NO09G03030, NO09G03030 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO09G03030 vs. NCBI_GenBank
Match: XP_005852692.1 (protein rer1a [Nannochloropsis gaditana CCMP526] >EKU23140.1 protein rer1a [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 323.2 bits (827), Expect = 5.400e-85 Identity = 154/178 (86.52%), Postives = 164/178 (92.13%), Query Frame = 0 Query: 2 MESDGDPSFVEQVAVSLQRKWQHILDRSTVYVGLRWVIFVVMLGLYALRVFYINGWFIVTYGLGIYLLNNFIGFLSPQMDPESEGPLLPTNEREEYRPFARRLPEFKFWYQCAKATWVAFGMTFFDFFDVPVYWPILLLYFISLFVLTMKRQIRHMIKHRYVPWSNGKAKYAGGGEKR 180 ME+ G+ S VEQ VS QRKWQHILD+STV+VGLRWVIF ML LYA+RVFYINGWFIVTYGLGIYLLNNFIGFLSPQMDPESEGPLLPT E EEYRPFARRLPEFKFWYQCAKATW+AF MTFF+FFDVPVYWPILLLYF+SLF+LTMKRQIRHMIKHRYVPWSN KA+YAG GEKR Sbjct: 1 MEAGGESSVVEQFVVSWQRKWQHILDQSTVHVGLRWVIFAAMLTLYAVRVFYINGWFIVTYGLGIYLLNNFIGFLSPQMDPESEGPLLPTQESEEYRPFARRLPEFKFWYQCAKATWIAFTMTFFEFFDVPVYWPILLLYFVSLFILTMKRQIRHMIKHRYVPWSNSKARYAGAGEKR 178
BLAST of NO09G03030 vs. NCBI_GenBank
Match: EWM27495.1 (protein rer1a [Nannochloropsis gaditana]) HSP 1 Score: 323.2 bits (827), Expect = 5.400e-85 Identity = 154/178 (86.52%), Postives = 164/178 (92.13%), Query Frame = 0 Query: 2 MESDGDPSFVEQVAVSLQRKWQHILDRSTVYVGLRWVIFVVMLGLYALRVFYINGWFIVTYGLGIYLLNNFIGFLSPQMDPESEGPLLPTNEREEYRPFARRLPEFKFWYQCAKATWVAFGMTFFDFFDVPVYWPILLLYFISLFVLTMKRQIRHMIKHRYVPWSNGKAKYAGGGEKR 180 ME+ G+ S VEQ VS QRKWQHILD+STV+VGLRWVIF ML LYA+RVFYINGWFIVTYGLGIYLLNNFIGFLSPQMDPESEGPLLPT E EEYRPFARRLPEFKFWYQCAKATW+AF MTFF+FFDVPVYWPILLLYF+SLF+LTMKRQIRHMIKHRYVPWSN KA+YAG GEKR Sbjct: 1 MEAGGESSVVEQFVVSWQRKWQHILDQSTVHVGLRWVIFAAMLTLYAVRVFYINGWFIVTYGLGIYLLNNFIGFLSPQMDPESEGPLLPTQESEEYRPFARRLPEFKFWYQCAKATWIAFTMTFFEFFDVPVYWPILLLYFVSLFILTMKRQIRHMIKHRYVPWSNSKARYAGAGEKR 178
BLAST of NO09G03030 vs. NCBI_GenBank
Match: OQS06120.1 (hypothetical protein THRCLA_01817 [Thraustotheca clavata]) HSP 1 Score: 233.4 bits (594), Expect = 5.600e-58 Identity = 108/172 (62.79%), Postives = 143/172 (83.14%), Query Frame = 0 Query: 7 DPSFVEQVAVSLQRKWQHILDRSTVYVGLRWVIFVVMLGLYALRVFYINGWFIVTYGLGIYLLNNFIGFLSPQMDPESEGPLLPTNEREEYRPFARRLPEFKFWYQCAKATWVAFGMTFFDFFDVPVYWPILLLYFISLFVLTMKRQIRHMIKHRYVPWSNGKAKYAGGGEK 179 +P+F+E+VA S+ RKWQH+LD+ST++V RWV+ +V+L +Y +RV IN + I+TYGLGIYLLN FIGFLSPQ+DPE+EGP+LP+++ EE+RPF+RR+PEFKFWY KAT+ A MTFF+ F++PV+WPILL+YFI LF LTMKRQI+HM KH YVPW++GK Y G +K Sbjct: 11 EPAFLERVASSVGRKWQHVLDQSTIHVTGRWVLSLVLLSIYLIRVLTINAFHIITYGLGIYLLNLFIGFLSPQIDPETEGPVLPSSKSEEFRPFSRRVPEFKFWYATTKATFYALCMTFFEIFNIPVFWPILLMYFIVLFTLTMKRQIKHMWKHNYVPWNHGKQVYKGKPQK 182
BLAST of NO09G03030 vs. NCBI_GenBank
Match: XP_009829060.1 (hypothetical protein H257_05786 [Aphanomyces astaci] >ETV81202.1 hypothetical protein H257_05786 [Aphanomyces astaci]) HSP 1 Score: 232.6 bits (592), Expect = 9.500e-58 Identity = 109/172 (63.37%), Postives = 139/172 (80.81%), Query Frame = 0 Query: 7 DPSFVEQVAVSLQRKWQHILDRSTVYVGLRWVIFVVMLGLYALRVFYINGWFIVTYGLGIYLLNNFIGFLSPQMDPESEGPLLPTNEREEYRPFARRLPEFKFWYQCAKATWVAFGMTFFDFFDVPVYWPILLLYFISLFVLTMKRQIRHMIKHRYVPWSNGKAKYAGGGEK 179 +P+F+E+V S RKWQH+LD+ST+YV RW+ V+L Y +RV+Y+N + I+TYGLGIYLLN FIGFLSPQ+DPE+EGP+LP+ EE+RPF+RR+PEFKFWY KAT++A +TFF+ F+VPV+WPILL+YFI LF LTMKRQI+HM KH YVPWS+GK Y G G K Sbjct: 17 EPAFLERVFASFGRKWQHVLDQSTIYVYGRWIASAVLLTSYIVRVYYLNAFHIITYGLGIYLLNLFIGFLSPQIDPETEGPVLPSTNSEEFRPFSRRVPEFKFWYTSTKATFMATLLTFFEVFNVPVFWPILLMYFILLFTLTMKRQIKHMWKHNYVPWSSGKQVYKGKGGK 188
BLAST of NO09G03030 vs. NCBI_GenBank
Match: XP_012196064.1 (hypothetical protein SPRG_02123 [Saprolegnia parasitica CBS 223.65] >KDO33314.1 hypothetical protein SPRG_02123 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 228.8 bits (582), Expect = 1.400e-56 Identity = 108/172 (62.79%), Postives = 139/172 (80.81%), Query Frame = 0 Query: 7 DPSFVEQVAVSLQRKWQHILDRSTVYVGLRWVIFVVMLGLYALRVFYINGWFIVTYGLGIYLLNNFIGFLSPQMDPESEGPLLPTNEREEYRPFARRLPEFKFWYQCAKATWVAFGMTFFDFFDVPVYWPILLLYFISLFVLTMKRQIRHMIKHRYVPWSNGKAKYAGGGEK 179 +P F+E+VA S+ RKWQH+LD+ST++V RWV V+L +Y RV IN + I+TYGLGIYLLN FIGFLSPQ+DPE+EGP+LP+++ EE+RPF+RR+PEFKFWY KAT+ A MTFF+ F++PV+WPILL+YFI LF LTMKRQI+HM KH YVPW++GK Y G +K Sbjct: 17 EPVFLERVAASVGRKWQHVLDQSTIHVTGRWVFSAVLLVVYLARVLTINSFHIITYGLGIYLLNLFIGFLSPQIDPETEGPVLPSSKSEEFRPFSRRVPEFKFWYATTKATFYALLMTFFEIFNIPVFWPILLMYFIVLFTLTMKRQIKHMWKHNYVPWNHGKQVYKGKPQK 188
BLAST of NO09G03030 vs. NCBI_GenBank
Match: XP_008615130.1 (hypothetical protein SDRG_10892 [Saprolegnia diclina VS20] >EQC31289.1 hypothetical protein SDRG_10892 [Saprolegnia diclina VS20]) HSP 1 Score: 227.3 bits (578), Expect = 4.000e-56 Identity = 106/172 (61.63%), Postives = 139/172 (80.81%), Query Frame = 0 Query: 7 DPSFVEQVAVSLQRKWQHILDRSTVYVGLRWVIFVVMLGLYALRVFYINGWFIVTYGLGIYLLNNFIGFLSPQMDPESEGPLLPTNEREEYRPFARRLPEFKFWYQCAKATWVAFGMTFFDFFDVPVYWPILLLYFISLFVLTMKRQIRHMIKHRYVPWSNGKAKYAGGGEK 179 +P F+E+VA S+ RKWQH+LD+ST++V RWV V+L +Y RV +N + I+TYGLGIYLLN FIGFLSPQ+DPE++GP+LP+++ EE+RPF+RR+PEFKFWY KAT+ A MTFF+ F++PV+WPILL+YFI LF LTMKRQI+HM KH YVPW++GK Y G +K Sbjct: 18 EPVFLERVAASVGRKWQHVLDQSTIHVTGRWVFSAVLLVVYLARVLTLNSFHIITYGLGIYLLNLFIGFLSPQIDPETDGPVLPSSKSEEFRPFSRRVPEFKFWYATTKATFYALFMTFFEIFNIPVFWPILLMYFIVLFTLTMKRQIKHMWKHNYVPWNHGKQVYKGKPQK 189
BLAST of NO09G03030 vs. NCBI_GenBank
Match: XP_002897246.1 (protein RER1A [Phytophthora infestans T30-4] >EEY65383.1 protein RER1A [Phytophthora infestans T30-4]) HSP 1 Score: 221.9 bits (564), Expect = 1.700e-54 Identity = 107/168 (63.69%), Postives = 133/168 (79.17%), Query Frame = 0 Query: 7 DPSFVEQVAVSLQRKWQHILDRSTVYVGLRWVIFVVMLGLYALRVFYINGWFIVTYGLGIYLLNNFIGFLSPQMDPESEGPLLPTNEREEYRPFARRLPEFKFWYQCAKATWVAFGMTFFDFFDVPVYWPILLLYFISLFVLTMKRQIRHMIKHRYVPWSNGKAKYAG 175 +P F+ +V+VS++RKWQH+LD+ST++V RW + + +L LY +RVFY+N + IVTYGLGIYLLN FIGFLSPQMD ES+GPLLP + EE+RPF RR+PEF+FWY KAT V+ MT FDVPV+WPILL+YFI LF LTMKRQI+HM KH YVPW +GK Y G Sbjct: 11 EPPFIARVSVSIKRKWQHLLDKSTIHVYGRWGVALGLLLLYLVRVFYLNAFHIVTYGLGIYLLNLFIGFLSPQMDAESDGPLLPHKQSEEFRPFTRRVPEFQFWYSTFKATIVSLLMTLSSAFDVPVFWPILLIYFIVLFALTMKRQIKHMWKHNYVPWDHGKQVYKG 178
BLAST of NO09G03030 vs. NCBI_GenBank
Match: CCI43054.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 221.9 bits (564), Expect = 1.700e-54 Identity = 104/172 (60.47%), Postives = 132/172 (76.74%), Query Frame = 0 Query: 7 DPSFVEQVAVSLQRKWQHILDRSTVYVGLRWVIFVVMLGLYALRVFYINGWFIVTYGLGIYLLNNFIGFLSPQMDPESEGPLLPTNEREEYRPFARRLPEFKFWYQCAKATWVAFGMTFFDFFDVPVYWPILLLYFISLFVLTMKRQIRHMIKHRYVPWSNGKAKYAGGGEK 179 +P F+ +V S+ RKWQH+LDRST+YV RW ++L YA+RV Y+N + IVTYGLGIYLLN FIGFLSPQ+D E EGPLLP+ + EE+RPF R++PEF+FWY AKAT+V+ +TF FD+PV+WP+LL+YFI LF +TMKRQI+HM KH YVPW+ GK Y G K Sbjct: 425 EPPFIGRVTASIGRKWQHLLDRSTIYVSARWTFAFILLATYAIRVLYLNAFHIVTYGLGIYLLNMFIGFLSPQID-EYEGPLLPSRQSEEFRPFTRKVPEFQFWYSVAKATFVSLLLTFNSTFDIPVFWPVLLIYFIILFAMTMKRQIKHMWKHNYVPWNRGKKVYGKGSGK 595
BLAST of NO09G03030 vs. NCBI_GenBank
Match: CCI43055.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 221.9 bits (564), Expect = 1.700e-54 Identity = 104/172 (60.47%), Postives = 132/172 (76.74%), Query Frame = 0 Query: 7 DPSFVEQVAVSLQRKWQHILDRSTVYVGLRWVIFVVMLGLYALRVFYINGWFIVTYGLGIYLLNNFIGFLSPQMDPESEGPLLPTNEREEYRPFARRLPEFKFWYQCAKATWVAFGMTFFDFFDVPVYWPILLLYFISLFVLTMKRQIRHMIKHRYVPWSNGKAKYAGGGEK 179 +P F+ +V S+ RKWQH+LDRST+YV RW ++L YA+RV Y+N + IVTYGLGIYLLN FIGFLSPQ+D E EGPLLP+ + EE+RPF R++PEF+FWY AKAT+V+ +TF FD+PV+WP+LL+YFI LF +TMKRQI+HM KH YVPW+ GK Y G K Sbjct: 423 EPPFIGRVTASIGRKWQHLLDRSTIYVSARWTFAFILLATYAIRVLYLNAFHIVTYGLGIYLLNMFIGFLSPQID-EYEGPLLPSRQSEEFRPFTRKVPEFQFWYSVAKATFVSLLLTFNSTFDIPVFWPVLLIYFIILFAMTMKRQIKHMWKHNYVPWNRGKKVYGKGSGK 593
BLAST of NO09G03030 vs. NCBI_GenBank
Match: XP_008913996.1 (hypothetical protein PPTG_17875 [Phytophthora parasitica INRA-310] >ETI33388.1 hypothetical protein F443_19933 [Phytophthora parasitica P1569] >ETK73710.1 hypothetical protein L915_19391 [Phytophthora parasitica] >ETL27143.1 hypothetical protein L916_19284 [Phytophthora parasitica] >ETL80393.1 hypothetical protein L917_19116 [Phytophthora parasitica] >ETM33618.1 hypothetical protein L914_19167 [Phytophthora parasitica] >ETN00675.1 hypothetical protein PPTG_17875 [Phytophthora parasitica INRA-310] >ETO62149.1 hypothetical protein F444_19923 [Phytophthora parasitica P1976] >ETP03225.1 hypothetical protein F441_19792 [Phytophthora parasitica CJ01A1] >ETP31400.1 hypothetical protein F442_19742 [Phytophthora parasitica P10297]) HSP 1 Score: 220.7 bits (561), Expect = 3.700e-54 Identity = 106/168 (63.10%), Postives = 133/168 (79.17%), Query Frame = 0 Query: 7 DPSFVEQVAVSLQRKWQHILDRSTVYVGLRWVIFVVMLGLYALRVFYINGWFIVTYGLGIYLLNNFIGFLSPQMDPESEGPLLPTNEREEYRPFARRLPEFKFWYQCAKATWVAFGMTFFDFFDVPVYWPILLLYFISLFVLTMKRQIRHMIKHRYVPWSNGKAKYAG 175 +P F+ +V+VS++RKWQ++LD+ST++V RW + + +L LY +RVFY+N + IVTYGLGIYLLN FIGFLSPQMD ES+GPLLP + EE+RPF RR+PEF+FWY KAT V+ MT FDVPV+WPILL+YFI LF LTMKRQI+HM KH YVPW +GK Y G Sbjct: 11 EPPFIARVSVSIKRKWQYLLDKSTIHVYGRWGVALGLLALYLVRVFYLNAFHIVTYGLGIYLLNLFIGFLSPQMDMESDGPLLPHKQSEEFRPFTRRVPEFQFWYSTFKATIVSLLMTLSSAFDVPVFWPILLIYFIVLFALTMKRQIKHMWKHNYVPWDHGKQVYKG 178 The following BLAST results are available for this feature:
BLAST of NO09G03030 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO09G03030 ID=NO09G03030|Name=NO09G03030|organism=Nannochloropsis oceanica|type=gene|length=2020bpback to top protein sequence of NO09G03030.1 >NO09G03030.1-protein ID=NO09G03030.1-protein|Name=NO09G03030.1|organism=Nannochloropsis oceanica|type=polypeptide|length=184bpback to top Synonyms
Publications
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