NO09G03810, NO09G03810 (gene) Nannochloropsis oceanica

Overview
NameNO09G03810
Unique NameNO09G03810
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4571
Alignment locationchr9:1092145..1096715 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:1092145..1096715 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
Homology
The following BLAST results are available for this feature:
BLAST of NO09G03810 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR056ncniR056Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G03810.2NO09G03810.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO09G03810.1NO09G03810.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|633595gene_9701Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G03810.2NO09G03810.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO09G03810.1NO09G03810.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G03810 ID=NO09G03810|Name=NO09G03810|organism=Nannochloropsis oceanica|type=gene|length=4571bp
CTCCCGAAAAGGAAATGGACAATGGCACTTGCAAAATGTAAGGCATGCAC
GCATATTTTGGTAATTTTATGTACTTAATTGTCATGTTTCCCTCGTTAAG
TCTTGCTTTACATCGCCCAAACCGCCCTCAGATCAGGCCAAAGGCAGCCA
ACTCCTCCGCGTTGCGTCCCTCGCCAAAAAAATCCAAGCCTTTCTGAGCG
ACGTGCGCCTTCCCCTGACCCATACGTATAGCTTCTACGCTGATCAAGCA
TAACAATTACTCAAACATACAGGTGTCTGTATGGACGATTTCTCCTCGTC
CCACTTGCCCTACCTTCGGACGCCCTTGCCCCGGAGGACTATGACCCTAA
CTGGCGAAGATGATTGGCGTAAGGGCACCTCCAACCATCCCCTTCCTACC
TACGGTCTCCCTCTTGGCTTAGATGCCCTCACGTCTGGTATCGGCGGTAG
TGACAGCAGCAGCAGCACCGTTACCACCACTTCGTACGGCAGCAGCGGCT
GTGGCAGCGTCTGGGGCACGCCCACAACGTCCCTTTCGGGCTCCCCGCCC
ACCAGCTATTTCATACCTCCTCATACACCCACTTCCCTCAACTCCGCCTG
CTCATTCCTCACGTCCTTTCCCTCGACGACTGTCACCATCCCTTCCAACC
TCTGGAGGTCCAAGACCCCTATCCTCCAGCGGTACGCAGTTGACTCCACC
TCTACTCCTACCTCCAACATGGGTGATCGTCTCCATCCCATCCATCCAAT
CGGCCGTACCTACCCTCCAAAACCTAACATAAACCACCCTCCTTTCCCCC
CGGCCATCGCAACCGTCATCCTTCCCGCCCTCGTTCCCCGCCTTACCCTC
CTCCTTCCCCTGGTGGAGCTGAACATCTTCTTGCAAGTCTCCAAGCAGCA
CCTGGCCTCCATGGCCCAATCGGGTGCCCTCAAAGCTCTTGCTGTCCGAC
ATCCTCGCGATAACAACAGCAGCAACAACAACAACAACAACACCATCAAC
AGCAATATTAGCTACAACAGGGAGGGTGGAGGAGGAGGGAAGCAGAGAGG
TAAGGAGAGGGGGGGCAAGGAAGGCACGCTCACCACTGGCGGCAAGAATG
ACGGCAGCCGGATGACAGGCACCACATACACTCCCACCAGCAGTTGCAAC
AGTTATGACAGCAGCTGTAGCAGACCACACCCCTTATCATCCATCTTGTC
CCGGTTTCAAACGGGCCTCCAGCTCCTGCGGGTGGCCGATCTGCGCGTCC
TCCCCGCCACACTCGACGCCTTAAACCAAGGCCTCCTCCCTCGCCTCTCC
CATCTATCCCTCACAAACCTCAACCTTCCTGACGACGAACTCGGTCGCCT
CTCTTCCCTCCTTGGCACTCGCTGGTACAACACCAACTCCACCGACCCCT
CCCCCCCTCCAGCCTTCCTCCTCCCCCACCTTGAATGCCTCGATCTGAGC
GGAAACCGTTTCGGAGACGTTGGCTTGATCAGTTTGGCCAGTCAGCTGCT
AGGAATGGGGGGGCTACCCCGCCTCACCACCCTTAATCTAGGCGCCAACG
GGCTGACACACTCGGGCCATGCACTTCTGGCTTTGGCTGCAGCGTTTGAG
GCCCGGGGGAGGGAGGGAAGGAAGGAGGGGGGGATGGGTGGGCAAGGCCA
AGGCCAGTGTGTGGGGCTGAAGAAGCTGGTGTTAGGCGCGTGGGTGTGGG
ATCGGACATCGCCATTTGCAGTTTGCACCAACTCTCACGAGCCGCAGCAG
CCGCAGCAGCCGCAGCAGCCGCAAGGCCCCTACTTCCCTCCTCTCACCTC
CATCCATGATCACCCCCTGCACCGCCTCCTCCTCTGCCTAGCCCCTAGCT
TGGAGGAGCTTGACCTTACCCATGCCTCTCTCCTGCCCAGTGAGCTCCAG
GCCCTCGCCGAGGCCTGGCGTCGCGTCCCTCCTCCCTCTCCACAGCTCTC
CCTCTTCTCCTCCCCCCTTTTCTCCCCACGGGTGCCCCTGCGTGTTCTTC
GGCTGAGCTTGGCCCACCGTCCCGCGCAGAAAGGCAACAGCAGCGGCAAC
AACTTGAATGTCCACAATCACGATAAAGAGGAGGACGAGGAGGAGAAACG
GAGGGAGGGTGGGCTGAATTCCCTCATGTCCGCTTTCAAAGAAGGCATCG
CACCCTTCCTCCATACTCTAGACATGTCCCATGGCCGACTGCACGGTCTT
CCCGTTCTCTCTCTTGCCGAAGCACTGCAGCAAAACGCCCTCCCCCTCCT
CCGCCATCTCCGCCTCGCCCACACGCACCTTACTTCTCACAGTTTCTCCC
TGCTCGTCCGGGCCATCTGCACGGCGAACCCGCCCCTCTTCCCTCACTCC
CTCCCTTTCTCCGGCAAGGGCCTCTCACTCGAAGCCCTCCTCCTCGAGGA
CAATCCTCAGTTGGGGCACACTGGCCTACAGGTACTGAGTCAATGCCTCC
AAGAAGGTGGCTTGGCCTCCCTCCGTACCCTCAACCTGAACGGCTCGAAA
TGTAACGAAAAATGGGATCGGGTGGGTGGAGGGAAGGAGGGCGGTTGAGA
GGCACCTCTTTGTGTACGGTTCCATACTTTCCGCCATCTCCTCCATTTCG
TGAAAAAGGGATACGTGTACATCCATTTACCTATTTCTCCCTTCCCTCCC
TCCCCCCACCCCCGTTCGTAGGCGCCGATTCCGGTCTTCGGGAGCTCAGC
CGCGTGCTGGATGGAGGCGCGCCTGCCGCTTCTTCCCTGCAGCATATCTA
CTTGGACGATTGCTCCATCACAGGCGAGGGCGTAGCTTGGTTAGGAGGCG
CCCTTGTCCGAGGTCGCCTCTGCAATCTCGTATCGCTGTCGTTGGCGCGG
AACCACGGCGTGGGGGAGGAGGGGGTGCGGTACCTCGTAAAATTTTTGGA
GGAGATGGGAGGGAGGTGCAGGCTGAATATGATCGACCTGCGCTGGACGA
ACATGGGCGTGGGGGGGGCTGgtaagtacattaacaaaaaatgttgtcct
tcatctttccttttcaccttccttctctgcctccgtccatctcatttccc
caagctctggagacaattatcttatgtcttcttccctccctccttctctc
tttccccccacccacagACGCACTGAGCCAAGTCCTGGAAGGTGGAAGCT
GCCCGGCCCTATCTCTAGCGATGCTCGCGCAGGGAGGAGCGCAGGGCACG
AGCTGGTCCTTCGAAACACGTAAATCCCTCCATCGCGTCCGGGGGGTTCT
CTTGTCAAGGGTCCTGGAGGGGAAGGCGCTGGAGATGGCCCTCGCGGTGG
GGGAAAGTGCGGGAGAAAAGAAGGAAGGGAAAGAAGGAGGGGTGGGGTTG
TTGAGGGCGGAGAGGATGAGTCGGAGACAGCAGCGGCAGATGCAGCAGCG
TGCAGGGCTGCCACGAGTAGTGTGTATCTAAGGAGATAGAAGGAAGGAGG
AAGGAAGGGAGGGAACGTTTCATGAATTCGAATGTGAATAAATCTGCATG
TGGATTTGTGTAGAGGCCATGTGTAAATAACGAGGGAGGGAGTGAGAAAG
ATTTTTAGGGGCGGCGATAAGAATCCTGCTGATTCGGATTGATGTGCGGG
GCAGATGAACCCAAAATACGCAGGTCGATAGTCCATTTACTATTTGGTGT
TTAAAGACGGCGGCAAAATGTTGCAAGGAGGAAAATTGATGGGAGAAAAA
GAGGAAGATTAAGAAGAAGCTAGAGAAAAAGAAGGAAAGGTAGAGAAGGA
GGGAAAAGAAGGAGAAGCAGAGGAAGAAGACGATGATGACGACGACAGAG
AGGTACGTGTACATCAATATGTATCTGCAGTGTGCCTCAATTCGCCGATG
CAGAGAACGTAAGAGGCTAACACACCGTACAGAGAATCAGCGCCAGTAGC
AGCAGCAGCAGCAGTAGCAGCAGTACCAGCAGTTGCTTTAGAAGGTGCAC
GATCGAGTGAGTGTTGCGTATCTACCCTTTATAGCTTATGTCTCTGCCCT
TCAACATCACTTTAATCAAAACCTAGTCGAAGAGAGGATCTTCAAAGGCG
ACACCTGCCGTGTGTAACAGAAATGGGGAGAATATGACGGCGGGGAGGTG
AGAGGGCAGTTGCAGTTGTCTGTGTATGCTTTGTGTTTAATGTGGGAGAA
AGAGCGGGGAATCATGCCGGAGCGAGGGTGCTGGAGTTCAAAATTGAGTT
TACATCTTCATTGAACATCAACATTTATCTGATTATATGAATTATATAAA
TATTTACATATGCACATTTGTGAGTGCATGAGTGTACATAGATATTTACA
TATGTGCATTTGTGAGTGCATGTGTGTAAATAAATATTTACATATGTGCA
TTTGTGAGTGCATGTGTGTAAATAAATATTTACATATGTGCATTTGTGAG
TGCATGTTTTTATACCTTAAGGAATGTAGAAAGAGAAAGAGACAGAGTGA
GTAAAAGAGAAGAAAATGCAAAGACTTAAAAAGGATTAGACAAAGAGAAA
GAGAAGAAGAAGTAGTAATAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA
GAAGAAATAAAAGAGGGGAAA
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protein sequence of NO09G03810.2

>NO09G03810.2-protein ID=NO09G03810.2-protein|Name=NO09G03810.2|organism=Nannochloropsis oceanica|type=polypeptide|length=756bp
MDDFSSSHLPYLRTPLPRRTMTLTGEDDWRKGTSNHPLPTYGLPLGLDAL
TSGIGGSDSSSSTVTTTSYGSSGCGSVWGTPTTSLSGSPPTSYFIPPHTP
TSLNSACSFLTSFPSTTVTIPSNLWRSKTPILQRYAVDSTSTPTSNMGDR
LHPIHPIGRTYPPKPNINHPPFPPAIATVILPALVPRLTLLLPLVELNIF
LQVSKQHLASMAQSGALKALAVRHPRDNNSSNNNNNNTINSNISYNREGG
GGGKQRGKERGGKEGTLTTGGKNDGSRMTGTTYTPTSSCNSYDSSCSRPH
PLSSILSRFQTGLQLLRVADLRVLPATLDALNQGLLPRLSHLSLTNLNLP
DDELGRLSSLLGTRWYNTNSTDPSPPPAFLLPHLECLDLSGNRFGDVGLI
SLASQLLGMGGLPRLTTLNLGANGLTHSGHALLALAAAFEARGREGRKEG
GMGGQGQGQCVGLKKLVLGAWVWDRTSPFAVCTNSHEPQQPQQPQQPQGP
YFPPLTSIHDHPLHRLLLCLAPSLEELDLTHASLLPSELQALAEAWRRVP
PPSPQLSLFSSPLFSPRVPLRVLRLSLAHRPAQKGNSSGNNLNVHNHDKE
EDEEEKRREGGLNSLMSAFKEGIAPFLHTLDMSHGRLHGLPVLSLAEALQ
QNALPLLRHLRLAHTHLTSHSFSLLVRAICTANPPLFPHSLPFSGKGLSL
EALLLEDNPQLGHTGLQVLSQCLQEGGLASLRTLNLNGSKCNEKWDRVGG
GKEGG*
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protein sequence of NO09G03810.1

>NO09G03810.1-protein ID=NO09G03810.1-protein|Name=NO09G03810.1|organism=Nannochloropsis oceanica|type=polypeptide|length=945bp
MDDFSSSHLPYLRTPLPRRTMTLTGEDDWRKGTSNHPLPTYGLPLGLDAL
TSGIGGSDSSSSTVTTTSYGSSGCGSVWGTPTTSLSGSPPTSYFIPPHTP
TSLNSACSFLTSFPSTTVTIPSNLWRSKTPILQRYAVDSTSTPTSNMGDR
LHPIHPIGRTYPPKPNINHPPFPPAIATVILPALVPRLTLLLPLVELNIF
LQVSKQHLASMAQSGALKALAVRHPRDNNSSNNNNNNTINSNISYNREGG
GGGKQRGKERGGKEGTLTTGGKNDGSRMTGTTYTPTSSCNSYDSSCSRPH
PLSSILSRFQTGLQLLRVADLRVLPATLDALNQGLLPRLSHLSLTNLNLP
DDELGRLSSLLGTRWYNTNSTDPSPPPAFLLPHLECLDLSGNRFGDVGLI
SLASQLLGMGGLPRLTTLNLGANGLTHSGHALLALAAAFEARGREGRKEG
GMGGQGQGQCVGLKKLVLGAWVWDRTSPFAVCTNSHEPQQPQQPQQPQGP
YFPPLTSIHDHPLHRLLLCLAPSLEELDLTHASLLPSELQALAEAWRRVP
PPSPQLSLFSSPLFSPRVPLRVLRLSLAHRPAQKGNSSGNNLNVHNHDKE
EDEEEKRREGGLNSLMSAFKEGIAPFLHTLDMSHGRLHGLPVLSLAEALQ
QNALPLLRHLRLAHTHLTSHSFSLLVRAICTANPPLFPHSLPFSGKGLSL
EALLLEDNPQLGHTGLQVLSQCLQEGGLASLRTLNLNGSKCADSGLRELS
RVLDGGAPAASSLQHIYLDDCSITGEGVAWLGGALVRGRLCNLVSLSLAR
NHGVGEEGVRYLVKFLEEMGGRCRLNMIDLRWTNMGVGGADALSQVLEGG
SCPALSLAMLAQGGAQGTSWSFETRKSLHRVRGVLLSRVLEGKALEMALA
VGESAGEKKEGKEGGVGLLRAERMSRRQQRQMQQRAGLPRVVCI*
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Synonyms
Publications