NO09G03190, NO09G03190 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO09G03190 vs. NCBI_GenBank
Match: EWM27482.1 (Rab-GTPase-TBC domain protein [Nannochloropsis gaditana]) HSP 1 Score: 269.2 bits (687), Expect = 4.600e-68 Identity = 137/239 (57.32%), Postives = 159/239 (66.53%), Query Frame = 0 Query: 1 MEAFLTALGDPSIQWDDTQLRTLRSLAMQRAGLPAHARGLAWRFFLNVLPPTREGGASIARDKAGEWPARLQAARGQYAVWKGQLYPDFNRVSKEGDDDPLSALTM----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAWKRYYEGMELLDEIKRDLTRLYPSGVDEAHFMEGKTQEVLLAVLCVWSTLHKATSYRQGMHEVLSVLFFALQEEHACSRGGGRE 230 M+ FL L D S WD+ QL L+SLA++R+GLP+HARGLAWRFFL+VLPPTREGGAS+ARDK GEWP RLQAAR QYA WK QLYPDF RVSKEGDDDPLSALT GGAW+RYY G+ELL+E++RDL+RLYP GVDEAHF K QE+LLAVL VW++LH+ATSYRQGMHEV +VL + L+ E GGRE Sbjct: 38 MDDFLGKLADTSTAWDEQQLHVLKSLALERSGLPSHARGLAWRFFLHVLPPTREGGASLARDKLGEWPVRLQAARQQYADWKQQLYPDFTRVSKEGDDDPLSALTAAPKEELTREEVEEGKDGEETTKEGSKDKEGPLRREGSKARKPGAGEGGAWRRYYAGLELLEEVRRDLSRLYPLGVDEAHFTRPKAQEMLLAVLFVWASLHQATSYRQGMHEVAAVLLYVLEAEGGGE--GGRE 274
BLAST of NO09G03190 vs. NCBI_GenBank
Match: GBG33619.1 (TBC1 domain family member 5 [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 152.1 bits (383), Expect = 8.100e-33 Identity = 130/391 (33.25%), Postives = 183/391 (46.80%), Query Frame = 0 Query: 7 ALGDPSIQW----DDTQLRTLRSLAMQRAGLPAHARGLAWRFFLNVLPPTREGGASIARDKAGEWPARLQAARGQYAVWKGQLYPDFNRVSKEGDDDPLSALTMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAWKRYYEGMELLDEIKRDLTRLYPSGVDEAHFMEGKTQEVLLAVLCVWSTLHKATSYRQGMHEVLSVLFFALQEEHACSRGGGREALPP-----------SLAYITDPQYLEHDAFLLFDRLMVELEPLYYV--------------------------------ERPRAYSSTSSSFPSSSPRDESPVVRLSHRLQGPVLQQADPEVWTSLNTVHEVAPQLYGIKWTRLLFAREFAMRDVLQLWDCMFA 351 A GD + W DD L SL Q G AR LAWR LP A+ R A WP R +Y + L D + + +GD DPL XXXXXXXXXXXXXXXX W+ +++ ELL+EI++DL RLYP+G D+ FME +VL VL WS LH TSYRQGMHE+ + L + L + A + R + PP +L ++ D YLEHD F LF+R+M +++P++ V + RA S + ++P P++ ++ +Q +L + D + L+ + + PQ+Y ++W RLLF REF + V+ LWD MFA Sbjct: 16 AKGDDACAWEALADDMVAGNLASL--QGLG----ARSLAWRAACGTLPV-----AASPRAIAATWPNVAADLRREYEALRESLVVDPDEAADDGDFDPLG-----------------XXXXXXXXXXXXXXXXSGAKTGVSNPWEEFHKDKELLEEIRQDLERLYPTGCDD-FFMEPTVSKVLQGVLFTWSKLHPDTSYRQGMHELAAPLLYCLHAD-ATAANRARTSQPPALDEAAVLIGEALKHVFDATYLEHDLFWLFERVMRDMKPMFAVTSSARSQDDIRKAREAMKQASKRNRALGSGMGQESRASSYLEGNSDDATPPTLPPILLVAEEIQNVILSKVDGALQQHLSKL-TIEPQVYALRWIRLLFGREFPIDQVMVLWDAMFA 375
BLAST of NO09G03190 vs. NCBI_GenBank
Match: PVD37311.1 (hypothetical protein C0Q70_04310 [Pomacea canaliculata]) HSP 1 Score: 150.6 bits (379), Expect = 2.400e-32 Identity = 116/412 (28.16%), Postives = 180/412 (43.69%), Query Frame = 0 Query: 12 SIQWD-----DTQLRTLRSLAMQRAGLPAHARGLAWRFFLNVLPPTREGGASIARDKAGEWPARLQAARGQYAVWKGQLYPDFNRVSKEGDDDPLSALTMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAWKRYYEGMELLDEIKRDLTRLYPSGVDEAHFMEGKTQEVLLAVLCVWSTLHKATSYRQGMHEVLSVLFFALQEEH-ACSRGGGREALPPSLAYITDPQYLEHDAFLLFDRLMVELEPLYYVE----RPRAYSSTSSSFPSSSPRD---ESPVVRLSHRLQGPVLQQADPEVWTSLNTVHEVAPQLYGIKWTRLLFAREFAMRDVLQLWDCMFAMMGEEXXXXXXXXXXXXXXXXXXXXXLGVVECVGVAMMVMVRSALLTDEVSVALRTLMSF 411 S++WD L+ +R A+ P R + WR FL VLP + W + + R +Y K L + GD D ++ W R+++ EL IK+D+ R +P + A F E Q+ L+ VL + LH+ SY+QGMHE+L+ + F L +H A E + P + + DPQYLEHDA+ +F ++M +EP Y + P+ + +S P + P+D S +V R+Q +L++AD E+ L + E+APQ+YGI+W RLLF REF M+D+L LWD +FA +V+ + AMM+ +R LL + + L LM + Sbjct: 88 SMEWDRLFTRPQYLKWIRHQAILGELRPCRFRSICWRLFLEVLP-----------EDMDMWSEKARQDRVKYDALKNMLI-----TNPRGDVDSVNVAV-----------------------------NNPLSQDEESPWNRFFQDNELRLTIKQDVIRTFP---ELAFFREQNMQDALINVLFYYCRLHQTLSYKQGMHELLAPIIFVLHSDHQAFLHASESETVLPIIKDMLDPQYLEHDAYFMFCQVMTTVEPWYLSKDVPSAPKKHEVFTSQ-PFARPQDLIPSSVIVTKLTRIQDYLLKKADLELHAHLEQL-EIAPQIYGIRWLRLLFGREFPMQDLLMLWDAIFA----------------------DSIGFDLVDYIFAAMMLYIRELLLASDYAGCLSALMKY 427
BLAST of NO09G03190 vs. NCBI_GenBank
Match: XP_015777527.1 (PREDICTED: TBC1 domain family member 5-like [Acropora digitifera]) HSP 1 Score: 149.8 bits (377), Expect = 4.000e-32 Identity = 115/408 (28.19%), Postives = 180/408 (44.12%), Query Frame = 0 Query: 18 TQLRTLRSLAMQRAGLPAHARGLAWRFFLNVLPPTREGGASIARDKAGEWPARLQAARGQYAVWKGQLYPDFNRVSKEGDD----DPLSALTMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAWKRYYEGMELLDEIKRDLTRLYPSGVDEAHFMEGKTQEVLLAVLCVWSTLHKATSYRQGMHEVLSVLFFALQEEHACSRGGGREALPPSLAYITDPQYLEHDAFLLFDRLMVELEPLYYVERPRAYSSTSSSF--PSSSP------RDESPVVRLSHRLQGPVLQQADPEVWTSLNTVHEVAPQLYGIKWTRLLFAREFAMRDVLQLWDCMFAMMGEEXXXXXXXXXXXXXXXXXXXXXLGVVECVGVAMMVMVRSALLTDEVSVALRTLMSFEGG 414 T T+R + R + W+ FL LP +E EW +R R +YA +K + D N+ KE D +PLS WK+Y+ EL IK+DL RL+P + F + K +E++L +L + ++A SY+QGMHE+L+ + + L E+ + +L + + D +LEHDAF LF +LM + E +Y++ P A S + F P + P + +V+ R+Q +L++ DPE+W L + ++ PQ+YG++W RLLF REF M DVL LWD +FA L +V+ + ++M+ +R LL S + LM F GG Sbjct: 33 TYYATIRQYGLDGKLRSTKFRSICWKVFLECLPERKE-----------EWVSRTTKLRNEYAQFKSKCLFDPNKGKKEESDLTVFNPLS-------------------------------------QDETSPWKQYFIDNELKSTIKQDLDRLFP---EIEFFQQSKVKEMMLNILFCHAKKNEALSYKQGMHELLAPIVYVLHEDARSFQHLEGSSLKVA-KVLMDSNFLEHDAFALFVQLMDQTE-TWYLQLPVADRSERNKFLDPHAEPFADQELMPSTAIVKKLSRIQEHMLRKYDPELWVHLKNL-DITPQVYGLRWIRLLFGREFPMDDVLVLWDALFA----------------------DGPMLNLVDYIYISMLEAIRDRLLRGSYSACMGYLMKFPGG 364
BLAST of NO09G03190 vs. NCBI_GenBank
Match: XP_013066251.1 (PREDICTED: TBC1 domain family member 5-like isoform X6 [Biomphalaria glabrata]) HSP 1 Score: 145.6 bits (366), Expect = 7.600e-31 Identity = 110/408 (26.96%), Postives = 185/408 (45.34%), Query Frame = 0 Query: 20 LRTLRSLAMQRAGLPAHARGLAWRFFLNVLPPTREGGASIARDKAGEWPARLQAARGQYAVWKGQLYPDFNRVSKEGD---DDPLSALTMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAWKRYYEGMELLDEIKRDLTRLYPSGVDEAHFMEGK-TQEVLLAVLCVWSTLHKATSYRQGMHEVLSVLFFALQEEH-ACSRGGGREALPPSLAYITDPQYLEHDAFLLFDRLMVELEPLYYVERPRAYSSTSSSF---------PSSSPRDESP---VVRLSHRLQGPVLQQADPEVWTSLNTVHEVAPQLYGIKWTRLLFAREFAMRDVLQLWDCMFAMMGEEXXXXXXXXXXXXXXXXXXXXXLGVVECVGVAMMVMVRSALLTDEVSVALRTLMSF 411 ++ L+ +M+ + R L W+ FL VLPP++E EW + + +R ++ K +L + + D ++PLS W ++++ EL IK+D+ R +P E F +G E+++ +L +S H SY+QGMHE+L+ L F L +H A E++ + + DP YLEHDA+ +F ++M +EP +Y+ R Y++ + S P S +D +P +V R+Q +L++ DPE+ L + E+APQ+YGI+W RLLF REF M+D+L LWD +F +V+ + VAM++ ++ LLT + + L LM + Sbjct: 95 MKKLKEKSMEGELRSSRFRSLIWKLFLEVLPPSKE-----------EWVEKTKQSRNKFEDLKNKLIVNPRKAVDSVDITLNNPLS-------------------------------------QDEESPWNKFFQDNELRLTIKQDVIRTFP----EVEFFQGTGMNEMMIDILFCYSREHATNSYKQGMHELLAPLIFVLHCDHQAFLHACEIESVKDIIKVVMDPNYLEHDAYTMFCQVMETVEP-WYLSRDIFYNTKTGSMRNLEMINATPFSRSQDLNPSSVIVTKLTRIQDYILKKFDPELHQHLERL-EIAPQIYGIRWLRLLFGREFPMQDLLMLWDAIFG----------------------DGIGFDLVDYIFVAMLLYIKDNLLTSDYATCLTVLMKY 426
BLAST of NO09G03190 vs. NCBI_GenBank
Match: XP_010794165.1 (PREDICTED: TBC1 domain family member 5 isoform X1 [Notothenia coriiceps]) HSP 1 Score: 140.2 bits (352), Expect = 3.200e-29 Identity = 86/275 (31.27%), Postives = 141/275 (51.27%), Query Frame = 0 Query: 143 GGAWKRYYEGMELLDEIKRDLTRLYPSGVDEAHFMEGKTQEVLLAVLCVWSTLHKATSYRQGMHEVLSVLFFALQEEHACSRGGGREALP-PSLAYITDPQYLEHDAFLLFDRLMVELEP---LYYVERPRAYSSTSSSFPSSSPRDESP---VVRLSHRLQGPVLQQADPEVWTSLNTVHEVAPQLYGIKWTRLLFAREFAMRDVLQLWDCMFAMMGEEXXXXXXXXXXXXXXXXXXXXXLGVVECVGVAMMVMVRSALLTDEVSVALRTLMSF 411 G W R+++ EL IK+D+ R +P + +F G + +L +L ++ ++ Y+QGMHE+L+ L F L +H + A P + + +P+YLEHDA+ LF +LM EP Y E R +S P + P+D P +V +R+Q ++++ D E+ +N + E+APQ+YGI+W RLLF REF ++D+L +WD +FA L +V+ + VAM++ +R AL+ L LM + Sbjct: 143 GSLWNRFFQDKELKGMIKQDVLRTFP---EIRYFQNGDVRTMLTDILFCYARENEQLLYKQGMHELLAPLVFVLHCDHQAFQHASETASPSEEMKSLLNPEYLEHDAYTLFSQLMETAEPWFSSYEREVRRGKDEMLTSIPFARPQDAGPSVAIVTKVNRIQDQLVKKHDVELHMHVNRL-EIAPQIYGIRWVRLLFGREFPLQDLLVMWDALFA----------------------DSITLDLVDYIFVAMLLYIRDALIASNFQTCLGLLMHY 391
BLAST of NO09G03190 vs. NCBI_GenBank
Match: XP_010794166.1 (PREDICTED: TBC1 domain family member 5 isoform X2 [Notothenia coriiceps]) HSP 1 Score: 140.2 bits (352), Expect = 3.200e-29 Identity = 86/275 (31.27%), Postives = 141/275 (51.27%), Query Frame = 0 Query: 143 GGAWKRYYEGMELLDEIKRDLTRLYPSGVDEAHFMEGKTQEVLLAVLCVWSTLHKATSYRQGMHEVLSVLFFALQEEHACSRGGGREALP-PSLAYITDPQYLEHDAFLLFDRLMVELEP---LYYVERPRAYSSTSSSFPSSSPRDESP---VVRLSHRLQGPVLQQADPEVWTSLNTVHEVAPQLYGIKWTRLLFAREFAMRDVLQLWDCMFAMMGEEXXXXXXXXXXXXXXXXXXXXXLGVVECVGVAMMVMVRSALLTDEVSVALRTLMSF 411 G W R+++ EL IK+D+ R +P + +F G + +L +L ++ ++ Y+QGMHE+L+ L F L +H + A P + + +P+YLEHDA+ LF +LM EP Y E R +S P + P+D P +V +R+Q ++++ D E+ +N + E+APQ+YGI+W RLLF REF ++D+L +WD +FA L +V+ + VAM++ +R AL+ L LM + Sbjct: 143 GSLWNRFFQDKELKGMIKQDVLRTFP---EIRYFQNGDVRTMLTDILFCYARENEQLLYKQGMHELLAPLVFVLHCDHQAFQHASETASPSEEMKSLLNPEYLEHDAYTLFSQLMETAEPWFSSYEREVRRGKDEMLTSIPFARPQDAGPSVAIVTKVNRIQDQLVKKHDVELHMHVNRL-EIAPQIYGIRWVRLLFGREFPLQDLLVMWDALFA----------------------DSITLDLVDYIFVAMLLYIRDALIASNFQTCLGLLMHY 391
BLAST of NO09G03190 vs. NCBI_GenBank
Match: XP_010794167.1 (PREDICTED: TBC1 domain family member 5 isoform X3 [Notothenia coriiceps]) HSP 1 Score: 140.2 bits (352), Expect = 3.200e-29 Identity = 86/275 (31.27%), Postives = 141/275 (51.27%), Query Frame = 0 Query: 143 GGAWKRYYEGMELLDEIKRDLTRLYPSGVDEAHFMEGKTQEVLLAVLCVWSTLHKATSYRQGMHEVLSVLFFALQEEHACSRGGGREALP-PSLAYITDPQYLEHDAFLLFDRLMVELEP---LYYVERPRAYSSTSSSFPSSSPRDESP---VVRLSHRLQGPVLQQADPEVWTSLNTVHEVAPQLYGIKWTRLLFAREFAMRDVLQLWDCMFAMMGEEXXXXXXXXXXXXXXXXXXXXXLGVVECVGVAMMVMVRSALLTDEVSVALRTLMSF 411 G W R+++ EL IK+D+ R +P + +F G + +L +L ++ ++ Y+QGMHE+L+ L F L +H + A P + + +P+YLEHDA+ LF +LM EP Y E R +S P + P+D P +V +R+Q ++++ D E+ +N + E+APQ+YGI+W RLLF REF ++D+L +WD +FA L +V+ + VAM++ +R AL+ L LM + Sbjct: 143 GSLWNRFFQDKELKGMIKQDVLRTFP---EIRYFQNGDVRTMLTDILFCYARENEQLLYKQGMHELLAPLVFVLHCDHQAFQHASETASPSEEMKSLLNPEYLEHDAYTLFSQLMETAEPWFSSYEREVRRGKDEMLTSIPFARPQDAGPSVAIVTKVNRIQDQLVKKHDVELHMHVNRL-EIAPQIYGIRWVRLLFGREFPLQDLLVMWDALFA----------------------DSITLDLVDYIFVAMLLYIRDALIASNFQTCLGLLMHY 391
BLAST of NO09G03190 vs. NCBI_GenBank
Match: XP_022797429.1 (TBC1 domain family member 5-like isoform X1 [Stylophora pistillata] >PFX21374.1 TBC1 domain family member 5 [Stylophora pistillata]) HSP 1 Score: 140.2 bits (352), Expect = 3.200e-29 Identity = 107/384 (27.86%), Postives = 166/384 (43.23%), Query Frame = 0 Query: 38 RGLAWRFFLNVLPPTREGGASIARDKAGEWPARLQAARGQYAVWKGQLYPDFNRVSKEGDD----DPLSALTMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAWKRYYEGMELLDEIKRDLTRLYPSGVDEAHFMEGKTQEVLLAVLCVWSTLHKATSYRQGMHEVLSVLFFALQEEHACSRGGGREALPPSLAYITDPQYLEHDAFLLFDRLMVELEPLY-------YVERPRAYSSTSSSFPSSSPRDESPVVRLSHRLQGPVLQQADPEVWTSLNTVHEVAPQLYGIKWTRLLFAREFAMRDVLQLWDCMFAMMGEEXXXXXXXXXXXXXXXXXXXXXLGVVECVGVAMMVMVRSALLTDEVSVALRTLMSF 411 R + W+ FL LP D+ EW + R Y +K D N+ E D +PLS WK+Y+ EL IK+DL RL P + F + K +E++L +L + ++A SY+QGMHE+L+ + + L E+ + +L + + DP+YLEHDAF LF +LM + E Y ER + F + +V+ +R+Q +L++ DPE+W L + ++ PQ+YG++W RLLF REF M DVL LWD +FA L +V+ + ++M+ +R+ LL+ SV + LM F Sbjct: 120 RSVCWKVFLECLP-----------DRKDEWITKTAKLRNDYVKFKNNCLFDPNKEKNEDMDLSVFNPLS-------------------------------------QEEASPWKQYFVDNELKSTIKQDLDRLSP---EIEFFQQSKVKEMMLNILFCHAKKNEALSYKQGMHELLAPIVYVLTEDAMIYQHIEGSSLGMA-KVLMDPKYLEHDAFALFVQLMDQTETWYLQIPVKGLPERNKFLDPHVEPFTDQEIIPSTAIVKKLNRIQEHMLRKYDPELWVHLKNL-DITPQVYGLRWIRLLFGREFPMDDVLVLWDALFA----------------------DGPMLDLVDYIYISMLKAIRNKLLSGSYSVCIGYLMKF 428
BLAST of NO09G03190 vs. NCBI_GenBank
Match: XP_022797430.1 (TBC1 domain family member 5-like isoform X2 [Stylophora pistillata]) HSP 1 Score: 140.2 bits (352), Expect = 3.200e-29 Identity = 107/384 (27.86%), Postives = 166/384 (43.23%), Query Frame = 0 Query: 38 RGLAWRFFLNVLPPTREGGASIARDKAGEWPARLQAARGQYAVWKGQLYPDFNRVSKEGDD----DPLSALTMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAWKRYYEGMELLDEIKRDLTRLYPSGVDEAHFMEGKTQEVLLAVLCVWSTLHKATSYRQGMHEVLSVLFFALQEEHACSRGGGREALPPSLAYITDPQYLEHDAFLLFDRLMVELEPLY-------YVERPRAYSSTSSSFPSSSPRDESPVVRLSHRLQGPVLQQADPEVWTSLNTVHEVAPQLYGIKWTRLLFAREFAMRDVLQLWDCMFAMMGEEXXXXXXXXXXXXXXXXXXXXXLGVVECVGVAMMVMVRSALLTDEVSVALRTLMSF 411 R + W+ FL LP D+ EW + R Y +K D N+ E D +PLS WK+Y+ EL IK+DL RL P + F + K +E++L +L + ++A SY+QGMHE+L+ + + L E+ + +L + + DP+YLEHDAF LF +LM + E Y ER + F + +V+ +R+Q +L++ DPE+W L + ++ PQ+YG++W RLLF REF M DVL LWD +FA L +V+ + ++M+ +R+ LL+ SV + LM F Sbjct: 120 RSVCWKVFLECLP-----------DRKDEWITKTAKLRNDYVKFKNNCLFDPNKEKNEDMDLSVFNPLS-------------------------------------QEEASPWKQYFVDNELKSTIKQDLDRLSP---EIEFFQQSKVKEMMLNILFCHAKKNEALSYKQGMHELLAPIVYVLTEDAMIYQHIEGSSLGMA-KVLMDPKYLEHDAFALFVQLMDQTETWYLQIPVKGLPERNKFLDPHVEPFTDQEIIPSTAIVKKLNRIQEHMLRKYDPELWVHLKNL-DITPQVYGLRWIRLLFGREFPMDDVLVLWDALFA----------------------DGPMLDLVDYIYISMLKAIRNKLLSGSYSVCIGYLMKF 428 The following BLAST results are available for this feature:
BLAST of NO09G03190 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO09G03190 ID=NO09G03190|Name=NO09G03190|organism=Nannochloropsis oceanica|type=gene|length=2978bpback to top protein sequence of NO09G03190.1 >NO09G03190.1-protein ID=NO09G03190.1-protein|Name=NO09G03190.1|organism=Nannochloropsis oceanica|type=polypeptide|length=916bpback to top Synonyms
Publications
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