NO09G03400, NO09G03400 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO09G03400 vs. NCBI_GenBank
Match: OQR87240.1 (hypothetical protein ACHHYP_09329 [Achlya hypogyna]) HSP 1 Score: 99.0 bits (245), Expect = 1.700e-17 Identity = 55/124 (44.35%), Postives = 72/124 (58.06%), Query Frame = 0 Query: 15 FTCRICRRELFTDKDLEPHAAGAQRINRRKLGSGTLSSAANATACTSYFLNEVALESLSWVRSALKAHDDAAEAGAEGIEGKLTCPNAKCGGRLGNFNWSGSQCSCGSWVVPAVQVVASKVDRK 139 + CR+CR +LFT +DL H RI+ RK + + C+SYFL E+L W+ AL A EGKL CP AKC RLG+F+WSGSQCSCG+WV P++Q+ S+VD K Sbjct: 15 YMCRMCRVKLFTSEDLLEHDPHQHRISLRKTIKERNPNGLH--ECSSYFLT----ETLPWMDEALLA------------EGKLHCPVAKCNARLGSFDWSGSQCSCGTWVTPSIQITKSRVDIK 120
BLAST of NO09G03400 vs. NCBI_GenBank
Match: ETP55117.1 (hypothetical protein F442_00283 [Phytophthora parasitica P10297]) HSP 1 Score: 98.2 bits (243), Expect = 2.800e-17 Identity = 57/127 (44.88%), Postives = 71/127 (55.91%), Query Frame = 0 Query: 11 SAISFTCRICRRELFTDKDLEPHAAGAQRIN-RRKLGSGTLSSAANATACTSYFLNEVALESLSWVRSALKAHDDAAEAGAEGIEGKLTCPNAKCGGRLGNFNWSGSQCSCGSWVVPAVQVVASKVD 137 S F C+ CR LFT + L PH +I+ RRKL S AN AC+SYFL E+LSW+ AL A EGK+ CP KC RLG WSGSQCSCG+WV P++++ S+VD Sbjct: 27 SVTKFACKKCRCVLFTSEQLMPHEPEQHQISARRKLKDLKHSVGAN-VACSSYFLE----ETLSWMDEALLA------------EGKIHCPTLKCQSRLGALQWSGSQCSCGTWVTPSIKITKSRVD 136
BLAST of NO09G03400 vs. NCBI_GenBank
Match: XP_008889851.1 (hypothetical protein PPTG_00227 [Phytophthora parasitica INRA-310] >ETN23686.1 hypothetical protein PPTG_00227 [Phytophthora parasitica INRA-310]) HSP 1 Score: 97.8 bits (242), Expect = 3.700e-17 Identity = 57/127 (44.88%), Postives = 71/127 (55.91%), Query Frame = 0 Query: 11 SAISFTCRICRRELFTDKDLEPHAAGAQRIN-RRKLGSGTLSSAANATACTSYFLNEVALESLSWVRSALKAHDDAAEAGAEGIEGKLTCPNAKCGGRLGNFNWSGSQCSCGSWVVPAVQVVASKVD 137 S F C+ CR LFT + L PH +I+ RRKL S AN AC+SYFL E+LSW+ AL A EGK+ CP KC RLG WSGSQCSCG+WV P++++ S+VD Sbjct: 27 SVTKFACKKCRCLLFTSEQLMPHEPEQHQISARRKLKDLKHSVGAN-VACSSYFLE----ETLSWMDEALLA------------EGKIHCPTLKCQSRLGALQWSGSQCSCGTWVTPSIKITKSRVD 136
BLAST of NO09G03400 vs. NCBI_GenBank
Match: OQR97387.1 (hypothetical protein THRCLA_21939 [Thraustotheca clavata]) HSP 1 Score: 97.1 bits (240), Expect = 6.300e-17 Identity = 53/125 (42.40%), Postives = 69/125 (55.20%), Query Frame = 0 Query: 15 FTCRICRRELFTDKDLEPHAAGAQRIN-RRKLGSGTLSSAANATACTSYFLNEVALESLSWVRSALKAHDDAAEAGAEGIEGKLTCPNAKCGGRLGNFNWSGSQCSCGSWVVPAVQVVASKVDRK 139 F CR+CR LFT DL H RI R+K+ G ++ C+SYFL+ ++ W+ L A EGKL CP KC RLG+F WSGSQCSCG+WV P++Q+ S+VD K Sbjct: 5 FVCRMCRVPLFTSVDLMEHEPHQHRIALRKKMKEGNINGVVE---CSSYFLS----DTKEWMDENLLA------------EGKLHCPKQKCNARLGSFEWSGSQCSCGTWVTPSIQITKSRVDIK 110
BLAST of NO09G03400 vs. NCBI_GenBank
Match: XP_009834796.1 (hypothetical protein H257_10057 [Aphanomyces astaci] >ETV75665.1 hypothetical protein H257_10057 [Aphanomyces astaci]) HSP 1 Score: 96.7 bits (239), Expect = 8.200e-17 Identity = 56/128 (43.75%), Postives = 73/128 (57.03%), Query Frame = 0 Query: 11 SAISFTCRICRRELFTDKDLEPHAAGAQRINRRKLGSGTLSSAANATACTSYFLNEVALESLSWVRSALKAHDDAAEAGAEGIEGKLTCPNAKCGGRLGNFNWSGSQCSCGSWVVPAVQVVASKVDRK 139 S + F CR+CR LFT DL H +I++RK S A C+S+FL +++ W+ D+A+ A EGKL CP AKC RLG+F WSGSQCSCG+WV P+VQ S+VD K Sbjct: 7 SKVEFVCRMCRVLLFTSDDLLQHEPQKHQISQRK---KLKESKLGAVDCSSFFL----VDTKEWM-------DEASLA-----EGKLLCPVAKCNARLGSFGWSGSQCSCGTWVTPSVQFTKSRVDVK 115
BLAST of NO09G03400 vs. NCBI_GenBank
Match: XP_008864845.1 (hypothetical protein H310_02928 [Aphanomyces invadans] >ETW06770.1 hypothetical protein H310_02928 [Aphanomyces invadans]) HSP 1 Score: 95.5 bits (236), Expect = 1.800e-16 Identity = 55/128 (42.97%), Postives = 72/128 (56.25%), Query Frame = 0 Query: 11 SAISFTCRICRRELFTDKDLEPHAAGAQRINRRKLGSGTLSSAANATACTSYFLNEVALESLSWVRSALKAHDDAAEAGAEGIEGKLTCPNAKCGGRLGNFNWSGSQCSCGSWVVPAVQVVASKVDRK 139 S + CR+CR LFT DL H +I++RK + A C+SYFL+ ++ W+ D+A+ A EGKL CP AKC RLG+F WSGSQCSCG+WV P+VQ S+VD K Sbjct: 41 SKAEYVCRMCRALLFTSDDLMEHEPQRHQISQRK---KLKEAKLGAVECSSYFLS----DTKEWM-------DEASLA-----EGKLFCPVAKCNSRLGSFGWSGSQCSCGTWVTPSVQFTKSRVDVK 149
BLAST of NO09G03400 vs. NCBI_GenBank
Match: POM68283.1 (Tyrosine protein phosphatase 2 [Phytophthora palmivora var. palmivora]) HSP 1 Score: 95.5 bits (236), Expect = 1.800e-16 Identity = 51/129 (39.53%), Postives = 67/129 (51.94%), Query Frame = 0 Query: 8 PHASAISFTCRICRRELFTDKDLEPHAAGAQRINRRKLGSGTLSSAANATACTSYFLNEVALESLSWVRSALKAHDDAAEAGAEGIEGKLTCPNAKCGGRLGNFNWSGSQCSCGSWVVPAVQVVASKVD 137 P S F C+ CR LFT + L H +I+ R+ C+SYFL E+LSW+ AL A EGK+ CP+AKC RLG WSGSQCSCG+WV P++++ S+VD Sbjct: 16 PEPSVTKFACKKCRCVLFTSEQLALHEPEQHQISARRKLKDLKHHVGTNVECSSYFLE----ETLSWMDEALLA------------EGKIHCPSAKCQARLGALQWSGSQCSCGTWVTPSIKITKSRVD 128
BLAST of NO09G03400 vs. NCBI_GenBank
Match: XP_012199968.1 (hypothetical protein SPRG_06007 [Saprolegnia parasitica CBS 223.65] >KDO29469.1 hypothetical protein SPRG_06007 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 93.2 bits (230), Expect = 9.100e-16 Identity = 50/124 (40.32%), Postives = 69/124 (55.65%), Query Frame = 0 Query: 15 FTCRICRRELFTDKDLEPHAAGAQRINRRKLGSGTLSSAANATACTSYFLNEVALESLSWVRSALKAHDDAAEAGAEGIEGKLTCPNAKCGGRLGNFNWSGSQCSCGSWVVPAVQVVASKVDRK 139 + CR+CR +LFT +DL H RI RK+ + C+S+F+ +++ W+ AL A EGKL CP KC RLG+F WSGSQCSCG+WV P++Q+ S+VD K Sbjct: 13 YVCRMCRFKLFTSEDLLEHEPHQHRIALRKMIKE--RNPNGVVDCSSFFM----ADTMPWMDEALLA------------EGKLHCPIKKCNARLGSFEWSGSQCSCGTWVTPSIQITKSRVDLK 118
BLAST of NO09G03400 vs. NCBI_GenBank
Match: CBN80064.1 (Dual specificity protein phosphatase [Ectocarpus siliculosus]) HSP 1 Score: 92.8 bits (229), Expect = 1.200e-15 Identity = 50/131 (38.17%), Postives = 69/131 (52.67%), Query Frame = 0 Query: 13 ISFTCRICRRELFTDKDLEPHAAGAQRINRRKLGSGTLSSAANATACTSYFLNEVALESLSWVRSALKAHDDAAEAGAEGIEGKLTCPNAKCGGRLGNFNWSGSQCSCGSWVVPAVQVVASKVDRKGREET 144 + + CR+CRR +F D+E H A RRK G S C+S FL+ E W++ +AG +EGKL+CPN CG RLG+ W+G+QCSCGSW+ PA+Q +D + R T Sbjct: 44 VVYNCRMCRRAVFNGADIEKHEAAQHNFRRRK-SKGVTSKG----PCSSIFLS----EPKRWMKQ---------QAGE--MEGKLSCPNKACGARLGSLKWTGAQCSCGSWITPAIQFPRKNLDARPRVST 154
BLAST of NO09G03400 vs. NCBI_GenBank
Match: XP_002998029.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY70375.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 92.8 bits (229), Expect = 1.200e-15 Identity = 49/127 (38.58%), Postives = 65/127 (51.18%), Query Frame = 0 Query: 10 ASAISFTCRICRRELFTDKDLEPHAAGAQRINRRKLGSGTLSSAANATACTSYFLNEVALESLSWVRSALKAHDDAAEAGAEGIEGKLTCPNAKCGGRLGNFNWSGSQCSCGSWVVPAVQVVASKVD 137 +S F C+ CR LF L PH +I+ R+ + AC+SYFL E+L W+ AL A EGK+ CP KC RLG WSGSQCSCG+WV P++++ S+VD Sbjct: 12 SSVTKFACKKCRSVLFKSDQLTPHEPEQHQISTRRKLKDLKHQVSAHVACSSYFLE----ETLPWMDEALLA------------EGKIHCPTLKCQSRLGALQWSGSQCSCGTWVTPSIKITKSRVD 122 The following BLAST results are available for this feature:
BLAST of NO09G03400 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO09G03400 ID=NO09G03400|Name=NO09G03400|organism=Nannochloropsis oceanica|type=gene|length=1129bpback to top protein sequence of NO09G03400.1 >NO09G03400.1-protein ID=NO09G03400.1-protein|Name=NO09G03400.1|organism=Nannochloropsis oceanica|type=polypeptide|length=185bpback to top Synonyms
Publications
|