NO09G03550, NO09G03550 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO09G03550 vs. NCBI_GenBank
Match: EWM27447.1 (transmembrane protein [Nannochloropsis gaditana]) HSP 1 Score: 624.8 bits (1610), Expect = 1.900e-175 Identity = 290/371 (78.17%), Postives = 333/371 (89.76%), Query Frame = 0 Query: 12 QEHQPALDKHEAWPDPEEEGKDGNYRGYTMDVTASAVEEMQVGEENVQWAYRLIQLLDADTRLFLADGLLRKVEAFVATGTGPLSQWARRVMVIPENAKRLAELRRRVEVCRQAARDMRSDDWHLAHTEDGIETFSRKDEGDNTLAWRTHGEIEDCPVVSQLAVLREPDHYHRWIPLMDKSKVVKRLGKIEQMVWFRVAGTGIPFVRDAVLHLYGCDASEENLIILSGASMPESEITDEMDVRPPKKKWNHARVDIKYFSIQLKILSPTHCKIDLIYNLDVKLTLVPQAIINYFSKFTCGWVIWFLFQEMRRIQTDPVHNPTAQLMRSDPFYANYLVPYCLHLAHTKGWAVPDVPAFEVDRDCTTAKAWRQ 383 QE +++H+ WPDPE+EG+DG+YRGYTM+V A+ + +QVGEENVQ AYRL+QLLDADTRLFLAD LL+K+EAF TGTGP ++WA VM E+++RL ELRRRV+VCRQAARDM+S+DW LAHTE+GI+TF R+DEGDNTLAWRTHGEIEDCPVVSQLAVLRE DHYH WIPLMDKSKVVKRLGKIEQM+WFRVAG G+PFVRDAVLHLYGCDASEE+LIILSGAS+PE EIT+ M VRPPKKKWNHARVDIKYFSIQL+ILSPTH KIDLIY LDVK+ VPQ +INYFSKF CGWVIWFLFQEMRR+QTDPV +PTAQLMRS+PFYANYLVPYCL+LA+TKGW VP VPAFE+++DC +A+AWRQ Sbjct: 8 QERISFVNQHQPWPDPEKEGRDGSYRGYTMEVAANETQALQVGEENVQVAYRLVQLLDADTRLFLADDLLQKIEAFTRTGTGPQAEWAMHVMARSEDSQRLEELRRRVQVCRQAARDMQSEDWELAHTEEGIQTFLRRDEGDNTLAWRTHGEIEDCPVVSQLAVLREADHYHDWIPLMDKSKVVKRLGKIEQMLWFRVAGRGLPFVRDAVLHLYGCDASEEDLIILSGASIPEDEITESMGVRPPKKKWNHARVDIKYFSIQLRILSPTHTKIDLIYKLDVKIKFVPQKVINYFSKFLCGWVIWFLFQEMRRLQTDPVESPTAQLMRSEPFYANYLVPYCLNLAYTKGWEVPPVPAFEINKDCASAQAWRQ 378
BLAST of NO09G03550 vs. NCBI_GenBank
Match: CBJ32035.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 173.3 bits (438), Expect = 1.600e-39 Identity = 104/324 (32.10%), Postives = 176/324 (54.32%), Query Frame = 0 Query: 65 IQLLDADTRLFLADGLLRKVEAFVATG--TGPLSQWARRVMVIPENAKRLAELRRRVEVCRQAARDMRSDDWHLAHTEDGIETFSRKDEGDNTLAWRTHGEIEDCPVVSQLAVLREPDHYHRWIPLMDKSKVVKRLGKIEQMVWFRVAGTGIPFVRDAVLHLYGCDA-SEENLIILSGASMPESEITDEMDVRPPKKKWNHARVDIKYFSIQLKILSPTHCKIDLIYNLDVKLTLVPQAIINYFSKFTCGWVIWFLFQEMRRIQTDPVHNPTAQLMRSDPFYANYLVPYCLHLAHTKGWAVPD-----VPAFEVDRDCTTAKAW 381 +QL RL +A LL V+ ++A+G G ++ E E+R+R C+ + D +S DW +A T GI TF + D D +L + HG ++D V+ QLAV+RE D +++W+P D SK++KRLG +E +V+F ++ G+ RD VLH YGCD+ E I++ G S+ E+ + ++V P K W HAR+D++ F ++++LSPT + ++ N+D K VPQ+++N+ + G ++ L Q + I+ D + +++ FY +L P +GW V + PA ++ + T +AW Sbjct: 24 VQLCREQARLLVAGRLLAAVDRYLASGQHAGRQEVKEAHALLAGELKPLFDEVRQRAAECQSSLDDWQSPDWLVAQTFMGITTFYKVDP-DGSLWIKMHGTMDDVTVMDQLAVVREVDLFNKWVPFCDTSKLLKRLGIVELLVYFSMSIPGVG--RDCVLHAYGCDSVLETGCILIQGRSV--EEVPEGVEV-PQVKGWRHARMDVRAFRAKIEVLSPTSARTSIVANVDPKAP-VPQSVVNFVVRKMAGMFLYCLKQTAKCIRADEGNCHRRRIVEDKAFYKGWLFPRFERFYRRQGWTVDEELGGGEPASKLSDEPTGGRAW 340
BLAST of NO09G03550 vs. NCBI_GenBank
Match: EWM27457.1 (hypothetical protein Naga_100107g9 [Nannochloropsis gaditana]) HSP 1 Score: 172.2 bits (435), Expect = 3.500e-39 Identity = 73/93 (78.49%), Postives = 85/93 (91.40%), Query Frame = 0 Query: 290 LDVKLTLVPQAIINYFSKFTCGWVIWFLFQEMRRIQTDPVHNPTAQLMRSDPFYANYLVPYCLHLAHTKGWAVPDVPAFEVDRDCTTAKAWRQ 383 LDVK+ VPQ +INYFSKF CGWVIWFLFQEMRR+QTDPV +PTAQLMRS+PFYANYLVPYCL+LA+TKGW VP VPAFE+++DC +A+AWRQ Sbjct: 4 LDVKIKFVPQKVINYFSKFLCGWVIWFLFQEMRRLQTDPVESPTAQLMRSEPFYANYLVPYCLNLAYTKGWEVPPVPAFEINKDCASAQAWRQ 96
BLAST of NO09G03550 vs. NCBI_GenBank
Match: EWM25463.1 (START-like domain protein [Nannochloropsis gaditana]) HSP 1 Score: 133.7 bits (335), Expect = 1.400e-27 Identity = 99/328 (30.18%), Postives = 162/328 (49.39%), Query Frame = 0 Query: 42 DVTASAVEEMQVGEENVQWAYRLIQLLDADTRLFLADGLLRKVEAFVATGTGPLSQW---ARRVMVIPENAKRLAELRRRVEVCRQAARDMRS-DDWHLAHTEDGIETFSRKDEGDNTLAWRTHGEIEDCPVVSQLAVLREPDHYHRWIPLMDKSKVVKRLGKIEQMVWFRVAGTGIPFVRDAVLHLYGCDASEENLIILSGASMPESEITDEMDVRPPKKKWNHARVDIKYFSIQLKILSPTHCKIDLIYNLDVKLTLVPQAIINYFSKFTCGWVIWFLFQEMRRIQT--DPVHNPTAQLMRSDPFYANYLVPYCLHLAHTKGWAVP 364 D A+ + ++ +EN IQLL D RL +A+ L +K+EAFV PLSQ RR M ++LA L RR C +AA D+ S ++W LA G +TF R G+ + GE E + QL V+RE YHRW P + S +V +++ MV F + F RD ++ Y CD SE+++I++ G S+ ++ + + W R+ I F Q+++ K+ + +D + T +PQ++IN+ + G +++ L + +R+ D + Q++R DP+Y + +P L KGW P Sbjct: 64 DFDVPALYKTEITDENASRILAYIQLLTEDDRLMIAEDLRKKLEAFVK--EQPLSQVKENIRRQMQESPLQEQLALLSRRGVECLEAAEDLASRENWTLAFRTFGFDTFVR-PVGEQMYV-KVEGEQEGTSIFDQLLVVREAAMYHRWGPFVCSSALVHSFKQLDLMVTFEL--NAPLFHRDCLMRGYACDYSEKDMILICGDSVVPADY-PSLGLSTEPNGWLFKRMSITRFRCQVQLRGVNKGKVIMAALIDPR-TALPQSVINFCLQRIVGVLLYLLLRTAQRLNQAGDKLGADFLQVIRRDPYYFRHCLPRILWYCQQKGWEYP 383
BLAST of NO09G03550 vs. NCBI_GenBank
Match: GAX11088.1 (hypothetical protein FisN_9Hh178 [Fistulifera solaris]) HSP 1 Score: 133.7 bits (335), Expect = 1.400e-27 Identity = 90/313 (28.75%), Postives = 150/313 (47.92%), Query Frame = 0 Query: 79 GLLRKVEAFVATGTGPLSQWARRVMVIPENAKRLAELRRRVEVCRQAARDMRSD-DWHLAHTEDGIETFSRKDEGDNTLAWRTHGEIEDCPVVSQLAVLREPDHYHRWIPLMDKSKVVKRLGKIEQMVWFRVAGTGIPFVRDAVLHLYGCD-ASEENLIILSGASM---------PESEITDE------MDVRPPKKKWNHARVDIKYFSIQLKILSPTHCKIDLIYNLDVKLTLVPQAIINYFSKFTCGWVIWFLFQEMRRIQTDPVHNPTAQLMRSDP-FYANYLVPYCLHLAHTKGWAVPDVPAFEVDRD 374 GLL+K A + L Q A+ ++ E L +L + A +++ +D DW A GI T+ R++E D +L+ + GE+ P+ Q+AVLR D +++W+P S ++ +LGK++ + WF + RD GCD SE+ II++G + PE +++ P K + R+ I+ F + I SPT K ++ NL+ + + Q II++ K G V+ L +++ +PV N AQ MR +P FY +L+ KGW +P V AF V+ + Sbjct: 77 GLLKKENAALTKEQEEL-QLAKN--ILKEKESELHKLENVSRIFYGALKNLNTDEDWTFASLHFGITTYYRREE-DGSLSVKLEGELTGVPLFEQIAVLRAGDLHYKWVPFCSSSMIIAQLGKLDIINWFMIGIPQFGLARDGCYRAIGCDNMSEDGSIIIAGQGINDIMPGDHPPEDPFLSNDPAVFALNIPPAPTKRGNGRMTIRKFETVVNITSPTSAKTRIVANLNPNIAFLSQGIIDFALKHLAGVVLAKLQSAAKKVVKNPVTNHHAQQMREEPDFYQTWLMAKFKAFCDEKGWEMPRVSAFTVNEE 385
BLAST of NO09G03550 vs. NCBI_GenBank
Match: OQR94905.1 (transmembrane protein, partial [Thraustotheca clavata]) HSP 1 Score: 132.1 bits (331), Expect = 4.000e-27 Identity = 94/318 (29.56%), Postives = 162/318 (50.94%), Query Frame = 0 Query: 42 DVTASAVEE-------MQVGEENVQWAYRLIQLLDADTRLFLADGLLRKVEAFVATGTGPLSQWARRVMVIPENAKRLAELRRRVEVCRQAARDMRSD---DWHLAHTEDGIETFSRKDEGDNTLAWRTHGEIEDCPVVSQLAVLREPDHYHRWIPLMDKSKVVKRLGKIEQMVWFRVAGTGIPFV-RDAVLHLYGCDAS-EENLIILSGASMPESEITDEMDVRPPKKKWNHARVDIKYFSIQLKILSPTHCKIDLIYNLDVKLTLVPQAIINYFSKFTCGWVIWFLFQEMRRIQTDP-VHNPT---AQLMRSDPFY 344 D+ A A++E + VG ENVQW + IQ L + RLF A L+ K+E F++ G Q A ++ L++++ R + QA + D W A T G+ T + + D T+ + G E + + LAV+RE D +H W P ++S+++ LG++E + + +A IP + RDA++H +G +A+ E I+L G S+ E + PP K WN R+D++ F ++ + ++ N+ K VP ++N+ K G +++ L +E +I+ H+PT A+ +R+DPFY Sbjct: 415 DIEALALQETLVDYSHVVVGLENVQWVWTHIQYLINEERLFSAAPLIEKLEQFLSPRLGN-RQCADINQLVQGKLSELSQVKERSAMGHQALHEFNLDADAGWRFAQTYFGVSTHWKPGD-DGTIWLKLDGICEGVDIFNALAVIRETDLFHLWAPFCNRSELLANLGRVELIAYMSLA---IPLMQRDAIVHAFGINATYEHRCIVLLGKSITEDQCPVNNLEFPPIKGWNADRMDLRAFRALIEPYGRNRARTCIVVNVHPKCP-VPMTLLNFTIKKMAGILLYLLMREAGKIEKHKNEHDPTNEHAKRIRNDPFY 726
BLAST of NO09G03550 vs. NCBI_GenBank
Match: EJK43974.1 (hypothetical protein THAOC_37531, partial [Thalassiosira oceanica]) HSP 1 Score: 128.3 bits (321), Expect = 5.700e-26 Identity = 91/330 (27.58%), Postives = 140/330 (42.42%), Query Frame = 0 Query: 104 VIPENAKRLAELRRRVEVCRQAARDMRSDD------------WHLAHTEDGIETFSRKDEGDNTLAWRTHGEIEDCPVVSQLAVLREPDHYHRWIPLMDKSKVVKRLGKIEQMVWFRVAGTGIPFVRDAVLHLYGCDASEEN---LIILSG-----------------------------------------------ASMPESEITDEMDVRPPKKKWNHARVDIKYFSIQLKILSPTHCKIDLIYNLDVKLTLVPQAIINYFSKFTCGWVIWFLFQEMRRIQTDPVHNPTAQLMRSD-PFYANYLVPYCLHLAHTKGWAVPDVPAFEV 371 ++ E + A LRRR + A + D W A T G+ T R+ E D +L+ R G++ P+ QLA+LRE D YH W P S+ + +LG+++ W+ V RDA GCD E+ +I+ G +S+ EI +++ P R+ I+ FS ++ +L PT + ++ N+D L L+PQA+I++ K CG ++ L RR+ DPV N A+ MR D FY ++L+P KGW +P V AFEV Sbjct: 75 LLDEKSDEFALLRRRASLFLAAKETLSQHDKNDGEESDENTGWVHAQTLFGVSTHYRR-ESDGSLSIRIAGDLVGVPLFEQLAILREVDLYHAWAPFCVSSRKLAQLGRLDVAAWYDVGVPIFGLSRDACYRAVGCDGMAEDGSVMIVAVGLNDTDEHGVVSSASLGKQTRKRGPSXXXXXXXXXXAEGLEATEGSLLSSLARDEILSTLEMPPVPSGAGRGRMTIRNFSAKVDVLGPTSARTIMVVNVDPNLQLIPQALIDFSMKKMCGILLSRLQASARRVLKDPVGNAHARRMREDVTFYRDWLLPKFRAYCEAKGWNMPPVGAFEV 403
BLAST of NO09G03550 vs. NCBI_GenBank
Match: XP_002180706.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC48114.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 126.3 bits (316), Expect = 2.200e-25 Identity = 78/287 (27.18%), Postives = 137/287 (47.74%), Query Frame = 0 Query: 80 LLRKVEAFVATGTGPLSQWARRVMVIPENAKRLAELRRRVEVCRQAARDMRSDD-WHLAHTEDGIETFSRKDEGDNTLAWRTHGEIEDCPVVSQLAVLREPDHYHRWIPLMDKSKVVKRLGKIEQMVWFRVAGTGIPFVRDAVLHLYGCD-ASEENLIILSGAS---------------MPESEITDEMDVRPPKKKWNHARVDIKYFSIQLKILSPTHCKIDLIYNLDVKLTLVPQAIINYFSKFTCGWVIWFLFQEMRRIQTDPVHNPTAQLMRS-DPFYANYLV 349 ++RK A + T ++ N + +L RV + R+A ++ DD W A T GI+TF R++E D +L+ + GEIE P+ Q+ VL+E D +++W P S V L K++ + WF + RD GCD E+ I+L G + E I +++ + P K+ R+ I+ F + +LSPT K ++ N+D + +PQ+++ + K G ++ L +++ +PV N A+ MR + FY ++L+ Sbjct: 83 IIRKESAKLETEXXXXXXXXXAKEILNSNKAAIDKLENRVRIFRKALHNLNEDDEWTYASTHFGIKTFYRREE-DQSLSVKLEGEIEGVPLFEQICVLKEVDLHYKWAPFCSSSMTVADLDKLDTVGWFMIGLPHFGVARDGCFRAIGCDNIIEDGSILLVGQGVHDRPPDAPPPEDPFLSEDPILNDLGIPPVPKRRGSGRMTIRKFESVIHVLSPTSAKTRIVANIDPNMAFLPQSLLEFLMKHLAGVMLAKLQAATKKVLKNPVSNEHARKMREHEDFYKHWLM 368
BLAST of NO09G03550 vs. NCBI_GenBank
Match: EWM26881.1 (transmembrane protein [Nannochloropsis gaditana]) HSP 1 Score: 124.8 bits (312), Expect = 6.300e-25 Identity = 91/307 (29.64%), Postives = 142/307 (46.25%), Query Frame = 0 Query: 35 NYRGYTMDVTASA-VEEMQVGEENVQWAYRLIQLLDADTRLFLADGLLRKVEAFV--------ATGTG-------------------PLSQWARRVMVIPENAKRLAELRRRVEVCRQAARDMRSD-DWHLAHTEDGIETFSRKDEGDNTLAWRTHGEIEDCPVVSQLAVLREPDHYHRWIPLMDKSKVVKRLGKIEQMVWFRVAGTGIPFV--RDAVLHLYGCDASEENLIILSGASMPESE-------------------------ITDEMDVRPPKKKWNHARVDIKYFSIQLKILSPTHCKID 286 NY ++ ++ A A V+ + + E NVQ A+R +Q L D RL LA L K+ +F+ A TG P + R+ M P+ RL L RRV C +A S+ W A G+ T R E D TL R ++E+C V +LAVLRE D Y W P + S +V+ +GK E ++WF+ +P++ RDA +H++ CDA+E +++L G S+ E E +++ P WN AR++++ Q+++L P C +D Sbjct: 40 NYTFFSRNLDAVADVQHLTLTETNVQKAFRNLQCLVCDERLLLAHTLWHKLISFLGVTEAGVAAPETGLSECSKGVFPSPSRISPPTPNTDSVRQAMAHPQTRARLESLDRRVNACVEALDLFASETGWVFAQKYFGVSTHYRM-EDDGTLTVRLRADLEECSVFDELAVLREADLYPLWAPFVRASSLVQEVGKCELVIWFQFL---VPWLASRDACVHIFACDATERGVLLLCGQSIREGEGKGXXXXXXXXXXXAGGMEKVPLFDAIPGLNIPPLASGWNSARMEVRKCWCQIELLGPRACCVD 342
BLAST of NO09G03550 vs. NCBI_GenBank
Match: OEU22457.1 (hypothetical protein FRACYDRAFT_179309, partial [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 124.8 bits (312), Expect = 6.300e-25 Identity = 80/273 (29.30%), Postives = 133/273 (48.72%), Query Frame = 0 Query: 104 VIPENAKRLAELRRRVEVCRQAARDMR-SDDWHLAHTEDGIETFSRKDEGDNTLAWRTHGEIEDCPVVSQLAVLREPDHYHRWIPLMDKSKVVKRLGKIEQMVWFRVAGTGIPFVRDAVLHLYGCDASEEN---LIILSG-ASMPE---------------------SEITDEMDVRPPKKKWNHARVDIKYFSIQLKILSPTHCKIDLIYNLDVKLTLVPQAIINYFSKFTCGWVIWFLFQEMRRIQTDPVHNPTAQLMR-SDPFYANYLVP 350 ++ EN L ++ R + +A +++ +DDW A T G+ T+ RK E D +L+ + G +ED + +Q+AVLRE D + W P + S V L K++ + WF V +RDA GCD+ E+ L++ G A PE I D +D+ PP + + R+ I+ S Q+ I S T ++ N+D+ L +P ++++ K CG +++ + R+I DP+ N A MR D FY +L+P Sbjct: 128 LLDENEDILNKMEDRCRLFEKAKKNLDVNDDWTHAQTMFGVTTYYRK-ESDGSLSIKLEGTVEDASLFNQIAVLREIDLTYLWAPFVTSSMTVAHLDKLDTVGWFVVGLPHFGIMRDACFRAIGCDSMYEDGSVLLVAEGIADRPEDLDGDDKRDLNRTRIEDSLRTDPILDTLDLPPPPTRTGNGRMTIRSISAQIHIESATSSTTKIVANIDLNLPFIPPKLLDFIMKRMCGLILYKMQGAARKISRDPITNLHAIKMREDDDFYRRFLLP 399 The following BLAST results are available for this feature:
BLAST of NO09G03550 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
The following polypeptide feature(s) derives from this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO09G03550 ID=NO09G03550|Name=NO09G03550|organism=Nannochloropsis oceanica|type=gene|length=3439bpback to top protein sequence of NO09G03550.5 >NO09G03550.5-protein ID=NO09G03550.5-protein|Name=NO09G03550.5|organism=Nannochloropsis oceanica|type=polypeptide|length=415bpback to top protein sequence of NO09G03550.4 >NO09G03550.4-protein ID=NO09G03550.4-protein|Name=NO09G03550.4|organism=Nannochloropsis oceanica|type=polypeptide|length=377bpback to top protein sequence of NO09G03550.3 >NO09G03550.3-protein ID=NO09G03550.3-protein|Name=NO09G03550.3|organism=Nannochloropsis oceanica|type=polypeptide|length=406bpback to top protein sequence of NO09G03550.2 >NO09G03550.2-protein ID=NO09G03550.2-protein|Name=NO09G03550.2|organism=Nannochloropsis oceanica|type=polypeptide|length=417bpback to top protein sequence of NO09G03550.1 >NO09G03550.1-protein ID=NO09G03550.1-protein|Name=NO09G03550.1|organism=Nannochloropsis oceanica|type=polypeptide|length=365bpback to top Synonyms
Publications
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