NO09G03170, NO09G03170 (gene) Nannochloropsis oceanica

Overview
NameNO09G03170
Unique NameNO09G03170
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3085
Alignment locationchr9:921918..925002 +

Link to JBrowse

Properties
Property NameValue
DescriptionMalate dehydrogenase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:921918..925002 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO:0055114oxidation-reduction process
GO:0006091generation of precursor metabolites and energy
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016616oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0016491oxidoreductase activity
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR015955Lactate_DH/Glyco_Ohase_4_C
IPR036291NAD(P)-bd_dom_sf
IPR022383Lactate/malate_DH_C
IPR001236Lactate/malate_DH_N
Homology
[Close]
BLAST of NO09G03170 vs. NCBI_GenBank
Match: EWM27487.1 (malate dehydrogenase [Nannochloropsis gaditana])

HSP 1 Score: 572.0 bits (1473), Expect = 1.400e-159
Identity = 296/343 (86.30%), Postives = 320/343 (93.29%), Query Frame = 0 
Query:   64 MLAARTALRPVTM----AAARSFSSTKSTAAKVAVVGASGGIGQPLSMLLKLDPSIKELNLYDIVHTPGVAADLSHIPFPAKVKGFKGAESVEAALKGCDVIVVPAGVPRKPGMTRDDLFNINAGIVKTIAEAAAKVAPNACYLIISNPVNSTVPIFAEVLKKAGTYNPKKLFGVTTLDVIRANTFVSENQCTDPTSTNVTVVGGHAGTTILPLLSQVKGAKFSPEALAALTHRIQFGGDEVVKAKDGAGSATLSMAYAGYLFTAQLLKALKGEKGVVACTFVENTVTAAPFFAVPVTLGKGGVEKIHSLGELSAVEKEAMDKAIPDLVAQAKKGVEFVKNAK 403
            M AAR++LRP  M     A RS SSTK+TAA+VAVVGASGGIGQPLSMLLKLDPSIKELNLYDIVHTPGVAADLSHIPFPAKV G+KGA+S+ AAL+GCDVIVVPAGVPRKPGMTRDDLFNINAGIVKTIAEA+AKVAP ACYLIISNPVNSTVPIFAEVLKKAGTYNPKKLFGVTTLDVIRANTFV+ENQ TD   TNVTVVGGHAGTTILPLLSQVKGA F+P+ALAALTHRIQFGGDEVVKAKDGAGSATLSMAYAGYLFTA+LL+ALKGEK VVAC FVENT+TAAPFFA PVTLGK GVEK+H+LG LSA+E+EA++KA+PDL+AQAKKGVEFV+NAK
Sbjct:    1 MFAARSSLRPAAMGAVACAVRSISSTKATAARVAVVGASGGIGQPLSMLLKLDPSIKELNLYDIVHTPGVAADLSHIPFPAKVTGYKGADSIHAALEGCDVIVVPAGVPRKPGMTRDDLFNINAGIVKTIAEASAKVAPKACYLIISNPVNSTVPIFAEVLKKAGTYNPKKLFGVTTLDVIRANTFVAENQGTDVLQTNVTVVGGHAGTTILPLLSQVKGASFTPDALAALTHRIQFGGDEVVKAKDGAGSATLSMAYAGYLFTAKLLQALKGEKDVVACAFVENTLTAAPFFAAPVTLGKEGVEKVHALGSLSAMEQEALEKALPDLLAQAKKGVEFVQNAK 343
[Close]
BLAST of NO09G03170 vs. NCBI_GenBank
Match: AIT70155.1 (malate dehydrogenase [Undaria pinnatifida])

HSP 1 Score: 415.2 bits (1066), Expect = 2.300e-112
Identity = 215/336 (63.99%), Postives = 257/336 (76.49%), Query Frame = 0 
Query:   65 LAARTALRPVTMAAARSFSSTKSTAAKVAVVGASGGIGQPLSMLLKLDPSIKELNLYDIVHTPGVAADLSHIPFPAKVKGFKGAESVEAALKGCDVIVVPAGVPRKPGMTRDDLFNINAGIVKTIAEAAAKVAPNACYLIISNPVNSTVPIFAEVLKKAGTYNPKKLFGVTTLDVIRANTFVSENQCTDPTSTNVTVVGGHAGTTILPLLSQVKGAKFSPEALAALTHRIQFGGDEVVKAKDGAGSATLSMAYAGYLFTAQLLKALKGEKGVVACTFVENTVTAAPFFAVPVTLGKGGVEKIHSLGELSAVEKEAMDKAIPDLVAQAKKGVEFVKN 401
            LA   A + + +++AR+F+ T     KVAVVGA+GGIGQP+S+LLKL   I+ L+L+DIV+TPGVAAD+SH    AKV G KGAE +  AL GCD++V+PAGVPRKPGMTRDDLFN NA IVK IAE  +K  PNAC+LIISNPVNSTVPIFA+VLK  G YNP+KL GVTTLDV+RA TFV+ENQ  D +   V V+GGHAGTTI+PLLSQVKGA FS E +AALTHRIQFGGDEVV+AKDGAGSATLSMA+AG  F  ++L  L G K V  CTFV+  +T APFFA P TLGK GV KIH   +L+  E+  +D  +P L+  AKKG +FVKN
Sbjct:   13 LATPMASKALGVSSARTFTGTTRAQNKVAVVGAAGGIGQPMSLLLKLSGKIEHLSLFDIVNTPGVAADISHCDSKAKVTGHKGAEEMGTALDGCDIVVIPAGVPRKPGMTRDDLFNTNASIVKGIAEQCSKSCPNACFLIISNPVNSTVPIFADVLKANGVYNPQKLMGVTTLDVVRAKTFVAENQGMDVSKVKVDVIGGHAGTTIMPLLSQVKGATFSEEDIAALTHRIQFGGDEVVQAKDGAGSATLSMAHAGAYFAGRVLDGLNGVKNVKECTFVDCDLTDAPFFASPCTLGKDGVSKIHGFSKLTKFEQSLVDDNVPALITMAKKGSDFVKN 348
[Close]
BLAST of NO09G03170 vs. NCBI_GenBank
Match: AIT70167.1 (malate dehydrogenase [Dictyopteris undulata])

HSP 1 Score: 414.1 bits (1063), Expect = 5.100e-112
Identity = 212/336 (63.10%), Postives = 258/336 (76.79%), Query Frame = 0 
Query:   65 LAARTALRPVTMAAARSFSSTKSTAAKVAVVGASGGIGQPLSMLLKLDPSIKELNLYDIVHTPGVAADLSHIPFPAKVKGFKGAESVEAALKGCDVIVVPAGVPRKPGMTRDDLFNINAGIVKTIAEAAAKVAPNACYLIISNPVNSTVPIFAEVLKKAGTYNPKKLFGVTTLDVIRANTFVSENQCTDPTSTNVTVVGGHAGTTILPLLSQVKGAKFSPEALAALTHRIQFGGDEVVKAKDGAGSATLSMAYAGYLFTAQLLKALKGEKGVVACTFVENTVTAAPFFAVPVTLGKGGVEKIHSLGELSAVEKEAMDKAIPDLVAQAKKGVEFVKN 401
            + A  AL+ + ++A RSF+++     KVAVVGA+GGIGQP+S+L+KL   I+ L+L+DIV+TPGVAADLSH     KV   KG E + AAL GCD++V+PAGVPRKPGMTRDDLFN NA IVK IAE  AK  PNAC+LIISNPVNSTVPIF +VLK AG ++P+KL GVT LD+ RANTFV+ENQ  D    +V V+GGHAGTTI+PLLSQVKGAKFS E + ALTHRIQFGGDEVVKAKDGAGSATLSMA+AG  F  ++L  L G  GV  CTFVE+++T AP+FA P TLGK GV ++H  G LS  E+  +D+ +P L+  AKKG +FVKN
Sbjct:   14 MVAPVALKALGVSATRSFTASARAKNKVAVVGAAGGIGQPMSLLMKLSGKIEHLSLFDIVNTPGVAADLSHCNTKGKVSAHKGPEEMGAALDGCDLVVIPAGVPRKPGMTRDDLFNTNASIVKGIAEQCAKSCPNACFLIISNPVNSTVPIFGDVLKTAGVFDPRKLMGVTMLDICRANTFVAENQGMDVDKVSVDVIGGHAGTTIMPLLSQVKGAKFSEEDIKALTHRIQFGGDEVVKAKDGAGSATLSMAHAGAYFAERVLDGLNGATGVKECTFVESSLTDAPYFASPCTLGKEGVSEVHGFGTLSPFEQSLVDENVPALIKMAKKGTDFVKN 349
[Close]
BLAST of NO09G03170 vs. NCBI_GenBank
Match: AIT70171.1 (malate dehydrogenase [Saccharina sculpera])

HSP 1 Score: 412.5 bits (1059), Expect = 1.500e-111
Identity = 213/336 (63.39%), Postives = 259/336 (77.08%), Query Frame = 0 
Query:   65 LAARTALRPVTMAAARSFSSTKSTAAKVAVVGASGGIGQPLSMLLKLDPSIKELNLYDIVHTPGVAADLSHIPFPAKVKGFKGAESVEAALKGCDVIVVPAGVPRKPGMTRDDLFNINAGIVKTIAEAAAKVAPNACYLIISNPVNSTVPIFAEVLKKAGTYNPKKLFGVTTLDVIRANTFVSENQCTDPTSTNVTVVGGHAGTTILPLLSQVKGAKFSPEALAALTHRIQFGGDEVVKAKDGAGSATLSMAYAGYLFTAQLLKALKGEKGVVACTFVENTVTAAPFFAVPVTLGKGGVEKIHSLGELSAVEKEAMDKAIPDLVAQAKKGVEFVKN 401
            LA   A + + ++++R+F+ T     KV VVGA+GGIGQP+S+LLKL   I+ L+L+DIV+TPGVAAD+SH    AKV G KGAE + AAL G D++V+PAGVPRKPGMTRDDLFN NA IVK IAE  +K  PNAC+LIISNPVNSTVPIFA+VLK  G YNPKKL GVTTLDV+RA TFV+E+Q  D +   V V+GGHAGTTI+PLLSQVKGAKF+ E +AALTHRIQFGGDEVV+AKDGAGSATLSMA+AG  F  ++L  L G K V  CTFV+  +T APFFA P TLGK GV KIH   +L+  E+  +D+ +P L++ AKKG +FVKN
Sbjct:   13 LATPMASKALGVSSSRAFTGTARAQNKVTVVGAAGGIGQPMSLLLKLSGKIEHLSLFDIVNTPGVAADISHCDAKAKVTGHKGAEEMGAALDGSDIVVIPAGVPRKPGMTRDDLFNTNASIVKGIAEQCSKSCPNACFLIISNPVNSTVPIFADVLKANGVYNPKKLMGVTTLDVVRAKTFVAEHQGMDVSKMKVDVIGGHAGTTIMPLLSQVKGAKFTEEDIAALTHRIQFGGDEVVQAKDGAGSATLSMAHAGAYFAGRVLDGLNGVKNVKECTFVDCDLTDAPFFASPCTLGKDGVSKIHGFSKLTPFEQSLVDENVPSLISMAKKGSDFVKN 348
[Close]
BLAST of NO09G03170 vs. NCBI_GenBank
Match: AIT70156.1 (malate dehydrogenase [Sargassum henslowianum] >AIT70160.1 malate dehydrogenase [Sargassum vachellianum])

HSP 1 Score: 409.8 bits (1052), Expect = 9.500e-111
Identity = 212/336 (63.10%), Postives = 255/336 (75.89%), Query Frame = 0 
Query:   65 LAARTALRPVTMAAARSFSSTKSTAAKVAVVGASGGIGQPLSMLLKLDPSIKELNLYDIVHTPGVAADLSHIPFPAKVKGFKGAESVEAALKGCDVIVVPAGVPRKPGMTRDDLFNINAGIVKTIAEAAAKVAPNACYLIISNPVNSTVPIFAEVLKKAGTYNPKKLFGVTTLDVIRANTFVSENQCTDPTSTNVTVVGGHAGTTILPLLSQVKGAKFSPEALAALTHRIQFGGDEVVKAKDGAGSATLSMAYAGYLFTAQLLKALKGEKGVVACTFVENTVTAAPFFAVPVTLGKGGVEKIHSLGELSAVEKEAMDKAIPDLVAQAKKGVEFVKN 401
            +AA  A R V +++ R+++ T     KV VVGA+GGIGQP+S+L+KL   I  L+L+DIV+TPGVAAD+ H     KV G+KGAE + AAL G DV+V+PAGVPRKPGMTRDDLFN NA IVK IAE  AK  P AC+LIISNPVNSTVPIF+EVLK +G Y+P KL GVTTLDV RA TFV+ENQ  D     V V+GGHAGTTI+PLLSQVKGA F+ E + ALTHRIQFGGDEVVKAKDGAGSATLSMA+AG  F  ++L  L G KG+  CTFVE+ +T+APFFA P TLG  GV +IH  G+LSA E+  +D  +P LV  A+KG++FVKN
Sbjct:   13 MAAPMASRAVGVSSVRAYNGTPRAQNKVTVVGAAGGIGQPMSLLMKLSGKIDHLSLFDIVNTPGVAADIGHCNSKGKVMGYKGAEEMAAALDGSDVVVIPAGVPRKPGMTRDDLFNTNASIVKGIAEQCAKSCPKACFLIISNPVNSTVPIFSEVLKASGVYDPAKLMGVTTLDVARAKTFVAENQGMDVDKVEVDVIGGHAGTTIMPLLSQVKGANFTEEDIKALTHRIQFGGDEVVKAKDGAGSATLSMAHAGAYFAEKVLDGLNGVKGIKECTFVESPLTSAPFFASPCTLGTEGVSEIHGYGQLSAFEQSLVDDNVPALVKMAQKGIDFVKN 348
[Close]
BLAST of NO09G03170 vs. NCBI_GenBank
Match: AIT70175.1 (malate dehydrogenase [Saccharina japonica] >AIW62924.1 malate dehydrogenase 2 [Saccharina japonica])

HSP 1 Score: 409.5 bits (1051), Expect = 1.200e-110
Identity = 212/336 (63.10%), Postives = 258/336 (76.79%), Query Frame = 0 
Query:   65 LAARTALRPVTMAAARSFSSTKSTAAKVAVVGASGGIGQPLSMLLKLDPSIKELNLYDIVHTPGVAADLSHIPFPAKVKGFKGAESVEAALKGCDVIVVPAGVPRKPGMTRDDLFNINAGIVKTIAEAAAKVAPNACYLIISNPVNSTVPIFAEVLKKAGTYNPKKLFGVTTLDVIRANTFVSENQCTDPTSTNVTVVGGHAGTTILPLLSQVKGAKFSPEALAALTHRIQFGGDEVVKAKDGAGSATLSMAYAGYLFTAQLLKALKGEKGVVACTFVENTVTAAPFFAVPVTLGKGGVEKIHSLGELSAVEKEAMDKAIPDLVAQAKKGVEFVKN 401
            LAA  A + + ++++R+F+ T     KV VVGA+GGIGQP+S+LLKL   I+ L+L+DIV+TPGVAAD+SH    AKV G KGAE + AAL G D++V+PAGVPRKPGMTRDDLFN NA IVK IAE  +K  PNAC LIISNPVNSTVPIFA+VLK  G YNP+KL GVTTLDV+RA TFV+E+Q  D +   V V+GGHAGTTI+PLLSQVKGAKF+ E +AALTHRIQFGGDEVV+AKDGAGSATLSMA+AG  F  ++L  L G+K V  CTFV+  +T APFFA P TLG  GV KIH    L+  E+  +D+ +P L++ AKKG +FVKN
Sbjct:   13 LAAPMASKALGVSSSRAFTGTARAQNKVTVVGAAGGIGQPMSLLLKLSGKIEHLSLFDIVNTPGVAADISHCDAKAKVTGHKGAEEMGAALDGSDIVVIPAGVPRKPGMTRDDLFNTNASIVKGIAEQVSKSCPNACILIISNPVNSTVPIFADVLKANGVYNPQKLMGVTTLDVVRAKTFVAEHQGMDVSKIKVDVIGGHAGTTIMPLLSQVKGAKFTEEDIAALTHRIQFGGDEVVQAKDGAGSATLSMAHAGAYFAGRVLDGLNGKKNVKECTFVDCDLTDAPFFASPCTLGTDGVSKIHGFSNLTPFEQSLVDENVPSLISMAKKGSDFVKN 348
[Close]
BLAST of NO09G03170 vs. NCBI_GenBank
Match: AIT70164.1 (malate dehydrogenase [Sargassum muticum])

HSP 1 Score: 409.1 bits (1050), Expect = 1.600e-110
Identity = 212/336 (63.10%), Postives = 254/336 (75.60%), Query Frame = 0 
Query:   65 LAARTALRPVTMAAARSFSSTKSTAAKVAVVGASGGIGQPLSMLLKLDPSIKELNLYDIVHTPGVAADLSHIPFPAKVKGFKGAESVEAALKGCDVIVVPAGVPRKPGMTRDDLFNINAGIVKTIAEAAAKVAPNACYLIISNPVNSTVPIFAEVLKKAGTYNPKKLFGVTTLDVIRANTFVSENQCTDPTSTNVTVVGGHAGTTILPLLSQVKGAKFSPEALAALTHRIQFGGDEVVKAKDGAGSATLSMAYAGYLFTAQLLKALKGEKGVVACTFVENTVTAAPFFAVPVTLGKGGVEKIHSLGELSAVEKEAMDKAIPDLVAQAKKGVEFVKN 401
            +AA    R V +++ R+FS T     KV VVGA+GGIGQP+S+L+KL   I  L+L+DIV+TPGVA D+ H     KV G+KGAE + AAL G DV+V+PAGVPRKPGMTRDDLFN NA IVK IAE  AK  P AC+LIISNPVNSTVPIFAEVLK +G Y+P KL GVTTLDV RA TFV+ENQ  D    +V V+GGHAGTTI+PLLSQVKGA F+ E + ALTHRIQFGGDEVVKAKDGAGSATLSMA+AG  F  ++L  L G KG+  CTFVE+ +T+APFFA P TLG  GV +IH  G+LS  E+  +D+ +P LV  A+KG++FVKN
Sbjct:   13 MAAPMVSRAVGISSVRAFSGTPRAQNKVTVVGAAGGIGQPMSLLMKLSGKIDHLSLFDIVNTPGVAVDIGHCNSKGKVMGYKGAEEMAAALDGSDVVVIPAGVPRKPGMTRDDLFNTNASIVKGIAEQCAKSCPKACFLIISNPVNSTVPIFAEVLKASGVYDPAKLMGVTTLDVARAKTFVAENQGMDVDKVDVDVIGGHAGTTIMPLLSQVKGANFTEEDIKALTHRIQFGGDEVVKAKDGAGSATLSMAHAGAYFAEKVLDGLNGVKGIKECTFVESPLTSAPFFASPCTLGTEGVSEIHGYGQLSPFEQALVDENVPALVKMAQKGIDFVKN 348
[Close]
BLAST of NO09G03170 vs. NCBI_GenBank
Match: AIT70180.1 (malate dehydrogenase [Sargassum hemiphyllum var. chinense])

HSP 1 Score: 409.1 bits (1050), Expect = 1.600e-110
Identity = 212/336 (63.10%), Postives = 254/336 (75.60%), Query Frame = 0 
Query:   65 LAARTALRPVTMAAARSFSSTKSTAAKVAVVGASGGIGQPLSMLLKLDPSIKELNLYDIVHTPGVAADLSHIPFPAKVKGFKGAESVEAALKGCDVIVVPAGVPRKPGMTRDDLFNINAGIVKTIAEAAAKVAPNACYLIISNPVNSTVPIFAEVLKKAGTYNPKKLFGVTTLDVIRANTFVSENQCTDPTSTNVTVVGGHAGTTILPLLSQVKGAKFSPEALAALTHRIQFGGDEVVKAKDGAGSATLSMAYAGYLFTAQLLKALKGEKGVVACTFVENTVTAAPFFAVPVTLGKGGVEKIHSLGELSAVEKEAMDKAIPDLVAQAKKGVEFVKN 401
            +AA    R V +++ R+FS T     KV VVGA+GGIGQP+S+L+KL   I  L+L+DIV+TPGVAAD+ H     KV G+KGAE + A+L G DV+V+PAGVPRKPGMTRDDLFN NA IVK IAE  AK  P AC+LIISNPVNSTVPIFAEVLK +G Y+P KL GVTTLDV RA TFV+ENQ  D     V V+GGHAGTTI+PLLSQVKGA F+ E + ALTHRIQFGGDEVVKAKDGAGSATLSMA+AG  F  ++L  L G KG+  CTFVE+ +T+APFFA P TLG  GV +IH  G+LS  E+  +D+ +P LV  A+KG++FVKN
Sbjct:   13 MAAPMVSRAVGVSSVRAFSGTPRAQNKVTVVGAAGGIGQPMSLLMKLSGKIDHLSLFDIVNTPGVAADIGHCNSKGKVMGYKGAEEMAASLDGSDVVVIPAGVPRKPGMTRDDLFNTNASIVKGIAEQCAKSCPKACFLIISNPVNSTVPIFAEVLKASGVYDPAKLMGVTTLDVARAKTFVAENQGMDVDKVEVDVIGGHAGTTIMPLLSQVKGANFTEEDIKALTHRIQFGGDEVVKAKDGAGSATLSMAHAGAYFAEKVLDGLNGVKGIKECTFVESPLTSAPFFASPCTLGTEGVSEIHGYGQLSPFEQTLVDENVPALVKMAQKGIDFVKN 348
[Close]
BLAST of NO09G03170 vs. NCBI_GenBank
Match: AIT70182.1 (malate dehydrogenase [Sargassum thunbergii])

HSP 1 Score: 408.3 bits (1048), Expect = 2.800e-110
Identity = 212/336 (63.10%), Postives = 254/336 (75.60%), Query Frame = 0 
Query:   65 LAARTALRPVTMAAARSFSSTKSTAAKVAVVGASGGIGQPLSMLLKLDPSIKELNLYDIVHTPGVAADLSHIPFPAKVKGFKGAESVEAALKGCDVIVVPAGVPRKPGMTRDDLFNINAGIVKTIAEAAAKVAPNACYLIISNPVNSTVPIFAEVLKKAGTYNPKKLFGVTTLDVIRANTFVSENQCTDPTSTNVTVVGGHAGTTILPLLSQVKGAKFSPEALAALTHRIQFGGDEVVKAKDGAGSATLSMAYAGYLFTAQLLKALKGEKGVVACTFVENTVTAAPFFAVPVTLGKGGVEKIHSLGELSAVEKEAMDKAIPDLVAQAKKGVEFVKN 401
            +AA    R V +++ R+FS T     KV VVGA+GGIGQP+S+L+KL   I  L+L+DIV+TPGVAAD+ H     KV G+KGAE + A+L G DV+V+PAGVPRKPGMTRDDLFN NA IVK IAE  AK  P AC+LIISNPVNSTVPIFAEVLK +G Y+P KL GVTTLDV RA TFV+ENQ  D     V V+GGHAGTTI+PLLSQVKGA F+ E + ALTHRIQFGGDEVVKAKDGAGSATLSMA+AG  F  ++L  L G KG+  CTFVE+ +T+APFFA P TLG  GV +IH  G+LS  E+  +D+ +P LV  A+KG++FVKN
Sbjct:   13 MAAPMVSRAVGVSSVRAFSGTPRAQNKVTVVGAAGGIGQPMSLLMKLSGKIDHLSLFDIVNTPGVAADIGHCNSKGKVMGYKGAEEMAASLDGSDVVVIPAGVPRKPGMTRDDLFNTNASIVKGIAEQCAKSCPKACFLIISNPVNSTVPIFAEVLKASGVYDPAKLMGVTTLDVARAKTFVAENQGMDVDRVEVDVIGGHAGTTIMPLLSQVKGATFTEEDIKALTHRIQFGGDEVVKAKDGAGSATLSMAHAGAYFAEKVLDGLNGVKGIKECTFVESPLTSAPFFASPCTLGTEGVSEIHGYGQLSPFEQALVDENVPALVKMAQKGIDFVKN 348
[Close]
BLAST of NO09G03170 vs. NCBI_GenBank
Match: XP_009040543.1 (hypothetical protein AURANDRAFT_60302 [Aureococcus anophagefferens] >EGB04807.1 hypothetical protein AURANDRAFT_60302 [Aureococcus anophagefferens])

HSP 1 Score: 407.9 bits (1047), Expect = 3.600e-110
Identity = 206/321 (64.17%), Postives = 253/321 (78.82%), Query Frame = 0 
Query:   78 AARSFSSTKSTAAKVAVVGASGGIGQPLSMLLKLDPSIKELNLYDIVHTPGVAADLSHIPFPAKVKGFKGAESVEAALKGCDVIVVPAGVPRKPGMTRDDLFNINAGIVKTIAEAAAKVAPNACYLIISNPVNSTVPIFAEVLKKAGTYNPKKLFGVTTLDVIRANTFVSENQCTDPTSTNVTVVGGHAGTTILPLLSQVKGAKFSPEALAALTHRIQFGGDEVVKAKDGAGSATLSMAYAGYLFTAQLLKALKGEKGVVACTFVENTVTAAPFFAVPVTLGKGGVEKIHSLGELSAVEKEAMDKAIPDLVAQAKKGVEFV 399
            A R+  +    A+ VAV+GA+GGIGQP+S+L+K  P + EL+LYD+V+TPGVAADLSH   PA V+   G  +   AL+G DV+V+PAGVPRKPGMTRDDLFN NA IV+++AEA A   PNAC+LII+NPVNSTVPIFAE LKK G Y+  KLFGVTTLDV+RA TFV+ENQ  D  +T+V V+GGHAGTTILPLLSQ++GA FS + +  LTHRI FGGDEVV+AKDGAGSATLSMAYAG  FT ++L+AL G  G+  C FVE+ VT AP+F+ PVTLGK GVE IH  G LS  E++ +DKA+PDL+AQA+KGV+FV
Sbjct:    7 AQRTVGTHARYASNVAVLGAAGGIGQPMSLLIKQSPLVNELSLYDVVNTPGVAADLSHCSTPATVRSTVGMGNAAEALEGMDVVVIPAGVPRKPGMTRDDLFNTNASIVQSLAEACATTCPNACFLIIANPVNSTVPIFAETLKKHGVYDKNKLFGVTTLDVVRAKTFVAENQGGDVLNTDVDVIGGHAGTTILPLLSQIEGASFSQDDIDKLTHRIMFGGDEVVQAKDGAGSATLSMAYAGAHFTFKVLEALNGATGITECAFVESDVTDAPYFSSPVTLGKNGVETIHGYGTLSPFEQDVLDKAVPDLIAQAEKGVKFV 327
The following BLAST results are available for this feature:
BLAST of NO09G03170 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27487.11.400e-15986.30malate dehydrogenase [Nannochloropsis gaditana][more]
AIT70155.12.300e-11263.99malate dehydrogenase [Undaria pinnatifida][more]
AIT70167.15.100e-11263.10malate dehydrogenase [Dictyopteris undulata][more]
AIT70171.11.500e-11163.39malate dehydrogenase [Saccharina sculpera][more]
AIT70156.19.500e-11163.10malate dehydrogenase [Sargassum henslowianum] >AIT... [more]
AIT70175.11.200e-11063.10malate dehydrogenase [Saccharina japonica] >AIW629... [more]
AIT70164.11.600e-11063.10malate dehydrogenase [Sargassum muticum][more]
AIT70180.11.600e-11063.10malate dehydrogenase [Sargassum hemiphyllum var. c... [more]
AIT70182.12.800e-11063.10malate dehydrogenase [Sargassum thunbergii][more]
XP_009040543.13.600e-11064.17hypothetical protein AURANDRAFT_60302 [Aureococcus... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL120nonsL120Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR021ncniR021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010854NSK010854Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G03170.1NO09G03170.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100855g2gene3073Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G03170.1NO09G03170.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G03170 ID=NO09G03170|Name=NO09G03170|organism=Nannochloropsis oceanica|type=gene|length=3085bp
GGAACGCCACCCTCTAGTTGCCATCAATCCCCTGAAACTTTTTTCTTTCC
ATTTTCCCTTTCTGTCCCTTTGATTTAATACATCCCCACTTTAGGCATTT
CCCCCTCCCTCCCTTCCTACCTCCTTCCCTCCAATCTTCGTGACTTCACG
CGCCTCCCTTCCACGGGACTCCGTACGTCTCCTCACACACCACCTCGTCC
ATATCAAACCTCAATGATGCCGGGGGCTGCTTCGATGACACTGCATGCCC
CTCCTTCCCTTCCTGTGCCGCTTCCTCGGCAGGCGTGGCGGCATAGCCCA
CACAAACCACCACCGGCACTATGTACCGGGAAGGCACCTTCAACAACCTC
CTCAACCGCCGGGCATCAAACCCCTCCATGGGGCACGTCGTCAGTCCATG
CGATGATGCAGCCAACATAAAGGTCATGGCGGCAAGCATCGTATTCTTCG
CTGCCCAGGTCTCCGGTCGCTCGAAGCGTGGCACTGGTTTGAATGTCCCC
ACCACGTTCATAAACATTCTCTTTCCCCAGTACAAACACCATCGAACCAA
AGAAAATCGATACCCCGTCGAGAAAAGGGTCGCGAAAAAAGAAATTTGCT
TGAGAAAGCCTTCTGGGAAAGTGCCTGTTCGACGAAAGAGCTCTACGACA
CGCGGCATGAGCCGCCCACTTTCCAAGTCGGCGGCAAAGATAACAGTGAC
AGGGGCGTTACGCACCCGGTCACCGTTGGCGCCGAGCATGGCATGCGTGG
CCACCTTGTCGCGAAGGGCGGGGTCTTGCAGGACGATGAGTTTGAACGGC
TGGGTATTGAAGGAGGAAGGAGAGCGTTGTGTCAGGCGGAGGAGGTCGTT
GAGGATGGTTCTTGACACGGACTTATGCGCGTAGTGAGAGTTGGAGTAAC
GGTTCCGCACGACGTCGGAAAAGGGTGCGGCCAGAATGGAAGGTGGCGGT
TGATTCCCTCCCAAACTAGCCGCCGCAGCAGCAGCAGCGTCGAGAACCAC
AGGTGAAGGAGGATTGGAGGGGGAGGAGGCTCGTGATGATAATGCTGGGG
GTGATGGTGACCGCAGGACAAAACCCTCGGCCGTCGCAGGCAGCAGGGTC
AGGAGAAGGAATGGCAAAATGAGGAGGCGCATCATCTAGCGTAGTAATAG
CTGGACAGTCGCCTGTGGTGTGAGGTGTGAGGATTAGATGATCGAAGGGA
GGGGAGAAGCGATGGGGGAGGGATTTGTTCTTTTCGATGACGGAGGCTTG
GCTGCCGCGACGAGAGAAGCAGGGAGAGATGACACGAAACTCCCCCGCAC
ACGCGCATTACATGTTGCGCCCTTGTCCACATAATAATGGAACACAGCAC
AGCATGGCAGCAGTCTCCTCTTCAAGTCGCTTTATCGCCCCAAGCGATGA
GGGAGGCACCTAAAACCCATCTGCCTTCTTGATTCGATTCTACTGATGGC
GCAAGCATGCAATGACGACGACAACCACACGTTCTGGACGCTGTCGCCTC
CAACCCATATATTGCCACGCTTTTCTTATCAATCGTACAACCTTTCTGCT
GTGCGCCTACCGCGTGCGCCCGCCACTCCTTTCCCTCGTCGCTCACATGT
ATTTCCCCGCTTCCCCGTCCCAGGCCACAGACCACTGCCACAAACCAAAC
ATGCTTGCTGCTCGTACGGCTCTGCGTCCCGTTACTATGGCCGCTGCCCG
CTCCTTCTCCTCCACCAAGTCTACGGCCGCCAAGGTTGCTGTGGTGGGTG
CGTCGGGAGGCATTGGGCAGCCCTTATCCATGCTCCTAAAGCTGGACCCC
AGCATCAAGGAGCTCAACTTGTACGATATTGTGCACACCCCCGGTGTGGC
CGCGGATTTGTCCCACATCCCCTTCCCTGCGAAAGTCAAGGGATTCAAAG
GTGCGGAATCCGTCGAAGCCGCGCTGAAGGGATGCGATGTGATTGTTGTC
CCGGCCGGCGTGCCGCGAAAGCCTGGTATGACCCGTGACGACCTCTTCAA
CATCAATGCCGGCATTGTGAAAACAATTGCTGAGGCCGCCGCCAAGGTGG
CGCCCAATGCCTGCTATTTGATCATCTCTAACCCGGTCAATTCCACAGTG
CCCATCTTTGCGGAGGTGCTCAAGAAGgtgggtataggtgggagtcaatc
atggctgcaggcatccttgctccctcccttcctgacacttctcactcctt
cctgatgcaatccatcttgtcatgtgttacattcacctcctttctttctc
ttctacctcctttcttcctttcctccgtgccagGCGGGGACCTACAACCC
CAAGAAACTCTTCGGAGTCACCACGCTGGACGTCATCCGCGCCAACACCT
TCGTGTCCGAGAATCAATGCACGGATCCTACCTCCACCAACGTGACTGTC
GTGGGCGGTCACGCCGGGACGACCATCCTTCCCCTCTTGTCTCAAGTGAA
GGGAGCCAAGTTCTCCCCCGAGGCCCTGGCGGCACTGACCCACCGCATTC
AGTTCGGAGGGGACGAGGTGGTTAAGGCTAAGGATGGCGCCGGATCCGCG
ACCCTAAGCATGGCATATGCTGGCTATTTGTTCACGGCCCAGTTGCTCAA
GGCCCTCAAGGGCGAGAAGGGTGTGGTGGCGTGCACTTTCGTGGAGAACA
CCGTGACGGCCGCGCCCTTTTTCGCCGTGCCTGTGACGTTGGGGAAGGGG
GGGGTGGAGAAAATCCATAGTTTGGGTGAGCTCTCGGCCGTGGAGAAGGA
GGCCATGGACAAGGCGATTCCTGATTTGGTCGCGCAGGCCAAGAAGGGGG
TGGAGTTCGTGAAGAACGCTAAATAGAGGGGAGGGAGGGAGAGAAGGAGG
AAGGGAGGGAGGGAGAAAAGGAGGGACAGTTTTGATTATGCGAGTTGTTA
AGTAGAGAAATATGTATCCTAGGCTCAGCGGAGAGAGACGGAAAGGGAGA
GGAGAAAACGGGCAAGAGAGCAAGGGAATGTAGTAGCACACAAGAGAGGG
AAGGAGGGAGGGAGGTAGGGAGGGAGGGAGTAGTCTCTCACAACAAACTA
GAAAATAAGAAGTGAAGCATAGGAAGGAAACGAGT
back to top

protein sequence of NO09G03170.1

>NO09G03170.1-protein ID=NO09G03170.1-protein|Name=NO09G03170.1|organism=Nannochloropsis oceanica|type=polypeptide|length=403bp
MTTTTTRSGRCRLQPIYCHAFLINRTTFLLCAYRVRPPLLSLVAHMYFPA
SPSQATDHCHKPNMLAARTALRPVTMAAARSFSSTKSTAAKVAVVGASGG
IGQPLSMLLKLDPSIKELNLYDIVHTPGVAADLSHIPFPAKVKGFKGAES
VEAALKGCDVIVVPAGVPRKPGMTRDDLFNINAGIVKTIAEAAAKVAPNA
CYLIISNPVNSTVPIFAEVLKKAGTYNPKKLFGVTTLDVIRANTFVSENQ
CTDPTSTNVTVVGGHAGTTILPLLSQVKGAKFSPEALAALTHRIQFGGDE
VVKAKDGAGSATLSMAYAGYLFTAQLLKALKGEKGVVACTFVENTVTAAP
FFAVPVTLGKGGVEKIHSLGELSAVEKEAMDKAIPDLVAQAKKGVEFVKN
AK*
back to top
Synonyms
Publications