NO09G03260, NO09G03260 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO09G03260 vs. NCBI_GenBank
Match: EWM27474.1 (smad nuclear interacting protein 1 [Nannochloropsis gaditana]) HSP 1 Score: 184.5 bits (467), Expect = 3.000e-43 Identity = 105/196 (53.57%), Postives = 115/196 (58.67%), Query Frame = 0 Query: 18 VPFGEKPKDQEARYEWGKPAHTDDQEGGXXXXXXXXXXXXPKAPQLVAKPNFGLTGALATDSQTGNVYKGVVLKWTEPDDARKPEKGWRL----------------------------TPELFEAACGA--SVQXXXXXXXXXXXKPYLMDLESVNKTRLNGEEIPPARYVELRPQDMIQFGLSSREYVLMHEDMV 184 VP GE + QE RYEWGKPA G KAP LVAKPNFGLTGALA D+QTGNVYKGVVLKW+EPDDAR P +GWRL ++ +C +V KPYLMDLESVNKTRLNGEE+PPARYVELR QD IQFGLSSREYVLMHE +V Sbjct: 185 VPGGEPSRGQEERYEWGKPA-ISPLNGDASSRGEDGGKGEEKAPTLVAKPNFGLTGALAQDAQTGNVYKGVVLKWSEPDDARLPSRGWRLYVFKQGELKDTLHLHRQSAYLVGRHGVADLKVEHPSCSKQHAVLQFRQKHEGAEVKPYLMDLESVNKTRLNGEEVPPARYVELRAQDTIQFGLSSREYVLMHESLV 379
BLAST of NO09G03260 vs. NCBI_GenBank
Match: CBN78580.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 111.7 bits (278), Expect = 2.500e-21 Identity = 73/199 (36.68%), Postives = 95/199 (47.74%), Query Frame = 0 Query: 21 GEKPKDQEARYEWGKPAHTDDQEGGXXXXXXXXXXXXPKAPQLVAKPNFGLTGALATDSQTGNVYKGVVLKWTEPDDARKPEKGWRLTPELFEAACG--------------------------------ASVQ-------XXXXXXXXXXXKPYLMDLESVNKTRLNGEEIPPARYVELRPQDMIQFGLSSREYVLMHE 181 G D +Y WG ++E G P APQ +A NFGL+G LA D TGNVYKGVVLKW EP++A KP K WRL +AA A VQ +PY+MDL+S N T LNGE+I ARY+E++ +D+++FG S+REYVL+H+ Sbjct: 432 GRGKDDGGQKYGWGGADARQEEEPG---------DAQPAAPQELA--NFGLSGKLAKDQATGNVYKGVVLKWQEPEEASKPTKKWRLYVFKGDAAIATLHIHRQSAYLVGREKRVADIVVDHPSCSKQHAVVQFRMFERVDEKEGTTRRSVRPYIMDLDSTNGTLLNGEQIESARYIEMKEKDVVKFGTSTREYVLLHD 619
BLAST of NO09G03260 vs. NCBI_GenBank
Match: XP_012198009.1 (hypothetical protein SPRG_04029 [Saprolegnia parasitica CBS 223.65] >KDO31414.1 hypothetical protein SPRG_04029 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 104.8 bits (260), Expect = 3.100e-19 Identity = 68/192 (35.42%), Postives = 88/192 (45.83%), Query Frame = 0 Query: 30 RYEWGKPAHTDDQEGGXXXXXXXXXXXXPKAPQLVAKPNFGLTGALATDSQTGNVYKGVVLKWTEPDDARKPEKGWRL----------TPELF-EAAC--------------------------------GASVQXXXXXXXXXXXKPYLMDLESVNKTRLNGEEIPPARYVELRPQDMIQFGLSSREYVLM 179 ++ WG+P D + P +V KPNFGL+GALA DS TGN GVV+KW EP +AR P+K WRL T L ++AC KPY+MDL+S N T LNG++I +RY+ELR +D++ FG SSREYVLM Sbjct: 52 KFAWGQPEEPKDPN---------------EEPVVVQKPNFGLSGALAKDSATGNTRNGVVMKWCEPPEARVPDKRWRLYVFKKDENIATLHLHRQSACLFGRDKKVADVFMEHESISKQHAVLQFRLRVTEHRASELDQPELIQTIKPYIMDLKSTNHTFLNGKKIDHSRYIELRERDVLTFGESSREYVLM 228
BLAST of NO09G03260 vs. NCBI_GenBank
Match: OQS06063.1 (Smad nuclear interacting protein-like [Thraustotheca clavata]) HSP 1 Score: 104.8 bits (260), Expect = 3.100e-19 Identity = 70/194 (36.08%), Postives = 93/194 (47.94%), Query Frame = 0 Query: 28 EARYEWGKPAHTDDQEGGXXXXXXXXXXXXPKAPQLVAKPNFGLTGALATDSQTGNVYKGVVLKWTEPDDARKPEKGWRL----------TPELF-EAAC---------------------GASVQXXXXXXXXXXXK-----------PYLMDLESVNKTRLNGEEIPPARYVELRPQDMIQFGLSSREYVLM 179 E +++WG+P +++E P V KPNFGL+GALA DS TGN GVV+KW EP +AR P+K WRL T L ++AC A +Q + PY+MDL+S N T LNG +I +RY+ELR QD++ FG S+REYVLM Sbjct: 48 EEKFKWGQPEKEEEKE-----------------PVEVQKPNFGLSGALAKDSATGNTRNGVVMKWCEPPEARVPDKRWRLYVFKNGENIATLHLHRQSACLFGRDKKVADAFLEHESISKQHAVLQFRLRVKEERASELDQPEMVHEIIPYIMDLKSTNHTFLNGNKIEHSRYIELREQDVLTFGESTREYVLM 224
BLAST of NO09G03260 vs. NCBI_GenBank
Match: GAX99335.1 (Hypothetical protein PINS_007187 [Pythium insidiosum]) HSP 1 Score: 103.6 bits (257), Expect = 6.800e-19 Identity = 65/189 (34.39%), Postives = 88/189 (46.56%), Query Frame = 0 Query: 29 ARYEWGKPAHTDDQEGGXXXXXXXXXXXXPKAPQLVAKPNFGLTGALATDSQTGNVYKGVVLKWTEPDDARKPEKGWRL---------------------------TPELFEAACGASVQ------------XXXXXXXXXXXKPYLMDLESVNKTRLNGEEIPPARYVELRPQDMIQFGLSSREYVLM 179 A WGK +D+ G + Q V KPNFGL+GALA D TGNV GVV+KW+EP +AR P++ +RL ++ S Q +PY+MDL S N T LNG++I ARY+ELRP+D+++FG S+REYVL+ Sbjct: 6 ASRRWGKQEENEDENG--------------EPDQPVEKPNFGLSGALAKDRATGNVQNGVVMKWSEPAEARVPKRRFRLYVFKNDEEIATLHVHRKSAFLVGRDKAVADILTEHASCSKQHAVLQYRLFQKPTPDGLSFTQEVRPYIMDLNSTNGTFLNGKQIESARYIELRPRDVLKFGESTREYVLV 180
BLAST of NO09G03260 vs. NCBI_GenBank
Match: XP_008618715.1 (hypothetical protein SDRG_14369 [Saprolegnia diclina VS20] >EQC27785.1 hypothetical protein SDRG_14369 [Saprolegnia diclina VS20]) HSP 1 Score: 103.2 bits (256), Expect = 8.900e-19 Identity = 67/192 (34.90%), Postives = 87/192 (45.31%), Query Frame = 0 Query: 30 RYEWGKPAHTDDQEGGXXXXXXXXXXXXPKAPQLVAKPNFGLTGALATDSQTGNVYKGVVLKWTEPDDARKPEKGWRL----------TPELF-EAAC--------------------------------GASVQXXXXXXXXXXXKPYLMDLESVNKTRLNGEEIPPARYVELRPQDMIQFGLSSREYVLM 179 ++ WG+P D + P +V KPNFGL+GALA DS TGN GVV+KW EP +AR P+K WR T L ++AC KPY+MDL+S N T LNG++I +RY+ELR +D++ FG SSREYVLM Sbjct: 52 KFAWGQPEEPKDPN---------------EEPVVVQKPNFGLSGALAKDSATGNTRNGVVMKWCEPPEARVPDKRWRFYVFKKDENIATLHLHRQSACLFGRDKKVADVFMEHESISKQHAVLQFRLRVTEHRASELDQPELIQTIKPYIMDLKSTNHTFLNGKKIDHSRYIELRERDVLTFGESSREYVLM 228
BLAST of NO09G03260 vs. NCBI_GenBank
Match: OQR96260.1 (hypothetical protein ACHHYP_16542 [Achlya hypogyna]) HSP 1 Score: 100.9 bits (250), Expect = 4.400e-18 Identity = 65/192 (33.85%), Postives = 88/192 (45.83%), Query Frame = 0 Query: 30 RYEWGKPAHTDDQEGGXXXXXXXXXXXXPKAPQLVAKPNFGLTGALATDSQTGNVYKGVVLKWTEPDDARKPEKGWRL----------TPELF-EAAC--------------------------------GASVQXXXXXXXXXXXKPYLMDLESVNKTRLNGEEIPPARYVELRPQDMIQFGLSSREYVLM 179 +Y WG+P + + P +V KPNFGLTGALA D+ TGN GVV+KW EP +AR P+K WRL T L ++AC +PY+MDL+S N T LNG++I +RY+EL+ +D++ FG S+REYVLM Sbjct: 52 KYSWGQPEAPKSGD---------------EVPVVVEKPNFGLTGALAKDNLTGNTKNGVVMKWCEPPEARVPDKRWRLYVFKKDENIETLHLHRQSACLFGRDKKVADVYMQHESISKQHAVLQFRLRVTEHRASELDQLEQVQSIRPYIMDLKSTNHTFLNGKKIEHSRYIELKEKDVLTFGESTREYVLM 228
BLAST of NO09G03260 vs. NCBI_GenBank
Match: CCI45133.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 100.5 bits (249), Expect = 5.800e-18 Identity = 59/153 (38.56%), Postives = 81/153 (52.94%), Query Frame = 0 Query: 64 VAKPNFGLTGALATDSQTGNVYKGVVLKWTEPDDARKPEKGWRL----------TPELF-------------------EAACG---ASVQ------XXXXXXXXXXXKPYLMDLESVNKTRLNGEEIPPARYVELRPQDMIQFGLSSREYVLM 179 + KPNFGL+GALA D TGN GVV+KW+EP +ARKP+ WRL T ++ A+C A +Q +PY++DL+S N T LNGE I +RY+ELR +D+++FG S+REYVL+ Sbjct: 130 IEKPNFGLSGALAKDRVTGNAVNGVVMKWSEPTNARKPQCRWRLYVFKGETSIATLHIYSKSAFLVGRDKTIADVLTEHASCSKQHAVIQFRLFEKEIESETSISEVRPYILDLQSTNGTFLNGERIESSRYIELREKDLLRFGESTREYVLL 282
BLAST of NO09G03260 vs. NCBI_GenBank
Match: KRY59701.1 (Smad nuclear-interacting protein 1, partial [Trichinella britovi]) HSP 1 Score: 99.0 bits (245), Expect = 1.700e-17 Identity = 65/165 (39.39%), Postives = 84/165 (50.91%), Query Frame = 0 Query: 25 KDQEARYEWGKPAHTDDQEGGXXXXXXXXXXXXPKAPQLVAKPNFGLTGALATDSQTGNVYKGVVLKWTEPDDARKPEKGWRLTPELFEAA---------CGASVQXXXXXXXXXXXKPYLMDLESVNKTRLNGEEIPPARYVELRPQDMIQFGLSSREYVLMHE 181 + E +Y WGK + G PK KPNF +TGALA D+ N YKGVV+K+TEP +ARKP+ W L P E A + KPYL+DL S N T LNG+++ RY EL +D+I+FG SSREYVL++E Sbjct: 152 RKNEQKYAWGKREVKVETNSG----------APPK-----EKPNFEVTGALAADT---NSYKGVVIKYTEPPEARKPKLRWSLYPFKGEEALPLYRIHRQSAYLFETTDDGRVIHLIKPYLIDLGSANGTYLNGDKMEAQRYYELFEKDVIKFGYSSREYVLLNE 298
BLAST of NO09G03260 vs. NCBI_GenBank
Match: XP_009036455.1 (hypothetical protein AURANDRAFT_6160, partial [Aureococcus anophagefferens] >EGB08690.1 hypothetical protein AURANDRAFT_6160, partial [Aureococcus anophagefferens]) HSP 1 Score: 97.8 bits (242), Expect = 3.700e-17 Identity = 61/146 (41.78%), Postives = 74/146 (50.68%), Query Frame = 0 Query: 72 TGALATDSQTGNVYKGVVLKWTEPDDARKPEKGWR---------------------LTPELFEAA--------CG---ASVQXXXXXXXXXXXK-------PYLMDLESVNKTRLNGEEIPPARYVELRPQDMIQFGLSSREYVLM 179 +GALA D TGN+Y+G VLKW+EPDDAR+P WR L + E A C A +Q PY++DLES N T LNGE I PARYVELR +DM+QFG S+REYVL+ Sbjct: 1 SGALAKDETTGNIYRGHVLKWSEPDDARQPTSRWRVYEFKNGQEEKVMHIHRQSAYLVGRVKEIADILTMHPSCSGQHAVIQFRLKVSVDPTTNVESRAVLPYVLDLESTNGTTLNGERIAPARYVELREKDMLQFGHSTREYVLI 146 The following BLAST results are available for this feature:
BLAST of NO09G03260 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO09G03260 ID=NO09G03260|Name=NO09G03260|organism=Nannochloropsis oceanica|type=gene|length=837bpback to top protein sequence of NO09G03260.1 >NO09G03260.1-protein ID=NO09G03260.1-protein|Name=NO09G03260.1|organism=Nannochloropsis oceanica|type=polypeptide|length=188bpback to top Synonyms
Publications
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