NO09G03860, NO09G03860 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO09G03860 vs. NCBI_GenBank
Match: EWM27422.1 (glutathione s-transferase mu 1 [Nannochloropsis gaditana]) HSP 1 Score: 454.9 bits (1169), Expect = 1.900e-124 Identity = 224/294 (76.19%), Postives = 256/294 (87.07%), Query Frame = 0 Query: 1 MPKDDNKHTLLLAVAAIAATAGALAVPLSSLMRRAYIQHRHKRHTRFTLGSWRAREYGQAVRYLLAYLELPWQDRYFELGPAPDYNQLAWVDAKGEAARDKAEVPFSEQGLTTYLVMEERGWLKPKEGGKEGGGWGKKRKGVKHARTIMRCLGRQHGLIGRNVKEMEAVDLLLDELQDFNLAIHALVHSPSFLREKERFLTSVLPTRLRGFENWLLNEKRVHKKSTPTGGLWLVGGRLTVADFVMYDLLCQARTLCPSALTTLRELQDFTYRFESLPAIAAFLGSEACQLLPLY 295 M K +N HT+L AVAA AATAGALA PLSS++ RAY +HRH++HT FTLGSWRAREYGQAVRYLLAYLELPW+DR+F++GP PDY+QLAWVDAK EAA DKA VPFS QGLTTYLV+EERGW + G+EG KRKGVKHARTIMR LGRQ+GLIGRNVKEMEAVDLLLDELQDF LA+H LVH+PS+ REKERF T+ L +RL GFE+WLLNEK+ HKKS+PTGGLWLVGGR+TVADFV+YDLL QARTL P AL++ RELQDFTYRFE+LP+IA +LGSEACQLLPL+ Sbjct: 17 MSKTENNHTVLFAVAATAATAGALAGPLSSMVHRAYKRHRHRKHTHFTLGSWRAREYGQAVRYLLAYLELPWKDRFFDMGPGPDYHQLAWVDAKDEAAHDKAVVPFSAQGLTTYLVVEERGWC---QMGREG-----KRKGVKHARTIMRYLGRQYGLIGRNVKEMEAVDLLLDELQDFTLALHRLVHNPSYAREKERFFTTALASRLGGFEDWLLNEKKTHKKSSPTGGLWLVGGRMTVADFVLYDLLSQARTLYPPALSSHRELQDFTYRFEALPSIAQYLGSEACQLLPLF 302
BLAST of NO09G03860 vs. NCBI_GenBank
Match: XP_005854315.1 (glutathione S-transferase [Nannochloropsis gaditana CCMP526] >EKU22039.1 glutathione S-transferase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 349.4 bits (895), Expect = 1.100e-92 Identity = 172/229 (75.11%), Postives = 197/229 (86.03%), Query Frame = 0 Query: 1 MPKDDNKHTLLLAVAAIAATAGALAVPLSSLMRRAYIQHRHKRHTRFTLGSWRAREYGQAVRYLLAYLELPWQDRYFELGPAPDYNQLAWVDAKGEAARDKAEVPFSEQGLTTYLVMEERGWLKPKEGGKEGGGWGKKRKGVKHARTIMRCLGRQHGLIGRNVKEMEAVDLLLDELQDFNLAIHALVHSPSFLREKERFLTSVLPTRLRGFENWLLNEKRVHKKSTPTG 230 M K++N HT+L AVAA AATAGALA PLSS++ RAY +HRH++HT FTLGSWRAREYGQAVRYLLAYLELPW+DR+F++GP PDY+QLAWVDAK EAA DKA VPFS QGLTTYLV+EERGW + G+EG KRKGVKHARTIMR LGRQ+GLIGRNVKEMEAVDLLLDELQDF LA+H LVH+PS+ REKERF T+ L +RL GFE+WLLNEK+ HKKS+PTG Sbjct: 1 MSKNENNHTVLFAVAATAATAGALAGPLSSMVHRAYKRHRHRKHTHFTLGSWRAREYGQAVRYLLAYLELPWKDRFFDMGPGPDYHQLAWVDAKDEAAHDKAVVPFSAQGLTTYLVVEERGWC---QMGREG-----KRKGVKHARTIMRYLGRQYGLIGRNVKEMEAVDLLLDELQDFTLALHRLVHNPSYAREKERFFTTALASRLGGFEDWLLNEKKTHKKSSPTG 221
BLAST of NO09G03860 vs. NCBI_GenBank
Match: XP_015505857.1 (PREDICTED: glutathione S-transferase Mu 1 isoform X1 [Parus major]) HSP 1 Score: 124.4 bits (311), Expect = 6.000e-25 Identity = 72/251 (28.69%), Postives = 120/251 (47.81%), Query Frame = 0 Query: 48 TLGSWRAREYGQAVRYLLAYLELPWQDRYFELGPAPDYNQLAWVDAKGEAARDKAEVPFSEQGLTTYLVMEERGWLKPKEGGKEGGGWGKKRKGVKHARTIMRCLGRQHGLIGRNVKEMEAVDLLLDELQDFNLAIHALVHSPSFLREKERFLTSVLPTRLRGFENWLLNEKRVHKKSTPTGGLWLVGGRLTVADFVMYDLLCQARTLCPSALTTLRELQDFTYRFESLPAIAAFLGSEACQLLPLYTSRA 299 TLG W R A+R LL Y E P++D+ + G APDY++ W++ K + D +P+ G T + + I+R + R+H + G +E+ VD+L +++ DF +++ + ++P F + K +L LP +L+ F N+L + K W VG +LT DF+M+D+L Q R P L + L+DF RF +L +AA++ S Q +P+ A Sbjct: 4 TLGYWDIRGLAHAIRLLLEYTETPYEDKLYSCGEAPDYDKSQWINEKEKLGLDFPNLPYFIDGPTK----------------------------LTQSNAILRYIARKHNMCGETEEEILRVDMLENQIMDFRMSLVMVCYNPDFEKLKPGYLEQ-LPGKLKLFSNFLGDRK------------WFVGEKLTFVDFLMFDVLDQNRIFEPKCLEPFKNLKDFVERFGALEKVAAYMKSSRFQKMPINNKMA 213
BLAST of NO09G03860 vs. NCBI_GenBank
Match: XP_005530282.1 (PREDICTED: glutathione S-transferase Mu 1-like [Pseudopodoces humilis]) HSP 1 Score: 123.6 bits (309), Expect = 1.000e-24 Identity = 71/250 (28.40%), Postives = 119/250 (47.60%), Query Frame = 0 Query: 49 LGSWRAREYGQAVRYLLAYLELPWQDRYFELGPAPDYNQLAWVDAKGEAARDKAEVPFSEQGLTTYLVMEERGWLKPKEGGKEGGGWGKKRKGVKHARTIMRCLGRQHGLIGRNVKEMEAVDLLLDELQDFNLAIHALVHSPSFLREKERFLTSVLPTRLRGFENWLLNEKRVHKKSTPTGGLWLVGGRLTVADFVMYDLLCQARTLCPSALTTLRELQDFTYRFESLPAIAAFLGSEACQLLPLYTSRA 299 LG W R A+R LL Y E P++D+ + G APDY++ W++ K + D +P+ G T + + I+R + R+H + G +E+ VD+L +++ DF +++ + ++P F + K +L LP +L+ F N+L + K W VG +LT DF+M+D+L Q R P L + L+DF RF +L +AA++ S Q +P+ A Sbjct: 4 LGYWDIRGLAHAIRLLLEYTETPYEDKLYSCGEAPDYDKSQWINEKEKLGLDFPNLPYFIDGSTK----------------------------LTQSNAILRYIARKHNMCGETEEEILRVDMLENQIMDFRMSLVMICYNPDFEKLKPGYLEQ-LPGKLKLFSNFLGDRK------------WFVGEKLTFVDFLMFDVLDQNRIFEPKCLEPFKNLKDFVERFGALEKVAAYMKSSCFQKMPINNKMA 212
BLAST of NO09G03860 vs. NCBI_GenBank
Match: OWK56468.1 (Glutathione S-transferase Mu 5 [Lonchura striata domestica]) HSP 1 Score: 123.6 bits (309), Expect = 1.000e-24 Identity = 72/251 (28.69%), Postives = 119/251 (47.41%), Query Frame = 0 Query: 48 TLGSWRAREYGQAVRYLLAYLELPWQDRYFELGPAPDYNQLAWVDAKGEAARDKAEVPFSEQGLTTYLVMEERGWLKPKEGGKEGGGWGKKRKGVKHARTIMRCLGRQHGLIGRNVKEMEAVDLLLDELQDFNLAIHALVHSPSFLREKERFLTSVLPTRLRGFENWLLNEKRVHKKSTPTGGLWLVGGRLTVADFVMYDLLCQARTLCPSALTTLRELQDFTYRFESLPAIAAFLGSEACQLLPLYTSRA 299 TLG W R A+R LL Y E P++D+ + G APDY++ W++ K + D +P+ G T + + I+R + R+H + G +E+ VD+L +++ DF +++ + ++P F + K +L LP +L+ F N+L + K W G +LT DF+M+D+L Q R P L + L+DF RF +L +AA+L S Q +P+ A Sbjct: 4 TLGYWDIRGLAHAIRLLLEYTETPYEDKLYSCGEAPDYDKSQWINEKEKLGLDFPNLPYFIDGPTK----------------------------LTQSNAILRYIARKHNMCGETEEEILRVDMLENQIMDFRMSLVMVCYNPDFEKLKPGYLEQ-LPGKLKLFSNFLGDRK------------WFAGEKLTFVDFLMFDVLDQNRIFEPKCLEPFKNLKDFVERFGALEKVAAYLKSSRFQKMPINNKMA 213
BLAST of NO09G03860 vs. NCBI_GenBank
Match: XP_018777730.1 (PREDICTED: glutathione S-transferase Mu 3-like isoform X1 [Serinus canaria]) HSP 1 Score: 122.5 bits (306), Expect = 2.300e-24 Identity = 72/251 (28.69%), Postives = 118/251 (47.01%), Query Frame = 0 Query: 48 TLGSWRAREYGQAVRYLLAYLELPWQDRYFELGPAPDYNQLAWVDAKGEAARDKAEVPFSEQGLTTYLVMEERGWLKPKEGGKEGGGWGKKRKGVKHARTIMRCLGRQHGLIGRNVKEMEAVDLLLDELQDFNLAIHALVHSPSFLREKERFLTSVLPTRLRGFENWLLNEKRVHKKSTPTGGLWLVGGRLTVADFVMYDLLCQARTLCPSALTTLRELQDFTYRFESLPAIAAFLGSEACQLLPLYTSRA 299 TLG W R A+R LL Y E P++D+ + G APDY++ W++ K + D +P+ G T + + I+R + R+H + G +E VD+L +++ DF +++ + ++P F + K +L LP +L+ F N+L + K W G +LT DF+M+D+L Q R P L + L+DF RF +L +AA+L S Q +P+ A Sbjct: 4 TLGYWDIRGLAHAIRLLLEYTETPYEDKLYSCGEAPDYDKSQWINEKEKLGLDFPNLPYFIDGPTK----------------------------LTQSNAILRYIARKHNMCGETEEETLRVDMLENQIMDFRMSLVMVCYNPDFEKLKPGYLEQ-LPGKLKLFSNFLGDRK------------WFAGEKLTFVDFLMFDVLDQNRIFEPKCLEPFKNLKDFMERFGALEKVAAYLKSSRFQKMPINNKMA 213
BLAST of NO09G03860 vs. NCBI_GenBank
Match: XP_009095569.1 (PREDICTED: glutathione S-transferase Mu 3-like isoform X2 [Serinus canaria]) HSP 1 Score: 120.6 bits (301), Expect = 8.700e-24 Identity = 71/250 (28.40%), Postives = 117/250 (46.80%), Query Frame = 0 Query: 49 LGSWRAREYGQAVRYLLAYLELPWQDRYFELGPAPDYNQLAWVDAKGEAARDKAEVPFSEQGLTTYLVMEERGWLKPKEGGKEGGGWGKKRKGVKHARTIMRCLGRQHGLIGRNVKEMEAVDLLLDELQDFNLAIHALVHSPSFLREKERFLTSVLPTRLRGFENWLLNEKRVHKKSTPTGGLWLVGGRLTVADFVMYDLLCQARTLCPSALTTLRELQDFTYRFESLPAIAAFLGSEACQLLPLYTSRA 299 LG W R A+R LL Y E P++D+ + G APDY++ W++ K + D +P+ G T + + I+R + R+H + G +E VD+L +++ DF +++ + ++P F + K +L LP +L+ F N+L + K W G +LT DF+M+D+L Q R P L + L+DF RF +L +AA+L S Q +P+ A Sbjct: 4 LGYWDIRGLAHAIRLLLEYTETPYEDKLYSCGEAPDYDKSQWINEKEKLGLDFPNLPYFIDGPTK----------------------------LTQSNAILRYIARKHNMCGETEEETLRVDMLENQIMDFRMSLVMVCYNPDFEKLKPGYLEQ-LPGKLKLFSNFLGDRK------------WFAGEKLTFVDFLMFDVLDQNRIFEPKCLEPFKNLKDFMERFGALEKVAAYLKSSRFQKMPINNKMA 212
BLAST of NO09G03860 vs. NCBI_GenBank
Match: XP_013920028.1 (PREDICTED: glutathione S-transferase Mu 1-like [Thamnophis sirtalis]) HSP 1 Score: 120.6 bits (301), Expect = 8.700e-24 Identity = 70/250 (28.00%), Postives = 115/250 (46.00%), Query Frame = 0 Query: 49 LGSWRAREYGQAVRYLLAYLELPWQDRYFELGPAPDYNQLAWVDAKGEAARDKAEVPFSEQGLTTYLVMEERGWLKPKEGGKEGGGWGKKRKGVKHARTIMRCLGRQHGLIGRNVKEMEAVDLLLDELQDFNLAIHALVHSPSFLREKERFLTSVLPTRLRGFENWLLNEKRVHKKSTPTGGLWLVGGRLTVADFVMYDLLCQARTLCPSALTTLRELQDFTYRFESLPAIAAFLGSEACQLLPLYTSRA 299 LG W R ++R LL Y P++D+ + G APDY++ W++ K + D +P+ G T + + I+R + R+H L G+ +E+ VD+L +++ DF + + + ++P F + K +L LP +L+ F +L + K W G ++T DF+MYD+L Q R P L + LQDF RFE+L IAA++ S P+ A Sbjct: 3 LGYWDIRGLAHSIRLLLEYTGTPYEDKLYSCGEAPDYDKSQWINEKEKLGLDFPNLPYLIDGKTK----------------------------LTQSNAIIRYIARKHDLCGKTEEELNRVDMLENQVMDFRMGLAMICYNPDFEKLKPGYLEQ-LPGKLKLFSQFLGDRK------------WFAGDKITFVDFLMYDVLDQNRMFEPKCLDQFKNLQDFLTRFEALEKIAAYMSSSRFMKTPINNKMA 211
BLAST of NO09G03860 vs. NCBI_GenBank
Match: XP_020665670.1 (glutathione S-transferase Mu 1-like [Pogona vitticeps]) HSP 1 Score: 120.6 bits (301), Expect = 8.700e-24 Identity = 70/253 (27.67%), Postives = 116/253 (45.85%), Query Frame = 0 Query: 49 LGSWRAREYGQAVRYLLAYLELPWQDRYFELGPAPDYNQLAWVDAKGEAARDKAEVPFSEQGLTTYLVMEERGWLKPKEGGKEGGGWGKKRKGVKHARTIMRCLGRQHGLIGRNVKEMEAVDLLLDELQDFNLAIHALVHSPSFLREKERFLTSVLPTRLRGFENWLLNEKRVHKKSTPTGGLWLVGGRLTVADFVMYDLLCQARTLCPSALTTLRELQDFTYRFESLPAIAAFLGSEACQLLPLYTSRAAFN 302 LG W R ++R LL Y P++D+ + G APDY++ W + K + D +P+ G T + + I+R + R+H + G + EM VD+L +++ DF +++ + ++P F + K +L LP +L+ F +L + K W G ++T DF+MYD+L Q R P L + LQDF RFE+L +AA++ S P+ A +N Sbjct: 5 LGYWDIRGLAHSIRLLLEYTGTPYEDKLYSCGEAPDYDKSQWTNEKEKLGLDFPNLPYLIDGKTK----------------------------LTQSNAILRYIARKHNMCGESEDEMIRVDMLENQVMDFRMSLVMICYNPDFEKLKPGYLEQ-LPGKLKLFSQFLGDRK------------WFAGDKITFVDFLMYDVLDQNRMFEPKCLDQFKNLQDFLTRFEALEKVAAYMSSSRFMKTPINNKMAKWN 216
BLAST of NO09G03860 vs. NCBI_GenBank
Match: XP_010583076.1 (PREDICTED: glutathione S-transferase Mu 1-like [Haliaeetus leucocephalus]) HSP 1 Score: 120.2 bits (300), Expect = 1.100e-23 Identity = 71/251 (28.29%), Postives = 118/251 (47.01%), Query Frame = 0 Query: 48 TLGSWRAREYGQAVRYLLAYLELPWQDRYFELGPAPDYNQLAWVDAKGEAARDKAEVPFSEQGLTTYLVMEERGWLKPKEGGKEGGGWGKKRKGVKHARTIMRCLGRQHGLIGRNVKEMEAVDLLLDELQDFNLAIHALVHSPSFLREKERFLTSVLPTRLRGFENWLLNEKRVHKKSTPTGGLWLVGGRLTVADFVMYDLLCQARTLCPSALTTLRELQDFTYRFESLPAIAAFLGSEACQLLPLYTSRA 299 TLG W R A+R LL Y E P++D+ + G APDY++ W++ K + D +P+ G T + + IMR + R+H + G +E+ VD+L +++ DF +++ + ++P F + K +L LP +L+ F N+L + K W G +LT DF+M+D+L Q R P L + L+DF RF +L +AA++ S +P+ A Sbjct: 4 TLGYWDIRGLAHAIRLLLEYTETPYEDKLYSCGEAPDYDKSQWINEKEKLGLDFPNLPYFIDGTTK----------------------------LTQSNAIMRYIARKHKMCGETEEEILRVDMLENQIMDFRMSLVMVCYNPDFEKLKPGYLEQ-LPGKLKLFSNFLGDRK------------WFAGEKLTFVDFLMFDVLEQNRIFEPKCLEPFKNLKDFMDRFGALEKVAAYMKSSRFLKMPINNKMA 213 The following BLAST results are available for this feature:
BLAST of NO09G03860 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO09G03860 ID=NO09G03860|Name=NO09G03860|organism=Nannochloropsis oceanica|type=gene|length=2579bpback to top protein sequence of NO09G03860.2 >NO09G03860.2-protein ID=NO09G03860.2-protein|Name=NO09G03860.2|organism=Nannochloropsis oceanica|type=polypeptide|length=240bpback to top protein sequence of NO09G03860.1 >NO09G03860.1-protein ID=NO09G03860.1-protein|Name=NO09G03860.1|organism=Nannochloropsis oceanica|type=polypeptide|length=303bpback to top Synonyms
Publications
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