NO09G03380, NO09G03380 (gene) Nannochloropsis oceanica
|
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO09G03380 vs. NCBI_GenBank
Match: EWM27481.1 (tho complex subunit [Nannochloropsis gaditana]) HSP 1 Score: 362.5 bits (929), Expect = 3.200e-96 Identity = 192/302 (63.58%), Postives = 223/302 (73.84%), Query Frame = 0
Query: 15 GDAEAALTQLEECIRTNYRKGASGLAVVRDLASAVATAEAGKPVAQDTDLVEVAFRAVLVGLVRESLAGRQDLLDEEKFGMRALLDLALGLAQGGGGE---GTGLRSVFFLLEDVFEFLGVEQIQTFWPEVEAREEALFALFKVARKSNLTMLKLCNSLLRKLSKSHNTAICGRIMMYLSRNWELSDPSAINKGGASNVGNKTVYEDSDEFAR-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIDYSLYQTFWGLQEDLSEPTRVMQSDDAWREFVGKAKEVLQAFEGFTVNQDSAA 313
GDAE A+ +LEECIR NY KG +G VVR+ A VA AEA +PV+ DTDL+EVAFRAVL G+V+E L +D+LDEEKFG+RALLDLAL LAQ G E G GLRSVFFLLED+FE LGVEQIQ FWPEVE RE ALF LFK ARKSNLTMLKLCNSLLRKLSK HNTAICGRIMMYLSRNWELSDPSAINKGG +N+ NKT +E+ ++FAR PIDYSLY+TFWGLQE +S+P R++QS++AW F+ AK VLQAFEGFTV++++ A
Sbjct: 14 GDAEGAICRLEECIRGNYCKGTAGWGVVRETAHEVAVAEADRPVSHDTDLIEVAFRAVLAGIVQEVLGKGEDVLDEEKFGLRALLDLALDLAQAGREEQEPGLGLRSVFFLLEDIFELLGVEQIQNFWPEVEKRESALFGLFKTARKSNLTMLKLCNSLLRKLSKGHNTAICGRIMMYLSRNWELSDPSAINKGGMANLSNKTAFEEPEDFARQQAREAEKTRRDEELRVAVEGRGGKEGGEEVDEEPIDYSLYKTFWGLQEHVSDPARLLQSEEAWSAFLRDAKVVLQAFEGFTVSEEAVA 315
BLAST of NO09G03380 vs. NCBI_GenBank
Match: EWM27484.1 (THO complex, subunit THOC1 [Nannochloropsis gaditana]) HSP 1 Score: 308.9 bits (790), Expect = 4.300e-80 Identity = 173/251 (68.92%), Postives = 205/251 (81.67%), Query Frame = 0
Query: 425 AYLGCKYLTNSRLFRLQLHDPLVRVQVLSQLLILLNYVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGAIEITKHARRLIRSTPTHGSTYLATLDTVLDREKAWLAWKKLQRCEPKIEKPRAPPAKATRTLDEVKKALAVAGKPTLVVAQQQRTFYGRALPLPRPVDLDAIEAEVGREGGRTWETYVKPRMEEAEDPEACIDEEYHPRHEPVFCWRALRLAWVADVKSVVGLKSGGLDGIWRRMTG 676
A+LGCKYLTNSRLFRLQLHDPL+R QVL+QLLI+LNY S XXXXXXXXXXXXXXXXXXXXX GA ++ KHARRLIR+T G+ YL LDTVL RE+AWL+WK+LQRCEP+IEKP APPA+ RT++ V++ALA AGKP+ VVAQQQ+ FYGR LP+PRPV+L +EAEVG GRT+E YV+PRMEEAEDPEACIDEEYHPRHEPVFCWRA+RL W AD + +VG+++ LD + R+M G
Sbjct: 3 AFLGCKYLTNSRLFRLQLHDPLIRTQVLTQLLIVLNYAS--------AXXXXXXXXXXXXXXXXXXXXXPKKGANDLVKHARRLIRNTSAQGAVYLGVLDTVLHREQAWLSWKRLQRCEPRIEKPPAPPARTVRTMEAVRQALAGAGKPSGVVAQQQKAFYGRPLPVPRPVNLAEVEAEVGEAVGRTFENYVRPRMEEAEDPEACIDEEYHPRHEPVFCWRAMRLGWAADARVLVGMENASLDALCRKMKG 245
BLAST of NO09G03380 vs. NCBI_GenBank
Match: XP_005854438.1 (THO complex subunit 1, partial [Nannochloropsis gaditana CCMP526] >EKU21921.1 THO complex subunit 1, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 305.4 bits (781), Expect = 4.700e-79 Identity = 157/213 (73.71%), Postives = 177/213 (83.10%), Query Frame = 0
Query: 15 GDAEAALTQLEECIRTNYRKGASGLAVVRDLASAVATAEAGKPVAQDTDLVEVAFRAVLVGLVRESLAGRQDLLDEEKFGMRALLDLALGLAQGG---GGEGTGLRSVFFLLEDVFEFLGVEQIQTFWPEVEAREEALFALFKVARKSNLTMLKLCNSLLRKLSKSHNTAICGRIMMYLSRNWELSDPSAINKGGASNVGNKTVYEDSDEFAR 225
GDAE A+ +LEECIR NY KG +G VVR+ A VA AEA +PV+ DTDL+EVAFRAVL G+V+E+L +D+LDEEKFG+RALLDLAL LAQ G G G GLRSVFFLLED+FE LGVEQIQ FWPEVE RE ALF LFK ARKSNLTMLKLCNSLLRKLSK HNTAICGRIMMYLSRNWELSDPSAINKGG +N+ NKT +E+ ++FAR
Sbjct: 14 GDAEGAICRLEECIRGNYCKGTAGWGVVRETAHEVAVAEADRPVSHDTDLIEVAFRAVLAGIVQEALGKGEDVLDEEKFGLRALLDLALDLAQAGREEQGPGLGLRSVFFLLEDIFELLGVEQIQNFWPEVEKRESALFGLFKTARKSNLTMLKLCNSLLRKLSKGHNTAICGRIMMYLSRNWELSDPSAINKGGMANLSNKTAFEEPEDFAR 226
BLAST of NO09G03380 vs. NCBI_GenBank
Match: XP_005854439.1 (tho complex subunit, partial [Nannochloropsis gaditana CCMP526] >EKU21922.1 tho complex subunit, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 166.8 bits (421), Expect = 2.600e-37 Identity = 110/158 (69.62%), Postives = 129/158 (81.65%), Query Frame = 0
Query: 425 AYLGCKYLTNSRLFRLQLHDPLVRVQVLSQLLILLNYVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGAIEITKHARRLIRSTPTHGSTYLATLDTVLDREKAWLAWKKLQRCEPKIEKPRAPPAKATRTLDEVKKALAVAGKPTLVVAQQQR 583
A+LGCKYLTNSRLFRLQLHDPL+R QVL+QLLI+LNY S XXXXXXXXXXXXXXXXXXXXX GA ++ KHARRLIR+T G+ YL LDTVL RE+AWL+WK+LQRCEP+IEKP APPA+ RT++ V++ALA AGKP+ VVAQQQ+
Sbjct: 10 AFLGCKYLTNSRLFRLQLHDPLIRTQVLTQLLIVLNYAS--------AXXXXXXXXXXXXXXXXXXXXXPKKGANDLVKHARRLIRNTSAQGAVYLGVLDTVLHREQAWLSWKRLQRCEPRIEKPPAPPARTVRTMEAVRQALAGAGKPSGVVAQQQK 159
BLAST of NO09G03380 vs. NCBI_GenBank
Match: GAX93040.1 (Hypothetical protein PINS_000945, partial [Pythium insidiosum]) HSP 1 Score: 141.0 bits (354), Expect = 1.500e-29 Identity = 155/646 (23.99%), Postives = 242/646 (37.46%), Query Frame = 0
Query: 56 KPVAQDTDLVEVAFRAVLVGLVRESLAGRQDLLDEEKFGMRALLDLALGLAQGGGGEGTGLRSVFFLLEDVFEFLGVEQIQTFWPEVEAREEALFALFKVAR-----KSNLTMLKLCNSLLRKLSKSHNTAICGRIMMYLSRNWELSDPSAINKGGASNVGNKTVYEDSDEFARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIDYSLYQTFWGLQEDLSEPTRVMQSDDAWREFVGKAKEVLQAFEGFTVNQDSAAASAVKGGVAAVGKKVGKAGGEEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTAYLGCKYLTNSRLFRLQLHDPLVRVQVLSQLLILLNYVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGAIEITKHARRLIRSTPTHGSTYLATLDTVLDREKAWLAWKKLQRCEPKIEKP-----------------------RAPPAKATRTLDE---------VKKALAVAGKPTLVVAQQQRTFYGRALPLPRPVDLDAIEAEVGREGGRTWETYVKPRMEEAEDPEACIDEEYHPRHEPVFCWRALRLAWVADVKSVVGLKSG 665
K Q ++++VA + V+ L L ++ G+ LLDL + G + + + LLED+ + + + W +E R+E L + + K++L +L+LCN+LLR++SK+HN+ CGRI+++LS + LS+ SA+N G N N T++ED DEF P+DY+LY+TFW LQ + V +S + W +F + VL AFEG + D S V A E + K LTNSRLFRLQL DP++R +L+Q LIL N+++ E+T +L+R TP+ G + L VL+RE+ W+ W KL++C P P AP A++ L +++ L+ + KPT ++ + + A+P+ ETY++ R EA DPE I+EEY P E +FCWR LR A ++V+ + K+G
Sbjct: 40 KATEQALNVLDVAVQKVVEALSWRLL--KEPEATPVSVGVPELLDLCI---DGIVHKCLNSTAAYKLLEDLMDGQTISTCEKLWEMLEERKERLSSSDFIPESGRPTKASLCLLRLCNALLRRVSKTHNSVFCGRILVFLSFTFSLSERSAVNLLGKPNTANTTLFEDQDEF----EAAEAHDSAQTSSAAVPSAVELDKERDPDAAPVDYNLYRTFWDLQRFCRDHQLVTKSVEDWEKFFEELNTVLSAFEGNAFSPDDXERSR----DLLVAPATPDASHEH-------------------------------------------------------------------------------------------FFQPKXLTNSRLFRLQLRDPIMRECMLTQFLILFNHLTKTKAPEGCQTPKSKLP--------------------ELTDRVMKLLRETPSDGKGFSEMLTIVLERERNWIKW-KLEKCPPYERLPTTAEEETAAKTAAVQPKKRRLGDAAPLGGASKRLRTGNNGGDSTLLEQILSESAKPTAILXKMKAPDRATAVPI---------------------ETYMQ-RFTEAWDPENGIEEEYWPDKEKLFCWRTLRAAMKSNVEHLHLAKNG 538
BLAST of NO09G03380 vs. NCBI_GenBank
Match: XP_024572922.1 (Nuclear matrix protein [Plasmopara halstedii] >CEG36553.1 Nuclear matrix protein [Plasmopara halstedii]) HSP 1 Score: 134.8 bits (338), Expect = 1.100e-27 Identity = 157/598 (26.25%), Postives = 233/598 (38.96%), Query Frame = 0
Query: 94 GMRALLDLA-LGLAQGGGGEGTGLRSVFFLLEDVFEFLGVEQIQTFWPEVEAREEALFALFKVAR-----KSNLTMLKLCNSLLRKLSKSHNTAICGRIMMYLSRNWELSDPSAINKGGASNVGNKTVYEDSDEFARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIDYSLYQTFWGLQEDLSEPTRVMQSDDAWREFVGKAKEVLQAFEGFTVNQDSAAAS--AVKGGVAAVGKKVGKAGGEEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTAYLGCKYLTNSRLFRLQLHDPLVRVQVLSQLLILLNYVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGAIEITKHARRLIRSTPTHGSTYLATLDTVLDREKAWLAWKKLQRCEPKIEKPRAPPAKATRTLDEVKKALAVAGKPTLVVAQQQRTFYGRALPLPRPVDLDA-----IEAEVGREGGRTWETYVK---PRMEEAEDPEACIDEEYHPRHEPVFCWRALRLAWVADVKSVVGLKSGGLDGIWRRMTG 676
G+ ALLDL +G+ G T + +LED+ E + + W +E R++ L +A K++L +L++CN+LLR+LSK+HN+ CGRI+M+LS + LS+ SA+N G +NV N TV+ED D F + PIDY+LY+TFW LQ E QS + W + + VL AFEG + D S A G + G+ G + KYLTNSRLFRLQL DP++R +L+Q LIL + ++ ++T L++ TP+ G Y + VL+RE+ W+ W KL++C P E R P A T + A P + ++Q T +L L + + + +E G+E R E +K R +EA DPE I+EEY P +FCWR +R A +VK + L G D + + + G
Sbjct: 81 GIPALLDLCIIGVTSGFLVNSTPYK----ILEDLMEGQTISTCEKVWVLLEIRKDKLTTPAFIAEKGRTTKASLCLLRMCNALLRRLSKTHNSVFCGRILMFLSFTFALSERSAVNLTGKANVTNVTVFEDEDAFDQ--------AEATDVIKASALRLEIDSGATVDASPIDYNLYRTFWDLQSFFREHQLATQSVENWEKLFTELNMVLAAFEGNAFSPDDLKRSEDANNGVNIKADVTLHAFDGDAGKSPIEPISQEH-------------------------------------------------------------------------------FFQPKYLTNSRLFRLQLRDPILRECMLTQFLILFSDMARIKPPADSTTPKAKF--------------------ADLTDRVVALLKQTPSDGEGYSEMVSYVLERERNWVKW-KLEKC-PGYE--RYPAAMENDT--------SAALTPDVKRPRRQLT----SLLLEQILSESSKPSKILEKIKGKE--RATEVSLKVYTDRFKEAWDPENGIEEEYWPDKNEMFCWRTMRAAMKTNVKH-LDLAVKGTDALVKGILG 548
BLAST of NO09G03380 vs. NCBI_GenBank
Match: XP_002905013.1 (THO complex subunit, putative [Phytophthora infestans T30-4] >EEY53395.1 THO complex subunit, putative [Phytophthora infestans T30-4]) HSP 1 Score: 125.9 bits (315), Expect = 5.100e-25 Identity = 146/568 (25.70%), Postives = 224/568 (39.44%), Query Frame = 0
Query: 94 GMRALLDLAL-GLAQGGGGEGTGLRSVFFLLEDVFEFLGVEQIQTFWPEVEAREEALFALFKVARKSNLTMLKLCNSLLRKLSKSHNTAICGRIMMYLSRNWELSDPSAINKGGASNVGNKTVYEDSDEFARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIDYSLYQTFWGLQEDLSEPTRVMQSDDAWREFVGKAKEVLQAFEGFTVNQDSAAAS--AVKGGVAAVGKKVGKAGGEEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTAYLGCKYLTNSRLFRLQLHDPLVRVQVLSQLLILLNYVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGAIEITKHARRLIRSTPTHGSTYLATLDTVLDREKAWLAWKKLQRCEPKIEKPRAPPAKATRTLDEVKKALAVAGKPTLVVAQQQRTFYGRALPLPRPVDLDA------IEAEVGREGGR--TWETYVKPRMEEAEDPEACIDEEYHPRHEPVFCWRALRLA 651
G+ ALLDL + G+ G T + +LED+ E + + W +E+R++ L K++L +L++CN+LLR+LSK+HN+ CG+I+++LS + LS+ SA+N G +NV N DSD A PIDY+LY+TFW LQ E QS + W +F + VL AFEG + D S +G + + + ++ G+ + KYLTNSRLFRLQL DP++R +L+Q LIL N ++ E+T+ L++ TP+ G + + VL+RE+ W+ WK+ ++C P E R P AK +K + A KP + A++Q T PL + ++ +E G+E + TY R +EA DPE I+EEY P + + CWR +R A
Sbjct: 81 GVPALLDLCIAGVTSGFLVNSTPYK----VLEDLMEGQTINTCEKVWDLLESRKDKLTT--GRTTKASLCLLRMCNALLRRLSKTHNSVFCGKILVFLSFTFALSERSAVNLTGKANVTN----IDSDPSA-------------------------------DVGPIDYNLYRTFWDLQGFFREHQMATQSAENWEKFFTELNVVLAAFEGNAFSPDDLERSRDLTEGPIHSADIAMHESDGDSDKNATDHNTQEH-------------------------------------------------------------------------------FFQPKYLTNSRLFRLQLRDPILRECMLTQFLILFNDLARAKPPLGSTTPKAK--------------------LAELTERVVALLKQTPSDGEGFSEMVTYVLERERNWVKWKQ-EKC-PGYE--RYPSAK--------EKDASTASKPVVKRARRQLT-----SPLLEQILSESSKPSQILEKIKGKERATEVSLATYT-DRFKEAWDPENGIEEEYWPDKDEMVCWRTMRAA 490
BLAST of NO09G03380 vs. NCBI_GenBank
Match: CCI43859.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 121.7 bits (304), Expect = 9.600e-24 Identity = 146/613 (23.82%), Postives = 221/613 (36.05%), Query Frame = 0
Query: 56 KPVAQDTDLVEVAFRAVLVGLVRESLAGRQDLLDEEKFGMRALLDLALGLAQGGGGEGTGLRSVFFLLEDVFEFLGVEQIQTFWPEVEAREEAL-----FALFKVARKSNLTMLKLCNSLLRKLSKSHNTAICGRIMMYLSRNWELSDPSAINKGGASNVGNKTVYEDSDEFARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIDYSLYQTFWGLQEDLSEPTRVMQSDDAWREFVGKAKEVLQAFEGFTVNQDSAAASAVKGGVAAVGKKVGKAGGEEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTAYLGCKYLTNSRLFRLQLHDPLVRVQVLSQLLILLNYVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGAIEITKHARRLIRSTPTHGSTYLATLDTVLDREKAWLAWKKLQRCEPKIEKPRAPPAKATRTLDEVKKALAVAGKPTLVVAQ---QQRTFYGRALPLPRPVDLDAIEAEVGREG-------GRTWETYVK-----PRMEEAEDPEACIDEEYHPRHEPVFCWRALR 649
K + ++ ++A + ++ + ++G L + G+ ALLDL + G + + +LEDV E ++ + W +E R+ L F KS+LT+L++CN+LLR+LSK+HNT CGRI+++LS + L++ SA+N +NVGN T +ED R PIDY LY FW LQ E + S + FV + VL AFE + + S + + + V K + KYLTNSRLFRLQL DP +R VL+Q LILLN++ +E RL+R TP G+ Y + +VL+RE+ W WK+ +RC P EK D +K L +P A+ +++ + + +E+E R G T + R EA DP ID+EY P + ++CWR LR
Sbjct: 48 KLIESTQNIFDIAVQRIVATFSWKLVSGSSKL---DTAGITALLDLCI---DGAVANILFQFAPYKVLEDVMESQPIQTCEALWDILEVRKARLTASPFFDSSGRTTKSSLTLLRMCNALLRRLSKTHNTVFCGRILVFLSFTFTLNERSAVNLHSKANVGNLTTFED-----RITFEAAEAAENTNRNESDDALSKEDCQDDGMMEPIDYKLYHIFWDLQRFFREYSLASSSVLDKQTFVEELNMVLTAFEANAFSDEDITRS------SDLNRNVSKTTVTSASKMSIDKIMHDDASTDKLQDH---------------------------------------------------------------------FFQPKYLTNSRLFRLQLRDPTLRECVLTQALILLNHL-------------------IRAKSTTSQNSTQKSEMVEAYDRVMRLLRRTPPDGAGYSEMVASVLERERNWTKWKE-ERC-PSYEK----------YADSSEKLLGSKKRPNESAAEHSVERKRVIKKKNAADTSLMDQILESEASRSSTLLERIKGEVRATNIPLPKLIERFTEAWDPANGIDKEYWPDQDEIYCWRTLR 543
BLAST of NO09G03380 vs. NCBI_GenBank
Match: CCI43861.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 121.7 bits (304), Expect = 9.600e-24 Identity = 146/613 (23.82%), Postives = 221/613 (36.05%), Query Frame = 0
Query: 56 KPVAQDTDLVEVAFRAVLVGLVRESLAGRQDLLDEEKFGMRALLDLALGLAQGGGGEGTGLRSVFFLLEDVFEFLGVEQIQTFWPEVEAREEAL-----FALFKVARKSNLTMLKLCNSLLRKLSKSHNTAICGRIMMYLSRNWELSDPSAINKGGASNVGNKTVYEDSDEFARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIDYSLYQTFWGLQEDLSEPTRVMQSDDAWREFVGKAKEVLQAFEGFTVNQDSAAASAVKGGVAAVGKKVGKAGGEEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTAYLGCKYLTNSRLFRLQLHDPLVRVQVLSQLLILLNYVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGAIEITKHARRLIRSTPTHGSTYLATLDTVLDREKAWLAWKKLQRCEPKIEKPRAPPAKATRTLDEVKKALAVAGKPTLVVAQ---QQRTFYGRALPLPRPVDLDAIEAEVGREG-------GRTWETYVK-----PRMEEAEDPEACIDEEYHPRHEPVFCWRALR 649
K + ++ ++A + ++ + ++G L + G+ ALLDL + G + + +LEDV E ++ + W +E R+ L F KS+LT+L++CN+LLR+LSK+HNT CGRI+++LS + L++ SA+N +NVGN T +ED R PIDY LY FW LQ E + S + FV + VL AFE + + S + + + V K + KYLTNSRLFRLQL DP +R VL+Q LILLN++ +E RL+R TP G+ Y + +VL+RE+ W WK+ +RC P EK D +K L +P A+ +++ + + +E+E R G T + R EA DP ID+EY P + ++CWR LR
Sbjct: 16 KLIESTQNIFDIAVQRIVATFSWKLVSGSSKL---DTAGITALLDLCI---DGAVANILFQFAPYKVLEDVMESQPIQTCEALWDILEVRKARLTASPFFDSSGRTTKSSLTLLRMCNALLRRLSKTHNTVFCGRILVFLSFTFTLNERSAVNLHSKANVGNLTTFED-----RITFEAAEAAENTNRNESDDALSKEDCQDDGMMEPIDYKLYHIFWDLQRFFREYSLASSSVLDKQTFVEELNMVLTAFEANAFSDEDITRS------SDLNRNVSKTTVTSASKMSIDKIMHDDASTDKLQDH---------------------------------------------------------------------FFQPKYLTNSRLFRLQLRDPTLRECVLTQALILLNHL-------------------IRAKSTTSQNSTQKSEMVEAYDRVMRLLRRTPPDGAGYSEMVASVLERERNWTKWKE-ERC-PSYEK----------YADSSEKLLGSKKRPNESAAEHSVERKRVIKKKNAADTSLMDQILESEASRSSTLLERIKGEVRATNIPLPKLIERFTEAWDPANGIDKEYWPDQDEIYCWRTLR 511
BLAST of NO09G03380 vs. NCBI_GenBank
Match: CCI43860.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 121.3 bits (303), Expect = 1.300e-23 Identity = 146/613 (23.82%), Postives = 221/613 (36.05%), Query Frame = 0
Query: 56 KPVAQDTDLVEVAFRAVLVGLVRESLAGRQDLLDEEKFGMRALLDLALGLAQGGGGEGTGLRSVFFLLEDVFEFLGVEQIQTFWPEVEAREEAL-----FALFKVARKSNLTMLKLCNSLLRKLSKSHNTAICGRIMMYLSRNWELSDPSAINKGGASNVGNKTVYEDSDEFARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIDYSLYQTFWGLQEDLSEPTRVMQSDDAWREFVGKAKEVLQAFEGFTVNQDSAAASAVKGGVAAVGKKVGKAGGEEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTAYLGCKYLTNSRLFRLQLHDPLVRVQVLSQLLILLNYVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGAIEITKHARRLIRSTPTHGSTYLATLDTVLDREKAWLAWKKLQRCEPKIEKPRAPPAKATRTLDEVKKALAVAGKPTLVVAQ---QQRTFYGRALPLPRPVDLDAIEAEVGREG-------GRTWETYVK-----PRMEEAEDPEACIDEEYHPRHEPVFCWRALR 649
K + ++ ++A + ++ + ++G L + G+ ALLDL + G + + +LEDV E ++ + W +E R+ L F KS+LT+L++CN+LLR+LSK+HNT CGRI+++LS + L++ SA+N +NVGN T +ED F PIDY LY FW LQ E + S + FV + VL AFE + + S + + + V K + KYLTNSRLFRLQL DP +R VL+Q LILLN++ +E RL+R TP G+ Y + +VL+RE+ W WK+ +RC P EK D +K L +P A+ +++ + + +E+E R G T + R EA DP ID+EY P + ++CWR LR
Sbjct: 16 KLIESTQNIFDIAVQRIVATFSWKLVSGSSKL---DTAGITALLDLCI---DGAVANILFQFAPYKVLEDVMESQPIQTCEALWDILEVRKARLTASPFFDSSGRTTKSSLTLLRMCNALLRRLSKTHNTVFCGRILVFLSFTFTLNERSAVNLHSKANVGNLTTFEDRITF---------EAAEAAENTNRNESDDALSKDDGMMEPIDYKLYHIFWDLQRFFREYSLASSSVLDKQTFVEELNMVLTAFEANAFSDEDITRS------SDLNRNVSKTTVTSASKMSIDKIMHDDASTDKLQDH---------------------------------------------------------------------FFQPKYLTNSRLFRLQLRDPTLRECVLTQALILLNHL-------------------IRAKSTTSQNSTQKSEMVEAYDRVMRLLRRTPPDGAGYSEMVASVLERERNWTKWKE-ERC-PSYEK----------YADSSEKLLGSKKRPNESAAEHSVERKRVIKKKNAADTSLMDQILESEASRSSTLLERIKGEVRATNIPLPKLIERFTEAWDPANGIDKEYWPDQDEIYCWRTLR 507 The following BLAST results are available for this feature:
BLAST of NO09G03380 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO09G03380 ID=NO09G03380|Name=NO09G03380|organism=Nannochloropsis oceanica|type=gene|length=2247bpback to top protein sequence of NO09G03380.1 >NO09G03380.1-protein ID=NO09G03380.1-protein|Name=NO09G03380.1|organism=Nannochloropsis oceanica|type=polypeptide|length=749bpback to top Synonyms
Publications
|