NO09G03270, NO09G03270 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO09G03270 vs. NCBI_GenBank
Match: CEM28914.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 127.9 bits (320), Expect = 4.800e-26 Identity = 79/236 (33.47%), Postives = 136/236 (57.63%), Query Frame = 0 Query: 10 VRLAKKHYITSSLWVAGLIVLTFFQGFAVPDDSLKQYEHVIKGIDLNKLYALQNDAWA----AEEMYRQSKGWF-SCDDACQSYKRAWQSAQAKLHNLEKEQEKKQREANKHLGVFSTYGVDEAKQLFWRSFKWGKSFGQRQTMFDMLFMGFRAMRRDEGLLEYTLQILIHFLLNMALGLFMALTGFTLSLWSFIRSYSPDFLTGLLFFAGAFVSAAAMVATYLTLLYGTAGATVF 241 V K++Y+ +SLW+ GL+V F+GF V + L +YE ++ + + A++ DA+A AE YR ++GWF SCD +CQ K + +A A L+ +++ +G++S GV +A++ FW S G + TM D LF+ F + DE + + +++ I +L+N+ +G+F A F +++ +R+Y P FL+G LFFA A V+AAA + T++ + G +GA + Sbjct: 98 VAWVKRNYVLTSLWLLGLLVGVCFKGFRVNEVQLMEYEQSVQNAAIIEDTAMR-DAYAILRTAESEYRNARGWFWSCDPSCQRLKAEYHTALAGLNAARGKRDAALSAGRAKVGLWSKMGVADARRTFWSSVDSGNRAALQWTMMDALFLTFTS--SDESTVVWLIKLAIRYLINLTVGMFTAFVHFLFAVYRLVRAYQPSFLSGALFFAMAGVAAAACLTTFILGVVGGSGACAY 330
BLAST of NO09G03270 vs. NCBI_GenBank
Match: XP_002764668.1 (hypothetical protein Pmar_PMAR029108 [Perkinsus marinus ATCC 50983] >EEQ97385.1 hypothetical protein Pmar_PMAR029108 [Perkinsus marinus ATCC 50983]) HSP 1 Score: 120.2 bits (300), Expect = 1.000e-23 Identity = 78/274 (28.47%), Postives = 137/274 (50.00%), Query Frame = 0 Query: 3 TSTHQGAVRLAKKHYITSSLWVAGLIVLTFFQGFAVPDDSLKQYEHVIKGIDL---NKLYALQNDAWAAEEMYRQSKGWFSCDDACQSYKRAWQSAQAKLHNLEKEQEKKQREANKHLGVFSTYGVDEAKQLFWRSFKWGKSFGQRQTMFDMLFMGFRAMRRDEGLLEYTLQILIHFLLNMALGLFMALTGFTLSLWSFIRSYSPDFLTGLLFFAGAFVSAAAMVATYLTLLYGTAGATVFVGVKALLNNANRLEQEGR------GPRRNLHYE 268 T ++ KKHY+ SS+++ GL+V F GF V + +Y ++ ID+ + ++ A+ Y SKGWFSC+D CQ+ + Q + + +E + Q +A K +G++S+Y + ++ FW S+ GK T++D LF+ RDE L+ LQ ++ +++N+ +GL A+ F ++ I SY P + G+ +F +AAA+V ++L +YG + + +K L+ Q+ R R HYE Sbjct: 23 TVAANAGLKFVKKHYVISSMYIIGLLVALFGTGFHVDPITAARYGQTLEHIDVVQGRQYRSVMQKLDRADREYYNSKGWFSCNDECQANYQKVQDLRDQKAVVESKIYDLQLDAKKTVGLWSSYAAQDMRKDFWNSWNAGKDMASHWTLWDALFIVAGGDSRDETLVSMILQTVLQYIMNLTVGLIAAIGAFVTTVPVAIASYGPGLIEGVAYFLLVLCAAAAVVVSFLGTIYGGIAGSGYYLIKKALDRVEADPQQQRYREVRYDERYRPHYE 296
BLAST of NO09G03270 vs. NCBI_GenBank
Match: CBJ28623.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 108.6 bits (270), Expect = 3.000e-20 Identity = 66/206 (32.04%), Postives = 105/206 (50.97%), Query Frame = 0 Query: 9 AVRLAKKHYITSSLWVAGLIVLTFFQGFAVPDDSLKQYEHVIKGIDLNKLYALQNDAWAAEEMYRQSKGWF-SCDDACQSYKRAWQSAQAKLHNLEKEQEKKQREANKHLGVFSTYGVDEAKQLFWRSFKWGKSFGQRQTMFDMLFMGFRAM-RRDEGLLEYTLQILIHFLLNMALGLFMALTGFTLSLWSFIRSYSPDFLTGLLF 213 A +L K+H + S WV GL+V T G+ +++ YE+ + G+D + Q + +++YR+SKG F +C++ C + ++ ++ + +L K K + +A LG+FS GV+E + LFWR GK F +R TM+D +F+G M RRDEGL +I W+ I SY PD L+ L F Sbjct: 29 AKQLVKRHPVISVSWVVGLLVSTLASGYTPSTTAMQNYENKMIGLDDESVMRAQGEMVYWDDIYRRSKGMFWTCNEQCTANRKEFERRRKTYLDLNKAYLKGEADAKSELGIFSEDGVEETRDLFWRKVSGGKQFAKRATMWDAMFVGIGTMTRRDEGLASIVARIAFRXXXXXXXXXXXXXXXXXXXXWTVIWSYQPDPLSTLAF 234
BLAST of NO09G03270 vs. NCBI_GenBank
Match: XP_002771214.1 (hypothetical protein Pmar_PMAR026784 [Perkinsus marinus ATCC 50983] >EER03030.1 hypothetical protein Pmar_PMAR026784, partial [Perkinsus marinus ATCC 50983]) HSP 1 Score: 105.5 bits (262), Expect = 2.600e-19 Identity = 62/208 (29.81%), Postives = 109/208 (52.40%), Query Frame = 0 Query: 3 TSTHQGAVRLAKKHYITSSLWVAGLIVLTFFQGFAVPDDSLKQYEHVIKGIDL---NKLYALQNDAWAAEEMYRQSKGWFSCDDACQSYKRAWQSAQAKLHNLEKEQEKKQREANKHLGVFSTYGVDEAKQLFWRSFKWGKSFGQRQTMFDMLFMGFRAMRRDEGLLEYTLQILIHFLLNMALGLFMALTGFTLSLWSFIRSYSPDFL 208 T ++ KKHY+ SS+++ GL+V F GF V + +Y+ ++ ID+ + ++ AE Y SKGWFSC+D CQ+ + Q + + +E + Q +A K +G++S+Y + ++ FW S+ GK T++D LF+ RDE L+ LQ ++ +++N+ +GL A+ F ++ I SY P + Sbjct: 31 TVAANAGLKFVKKHYVISSMYIIGLLVALFGTGFHVDPITAARYDQTLEHIDVVQGRQYRSVMQKLDRAERDYYNSKGWFSCNDECQANYQKVQDLRDQKAVVESKIYDLQLDAKKTVGLWSSYAAQDMRKDFWNSWNAGKDTASHWTLWDALFIVAGGDSRDETLVSMILQTVLQYIMNLTVGLIAAIGAFVTTVPVAIASYGPGLI 238
BLAST of NO09G03270 vs. NCBI_GenBank
Match: XP_005846278.1 (hypothetical protein CHLNCDRAFT_135614 [Chlorella variabilis] >EFN54176.1 hypothetical protein CHLNCDRAFT_135614 [Chlorella variabilis]) HSP 1 Score: 99.0 bits (245), Expect = 2.400e-17 Identity = 79/253 (31.23%), Postives = 123/253 (48.62%), Query Frame = 0 Query: 22 LWVAGLIVLTFFQGFAVPDDSLKQYEHVIKGID--LNKLYALQNDAWAAEEMYRQSKGWF-----SCDDACQSYKRAWQSAQAKLHNLEKEQEKKQREANKHLGVFSTYGVDEAKQLFWRSFKWGKSFGQRQTMFDMLFMGFRAMRRDEGLLEYTLQILIHFLLNMALGLFMALTGFTLSLWSFIRSYSPDFLTGLLFFAGAFVSAAAMVATYLTLLYGTAGATVFVGVKALLNNANRLEQEGRGPRRNLHYE 268 +W+ GL + A+ D+ ++ ++ + L +L + AE +Q K WF ++ + A +A+A ++ ++K REA LG++S GV+E ++LFW SF GK F QRQT D +F + RD + LQ+L L+N GL ++ F L L S I SY + + FFA A V+A ++VA YL LL+G G + V ++ A RLE RR L Y+ Sbjct: 36 VWLLGLYCAFLARPPAITDEQTTAFKVKVQEAEVILGELARAEQVLMEAELEQQQFKVWFWRFKPEARTEVEARQPAVDAARAVAREIQGRRDKVLREAKAVLGLWSEAGVEEGRELFWESFNSGKVFAQRQTFIDSIFTILDS--RDRDWISMLLQLLFQTLINFFTGLCASVFIFLLQLPSLIWSYQASVWSAVSFFALAGVAAVSVVAAYLGLLFGAGGVVAYSTVHLVVQQAARLEAGREQQRRRLDYD 286
BLAST of NO09G03270 vs. NCBI_GenBank
Match: XP_014160642.1 (hypothetical protein SARC_01119 [Sphaeroforma arctica JP610] >KNC86740.1 hypothetical protein SARC_01119 [Sphaeroforma arctica JP610]) HSP 1 Score: 95.5 bits (236), Expect = 2.600e-16 Identity = 67/212 (31.60%), Postives = 108/212 (50.94%), Query Frame = 0 Query: 50 IKGIDLNKLYALQNDAWAAEEMYRQSKGW-FSCDDACQSYKRAWQSAQAKLHNLEKEQEKKQREANKHLGVFSTYGVDEAKQLFWRSFKWGKSFGQRQTMFDMLFMGFRAMRRDEGLLEYTLQILIHFLLNMALGLFMALTGFTLSLWSFIRSYSPDFLTGLLFFAGAFVSAAAMV-ATYLTLLYGTAGATVFVGVKALLNNANRLEQEGRG 260 + + +++ Q++ W AE YRQS+G+ +SC C K + A + + E E + +A + +G+FS+YGV+E + +FW F G+ F +RQTM+D +FMG AM RDE + Y L++++ I SY GL FF A ++ +MV AT L+ GTAG+ + V + AN++E + RG Sbjct: 49 LDNLPVDEFQTAQDNLWRAEHEYRQSQGFLWSCSGPCPELKEEYHLALQEFNQAEAEYNQGISDAKREVGLFSSYGVEETRNMFWGKFSSGQRFAKRQTMWDAMFMGIGAMTRDETMGSYILRVVMXXXXXXXXXXXXXXXXXXXXXXGLITSYQASTWQGLFFFVLAGLAGWSMVSATIGGLVMGTAGS---LYVMQKIAAANQIEGQRRG 257
BLAST of NO09G03270 vs. NCBI_GenBank
Match: PSC71398.1 (ATP-dependent helicase deoxyribonuclease subunit B [Micractinium conductrix]) HSP 1 Score: 94.4 bits (233), Expect = 5.900e-16 Identity = 78/254 (30.71%), Postives = 123/254 (48.43%), Query Frame = 0 Query: 18 ITSSLWVAGLIVLTFFQGFAVPDDSLKQYEHVIKGID--LNKLYALQNDAWAAEEMYRQSKGWF-----SCDDACQSYKRAWQSAQAKLHNLEKEQEKKQREANKHLGVFSTYGVDEAKQLFWRSFKWGKSFGQRQTMFDMLFMGFRAMRRDEGLLEYTLQILIHFLLNMALGLFMALTGFTLSLWSFIRSYSPDFLTGLLFFAGAFVSAAAMVATYLTLLYGTAGATVFVGVKALLNNANRLEQEGRGPRRNL 265 +T +LWV GL + + + D L + +K + + L ++ AE Q K WF A +++ A +AQ ++ L +++ REA LG++S GV+EA++ FW S+ GK F QRQT +D F+ + RD L L +L LLN G+ +++ F SL S I SY +G+ FF A V+A +++A+YL LL+G + + + RLE G PR L Sbjct: 263 LTLALWVLGLFLAFAAKPSKISDMQLAAFNAKLKQAEAVVPDLSYVEVQLVDAEVEQAQHKVWFWRFKADARAAVAAHQPAVDAAQERVQRLRDRRDQLLREAKAELGLWSEAGVEEAREQFWESYASGKLFAQRQTFWDAFFVIIGSRERD--WLAMLLNLLFRTLLNFFTGMCVSVFVFLFSLPSLIWSYQAPLWSGVAFFCLAAVAAVSVIASYLGLLFGAGATATYAALSMAAAHQQRLE-GGYAPRPRL 513
BLAST of NO09G03270 vs. NCBI_GenBank
Match: XP_009517549.1 (hypothetical protein PHYSODRAFT_469409 [Phytophthora sojae] >EGZ30274.1 hypothetical protein PHYSODRAFT_469409 [Phytophthora sojae]) HSP 1 Score: 92.8 bits (229), Expect = 1.700e-15 Identity = 74/254 (29.13%), Postives = 126/254 (49.61%), Query Frame = 0 Query: 22 LWVAGLIVLTFFQGFAVPDDSLK-QYEH-VIKGIDLNKLYALQNDAWAAEEMYRQSKGWF--------SCDDACQSYKRAWQSAQAKLHNLEKEQEKKQREANKHLGVFSTYGVDEAKQLFWRSFKWGKSFGQRQTMFDMLFMGFRAMRRDEGLLEYTLQILIHFLLNMALGLFMALTGFTLSLWSFIRSYSPDFLTGLLFFAGAFVSAAAMVATYLTLLYGTAGATVFVGVKALLNNA---NRLEQEGRGPRR 263 LW GL + G + +K YEH V++ ++ + + A+ ++K WF + D Q W A++ E+E+E K ++A ++G++S +G+ + + FW +F+ GK F Q+QT + M+ A RDE +L L + ++N GL AL F SL + + SY PD L+ F F+ AA++VA+YL +YG + V+V K ++ +A R +Q+ RG R+ Sbjct: 54 LWAVGLFFMLLAPGLSQVTPEMKTTYEHMVVEAANMPEYHEAYAKYTEAQAYADEAKVWFWRFREPYKTLVDQRQPAADKW---AAEVARTEREREDKMKKARAYVGLWSDFGLADVRARFWSAFERGKLFAQQQTFYHMIMRVLSA--RDEDILSTVLNWVFVAVMNFTTGLLGALFYFFFSLVNMVFSYQPDPLSATAFVVLGFIGAASVVASYLFAIYGMVASGVYVVGKVVVRDALEQERRQQQLRGERQ 302
BLAST of NO09G03270 vs. NCBI_GenBank
Match: OWZ23385.1 (hypothetical protein PHMEG_0001755 [Phytophthora megakarya]) HSP 1 Score: 91.7 bits (226), Expect = 3.800e-15 Identity = 73/254 (28.74%), Postives = 126/254 (49.61%), Query Frame = 0 Query: 22 LWVAGLIVLTFFQG-FAVPDDSLKQYE-HVIKGIDLNKLYALQNDAWAAEEMYRQSKGWF--------SCDDACQSYKRAWQSAQAKLHNLEKEQEKKQREANKHLGVFSTYGVDEAKQLFWRSFKWGKSFGQRQTMFDMLFMGFRAMRRDEGLLEYTLQILIHFLLNMALGLFMALTGFTLSLWSFIRSYSPDFLTGLLFFAGAFVSAAAMVATYLTLLYGTAGATVFVGVKALLNNA---NRLEQEGRGPRR 263 LW+ GL + G + V + YE V++ ++ + + A+ +K WF + D Q W A++ E+E+E K ++A ++G++S +G+ + + FW +F+ GK F Q+QT + M+ A RDE +L L + ++N GL AL F SL + + SY PD L+ + F F+ AA++VA+YL +YG + V+V K ++ +A R +Q+ RG R+ Sbjct: 54 LWIVGLFFMLLAPGLYTVTPEMNSTYEGMVVEAANMPEYHEAYAKYMEAQAHADNAKVWFWRFREPYKTLVDQRQPIADKW---AAEVARTEREREDKMKKARAYVGLWSDFGLADVRARFWSAFEKGKMFAQQQTFYHMIMRVLSA--RDEDVLSMVLNWVFVAVMNFTTGLLGALFYFFFSLVNMVFSYQPDPLSAMAFVVLGFIGAASVVASYLFAIYGMVASGVYVVGKVVVRDALEQERRQQQLRGERQ 302
BLAST of NO09G03270 vs. NCBI_GenBank
Match: ETK72304.1 (hypothetical protein L915_20548 [Phytophthora parasitica]) HSP 1 Score: 90.9 bits (224), Expect = 6.500e-15 Identity = 72/254 (28.35%), Postives = 124/254 (48.82%), Query Frame = 0 Query: 22 LWVAGLIVLTFFQGFAVPDDSLKQ-YE-HVIKGIDLNKLYALQNDAWAAEEMYRQSKGWF--------SCDDACQSYKRAWQSAQAKLHNLEKEQEKKQREANKHLGVFSTYGVDEAKQLFWRSFKWGKSFGQRQTMFDMLFMGFRAMRRDEGLLEYTLQILIHFLLNMALGLFMALTGFTLSLWSFIRSYSPDFLTGLLFFAGAFVSAAAMVATYLTLLYGTAGATVFVGVKALLNNA---NRLEQEGRGPRR 263 LW GL + G +K YE V++ ++ + + A+ ++K WF + D Q W + A+ E+E+E K ++A ++G++S +G+ + + FW +F+ GK F Q+QT + M+ A RDE +L L + ++N GL AL F SL + + SY PD L+ F F+ AA++VA+YL +YG + ++V K ++ +A R +Q+ RG R+ Sbjct: 53 LWAVGLFFMLLSPGLRTVTPEMKSTYEGMVLEAANMPEYHEAYAKYMEAQSYADEAKVWFWRFREPYKTMVDQRQPVADKWAAEMAR---TEREREDKMKKARSYVGLWSDFGLADLRSRFWNAFEKGKIFAQQQTFYHMIMRVLSA--RDEDVLSMVLNWVFVAVMNFTTGLLGALFYFFFSLVNMVFSYQPDPLSATAFVVLGFIGAASVVASYLFAIYGMVASGIYVVGKVVVRDALEQERRQQQLRGERQ 301 The following BLAST results are available for this feature:
BLAST of NO09G03270 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO09G03270 ID=NO09G03270|Name=NO09G03270|organism=Nannochloropsis oceanica|type=gene|length=3042bpback to top protein sequence of NO09G03270.1 >NO09G03270.1-protein ID=NO09G03270.1-protein|Name=NO09G03270.1|organism=Nannochloropsis oceanica|type=polypeptide|length=284bpback to top protein sequence of NO09G03270.2 >NO09G03270.2-protein ID=NO09G03270.2-protein|Name=NO09G03270.2|organism=Nannochloropsis oceanica|type=polypeptide|length=268bpback to top Synonyms
Publications
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