NO09G03910, NO09G03910 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO09G03910 vs. NCBI_GenBank
Match: EWM27410.1 (Zinc finger, CCCH-type [Nannochloropsis gaditana]) HSP 1 Score: 788.1 bits (2034), Expect = 3.400e-224 Identity = 563/806 (69.85%), Postives = 593/806 (73.57%), Query Frame = 0 Query: 67 MAAGESGLDDELAALTFEIEGGGYNNGGGQEGSGGLVPRDGRRGGRSMAPGSKNVVCIHYLVGMCALDKDCPYLHQYDLDRVPICPFGSXXXXXXXXXXXXXXXXXXTECVFYRQGFCMYGPFCRYKHVHRNPEDAPEEGEFNVSSQKXXXXXXXXXXXXXXXXXXXXXXXXXXTELNSSFARGGPSGNAGPSVVGGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREGGRDRRPGGALERNENYKTTLCNHWLSNKGLCPFGEDCVFAHGEAELRKHPLAIAREQQQAHRAVGGGRGAGGLYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMPGPLIPAPHEIRFVDLGIPWPEQARVRFFVIKSLNYKNLAQSVRRGVWRTHRNNERTLNEAFRTCDKVVLFFSVNESGHWQGAAVMSSLIRSQPHPQHLAPLQLLQHHQDGWTAEFSLEWLRLVSLPFPHTRPLRNPLNDNLPISRSRDCQELTPDIGRQLLYLIYASAEVSLALAGAEASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSFLGVVSSSPAQSHVFTHPALLXXXXXXXXCLQEMLDECLGRGLFSLPAGGALENFAKEVVLPGTTLFLSNASDRTIFGIFEAVSPVAYNLERTSTSTSYPVQVRIRCALEAPPLTEADPEVRYLLGPLPSSAPLGRAGPLSAEQTQRLANLLAVRAGALPL 873 MAAGES LDDELAAL+FEIE ++G G GLVPR G GGRSMAPGSKNVVCIHYLVGMCALDKDCPYLHQYDLDRVPICPFGSXXXXXXXXXXXXXXXXXXTECVFYRQGFCMYGPFCRYKHVHRNPEDAPE+GEFN+SSQK XXX + + G S G XXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXX RRPGGALERNENYKTTLCNHWLSNKGLCPFG+DCVFAHGE ELRKHPLAIAREQQQAHRA GGGRG G G L +IRF DLG+PWP+QARVRFFVIKSLNYKNLAQSVRRGVWRTHRNNERTLNEAFRTCDKVVLF+SVNESGHWQGAAVM+S IRSQ P HL PLQ+LQHHQDGWTAEFSLEWLRLVSLPFPHTRPLRNPLNDNLPISRSRDCQELTP+IGRQLLYLIY+S+EVSLAL GAEAS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXX P F G Q +F C +E LDECLGRGLFSLPAGGALE +AKEVVLPG+TLFL+NA+DRT+FGIFEA SPVAYNLERTSTST YP+QVRIRC LEAPPLTE+DP+VR +LGPLP+S+PLGRAGPLS QTQRLA LLA RA ALPL Sbjct: 1 MAAGESSLDDELAALSFEIEASSNSDGQDGRGDAGLVPRRG--GGRSMAPGSKNVVCIHYLVGMCALDKDCPYLHQYDLDRVPICPFGSXXXXXXXXXXXXXXXXXXTECVFYRQGFCMYGPFCRYKHVHRNPEDAPEQGEFNISSQK------------------AADEAXXXXXXGGNVSGEGNSYPPGAXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVVVPQQLQLLSMHQQQSQPQHGAASPFGLASXXXXXXXXXXXXXXXXXRRPGGALERNENYKTTLCNHWLSNKGLCPFGDDCVFAHGETELRKHPLAIAREQQQAHRA-GGGRG------------------------------------------ETDGREGGL---GRKIRFPDLGLPWPDQARVRFFVIKSLNYKNLAQSVRRGVWRTHRNNERTLNEAFRTCDKVVLFYSVNESGHWQGAAVMTSPIRSQQQPPHLPPLQMLQHHQDGWTAEFSLEWLRLVSLPFPHTRPLRNPLNDNLPISRSRDCQELTPEIGRQLLYLIYSSSEVSLALGGAEAS------LPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPLPRXXXXXXXXXXXXXXGIGQTFPVFSG-------QGFIF-------------PCTEETLDECLGRGLFSLPAGGALETYAKEVVLPGSTLFLANATDRTLFGIFEAASPVAYNLERTSTSTMYPLQVRIRCLLEAPPLTESDPDVRSILGPLPASSPLGRAGPLSENQTQRLATLLASRAKALPL 714
BLAST of NO09G03910 vs. NCBI_GenBank
Match: GAX24592.1 (cleavage and polyadenylation specificity factor subunit 4 [Fistulifera solaris]) HSP 1 Score: 174.5 bits (441), Expect = 1.800e-39 Identity = 176/764 (23.04%), Postives = 262/764 (34.29%), Query Frame = 0 Query: 116 PGSKNVVCIHYLVGMCALDKDCPYLHQYDLDRVPICPFGSXXXXXXXXXXXXXXXXXXTECVFYRQGFCMYGPFCRYKHVHRNPEDAPEEGEFNVSSQKXXXXXXXXXXXXXXXXXXXXXXXXXXTELNSSFARGGPSGNAGPSVVGGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREGGRDRRPGGALERNENYKTTLCNHWLSNKGLCPFGEDCVFAHGEAELRKHPLAIAREQQQAHRAVGGGRGAGGLYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMPGPLIPAPHEIRFVDLGIPWPEQARVRFFVIKSLNYKNLAQSVRRGVWRTHRNNERTLNEAFRTCDKVVLFFSVNESGHWQGAAVMSSLIRSQPHPQHLAPLQLLQHHQDGWTAEFSLEWLRLVSLPFPHTRPLRNPLNDNLPISRSRDCQELTPDIGRQLLYLIYASAEVSL--ALAGAEASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSFLGVVSSSPAQSHVFTHPALLXXXXXXXXCLQEMLDECLGRGLFSLPAGGALENFAKEVVLPGTTLFLSNASDRTIFGIFEAVSPVAYNLERT-------STSTSYPVQVRIRCALEAPPLTEADPEVRYLLGPLPSSAPLGRAGPLSAEQTQRLANLLAVRAGAL 871 P + VVC H+L +C C +LHQYDL ++PIC G EC FYR GFC++GPFCRYKH R ED P +F+V T++ ++ RRP A + NE YK +LC H+++ G CPFG+ C FAHGEAELR+ P + + G P P++ E + FF++++ ++LA S RG W + +NE F +V+LFF+V++S H QGAA++ S Q + + H + ++ +EW R L + L LP S ++ CQ+++ G L+ I+ + V+L + G E + L + ++ T P C + +DECLGRG+F LPA A + PG T+FL N +DR +FGIFEA++P N+E T +TS+ +PVQ+R+R +LE PPL + DP +L + + GR G L+ QT+ +A LLA + GAL Sbjct: 59 PRLRTVVCRHWLRDLCMKGAACEFLHQYDLSKMPICRHGD-RCKIKDCPFRHISEENRMECAFYRSGFCIHGPFCRYKHTKRPREDLPLVADFSVG----------------------------LTQMQAN------------------------------------------------------------------------------------NKEVTRRP--APKPNEFYKISLCKHFMA--GECPFGDSCHFAHGEAELRQFPKKTQEPETPTNE----------------------------ISEDLFSNVDQTTIEYYEGGASGGGKPIPIL----------------EPSEASFFILRAATQRDLALSTVRGEWYVQHKHAAKMNELFEAKTQVMLFFTVSDSRHIQGAAMLKSAAVYQ---------KSVDHGEASFSYRIQVEWYRTTELSIDTALEVAPDL--LLPTSTTQFCQDMSWKTGESLMKAIWNAPLVTLYESWTGEE-------------------------------------------------------------------------------DPPENLLDFKAPGDEENAWPTMPG----PGFIFGCSSDTMDECLGRGIFGLPAH---MKAAASNIQPGATIFLFNVTDRLLFGIFEALTPARMNIEPTAFSKNPKATSSPFPVQIRVRISLECPPLEDTDP----VLNDVLRTRGKGRIGALTHAQTEAVATLLASQCGAL 560
BLAST of NO09G03910 vs. NCBI_GenBank
Match: GAX19311.1 (cleavage and polyadenylation specificity factor subunit 4 [Fistulifera solaris]) HSP 1 Score: 170.2 bits (430), Expect = 3.400e-38 Identity = 173/762 (22.70%), Postives = 258/762 (33.86%), Query Frame = 0 Query: 116 PGSKNVVCIHYLVGMCALDKDCPYLHQYDLDRVPICPFGSXXXXXXXXXXXXXXXXXXTECVFYRQGFCMYGPFCRYKHVHRNPEDAPEEGEFNVSSQKXXXXXXXXXXXXXXXXXXXXXXXXXXTELNSSFARGGPSGNAGPSVVGGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREGGRDRRPGGALERNENYKTTLCNHWLSNKGLCPFGEDCVFAHGEAELRKHPLAIAREQQQAHRAVGGGRGAGGLYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMPGPLIPAPHEIRFVDLGIPWPEQARVRFFVIKSLNYKNLAQSVRRGVWRTHRNNERTLNEAFRTCDKVVLFFSVNESGHWQGAAVMSSLIRSQPHPQHLAPLQLLQHHQDGWTAEFSLEWLRLVSLPFPHTRPLRNPLNDNLPISRSRDCQELTPDIGRQLLYLIYASAEVSLALAGAEASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSFLGVVSSSPAQSHVFTHPALLXXXXXXXXCLQEMLDECLGRGLFSLPAGGALENFAKEVVLPGTTLFLSNASDRTIFGIFEAVSPVAYNLERT-------STSTSYPVQVRIRCALEAPPLTEADPEVRYLLGPLPSSAPLGRAGPLSAEQTQRLANLLAVRAGAL 871 P + VVC H+L +C C +LHQYDL ++PIC G EC FYR GFC++GPFCRYKH R ED P +F+V T++ ++ RRP A + NE YK +LC H+++ G CPFG+ C FAHGEAELR+ P ++ Q+ G P P++ E + FF++++ ++LA S RG W + LNE F +V+LFF+V++S H QGAA++ S + H + ++ ++W R L + L LP S ++ CQ+++ G L+ I+ + V+L + + + P +F C + +DECLGRG+F LPA A + PG T+FL N +DR +FGIFEA++P N+E T +TS+ +PVQ+R+R +LE PPL + DP +L + + GR G L+ QT+ +A LLA + GAL Sbjct: 59 PRLRTVVCRHWLRDLCMKGAACEFLHQYDLSKMPICRHGD-RCKIKDCPFRHISEENRMECAFYRSGFCIHGPFCRYKHTKRPREDLPLVADFSVG----------------------------LTQMQANNKEVA------------------------------------------------------------------------------------RRP--APKPNEFYKISLCKHFMA--GECPFGDSCHFAHGEAELRQFP----KKTQEPETLTN------------------------EISEDLFSNVDQTTIEYYEGGASGGGKPIPIL----------------EPSEASFFIVRAATQRDLALSTVRGEWYVQHKHAAKLNELFEAKTQVMLFFTVSDSRHIQGAAMLKSAAVYH---------KSADHGEASFSYRIQVDWYRTTELSIETALEVAPDL--LLPTSTTQYCQDMSWKTGESLMKAIWNAPLVTLYESWTGEADPPENLLDFKAPGEEELAW--------------------------------------------------------------------PTMPGPGFIF-------------GCSSDTMDECLGRGIFGLPAH---MKAAASNIQPGATIFLFNVTDRLLFGIFEALTPARMNIEPTAFSKNPKATSSPFPVQIRVRISLECPPLEDTDP----VLNDVLRTRGKGRIGALTHAQTEAVATLLASQCGAL 560
BLAST of NO09G03910 vs. NCBI_GenBank
Match: XP_002185604.1 (hypothetical protein PHATRDRAFT_50624 [Phaeodactylum tricornutum CCAP 1055/1] >EEC42902.1 hypothetical protein PHATRDRAFT_50624 [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 163.7 bits (413), Expect = 3.200e-36 Identity = 181/810 (22.35%), Postives = 283/810 (34.94%), Query Frame = 0 Query: 71 ESGLDDELAALTFEIEGGGYNNGGGQEGSGGLVPRDGRRGGRSMAPGSKNVVCIHYLVGMCALDKDCPYLHQYDLDRVPICPFGSXXXXXXXXXXXXXXXXXXTECVFYRQGFCMYGPFCRYKHVHRNPEDAPEEGEFNVSSQKXXXXXXXXXXXXXXXXXXXXXXXXXXTELNSSFARGGPSGNAGPSVVGGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREGGRDRRPGGALERNENYKTTLCNHWLSNKGLCPFGEDCVFAHGEAELRKHPLAIAREQQQAHRAVGGGRGAGGLYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMPGPLIPAPHEIRFVDLGIPWPEQARVRFFVIKSLNYKNLAQSVRRGVWRTHRNNERTLNEAFRT-CDKVVLFFSVNESGHWQGAAVMSSLIRSQPHPQHLAPLQLLQHHQDGWTAEFSLEWLRLVSLPFPHTRPLRNPLNDNLPISRSRDCQELTPDIGRQLLYLIYASAEVSLALAGAEASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSFLGVVSSSPAQSHVFTHPA--LLXXXXXXXXCLQEMLDECLGRGLFSLPAGGALENFAKEVVLPGTTLFLSNASDRTIFGIFEA-------VSPVAYNLERTSTSTSYPVQVRIRCALEAPPLTEADPEVRYLLGPLPSSAPLGRAGPLSAEQTQRLANLLAVRAGAL 871 E G+ + L L + EG + G + D P + VVC H+L +C C +LHQYDL ++P+C G ECVFY QGFC++GPFCRYKH+ R ED P +F + +++ +S + G A + NE YK +LC H+L +G CPF E+C FAHGE+ELRK P R+ + GG ++ G P P++ P+QA +F+++++ + +LA S + W R + + +N A++ +V++FF+V++S H QGAA++++ Q + + +D + SLEW R LP + + L LP S ++ CQ+++ G L+ I+ + V+L P L +P T PA + C + +DECLG G+F LP+ A + PG ++FL N +DR +FGIFEA + P A++ + S+ +PVQ+R+R +LE PPL + D +L + S GR GPL+ QT+ +A+LLA + GAL Sbjct: 28 EHGIPETLDPLPYRKEGSVFATGDEAKPVLTSAKHD---------PRLRTVVCRHWLRDLCMKGTACEFLHQYDLSKMPLCRHGE-RCKIKDCPFRHISEANRMECVFYSQGFCIHGPFCRYKHIRRAREDLPAVADFTLG----------------------------LSQMQAS------------------------------------------------------------------------------------KDGEKVTKRTAPKPNEFYKISLCKHFL--QGSCPFAENCHFAHGESELRKFP----RKDENEEEGDGGDELTDNMF----------------------VNQDTTTIDYFQGGASGGGKPNPILE--------------PDQA--KFYIVRAATHHDLAISTVQNEWYLQRKHAQAMNAAYQDGKHQVMIFFTVSDSNHIQGAALLTAPGVYQ---------KSSDNGKDPFCHRISLEWFRTTELPIETALGVASDL--LLPTSSTQYCQDMSSTTGESLMKAIWNAPLVTL----------------------------------------------------------------------------FESWSGEQEPPTPDALLTDFRAP------TDPAWPTIPGPGFIFGCSSDTMDECLGLGIFGLPSH---MKAAASSIRPGASIFLFNVTDRLLFGIFEALTHAKMNIEPSAFSKNPKAVSSPFPVQIRVRISLECPPLEDTDA----ILNDILRSRGQGRIGPLTHPQTEAVASLLANQCGAL 571
BLAST of NO09G03910 vs. NCBI_GenBank
Match: XP_008901778.1 (hypothetical protein PPTG_08803 [Phytophthora parasitica INRA-310] >ETI52344.1 hypothetical protein F443_04483 [Phytophthora parasitica P1569] >ETL45615.1 hypothetical protein L916_04321 [Phytophthora parasitica] >ETL98786.1 hypothetical protein L917_04201 [Phytophthora parasitica] >ETM51951.1 hypothetical protein L914_04303 [Phytophthora parasitica] >ETN12735.1 hypothetical protein PPTG_08803 [Phytophthora parasitica INRA-310] >ETO81119.1 hypothetical protein F444_04511 [Phytophthora parasitica P1976] >ETP22165.1 hypothetical protein F441_04455 [Phytophthora parasitica CJ01A1] >KUF82610.1 Cleavage and polyadenylation specificity factor subunit 4 [Phytophthora nicotianae]) HSP 1 Score: 160.6 bits (405), Expect = 2.700e-35 Identity = 184/817 (22.52%), Postives = 268/817 (32.80%), Query Frame = 0 Query: 75 DDELAALTFEI-----EGGGYNNGGGQEGSGGLVPRDGRRGGRSMAPGS---KNVVCIHYLVGMCALDKDCPYLHQYDLDRVPICPFGSXXXXXXXXXXXXXXXXXXTECVFYRQGFCMYGPFCRYKHVHRNPEDAPEEGEFNVSSQKXXXXXXXXXXXXXXXXXXXXXXXXXXTELNSSFARGGPSGNAGPSVVGGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREGGRDRRPGGALERNENYKTTLCNHWLSNKGLCPFGEDCVFAHGEAELRKHPLAIAREQQQAHRAVGGGRGAGGLYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMPGPLIPAPHEIRFVDLGIPWPEQARVRFFVIKSLNYKNLAQSVRRGVWRTHRNNERTLNEAFRTCDKVVLFFSVNESGHWQGAA-----VMSSLIRSQPHPQHLAPLQLLQHHQDG---WTAEFSLEWLRLVSLPFPHTRPLRNPLNDNLPISRSRDCQELTPDIGRQLLYLIYASAEVSLALAGAEASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSFLGVVSSSPAQSHVFTHPALLXXXXXXXXCLQEMLDECLGRGLFSLPAGGALENFAKEVVLPGTTLFLSNASDRTIFGIFEAVSPVAYNL------ERTSTSTSYPVQVRIRCALEAPPLTEADPEVRYLLGPLPSSAPLGRAGPLSAEQTQRLANLLAVRAGA 870 D+E L+F+ E G G+ +G +V G G A VVC H+L +C +C +LHQYD+ ++P C +G EC FY+QGFC +G CRY+H+ E+ PE +F + S+ E + R+ A NE +K +C HW G CPFG++C FAHGE ELR P +E+++A GG G G PGP +P + ++F+++S +Y NLA SV G W + + A T D+V L F+V S H+QG A M+S+ S ++ + DG W F +EWLR+ P+ N +L + + QEL + G L+ L++ ++ L E P F G PA T P + C + +DEC GR LF L E A++ V PGT LFL N SD+ + GIFEAVSP N+ + + +PVQVR L AP L +DP+++ ++G GPLS + TQ+LA++ A R+GA Sbjct: 9 DEEERRLSFDFEMLLPEDGDDRMDSGEHRNGAVVGVGGATFGHQAAKKDFKRGTVVCRHWLRALCMKGDNCEFLHQYDMSKMPECRWG-MECQVPECPFRHVPDEERVECAFYKQGFCSHGSSCRYRHIKLAREECPETADFALQSK-----------------------------------------------------------------------------------------------------------------VADEENVKRRK---AQPVNEFFKIAICKHW-EKMGSCPFGDECHFAHGETELRPFPKG-EKEEKEARAGRQGGHHGPGFNGADRQHQGPP--------------------------------PGPQLP--------------DDGKMAKYFLVQSASYLNLAHSVHHGRWAVPPAVLQQIKMASETSDEVFLLFAVGPSKHYQGVARLVNGAMASVDTSMGEDLSTG---IVPYEADGKAEWAGSFGIEWLRICECPWERLAQFE---NKHLAVPECPNGQELDAETGHALVRLLFNQPQIQLHYRSVE-----------------------------------------------------DEPKLPGGAEELATRRREAAESLFGAPGGPGFGG-----PAPRWQATQPGFV------FTCTTQTIDECFGRMLFGL--SQEQEGLAQQHVTPGTPLFLLNLSDQHLLGIFEAVSPAIVNMMPGAFCHGPNMPSPFPVQVRFAVMLNAPALPTSDPQIKQVIGDNGVD-----VGPLSLQVTQQLADVFAERSGA 583
BLAST of NO09G03910 vs. NCBI_GenBank
Match: ETK92234.1 (hypothetical protein L915_04355 [Phytophthora parasitica]) HSP 1 Score: 160.2 bits (404), Expect = 3.500e-35 Identity = 184/817 (22.52%), Postives = 268/817 (32.80%), Query Frame = 0 Query: 75 DDELAALTFEI-----EGGGYNNGGGQEGSGGLVPRDGRRGGRSMAPGS---KNVVCIHYLVGMCALDKDCPYLHQYDLDRVPICPFGSXXXXXXXXXXXXXXXXXXTECVFYRQGFCMYGPFCRYKHVHRNPEDAPEEGEFNVSSQKXXXXXXXXXXXXXXXXXXXXXXXXXXTELNSSFARGGPSGNAGPSVVGGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREGGRDRRPGGALERNENYKTTLCNHWLSNKGLCPFGEDCVFAHGEAELRKHPLAIAREQQQAHRAVGGGRGAGGLYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMPGPLIPAPHEIRFVDLGIPWPEQARVRFFVIKSLNYKNLAQSVRRGVWRTHRNNERTLNEAFRTCDKVVLFFSVNESGHWQGAA-----VMSSLIRSQPHPQHLAPLQLLQHHQDG---WTAEFSLEWLRLVSLPFPHTRPLRNPLNDNLPISRSRDCQELTPDIGRQLLYLIYASAEVSLALAGAEASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSFLGVVSSSPAQSHVFTHPALLXXXXXXXXCLQEMLDECLGRGLFSLPAGGALENFAKEVVLPGTTLFLSNASDRTIFGIFEAVSPVAYNL------ERTSTSTSYPVQVRIRCALEAPPLTEADPEVRYLLGPLPSSAPLGRAGPLSAEQTQRLANLLAVRAGA 870 D+E L+F+ E G G+ +G +V G G A VVC H+L +C +C +LHQYD+ ++P C +G EC FY+QGFC +G CRY+H+ E+ PE +F + S+ E + R+ A NE +K +C HW G CPFG++C FAHGE ELR P +E+++A GG G G PGP +P + ++F+++S +Y NLA SV G W + + A T D+V L F+V S H+QG A M+S+ S ++ + DG W F +EWLR+ P+ N +L + + QEL + G L+ L++ ++ L E P F G PA T P + C + +DEC GR LF L E A++ V PGT LFL N SD+ + GIFEAVSP N+ + + +PVQVR L AP L +DP+++ ++G GPLS + TQ+LA++ A R+GA Sbjct: 9 DEEERRLSFDFEMLLPEDGDDRMDSGEHRNGAVVGVGGATFGHQAAKKDFKRGTVVCRHWLRALCMKGDNCEFLHQYDMSKMPECRWG-MECQVPECPFRHVPDEERVECAFYKQGFCSHGSSCRYRHIKLAREECPETADFALQSK-----------------------------------------------------------------------------------------------------------------VADEENVKRRK---AQPVNEFFKIAICKHW-EKMGSCPFGDECHFAHGETELRPFPKG-EKEEKEARAGRQGGHHGPGFNGADRQHQGPP--------------------------------PGPQLP--------------DDGKMAKYFLVQSASYLNLAHSVHHGRWAVPPAVLQQIKMASETSDEVFLLFAVGPSKHYQGVARLVNGAMASVDTSMGEDLSTG---IVPYEADGKAEWAGSFGIEWLRICECPWERLAQFE---NKHLVVPECPNGQELDAETGHALVRLLFNQPQIQLHYRSVE-----------------------------------------------------DEPKLPGGAEELATRRREAAESLFGAPGGPGFGG-----PAPRWQATQPGFV------FTCTTQTIDECFGRMLFGL--SQEQEGLAQQHVTPGTPLFLLNLSDQHLLGIFEAVSPAIVNMMPGAFCHGPNMPSPFPVQVRFAVMLNAPALPTSDPQIKQVIGDNGVD-----VGPLSLQVTQQLADVFAERSGA 583
BLAST of NO09G03910 vs. NCBI_GenBank
Match: ETP50050.1 (hypothetical protein F442_04517 [Phytophthora parasitica P10297]) HSP 1 Score: 158.3 bits (399), Expect = 1.300e-34 Identity = 183/817 (22.40%), Postives = 267/817 (32.68%), Query Frame = 0 Query: 75 DDELAALTFEI-----EGGGYNNGGGQEGSGGLVPRDGRRGGRSMAPGS---KNVVCIHYLVGMCALDKDCPYLHQYDLDRVPICPFGSXXXXXXXXXXXXXXXXXXTECVFYRQGFCMYGPFCRYKHVHRNPEDAPEEGEFNVSSQKXXXXXXXXXXXXXXXXXXXXXXXXXXTELNSSFARGGPSGNAGPSVVGGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREGGRDRRPGGALERNENYKTTLCNHWLSNKGLCPFGEDCVFAHGEAELRKHPLAIAREQQQAHRAVGGGRGAGGLYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMPGPLIPAPHEIRFVDLGIPWPEQARVRFFVIKSLNYKNLAQSVRRGVWRTHRNNERTLNEAFRTCDKVVLFFSVNESGHWQGAA-----VMSSLIRSQPHPQHLAPLQLLQHHQDG---WTAEFSLEWLRLVSLPFPHTRPLRNPLNDNLPISRSRDCQELTPDIGRQLLYLIYASAEVSLALAGAEASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSFLGVVSSSPAQSHVFTHPALLXXXXXXXXCLQEMLDECLGRGLFSLPAGGALENFAKEVVLPGTTLFLSNASDRTIFGIFEAVSPVAYNL------ERTSTSTSYPVQVRIRCALEAPPLTEADPEVRYLLGPLPSSAPLGRAGPLSAEQTQRLANLLAVRAGA 870 D+E L+F+ E G G+ +G +V G G A VVC H+L +C +C +LHQYD+ ++P C +G EC FY+QGFC +G CRY+H+ E+ PE +F + S+ E + R+ A NE +K +C HW G CPFG++C FAHGE ELR P +E+++A GG G G PGP +P + ++F+++S +Y NLA SV G W + + A D+V L F+V S H+QG A M+S+ S ++ + DG W F +EWLR+ P+ N +L + + QEL + G L+ L++ ++ L E P F G PA T P + C + +DEC GR LF L E A++ V PGT LFL N SD+ + GIFEAVSP N+ + + +PVQVR L AP L +DP+++ ++G GPLS + TQ+LA++ A R+GA Sbjct: 9 DEEERRLSFDFEMLLPEDGDDRMDSGEHRNGAVVGVGGATFGHQAAKKDFKRGTVVCRHWLRALCMKGDNCEFLHQYDMSKMPECRWG-MECQVPECPFRHVPDEERVECAFYKQGFCSHGSSCRYRHIKLAREECPETADFALQSK-----------------------------------------------------------------------------------------------------------------VADEENVKRRK---AQPVNEFFKIAICKHW-EKMGSCPFGDECHFAHGETELRPFPKG-EKEEKEARAGRQGGHHGPGFNGADRQHQGPP--------------------------------PGPQLP--------------DDGKMAKYFLVQSASYLNLAHSVHHGRWAVPPAVLQQIKMASEMSDEVFLLFAVGPSKHYQGVARLVNGAMASVDTSMGEDLSTG---IVPYEADGKAEWAGSFGIEWLRICECPWERLAQFE---NKHLAVPECPNGQELDAETGHALVRLLFNQPQIQLHYRSVE-----------------------------------------------------DEPKLPGGAEELATRRREAAESLFGTPGGPGFGG-----PAPRWQATQPGFV------FTCTTQTIDECFGRMLFGL--SQEQEGLAQQHVTPGTPLFLLNLSDQHLLGIFEAVSPAIVNMMPGAFCHGPNMPSPFPVQVRFAVMLNAPALPTSDPQIKQVIGDNGVD-----VGPLSLQVTQQLADVFAERSGA 583
BLAST of NO09G03910 vs. NCBI_GenBank
Match: XP_024575234.1 (cleavage and polyadenylation specificity factor cpsf30-like [Plasmopara halstedii] >CEG38865.1 cleavage and polyadenylation specificity factor cpsf30-like [Plasmopara halstedii]) HSP 1 Score: 155.6 bits (392), Expect = 8.600e-34 Identity = 184/789 (23.32%), Postives = 267/789 (33.84%), Query Frame = 0 Query: 94 GGQEGSGGLVPRDGRRGGRSMAPGSKNVVCIHYLVGMCALDKDCPYLHQYDLDRVPICPFGSXXXXXXXXXXXXXXXXXXTECVFYRQGFCMYGPFCRYKHVHRNPEDAPEEGEFNVSSQKXXXXXXXXXXXXXXXXXXXXXXXXXXTELNSSFARGGPSGNAGPSVVGGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREGGRDRRPGGALERNENYKTTLCNHWLSNKGLCPFGEDCVFAHGEAELRKHPLAIAREQQQAHRAVGGGRGAGGLYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMPGPLIPAPHEIRFVDLGIPWPEQARV-RFFVIKSLNYKNLAQSVRRGVWRTHRNNERTLNEAFRTCDKVVLFFSVNESGHWQGAA-VMSSLIRSQPHP--QHLAPLQLLQHHQDG---WTAEFSLEWLRLVSLPFPHTRPLRNPLNDNLPISRSRDCQELTPDIGRQLLYLIYASAEVSLALAGAEASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSFLGVVSSSPAQSHVFTHPALLXXXXXXXXCLQEMLDECLGRGLFSLPAGGALENFAKEVVLPGTTLFLSNASDRTIFGIFEAVSPVAYNL------ERTSTSTSYPVQVRIRCALEAPPLTEADPEVRYLLGPLPSSAPLGRAGPLSAEQTQRLANLLAVRAGA 870 GG V +D +RG VVC H+L +C +C +LHQYD+ ++P C +G EC FY+QGFC +G CRY+H+ E+ PE +F + S+ E + R+ A NE +K +C HW G CPFG++C FAHG+ ELR P XXXXXXX HE R V G P P++ ++ ++F+++S +Y NLA SV W + + A ++ LFF+V S H+QG A V++ I + LA L ++ + DG W FS+EWLR+ P+ N L L + + EL D G L+ L+Y ++ L E P F G S+P + V T P + C+ + +DEC GR LF LP + A++ V PGT L+L N SD+ + GIFEA+SP N+ + S+ +PVQ R L AP L +DP+++ +LG AGPLS + TQ+LA++ A R+GA Sbjct: 45 GGATFGQTTVKKDFKRG---------TVVCRHWLRALCMKGDNCEFLHQYDMSKMPECRWG-MECQVPECPFRHVPDEERVECAFYKQGFCSHGSSCRYRHIKLAREECPETADFALQSK-----------------------------------------------------------------------------------------------------------------VADEENVKRRK---AQPVNEFFKIAICKHW-EKVGSCPFGDECHFAHGDMELRPFP------------------------------------------------------KGEXXXXXXXXXXXXXXXXXHEAREVISGPPLPDEGKMAKYFLVQSASYLNLAHSVHYQQWSVPSGIAQQIKMAAEASYEIFLFFTVGSSKHYQGVARVVNEAIGDYDTSVGEDLA-LNVVPYEADGKCKWMGAFSIEWLRICECPWDRLAQFENKL---LTVPECPNGHELDSDTGHSLVRLLYNQPQIQLHYRSVE-----------------------------------------------------DEMKLLGGAEELATRRREAAESLFGAPIGPGFNG---SAPPRWKV-TQPGFV------FTCVAQTIDECFGRMLFGLPL--EQDTLAQQHVSPGTPLYLLNLSDQHLLGIFEAISPALVNMMPGAFCHGPNMSSPFPVQARFAVMLNAPALPISDPQIKQVLGDNKLD-----AGPLSLQITQQLADIFAERSGA 578
BLAST of NO09G03910 vs. NCBI_GenBank
Match: XP_002902266.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY56938.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 153.3 bits (386), Expect = 4.300e-33 Identity = 179/814 (21.99%), Postives = 265/814 (32.56%), Query Frame = 0 Query: 75 DDELAALTFEI-----EGGGYNNGGGQEGSGGLVPRDGRRGGRSMAPGS---KNVVCIHYLVGMCALDKDCPYLHQYDLDRVPICPFGSXXXXXXXXXXXXXXXXXXTECVFYRQGFCMYGPFCRYKHVHRNPEDAPEEGEFNVSSQKXXXXXXXXXXXXXXXXXXXXXXXXXXTELNSSFARGGPSGNAGPSVVGGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREGGRDRRPGGALERNENYKTTLCNHWLSNKGLCPFGEDCVFAHGEAELRKHPLAIAREQQQAHRAVGGGRGAGGLYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMPGPLIPAPHEIRFVDLGIPWPEQARVRFFVIKSLNYKNLAQSVRRGVWRTHRNNERTLNEAFRTCDKVVLFFSVNESGHWQGAA--VMSSLIRSQPHPQHLAPLQLLQHHQDG---WTAEFSLEWLRLVSLPFPHTRPLRNPLNDNLPISRSRDCQELTPDIGRQLLYLIYASAEVSLALAGAEASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSFLGVVSSSPAQSHVFTHPALLXXXXXXXXCLQEMLDECLGRGLFSLPAGGALENFAKEVVLPGTTLFLSNASDRTIFGIFEAVSPVAYNL------ERTSTSTSYPVQVRIRCALEAPPLTEADPEVRYLLGPLPSSAPLGRAGPLSAEQTQRLANLLAVRAGA 870 D+E L+F+ E G G+ +G +V G G A VVC H+L +C +C +LHQYD+ ++P C +G EC FY+QGFC +G CRY+H+ E+ PE +F + ++ E + R+ A NE +K +C HW G CPFG++C FAHGE ELR P +E+++A GG G PGP +P + ++F+++S +Y NLA SV W + + A T D+V LFF+V S H+QG A V ++ + ++ + DG W F +EWLR+ P+ N L +S + QEL + G L+ L++ ++ L E P F G PA + P + C + +DEC GR LF L E A++ V PGT LFL N SD+ + GIFEAVSP N+ + + +PVQ R L AP L +DP+++ ++G GPLS + TQ+LA++ A R+GA Sbjct: 9 DEEERRLSFDFEMLLPEDGDDRMDSGEHRNGAVVGVGGATFGHQAAKKDFKRGTVVCRHWLRALCMKGDNCEFLHQYDMSKMPECRWG-MECQVPECPFRHVPDEERVECAFYKQGFCSHGSSCRYRHIKLAREECPETADFALQAK-----------------------------------------------------------------------------------------------------------------VADEENVKRRK---AQPVNEFFKIAICKHW-EKMGSCPFGDECHFAHGETELRPFPKG-EKEEKEARAGRPGGHQGPAFNGGDRPHQGPP--------------------------------PGPQLP--------------DDGKMAKYFLLQSASYLNLAHSVHHERWAVPPAVLQQIKMASETSDEVFLFFAVGPSKHYQGVARLVNGAMSSADASAGEDLAAGVVPYEADGKAEWAGSFGIEWLRICECPWERLAQFE---NKQLAVSECPNGQELDAETGHALVRLLFNQPQIQLHYRSVE-----------------------------------------------------DESKLPGGAEELATRRREAAESLFGAPAGPGFGG-----PAPRWQPSQPGFV------FACTTQTIDECFGRMLFGL--AQEHEGLAQQHVTPGTPLFLLNQSDQHLLGIFEAVSPAIVNMMPGAFCHGPNMPSPFPVQTRFAVMLNAPALPTSDPQIKRVIGDNGVD-----VGPLSLQATQQLADVFAERSGA 583
BLAST of NO09G03910 vs. NCBI_GenBank
Match: CCA17401.1 (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 149.1 bits (375), Expect = 8.100e-32 Identity = 173/775 (22.32%), Postives = 252/775 (32.52%), Query Frame = 0 Query: 121 VVCIHYLVGMCALDKDCPYLHQYDLDRVPICPFGSXXXXXXXXXXXXXXXXXXTECVFYRQGFCMYGPFCRYKHVHRNPEDAPEEGEFNVSSQKXXXXXXXXXXXXXXXXXXXXXXXXXXTELNSSFARGGPSGNAGPSVVGGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREGGRDRRPGGALERNENYKTTLCNHWLSNKGLCPFGEDCVFAHGEAELRKHPLAIAREQQQAHRAVGGGRGAGGLYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMPGPLIPAPHEIRFVDLGIPWPEQAR-VRFFVIKSLNYKNLAQSVRRGVWRTHRNNERTLNEAFRTCDKVVLFFSVNESGHWQGAA-VMSSLIRSQPHPQHLAPLQLLQHHQD---GWTAEFSLEWLRLVSLPFPHTRPLRNPLNDNLPISRSRDCQELTPDIGRQLLYLIYASAEVSLALAGAEASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSFLGVVSSSPAQSHVFTHPALL-------XXXXXXXXCLQEMLDECLGRGLFSLPAGGALENFAKEVVLPGTTLFLSNASDRTIFGIFEAVSPVAYNLERTSTSTS------YPVQVRIRCALEAPPLTEADPEVRYLLGPLPSSAPLGRAGPLSAEQTQRLANLLAVRAG---ALPLIP 875 VVC H+L G+C C +LHQYD+ ++P C +G EC FYRQGFC +GP CRY+H+ E+ PE +F + S+ E RR + NE YK +C HW G CPFG++C FAHG+ ELR P R+ ++A GA + P+ H I F + P+ R +F++ S +Y N+A SV W + + L E + D V LF +V S H+QG V +I+ P ++ + D W F +EWLR+ P+ + + L + + L D GR+ ++++++ ++ L E +F V A + V+++P L C +DEC GR LF L G E AK+ V+PGT LFL N SDR + GIFEAVSP N+ + S S +PVQ R L APP++ +P ++ L G R GP++ TQ+LA++ A R G A P IP Sbjct: 62 VVCRHWLRGLCMKGDSCEFLHQYDMSKMPECRWG-MECQVPECPFRHVPDEDRMECAFYRQGFCSHGPNCRYRHIKLAREECPETADFALQSK------------------------------------------------------------------------------------------------------------------VAEEENVKRRKTQPV--NEFYKIAICKHW-EKLGSCPFGDECHFAHGDQELRPFP----RQNERAESVGFQKPGASDTF--------------------------------------------PINEPSHPIPFQEPQPRLPDADRNCAYFILHSFSYHNIAHSVHYHQWTLTDSPLQQLREIAGSYDVVFLFITVTSSRHFQGVVRVTKDIIQRLPSCGEDLASGIVPYQTDKRSSWEGVFPVEWLRICECPWEFFESIASKY---LFVPNAPKLIPLETDQGRKCMHILFSQPQIQLHYKSVEDEQTLIGG---------------------------------------------------------------------------AFELAVRRREAAASVYSNPNTLSTFHWRVSAPGFVFACNNLTIDECFGRLLFGL--GKDHEAIAKQHVVPGTPLFLLNMSDRHLLGIFEAVSPSVVNMVPNAFSHSPHQMSPFPVQTRFVVQLNAPPISTTEPMIKQLFGDRGV-----RIGPITLPVTQKLADIFAKRCGVVLAPPTIP 585 The following BLAST results are available for this feature:
BLAST of NO09G03910 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO09G03910 ID=NO09G03910|Name=NO09G03910|organism=Nannochloropsis oceanica|type=gene|length=6588bpback to top protein sequence of NO09G03910.1 >NO09G03910.1-protein ID=NO09G03910.1-protein|Name=NO09G03910.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1071bpback to top Synonyms
Publications
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