NO09G03050, NO09G03050 (gene) Nannochloropsis oceanica

Overview
NameNO09G03050
Unique NameNO09G03050
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3065
Alignment locationchr9:889570..892634 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:889570..892634 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO09G03050 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL120nonsL120Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR021ncniR021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010839NSK010839Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G03050.1NO09G03050.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|630134gene_4238Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G03050.1NO09G03050.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G03050 ID=NO09G03050|Name=NO09G03050|organism=Nannochloropsis oceanica|type=gene|length=3065bp
TTGCCCTGCCTCGAGCGGGCTTGACCATCCTCCACCACCCGTGGTGCCTG
CCAAGCGTGTCTGATAATCAAGCCAGCATGCTGATATGTGGCTAGGACAG
CTTTGTGAGGTCCGGAGCTGCTGCATTCGTGTTTATGCCCAACTGGCCTC
ACAATCCTTCTGCCCCTTCCCCTCCAAACAGACGCCACACAGGACGTCCA
CTCCCCCATCAAGAGACCCCAGCCCTCCACTCTGAACATCATGAATGATG
CTACCACCACCCACCAAAGCATCGTGGCCCGCCCCACTGTGGCCTCGACT
GTCCCGCCTCCTCCTCCGCCCCCCATCACGACTCTGACTCCCCCGACCGT
GTCCAGCCTCGCCCCCACTGTTACCTCCATCACACACGTGGAGAAACACC
CAAACCTCTTCATTAATGCACCCACCCTCTCCTCCTCCTTTTCATCCGTG
ACAACGGGTTCGGCGAGCTCCTTGGCGACGACCAGCAACAGCAGCAGCAG
CGGCAGCACCAGCACCAGCAGCAGCAATGGCATGGGTGAAGACGACCGGC
GACTGCACAACATGCCCAAGGCCCTAGCCAGCAAGTGCGTGGAAGCATTT
ATATCCTGGGGCCACGATCATAAGGGTAACCCTGCGGCCTATAAGCAATT
CTTGCGCACCAATCTTCCGCACTATCCGGGCGTGGACGCGGAGAAGGTAC
GCTTGTACATGAAGAATATCTGCGCCACCTACCACGAACGCTACATTCCT
GCGCGGGCCCGTGGTTACAAACAAGATTTTTTTGTCTGGTGGGAGAAGCG
TCCCGGTCGTGGCCGCCCCAAGAAGGACGTCTCAGTGCCGTCGGCTTATG
CCTTGGCCCACCACTTGGACCCGAGCTTGGCGCCGACCCGATACCGTGGT
GGCGGTATCCCTCAGAGCGAGAGCGGGGCAGGAAGAGGGTTCGCAGCCAA
TAAATCTCGTGATCGTCGCACGCCCGCTAAGCGTGCCAAGGCTTTCAAGG
CTCGAGGAGGGAGTAGCCATGATGAGATTCGGCTAAAAAGCTGTGGTGGT
CGCGGAGGAGGAGGCGGTGGGCGTGGGAACTCTGATGACGACTCGGAAGA
CGACAACGAGGTATACTACTACGGGAGTGACTTTGAAGAGATTGAGGAGA
TGGAAGAAGATAACGATGGCGAAGTCATGGCCGAAGACAACTACGACCGT
CGCCAGCAGAAGAACAAGGGTGCCGTCCAAGGCTTCTCCAAGTCGGGCCG
CGCAATCCGCCGCCCGTCTGATCCCTACCTTAAGGCAGTGCAGGAAGAGA
CGACGAAGCGCGCCCGCATCGAGGCAGCACTTGCTATGATAGAAATGGAC
GACAATAATGGCCGCGCCTTGGGTCGGGGGCCTCCTCCTCCCGGCGTCCG
CACCCCGTCACCGCCTCTGTTCAACACCCATCACGGGGCTTCTGTGTACC
CGGTGCGGCACCAGGGCCGCAGTGTGCTGCGCATTGAGTCTCCCGTACCT
TTGACTGACCGCGATGTGACGGATATTTTGACGGACCTTCGCAGCAGCCG
CTTTGCGCGCAGCATCAACAGCAACGGTGACCACGCGGGCGGTGGTGGTT
GCCAGGCGAGCAGCAATAGCAAGAGCGACCACAACCACACGGGTGCCACA
AAGACCATTACCAACGGGGACATTAAAACGCCGGATCCCGCGGTCGCGGT
GATTTCCACGCCCAGTGCTCGGTCTTTGCATCCTCGCCCGCTCGTTGCCC
CGCGTACCATCCGCACAGGCGATTATCCTTCCTCGGCTCACACTTCTCCT
CAGTCCTGCGCCCAGGCATTGGCCGGCCTCGTTAATCTGGGAGGCGTCCG
ACGTCTGGGTCATGTAACCTCTCCCTTAACTAATTTCGGGGGAATCAACC
CTCCCACGCACGCCCGTCCGCACCAGCATCACTACATCGTGCATCCTTCC
CCACATCCTGATGCGGCGGTGAAGCAAATGCACCTGACATCTCCTGCTGA
CGCTGCTGGTGCTGCTGCTGGTGTCGCTGCTACTACCCTACCCTCTGTCT
CGCCCATGCAATTCCTAGCTGGATCTAGTAGGTCGCCGCTGCAGCACCCG
GGCGAACGTTTATGTGCCCACGGATACCCCCACCAGCACAACGCCTACCC
CCACGCCAACATGAATATCCACAGAACTGCTTGCCCGCCGGTCTTCCACC
AGCATATGTATCAGCTTCAGTTTCATGACTGCCAGGACCCTCGGTGCACA
GGGTGTCCTGCCCCTACATTTCTCAACTCCCCTCTTCCTCGTCGTCCTCC
TCCTCTCCTTCTTCCCGCTACCCATCCCCTCCAATACCGAGGAGATAAAA
GTAAGGGCGCGGATCATCGCCGTCACTGATCATATGATTTTTGAAGAAGT
GTTTATGTTGAGGGGATCAGATGAGGAGGGGAAGATTTCTTTTTTTGTGG
ATTACGGGAGATGCTTAAAAACATGTACGGGTGCTTGTGAGCTAGAATGA
AAATGAGAGTAATTTAAAAAGACTATCCAAACGTGTGACTGTATTTGTAA
CACCAATCGTACGGTAATGACTGCAAAGTTTAACATCAAAGATGCGCACG
GAAAACAAAGGACATGAAGAGTGCCGTGTATACCTGCGTGTCTGCGATTG
TCGATAGAAGAGTATTAAAGCGAAAAAAATGAGGATTGAGATAGGAAAAA
GAGAAGAGGGAAGAAAGAGAAAAGGAAAGAAAGAGGAAGAGCTGGTGAAG
GAGAGGAAAAGAAAGACTGATTCCCAGCGAAAAGCAAAATTTATGTCAAC
CCGTGCTTAGGAAGCACCGAGATCTTGTCTCTCGTGTATGTGGGGATGGT
CAAGCGCAGCGTGTGCTCTTTTCGAGTTAAAACCACTGCCACAATTACAA
CCCAACCGCGACTAAATCGAACAACAACCAGCCAAGATGAAATGAACATA
CAGGCAGACAGCTACAAAAGCCTCCACAGAGCAAAAACGAAGATCGGAAA
TCAATGACAGAAACCATCTGAACCAACGGCCTCCCAACAAATGAAAAAGA
AGAAGTCAGCGTGTA
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protein sequence of NO09G03050.1

>NO09G03050.1-protein ID=NO09G03050.1-protein|Name=NO09G03050.1|organism=Nannochloropsis oceanica|type=polypeptide|length=713bp
MNDATTTHQSIVARPTVASTVPPPPPPPITTLTPPTVSSLAPTVTSITHV
EKHPNLFINAPTLSSSFSSVTTGSASSLATTSNSSSSGSTSTSSSNGMGE
DDRRLHNMPKALASKCVEAFISWGHDHKGNPAAYKQFLRTNLPHYPGVDA
EKVRLYMKNICATYHERYIPARARGYKQDFFVWWEKRPGRGRPKKDVSVP
SAYALAHHLDPSLAPTRYRGGGIPQSESGAGRGFAANKSRDRRTPAKRAK
AFKARGGSSHDEIRLKSCGGRGGGGGGRGNSDDDSEDDNEVYYYGSDFEE
IEEMEEDNDGEVMAEDNYDRRQQKNKGAVQGFSKSGRAIRRPSDPYLKAV
QEETTKRARIEAALAMIEMDDNNGRALGRGPPPPGVRTPSPPLFNTHHGA
SVYPVRHQGRSVLRIESPVPLTDRDVTDILTDLRSSRFARSINSNGDHAG
GGGCQASSNSKSDHNHTGATKTITNGDIKTPDPAVAVISTPSARSLHPRP
LVAPRTIRTGDYPSSAHTSPQSCAQALAGLVNLGGVRRLGHVTSPLTNFG
GINPPTHARPHQHHYIVHPSPHPDAAVKQMHLTSPADAAGAAAGVAATTL
PSVSPMQFLAGSSRSPLQHPGERLCAHGYPHQHNAYPHANMNIHRTACPP
VFHQHMYQLQFHDCQDPRCTGCPAPTFLNSPLPRRPPPLLLPATHPLQYR
GDKSKGADHRRH*
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Synonyms
Publications