVSLPFPHTRPLRNPLNDNLPISRSRDCQELTPDIGRQLLYLIYASAEVSLALAGAEASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSFLGVVSSSPAQSHVFTHPALLXXXXXXXXCLQEMLDECLGRGLFSLPAGGALENFAKEVVLPGTTLFLSNASDRTIFGIFEAVSPVAYNL------ERTSTSTSYPVQVRIRCALEAPPLTEADPEVRYLLGPLPSSAPLGRAGPLSAEQTQRLANLLAVRAGA 870
            D+E   L+F+      E G      G+  +G +V   G   G   A        VVC H+L  +C    +C +LHQYD+ ++P C +G                    EC FY+QGFC +G  CRY+H+    E+ PE  +F + S+                                                                                                                     E  + R+   A   NE +K  +C HW    G CPFG++C FAHGE ELR  P    +E+++A     GG    G  G                                         PGP +P               +    ++F+++S +Y NLA SV  G W       + +  A    D+V L F+V  S H+QG A      M+S+  S           ++ +  DG   W   F +EWLR+   P+          N +L +    + QEL  + G  L+ L++   ++ L     E                                                                                  P F G     PA     T P  +        C  + +DEC GR LF L      E  A++ V PGT LFL N SD+ + GIFEAVSP   N+         +  + +PVQVR    L AP L  +DP+++ ++G           GPLS + TQ+LA++ A R+GA
Sbjct:    9 DEEERRLSFDFEMLLPEDGDDRMDSGEHRNGAVVGVGGATFGHQAAKKDFKRGTVVCRHWLRALCMKGDNCEFLHQYDMSKMPECRWG-MECQVPECPFRHVPDEERVECAFYKQGFCSHGSSCRYRHIKLAREECPETADFALQSK-----------------------------------------------------------------------------------------------------------------VADEENVKRRK---AQPVNEFFKIAICKHW-EKMGSCPFGDECHFAHGETELRPFPKG-EKEEKEARAGRQGGHHGPGFNGADRQHQGPP--------------------------------PGPQLP--------------DDGKMAKYFLVQSASYLNLAHSVHHGRWAVPPAVLQQIKMASEMSDEVFLLFAVGPSKHYQGVARLVNGAMASVDTSMGEDLSTG---IVPYEADGKAEWAGSFGIEWLRICECPWERLAQFE---NKHLAVPECPNGQELDAETGHALVRLLFNQPQIQLHYRSVE-----------------------------------------------------DEPKLPGGAEELATRRREAAESLFGTPGGPGFGG-----PAPRWQATQPGFV------FTCTTQTIDECFGRMLFGL--SQEQEGLAQQHVTPGTPLFLLNLSDQHLLGIFEAVSPAIVNMMPGAFCHGPNMPSPFPVQVRFAVMLNAPALPTSDPQIKQVIGDNGVD-----VGPLSLQVTQQLADVFAERSGA 583          
BLAST of NO09G03910 vs. NCBI_GenBank
Match: XP_024575234.1 (cleavage and polyadenylation specificity factor cpsf30-like [Plasmopara halstedii] >CEG38865.1 cleavage and polyadenylation specificity factor cpsf30-like [Plasmopara halstedii])

HSP 1 Score: 155.6 bits (392), Expect = 8.600e-34
Identity = 184/789 (23.32%), Postives = 267/789 (33.84%), Query Frame = 0
Query:   94 GGQEGSGGLVPRDGRRGGRSMAPGSKNVVCIHYLVGMCALDKDCPYLHQYDLDRVPICPFGSXXXXXXXXXXXXXXXXXXTECVFYRQGFCMYGPFCRYKHVHRNPEDAPEEGEFNVSSQKXXXXXXXXXXXXXXXXXXXXXXXXXXTELNSSFARGGPSGNAGPSVVGGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREGGRDRRPGGALERNENYKTTLCNHWLSNKGLCPFGEDCVFAHGEAELRKHPLAIAREQQQAHRAVGGGRGAGGLYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMPGPLIPAPHEIRFVDLGIPWPEQARV-RFFVIKSLNYKNLAQSVRRGVWRTHRNNERTLNEAFRTCDKVVLFFSVNESGHWQGAA-VMSSLIRSQPHP--QHLAPLQLLQHHQDG---WTAEFSLEWLRLVSLPFPHTRPLRNPLNDNLPISRSRDCQELTPDIGRQLLYLIYASAEVSLALAGAEASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSFLGVVSSSPAQSHVFTHPALLXXXXXXXXCLQEMLDECLGRGLFSLPAGGALENFAKEVVLPGTTLFLSNASDRTIFGIFEAVSPVAYNL------ERTSTSTSYPVQVRIRCALEAPPLTEADPEVRYLLGPLPSSAPLGRAGPLSAEQTQRLANLLAVRAGA 870
            GG       V +D +RG          VVC H+L  +C    +C +LHQYD+ ++P C +G                    EC FY+QGFC +G  CRY+H+    E+ PE  +F + S+                                                                                                                     E  + R+   A   NE +K  +C HW    G CPFG++C FAHG+ ELR  P                                                         XXXXXXX          HE R V  G P P++ ++ ++F+++S +Y NLA SV    W       + +  A     ++ LFF+V  S H+QG A V++  I        + LA L ++ +  DG   W   FS+EWLR+   P+       N L   L +    +  EL  D G  L+ L+Y   ++ L     E                                                                                  P F G   S+P +  V T P  +        C+ + +DEC GR LF LP     +  A++ V PGT L+L N SD+ + GIFEA+SP   N+         + S+ +PVQ R    L AP L  +DP+++ +LG          AGPLS + TQ+LA++ A R+GA
Sbjct:   45 GGATFGQTTVKKDFKRG---------TVVCRHWLRALCMKGDNCEFLHQYDMSKMPECRWG-MECQVPECPFRHVPDEERVECAFYKQGFCSHGSSCRYRHIKLAREECPETADFALQSK-----------------------------------------------------------------------------------------------------------------VADEENVKRRK---AQPVNEFFKIAICKHW-EKVGSCPFGDECHFAHGDMELRPFP------------------------------------------------------KGEXXXXXXXXXXXXXXXXXHEAREVISGPPLPDEGKMAKYFLVQSASYLNLAHSVHYQQWSVPSGIAQQIKMAAEASYEIFLFFTVGSSKHYQGVARVVNEAIGDYDTSVGEDLA-LNVVPYEADGKCKWMGAFSIEWLRICECPWDRLAQFENKL---LTVPECPNGHELDSDTGHSLVRLLYNQPQIQLHYRSVE-----------------------------------------------------DEMKLLGGAEELATRRREAAESLFGAPIGPGFNG---SAPPRWKV-TQPGFV------FTCVAQTIDECFGRMLFGLPL--EQDTLAQQHVSPGTPLYLLNLSDQHLLGIFEAISPALVNMMPGAFCHGPNMSSPFPVQARFAVMLNAPALPISDPQIKQVLGDNKLD-----AGPLSLQITQQLADIFAERSGA 578          
BLAST of NO09G03910 vs. NCBI_GenBank
Match: XP_002902266.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY56938.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 153.3 bits (386), Expect = 4.300e-33
Identity = 179/814 (21.99%), Postives = 265/814 (32.56%), Query Frame = 0
Query:   75 DDELAALTFEI-----EGGGYNNGGGQEGSGGLVPRDGRRGGRSMAPGS---KNVVCIHYLVGMCALDKDCPYLHQYDLDRVPICPFGSXXXXXXXXXXXXXXXXXXTECVFYRQGFCMYGPFCRYKHVHRNPEDAPEEGEFNVSSQKXXXXXXXXXXXXXXXXXXXXXXXXXXTELNSSFARGGPSGNAGPSVVGGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREGGRDRRPGGALERNENYKTTLCNHWLSNKGLCPFGEDCVFAHGEAELRKHPLAIAREQQQAHRAVGGGRGAGGLYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMPGPLIPAPHEIRFVDLGIPWPEQARVRFFVIKSLNYKNLAQSVRRGVWRTHRNNERTLNEAFRTCDKVVLFFSVNESGHWQGAA--VMSSLIRSQPHPQHLAPLQLLQHHQDG---WTAEFSLEWLRLVSLPFPHTRPLRNPLNDNLPISRSRDCQELTPDIGRQLLYLIYASAEVSLALAGAEASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSFLGVVSSSPAQSHVFTHPALLXXXXXXXXCLQEMLDECLGRGLFSLPAGGALENFAKEVVLPGTTLFLSNASDRTIFGIFEAVSPVAYNL------ERTSTSTSYPVQVRIRCALEAPPLTEADPEVRYLLGPLPSSAPLGRAGPLSAEQTQRLANLLAVRAGA 870
            D+E   L+F+      E G      G+  +G +V   G   G   A        VVC H+L  +C    +C +LHQYD+ ++P C +G                    EC FY+QGFC +G  CRY+H+    E+ PE  +F + ++                                                                                                                     E  + R+   A   NE +K  +C HW    G CPFG++C FAHGE ELR  P    +E+++A     GG       G                                         PGP +P               +    ++F+++S +Y NLA SV    W       + +  A  T D+V LFF+V  S H+QG A  V  ++  +           ++ +  DG   W   F +EWLR+   P+          N  L +S   + QEL  + G  L+ L++   ++ L     E                                                                                  P F G     PA     + P  +        C  + +DEC GR LF L      E  A++ V PGT LFL N SD+ + GIFEAVSP   N+         +  + +PVQ R    L AP L  +DP+++ ++G           GPLS + TQ+LA++ A R+GA
Sbjct:    9 DEEERRLSFDFEMLLPEDGDDRMDSGEHRNGAVVGVGGATFGHQAAKKDFKRGTVVCRHWLRALCMKGDNCEFLHQYDMSKMPECRWG-MECQVPECPFRHVPDEERVECAFYKQGFCSHGSSCRYRHIKLAREECPETADFALQAK-----------------------------------------------------------------------------------------------------------------VADEENVKRRK---AQPVNEFFKIAICKHW-EKMGSCPFGDECHFAHGETELRPFPKG-EKEEKEARAGRPGGHQGPAFNGGDRPHQGPP--------------------------------PGPQLP--------------DDGKMAKYFLLQSASYLNLAHSVHHERWAVPPAVLQQIKMASETSDEVFLFFAVGPSKHYQGVARLVNGAMSSADASAGEDLAAGVVPYEADGKAEWAGSFGIEWLRICECPWERLAQFE---NKQLAVSECPNGQELDAETGHALVRLLFNQPQIQLHYRSVE-----------------------------------------------------DESKLPGGAEELATRRREAAESLFGAPAGPGFGG-----PAPRWQPSQPGFV------FACTTQTIDECFGRMLFGL--AQEHEGLAQQHVTPGTPLFLLNQSDQHLLGIFEAVSPAIVNMMPGAFCHGPNMPSPFPVQTRFAVMLNAPALPTSDPQIKRVIGDNGVD-----VGPLSLQATQQLADVFAERSGA 583          
BLAST of NO09G03910 vs. NCBI_GenBank
Match: CCA17401.1 (conserved hypothetical protein [Albugo laibachii Nc14])

HSP 1 Score: 149.1 bits (375), Expect = 8.100e-32
Identity = 173/775 (22.32%), Postives = 252/775 (32.52%), Query Frame = 0
Query:  121 VVCIHYLVGMCALDKDCPYLHQYDLDRVPICPFGSXXXXXXXXXXXXXXXXXXTECVFYRQGFCMYGPFCRYKHVHRNPEDAPEEGEFNVSSQKXXXXXXXXXXXXXXXXXXXXXXXXXXTELNSSFARGGPSGNAGPSVVGGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREGGRDRRPGGALERNENYKTTLCNHWLSNKGLCPFGEDCVFAHGEAELRKHPLAIAREQQQAHRAVGGGRGAGGLYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMPGPLIPAPHEIRFVDLGIPWPEQAR-VRFFVIKSLNYKNLAQSVRRGVWRTHRNNERTLNEAFRTCDKVVLFFSVNESGHWQGAA-VMSSLIRSQPHPQHLAPLQLLQHHQD---GWTAEFSLEWLRLVSLPFPHTRPLRNPLNDNLPISRSRDCQELTPDIGRQLLYLIYASAEVSLALAGAEASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSFLGVVSSSPAQSHVFTHPALL-------XXXXXXXXCLQEMLDECLGRGLFSLPAGGALENFAKEVVLPGTTLFLSNASDRTIFGIFEAVSPVAYNLERTSTSTS------YPVQVRIRCALEAPPLTEADPEVRYLLGPLPSSAPLGRAGPLSAEQTQRLANLLAVRAG---ALPLIP 875
            VVC H+L G+C     C +LHQYD+ ++P C +G                    EC FYRQGFC +GP CRY+H+    E+ PE  +F + S+                                                                                                                     E    RR    +  NE YK  +C HW    G CPFG++C FAHG+ ELR  P    R+ ++A        GA   +                                            P+    H I F +     P+  R   +F++ S +Y N+A SV    W    +  + L E   + D V LF +V  S H+QG   V   +I+  P         ++ +  D    W   F +EWLR+   P+     + +     L +  +     L  D GR+ ++++++  ++ L     E                                                                                   +F   V    A + V+++P  L               C    +DEC GR LF L  G   E  AK+ V+PGT LFL N SDR + GIFEAVSP   N+   + S S      +PVQ R    L APP++  +P ++ L G         R GP++   TQ+LA++ A R G   A P IP
Sbjct:   62 VVCRHWLRGLCMKGDSCEFLHQYDMSKMPECRWG-MECQVPECPFRHVPDEDRMECAFYRQGFCSHGPNCRYRHIKLAREECPETADFALQSK------------------------------------------------------------------------------------------------------------------VAEEENVKRRKTQPV--NEFYKIAICKHW-EKLGSCPFGDECHFAHGDQELRPFP----RQNERAESVGFQKPGASDTF--------------------------------------------PINEPSHPIPFQEPQPRLPDADRNCAYFILHSFSYHNIAHSVHYHQWTLTDSPLQQLREIAGSYDVVFLFITVTSSRHFQGVVRVTKDIIQRLPSCGEDLASGIVPYQTDKRSSWEGVFPVEWLRICECPWEFFESIASKY---LFVPNAPKLIPLETDQGRKCMHILFSQPQIQLHYKSVEDEQTLIGG---------------------------------------------------------------------------AFELAVRRREAAASVYSNPNTLSTFHWRVSAPGFVFACNNLTIDECFGRLLFGL--GKDHEAIAKQHVVPGTPLFLLNMSDRHLLGIFEAVSPSVVNMVPNAFSHSPHQMSPFPVQTRFVVQLNAPPISTTEPMIKQLFGDRGV-----RIGPITLPVTQKLADIFAKRCGVVLAPPTIP 585          
The following BLAST results are available for this feature:
BLAST of NO09G03910 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27410.13.400e-22469.85Zinc finger, CCCH-type [Nannochloropsis gaditana][more]
GAX24592.11.800e-3923.04cleavage and polyadenylation specificity factor su... [more]
GAX19311.13.400e-3822.70cleavage and polyadenylation specificity factor su... [more]
XP_002185604.13.200e-3622.35hypothetical protein PHATRDRAFT_50624 [Phaeodactyl... [more]
XP_008901778.12.700e-3522.52hypothetical protein PPTG_08803 [Phytophthora para... [more]
ETK92234.13.500e-3522.52hypothetical protein L915_04355 [Phytophthora para... [more]
ETP50050.11.300e-3422.40hypothetical protein F442_04517 [Phytophthora para... [more]
XP_024575234.18.600e-3423.32cleavage and polyadenylation specificity factor cp... [more]
XP_002902266.14.300e-3321.99conserved hypothetical protein [Phytophthora infes... [more]
CCA17401.18.100e-3222.32conserved hypothetical protein [Albugo laibachii N... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL117nonsL117Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR056ncniR056Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006215NSK006215Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G03910.1NO09G03910.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|280364gene_9686Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100237g7gene3148Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G03910.1NO09G03910.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G03910 ID=NO09G03910|Name=NO09G03910|organism=Nannochloropsis oceanica|type=gene|length=6588bp
TTTCCCATATGTCCCAAGCCATCGGTATGCAAGCATCATGGCAGGCATGG
ACAGACAGATTATCCAGGCAAATGAAAAGGACAGGGCCTCCTCGGCCCAC
ACGATCCAGGCAAAGTGCGAACATTTTTTCTGTTCTCAGTACTCTCAGTC
GCCGTCGGACGAACGACTCATCGCTGGGGACACTCCTTGGAGCAGCACTT
ACTACCGCCTGGGCCAACAACTCCTCCAGCGCAACACCGCGCTCCGCGCC
CGTCAATAAATGCATGCATGACACTTTGTGATATTTTGCTTGGGCGCGAC
TTTCGCGGTTCCCGCTGGCGGCTTCACGAAAGGCGCCCTAACACGACAGA
CGGATGGACGACGCATGTCTTCTTCATTCCCAAAAAAGCAACTGGGACAT
GCAACGCCGGGCACACGCACACGAAGGTCTTTAAAGGCCCCGTCTTTCCG
TCCTTTATGAACTTTCGCACCACTTAATCATGTTTAAATGCACAAGATGC
TGGCATGTCTGTCCAGGGCGCTTAGCCAGGGTGCGAGGTTCAGCAATCCC
CGCCCCACCCCCCTCAGAGAAATCGTTGACTGAGAGGCAGATGCTTCACA
ATGACAATTCTTGGAGACCCTTTGGTGGAGCATACCTGCTGATTCTCACC
ACCCCCTCCTCCCTTCCCTACACAGCCATGGCAGCCGGCGAAAGTGGCCT
GGATGATGAGCTAGCCGCGCTCACATTTGAGATCGAGGGCGGCGGCTACA
ACAACGGAGGGGGGCAAGAAGGCAGCGGAGGCCTTGTTCCGCGAGATGGG
AGAAGGGGGGGGCGGTCCATGGCCCCGGGTAGCAAGAACGTCGTCTGCAT
CCACTACCTAGTGGGCATGTGTGCCTTGGACAAAGACTGTCCCTATTTGC
ACCAGTATGACCTGGACCGGGTGCCAATCTGCCCgtacgtgcttgggagg
gaggacggaggggacgcgtgtcataccgatgatgacggacatctatctga
ccttgctttcctacttccacactttcctagGTTTGGCAGCAAATGCGTGC
GCGACGACGACTGCCCTTTCAAGCATGTCACCGAGgtaagggtggcgggg
agagtgtataggagggaagccgggcgggacgggggggatggaatctcgtc
ctgaatttggaagtggaatcgaatgaaaacgattcgtcgcccactcggaa
gaagcatgagggacgaagagagaatggagcgaagatgaagtaaggctaga
gaggggacaagaaagacagtaggaccaacaaagagggagggaaggaggaa
gggagggaggattcaatgcggggaggtggcttacagtcctggacggcggc
aatattgagctttgtgattttctcactgaactccctctttcccctctctt
ccttttatctcttttgcatgcactcagGAGGACAAGACGGAGTGCGTATT
CTACAGGCAGGGTTTTTGCATGTACGGGCCCTTCTGCCGgtacgaggaat
gaaggagagggagagagggaggaagatgtgaatgcatacctggatgatgg
atggatgaagcagttggtggtatgctttccttagcccgagaatgatttat
tgcacgcgcgttgcggcgtgtcatgaatgtagggcggcgtgtaaagggat
tagggtcattttcattcccaccctgggcgctcttagattccgcccctcac
cctctccactgcctacgaccctcacctgctccgagccctcctcctcctct
tttacctcatcttctctcttcagctctgctccccccacccattttgtcat
cattgccatcctcaacccatcccgaggtgccagcccccaatttttatgtc
ccaacactcaccgccccctccctccctccctccctccctcccccccagCT
ATAAGCACGTGCACCGCAATCCGGAAGACGCTCCAGAGGAAGGCGAATTC
AATGTTTCTTCGCAAAAGGCAGCGGATGAAGCAGCAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCGACAGCGACAGCTGCTCTAGCAGGAGGAACGG
AGCTGAACAGCAGCTTTGCCCGCGGAGGGCCATCAGgtatgtttgtcctc
gagcccttccgcccttccttcctccctcttccccccctttctttcctctt
acttcctccttttactctccttcgaatcgccagtgtggaaaaggctctcc
ttccctccctctttccatccctgcctcgctctctcttcctcacgccgcag
tcattttcaaacaccgccatctttccacccctccaactccgtatctccct
ccctccctccctccctccctcctcacttccttactctcagGCAACGCAGG
CCCGTCGGTCGTTGGCGGTATGGGCACGGGGAGGGGGGGAGGGATGACAG
GCGAGGGACGAGGGGCAGGCGCGCAGCAGCAGCAGCAGCTACAGCTCCTC
GCCCTCCAGCAGCAGCAGCAGCTACTGCAACAGCAAGTACAGCGGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCAAGAGTCAGGAGGTCTCCCTTTCGGCG
TTGGGGCGGGGCCTGGAAGGGAGGGAGGGAGGGACCGGCGGCCGGGGGGG
GCGTTGGAGCGGAACGAGAATTATAAGACGACCCTATGCAATCACTGGCT
GAGCAATAAAgtgaggagggagggagggagggagggagggagggagggag
ggagggagggagggagggaatctcacacgtccggtgggtatccgactggg
acggacaagacatatccactcctcacctccctcccctccctccctcccct
cccttgcgcagGGCCTGTGCCCGTTTGGCGAGGACTGCGTGTTTGCCCAC
GGCGAGGCGGAGTTAAGGAAGCACCCTCTGGCCATTGCGCGCGAGCAGCA
GCAGGCGCACAGGGCCGTAGGGGGGGGACGAGgtaaggaggggagggagg
gagggagaggaatgaaggaagggaaaaggtgactccaccaagacgtgtct
ctgcacacgctctcactcacggatgtctcttcaaggtgtttgtcgtgctg
tggtactcgtccttctccacccaacgtgtcctcacattcgcccgactccc
taatcaaatccgccccttcccagGTGCTGGGGGTCTCTACGGCAACGGCG
CCGGTGGAGCTGGCAGCCTGACCGGAGCCTCCCTCGGAGGAGTGGGGGGG
ATGGGAGGAGGGGCGGGGGGAGCACTGTTTAGGGGGGCGGGCATGGGCAC
GGGGAATGGAGGGATGCCTGGACCGCTTATTCCGGCGCCGCATGAGgtga
gggagggagagagagagggggggagggagggaggggggtgggagggagaa
aggatgcgaaggctttcaaaagagcagaaagtactggatttattttcgtc
ccctccctccctccctccctccctccctccctccccagATCCGGTTCGTG
GACCTGGGCATTCCCTGGCCGGAGCAAGCCCGCGTCCGTTTCTTCGTCAT
TAAGAGCCTCAACTACAAAAATTTGGCGCAGAGTGTACGGAGGGGCGTTT
GGCGCACGCACCGCAACAACGAGCGGACATTGAACGAGgtgggtgcgcct
cagcatcccctttccctccctccccccctccctcccttccttgctcccac
ggggactttctatctctttctccttcggccgtttcctcatcaaggttgtc
cccgcacctaaccctccctcctccctccctccctccctcccttttgcagG
CCTTCCGCACCTGCGACAAGGTCGTCCTCTTCTTCTCGGTCAACGAGTCG
GGCCACTGGCAGGGTGCCGCCGTCATGTCCTCCCTCATCCGCTCCCAGCC
ACACCCGCAACATTTGGCTCCCCTGCAGCTCCTCCAACACCACCAGGACG
gtatgttcctccctaactccctcgaggcgtattcttcttgccccttctgt
gccggtcttttttccacgctcacccttcctccctccctttccctccctcc
ctcagGCTGGACTGCAGAGTTCTCCCTGGAGTGGCTGCGGCTGGTGTCCT
TGCCCTTCCCCCACACGCGGCCCCTCCGGAACCCCCTCAACGACAACCTC
CCCATCTCCCGCTCACGgtaacctccctccctccctccctcccgccttcc
ctccttggccaccctccatccatccatacacctccccctctccacaccac
acacatttacctccctccctccctccctccctccctttcttcccccagCG
ATTGCCAGGAGCTGACCCCCGACATCGGTCGACAACTGCTTTATCTCATC
TACGCCTCCGCTGAGGTTTCTCTGGCCTTGGCCGGCGCCGAGGCCAGCAT
GCCGCCTgtaaggactccctccatccctccctccctccctccctcccctt
gccgttttccatcctctcacgtccttcccttccttccttcccttcctccc
ttccctcctcctccttcctcatcttccgcgtcccggtagGCCGGAGGTGA
CGGTGGTGCGGGTGGAGGTCCCTTTGGTTATGGCGGCGGCGGACTGATGG
ATGGGGGAGGAGGAGGAGGCGGAGGTGAAGGAGGGGGAGGGGGTGGGTTG
CAGCAGCAGGAGCAGGAGCAGCAGTACATGAGTGGTGGTGGTGGAGGAGG
AGGAGGAGGAGGAGGAGTGCAACAAGGAGGGGAGACGCGGGGAGGGGCCT
TGGGAGGGGGCGGAATTATCCCGTCTTTCCTGGGCGTGGTTTCATCTTCC
CCTGCACAGAGgtaggtgtgagtgatgcggtgtttctcgatgacacgcgt
gttccgccttcccgccctcttttagtccttcctttctttttcagTCATGT
TTTCACCCACCCTGCCCTCCTTCCTTCCCTCCCTCCCTCCTTCCCTTGTC
TCCAGGAGATGCTGGACGAGTGCTTGGGCCGTGGTCTCTTCTCTCTGCCG
GCCGGCGGGGCCTTGGAAAACTTTGCGAAAGAGgtgggtgttggggagag
ggagggaggaagggagggaggaaggggggcgtgctgtttgatggaaggaa
gagaaagcataaacgcgatgcctccgctttcgaccgcgccgtcttcagac
actcaccctccctccttccctcccccctccctcccccctccctcccccct
cccttcccagGTGGTGCTCCCCGGCACGACGCTCTTCCTGTCCAACGCCT
CGGACCGGACCATCTTCGGCATCTTCGAAGCCGTCTCCCCCGTGGCGTAC
AATCTAGAGCGGACAAGCACCAGCACCTCATACCCCGTGCAGgtacgccc
tccctccctccctccctttggtccttgcgggccctcccttatgctttatt
cagaacacatccgtttctcacccctccctccctccctccctcccttcctt
tctccctccttcccttccctagGTTCGCATCCGCTGCGCCCTGGAAGCCC
CTCCTCTAACGGAAGCCGACCCGGAAGTACGCTATCTCCTCGGTCCTCTC
CCTTCCTCCGCTCCACTCGGCCGCGCCGGCCCCTTGAGCGCCGAACAGgt
gagcacgctttccctccctccctcccttccgtccacccttcctcttattg
cctcccctcctccccccctccctccctctccccagACGCAACGCCTTGCC
AATCTCCTCGCGGTGCGTGCCGGGGCCCTTCCTCTCATCCCTCCCTCCAC
TCCTACATTCACTTCCTCCTCCGCCTCGTTTTCGTCCTCCTCCTCTTCCA
CCTCCTCCTCCTCCTTCTCCTCCTCCTCCTCCCTCTCCTCCTTCCTCCCC
CTCCGAAGCGGGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGCTGTTCGC
GTCCAACACCTCTTCCTCCGTCAGCGCCTCGACGAGTCCCGCCTCAACGA
ATTCCAACAGCCCCGGCAGCATCTACCGGCACCTCCCCTCCAACGCCCTC
CTTCAGCTACAGCAGCAGCAGCAGCAACAGCAGCGCCAGCAGCAGCAGCA
ACAGGAAGGTCGCTTGTTGCTGGAGGGTTTTGGTGGGGGAGGGCTCGGCA
Ggtaggcacgacgggagagagggagggggggaggttggccggtgcaatag
ccatttgttgcacttcatgacgcatccatcccgccgcacccctccctccc
tccctccctccctccctccctccctccctccctctctccctccctcggcc
cctggtcctcgtacagTGTGAAGGGGTCGTCCACCGCGACTACCAGCAGC
AGCAACAGCAGCAACAGCAGCAGCAACAGCATTGCGTCCTCCCTCGGTGG
CACCTCCGTCGGCTTTTCAGGAGGAAAAGCCGAATgtacgtcaccctcct
tcccttcctcccttctttcttccttccttccctccctccctgcccctgtt
cccttcccttattctcgcccttgactccccctctccctccctttctcctc
tcctccccctcactcccgcctctagCTACCCTCGGCAGCAGCCCGGGCGG
CAGCAGCAGCTCCCTCATCCTCCCCCCTCCCTTCGCGGGCGGGGCTCCTC
CGGGTATTCAGCTGCCAGCGTCGTGGCGACCGCTCTGA
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protein sequence of NO09G03910.1

>NO09G03910.1-protein ID=NO09G03910.1-protein|Name=NO09G03910.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1071bp
MFKCTRCWHVCPGRLARVRGSAIPAPPPSEKSLTERQMLHNDNSWRPFGG
AYLLILTTPSSLPYTAMAAGESGLDDELAALTFEIEGGGYNNGGGQEGSG
GLVPRDGRRGGRSMAPGSKNVVCIHYLVGMCALDKDCPYLHQYDLDRVPI
CPFGSKCVRDDDCPFKHVTEEDKTECVFYRQGFCMYGPFCRYKHVHRNPE
DAPEEGEFNVSSQKAADEAAAAAAAAAAAAATATAALAGGTELNSSFARG
GPSGNAGPSVVGGMGTGRGGGMTGEGRGAGAQQQQQLQLLALQQQQQLLQ
QQVQRQQQQQQQQQQESGGLPFGVGAGPGREGGRDRRPGGALERNENYKT
TLCNHWLSNKGLCPFGEDCVFAHGEAELRKHPLAIAREQQQAHRAVGGGR
GAGGLYGNGAGGAGSLTGASLGGVGGMGGGAGGALFRGAGMGTGNGGMPG
PLIPAPHEIRFVDLGIPWPEQARVRFFVIKSLNYKNLAQSVRRGVWRTHR
NNERTLNEAFRTCDKVVLFFSVNESGHWQGAAVMSSLIRSQPHPQHLAPL
QLLQHHQDGWTAEFSLEWLRLVSLPFPHTRPLRNPLNDNLPISRSRDCQE
LTPDIGRQLLYLIYASAEVSLALAGAEASMPPAGGDGGAGGGPFGYGGGG
LMDGGGGGGGGEGGGGGGLQQQEQEQQYMSGGGGGGGGGGGVQQGGETRG
GALGGGGIIPSFLGVVSSSPAQSHVFTHPALLPSLPPSFPCLQEMLDECL
GRGLFSLPAGGALENFAKEVVLPGTTLFLSNASDRTIFGIFEAVSPVAYN
LERTSTSTSYPVQVRIRCALEAPPLTEADPEVRYLLGPLPSSAPLGRAGP
LSAEQTQRLANLLAVRAGALPLIPPSTPTFTSSSASFSSSSSSTSSSSFS
SSSSLSSFLPLRSGGGREGGREGGLFASNTSSSVSASTSPASTNSNSPGS
IYRHLPSNALLQLQQQQQQQQRQQQQQQEGRLLLEGFGGGGLGSVKGSST
ATTSSSNSSNSSSNSIASSLGGTSVGFSGGKAESTLGSSPGGSSSSLILP
PPFAGGAPPGIQLPASWRPL*
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Synonyms
Publications