NO09G03870, NO09G03870 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO09G03870 vs. NCBI_GenBank
Match: EWM27414.1 (hypothetical protein Naga_100138g7 [Nannochloropsis gaditana]) HSP 1 Score: 265.8 bits (678), Expect = 1.500e-67 Identity = 137/176 (77.84%), Postives = 149/176 (84.66%), Query Frame = 0 Query: 99 AEIRRLLPLFLPSAALCLGATPPQPSYAFGEDIAAKVQKSLKEDTTKKYTDDGMDLVETLKKRTIQNKAKNDRILMEKTFLNSEAGIYGPFDKFIPVMRKDGQYVLLTEEEYKTLKNEGKIVGRDFVVDYEVASAPAAVEAPIVEEEDKKATSTGSSSQKPLEEDDADLFEDGEDV 275 A L+ + LPSAALC GA PPQP+ AFGEDIAAKVQKSL EDTTKKYT+DGMDLVETLK+RTIQNKAKNDRILMEKTFLNSEAGIYGPFDKFIPVM+KDGQYVLLTE++Y TLK EGKIVGRDFVVDY+ SAPAAVEAP++EEE QK LEEDDADLFEDG+ V Sbjct: 47 AIFHHLVAVVLPSAALCFGAVPPQPANAFGEDIAAKVQKSLNEDTTKKYTEDGMDLVETLKRRTIQNKAKNDRILMEKTFLNSEAGIYGPFDKFIPVMKKDGQYVLLTEDQYNTLKGEGKIVGRDFVVDYQAESAPAAVEAPVIEEEXXXXXXXXXXXQKTLEEDDADLFEDGDAV 222
BLAST of NO09G03870 vs. NCBI_GenBank
Match: EWM27415.1 (hypothetical protein Naga_100138g7 [Nannochloropsis gaditana]) HSP 1 Score: 226.5 bits (576), Expect = 1.000e-55 Identity = 116/154 (75.32%), Postives = 130/154 (84.42%), Query Frame = 0 Query: 99 AEIRRLLPLFLPSAALCLGATPPQPSYAFGEDIAAKVQKSLKEDTTKKYTDDGMDLVETLKKRTIQNKAKNDRILMEKTFLNSEAGIYGPFDKFIPVMRKDGQYVLLTEEEYKTLKNEGKIVGRDFVVDYEVASAPAAVEAPIVEEEDKKATST 253 A L+ + LPSAALC GA PPQP+ AFGEDIAAKVQKSL EDTTKKYT+DGMDLVETLK+RTIQNKAKNDRILMEKTFLNSEAGIYGPFDKFIPVM+KDGQYVLLTE++Y TLK EGKIVGRDFVVDY+V P+A +P+ + A+ T Sbjct: 47 AIFHHLVAVVLPSAALCFGAVPPQPANAFGEDIAAKVQKSLNEDTTKKYTEDGMDLVETLKRRTIQNKAKNDRILMEKTFLNSEAGIYGPFDKFIPVMKKDGQYVLLTEDQYNTLKGEGKIVGRDFVVDYQVGRLPSA-SSPLAHGGSRTASPT 199
BLAST of NO09G03870 vs. NCBI_GenBank
Match: XP_005854010.1 (hypothetical protein NGA_0184802 [Nannochloropsis gaditana CCMP526] >XP_005854320.1 hypothetical protein NGA_0184801 [Nannochloropsis gaditana CCMP526] >EKU22044.1 hypothetical protein NGA_0184801 [Nannochloropsis gaditana CCMP526] >EKU22347.1 hypothetical protein NGA_0184802 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 192.6 bits (488), Expect = 1.600e-45 Identity = 109/176 (61.93%), Postives = 119/176 (67.61%), Query Frame = 0 Query: 99 AEIRRLLPLFLPSAALCLGATPPQPSYAFGEDIAAKVQKSLKEDTTKKYTDDGMDLVETLKKRTIQNKAKNDRILMEKTFLNSEAGIYGPFDKFIPVMRKDGQYVLLTEEEYKTLKNEGKIVGRDFVVDYEVASAPAAVEAPIVEEEDKKATSTGSSSQKPLEEDDADLFEDGEDV 275 A LL + LPSAALC GA PPQP+ AFGEDIAAKVQKSL EDTTKKYT+DGMDLVETLK+R FIPVM+KDGQYVLLTEE+Y TLK EGKIVGRDFVVDY+ SAPAAVEAP++EEE QK LEEDDADLFEDG+ V Sbjct: 47 AVFHHLLAVVLPSAALCFGAVPPQPANAFGEDIAAKVQKSLNEDTTKKYTEDGMDLVETLKRR------------------------------FIPVMKKDGQYVLLTEEQYNTLKGEGKIVGRDFVVDYQAESAPAAVEAPVIEEEXXXXXXXXXXXQKTLEEDDADLFEDGDAV 192
BLAST of NO09G03870 vs. NCBI_GenBank
Match: GAX18112.1 (hypothetical protein FisN_25Hh093 [Fistulifera solaris]) HSP 1 Score: 66.2 bits (160), Expect = 1.800e-7 Identity = 35/98 (35.71%), Postives = 57/98 (58.16%), Query Frame = 0 Query: 145 KKYTDDGMDLVETLKKRTIQNKAKNDRILMEKTFLNSEAGIYGPFDKFIPVMRKDGQ-YVLLTEEEYKTLKNEGKIVGRDFVVDYEVASAPAAVEAPI 242 ++ + +L+E L++++I NK KN+ I+ +KTF N ++ +GPFDK + +M DGQ + LL + LK+ G I GR FV AA +A + Sbjct: 123 QRQEESANELIEKLRQQSIDNKEKNEMIVAQKTFENDQSATFGPFDKQVLIMNTDGQTFTLLNNPQAMRLKDAGFIQGRKFVKQPTADEIEAAAKAEV 220
BLAST of NO09G03870 vs. NCBI_GenBank
Match: GAX10056.1 (hypothetical protein FisN_25Lh093 [Fistulifera solaris]) HSP 1 Score: 66.2 bits (160), Expect = 1.800e-7 Identity = 35/98 (35.71%), Postives = 57/98 (58.16%), Query Frame = 0 Query: 145 KKYTDDGMDLVETLKKRTIQNKAKNDRILMEKTFLNSEAGIYGPFDKFIPVMRKDGQ-YVLLTEEEYKTLKNEGKIVGRDFVVDYEVASAPAAVEAPI 242 ++ + +L+E L++++I NK KN+ I+ +KTF N ++ +GPFDK + +M DGQ + LL + LK+ G I GR FV AA +A + Sbjct: 123 QRQEESANELIEKLRQQSIDNKEKNEMIVAQKTFENDQSATFGPFDKQVLIMNMDGQTFTLLNNPQAMRLKDAGFIQGRKFVKQPTADEIEAAAKAEV 220 The following BLAST results are available for this feature:
BLAST of NO09G03870 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 5
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO09G03870 ID=NO09G03870|Name=NO09G03870|organism=Nannochloropsis oceanica|type=gene|length=1999bpback to top protein sequence of NO09G03870.1 >NO09G03870.1-protein ID=NO09G03870.1-protein|Name=NO09G03870.1|organism=Nannochloropsis oceanica|type=polypeptide|length=276bpback to top Synonyms
Publications
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