NO09G02960, NO09G02960 (gene) Nannochloropsis oceanica

Overview
NameNO09G02960
Unique NameNO09G02960
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1840
Alignment locationchr9:871967..873806 -

Link to JBrowse

Properties
Property NameValue
Descriptionhomolog of X-ray repair cross complementing 2 (XRCC2)
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:871967..873806 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
GO:0000724double-strand break repair via homologous recombination
GO:0006281DNA repair
GO:0000724double-strand break repair via homologous recombination
Vocabulary: Cellular Component
TermDefinition
GO:0005657replication fork
GO:0033063Rad51B-Rad51C-Rad51D-XRCC2 complex
GO:0033063Rad51B-Rad51C-Rad51D-XRCC2 complex
GO:0005657replication fork
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR030547XRCC2
Homology
BLAST of NO09G02960 vs. NCBI_GenBank
Match: EWM27499.1 (hypothetical protein Naga_100099g2 [Nannochloropsis gaditana])

HSP 1 Score: 382.5 bits (981), Expect = 1.800e-102
Identity = 213/351 (60.68%), Postives = 250/351 (71.23%), Query Frame = 0
Query:   14 AENGVELTISTLGCAAAPVFRTATLEDCRVGVTFLDSLAPKGEMSGQRGNAARLGGARGEGGGGGLIPGTVLELYGASGSGKTEVALNAVCGWVLPKALGGVGGVAVIVDLDFRVDVRRLRCLLLARIRRALATAGGGAVEGRDNGLQNGQPTHRKCHQSNKNDKETAHPSSFSTATAFTASQ----------------------YLTAALHQIVLARCMDELEAFSVLETLKFDLDKGPGAGVPTLLVLDSLGSLFYERKAAESCQQGQTCFDFMVARCVGRMATARAVAVVACKPALFAGARTVHHGGREMEGGREGGRDGYLYLGLEHKEYMPGQWSKLVTHRMTLVK 343
            A+   EL+ISTLGCAA P+FRTA    CRV V FLD+LAP  ++ G  G     G AR +G GGGL+PGTVLELYGASGSGKTEVALNAVCGWVLP+   GVGGVAV+VD+DFRVDVRRLRCLLL RIR+AL    GG  E R       Q T RK    +  + ET++    S    F A+                       +  AA+ Q+VL RC+D+LEAFSVLETLK+DLD+G GAG PTL+VLDSLGS FYERKAAESC QGQ+CFD+M+ARC+GRMA ++AV+V+ACKPALFAG RTVH GG+  EGG+E G   Y Y GLEHKEYMPGQWS+LVTHR+TLVK
Sbjct:    7 ADEPEELSISTLGCAAGPIFRTAATGSCRVNVPFLDTLAPITKV-GVAGEGLPQGRAREDGKGGGLLPGTVLELYGASGSGKTEVALNAVCGWVLPRKFSGVGGVAVVVDMDFRVDVRRLRCLLLGRIRKALQLGQGGWDERR-------QGTKRKW---SNGESETSYGQGISGNNGFRATTMGSIGTPDSAGACQGGEDTPFVWTQAAMDQVVLVRCVDDLEAFSVLETLKYDLDRGEGAGTPTLVVLDSLGSCFYERKAAESCHQGQSCFDYMIARCIGRMAQSQAVSVIACKPALFAGQRTVHEGGK--EGGKEEGNGRYRYPGLEHKEYMPGQWSRLVTHRLTLVK 344          
BLAST of NO09G02960 vs. NCBI_GenBank
Match: EOA13529.1 (hypothetical protein CARUB_v10026593mg [Capsella rubella] >EOA13530.1 hypothetical protein CARUB_v10026593mg [Capsella rubella])

HSP 1 Score: 77.0 bits (188), Expect = 1.600e-10
Identity = 66/276 (23.91%), Postives = 120/276 (43.48%), Query Frame = 0
Query:   82 GTVLELYGASGSGKTEVALNAVCGWVLPKA-----LGGVGGVAVIVDLDFRVDVRRLRCLLLARIRRALATAGGGAVEGRDNGLQNGQPTHRKCHQSNKNDKETAHPSSFSTATAFTASQYLTAALHQIVLARCMDELEAFSVLETLKFDLDKGPGAGVPT-LLVLDSLGSLFYERKAAESCQQGQ--------TCFDFMVARCVGRMATARAVAVVACKPALFAGARTVHHGGREMEGGRE-GGRDGYLYLGLEHKEYMPGQWSKLVTHRMTLVK 343
            G V+E+ GAS + KT++ + A    +LPK       GG+G + + +DLD R DV RL  +L  R+ +A     G   +  ++ ++N +  H K +                  TAF    Y+ + + + +  RC D LE  S L+TL + + +    G    +L++DS+G+  +  + + S   G         T     +   + ++  A ++ V+A K  ++      +   R+     E  G           +E+MP  W   VTH++ + K
Sbjct:   80 GNVVEVTGASPAAKTQILIQAAISCILPKTWNGIHYGGLGKLVLFLDLDCRFDVLRLSQMLKHRLLQANRLGNGAWWQLEESNVRNCRSAHEKSN------------------TAFDEELYV-SCMRRFLYVRCYDSLELLSCLKTLHYRIRQQESCGSQVGVLMIDSIGAFHWTDRLSSSLAMGSHNRKSLSLTNVVETIVLEIKKLLQAHSLVVIATKALIYEEKYPTNENNRKFSSNDELSGNAAIKAQQPPFREFMPSSWQAFVTHKIIIRK 336          
BLAST of NO09G02960 vs. NCBI_GenBank
Match: XP_023643103.1 (DNA repair protein XRCC2 homolog isoform X1 [Capsella rubella])

HSP 1 Score: 77.0 bits (188), Expect = 1.600e-10
Identity = 66/276 (23.91%), Postives = 120/276 (43.48%), Query Frame = 0
Query:   82 GTVLELYGASGSGKTEVALNAVCGWVLPKA-----LGGVGGVAVIVDLDFRVDVRRLRCLLLARIRRALATAGGGAVEGRDNGLQNGQPTHRKCHQSNKNDKETAHPSSFSTATAFTASQYLTAALHQIVLARCMDELEAFSVLETLKFDLDKGPGAGVPT-LLVLDSLGSLFYERKAAESCQQGQ--------TCFDFMVARCVGRMATARAVAVVACKPALFAGARTVHHGGREMEGGRE-GGRDGYLYLGLEHKEYMPGQWSKLVTHRMTLVK 343
            G V+E+ GAS + KT++ + A    +LPK       GG+G + + +DLD R DV RL  +L  R+ +A     G   +  ++ ++N +  H K +                  TAF    Y+ + + + +  RC D LE  S L+TL + + +    G    +L++DS+G+  +  + + S   G         T     +   + ++  A ++ V+A K  ++      +   R+     E  G           +E+MP  W   VTH++ + K
Sbjct:   45 GNVVEVTGASPAAKTQILIQAAISCILPKTWNGIHYGGLGKLVLFLDLDCRFDVLRLSQMLKHRLLQANRLGNGAWWQLEESNVRNCRSAHEKSN------------------TAFDEELYV-SCMRRFLYVRCYDSLELLSCLKTLHYRIRQQESCGSQVGVLMIDSIGAFHWTDRLSSSLAMGSHNRKSLSLTNVVETIVLEIKKLLQAHSLVVIATKALIYEEKYPTNENNRKFSSNDELSGNAAIKAQQPPFREFMPSSWQAFVTHKIIIRK 301          
BLAST of NO09G02960 vs. NCBI_GenBank
Match: XP_006280631.2 (DNA repair protein XRCC2 homolog isoform X2 [Capsella rubella] >XP_023643111.1 DNA repair protein XRCC2 homolog isoform X2 [Capsella rubella] >XP_023643117.1 DNA repair protein XRCC2 homolog isoform X2 [Capsella rubella] >XP_006280632.2 DNA repair protein XRCC2 homolog isoform X2 [Capsella rubella])

HSP 1 Score: 77.0 bits (188), Expect = 1.600e-10
Identity = 66/276 (23.91%), Postives = 120/276 (43.48%), Query Frame = 0
Query:   82 GTVLELYGASGSGKTEVALNAVCGWVLPKA-----LGGVGGVAVIVDLDFRVDVRRLRCLLLARIRRALATAGGGAVEGRDNGLQNGQPTHRKCHQSNKNDKETAHPSSFSTATAFTASQYLTAALHQIVLARCMDELEAFSVLETLKFDLDKGPGAGVPT-LLVLDSLGSLFYERKAAESCQQGQ--------TCFDFMVARCVGRMATARAVAVVACKPALFAGARTVHHGGREMEGGRE-GGRDGYLYLGLEHKEYMPGQWSKLVTHRMTLVK 343
            G V+E+ GAS + KT++ + A    +LPK       GG+G + + +DLD R DV RL  +L  R+ +A     G   +  ++ ++N +  H K +                  TAF    Y+ + + + +  RC D LE  S L+TL + + +    G    +L++DS+G+  +  + + S   G         T     +   + ++  A ++ V+A K  ++      +   R+     E  G           +E+MP  W   VTH++ + K
Sbjct:   45 GNVVEVTGASPAAKTQILIQAAISCILPKTWNGIHYGGLGKLVLFLDLDCRFDVLRLSQMLKHRLLQANRLGNGAWWQLEESNVRNCRSAHEKSN------------------TAFDEELYV-SCMRRFLYVRCYDSLELLSCLKTLHYRIRQQESCGSQVGVLMIDSIGAFHWTDRLSSSLAMGSHNRKSLSLTNVVETIVLEIKKLLQAHSLVVIATKALIYEEKYPTNENNRKFSSNDELSGNAAIKAQQPPFREFMPSSWQAFVTHKIIIRK 301          
BLAST of NO09G02960 vs. NCBI_GenBank
Match: GAQ89378.1 (DNA recombination and repair protein [Klebsormidium nitens])

HSP 1 Score: 75.9 bits (185), Expect = 3.500e-10
Identity = 78/285 (27.37%), Postives = 110/285 (38.60%), Query Frame = 0
Query:   81 PGTVLELYGASGSGKTEVALNAVCGWVLPKAL-----GGVGGVAVIVDLDFRVDVRRLRCLLLARIRRALATAGGGAVEGRDNGLQNGQPTHRKCHQSNKNDKETAHPSSFSTATAFTASQYLTAALHQIVLARCMDELEAFSVLETLKFDLD---KGPGAGVPTLLVLDSLGSLFYERK-----AAESCQQGQTCFDFMVARCVGRMATARAVAVVACKPAL--------FAGARTVHHGGREMEGGREGGRDGYLYLG----LEHKEYMPGQWSKLVTHRMTL 341
            PG V+E++GASGSGKTE+   AV   +LP  +     GG GG A+  DLD R D+ RL  +L +RI  A    GGG                                       A   SQ  TA+L +  L  C +     + L+ L+ ++    +  G     L+ +DS+G+  +  K     A       Q+     V   +  +       ++A K A+        +    T   G    EG R    D    L     L HKEYMP  W   VTHR+ L
Sbjct:   48 PGNVVEIFGASGSGKTEILTQAVATCILPSEVDGVGYGGAGGAALFFDLDGRFDILRLVRILESRINEAQVAQGGG--------------------------------------DADALSQVFTASLRRFRLLHCHNSFHLLAALKMLQPEIRQIVQNHGPDSLHLICIDSIGAFHWLDKGLHLWAGHRDALTQSGLSKAVVTELKHIMKRHRPLMLATKSAIGAPNRWRPYGSGSTTASGRSPQEGARGSHEDEDPELPQKAVLYHKEYMPAVWQDFVTHRLVL 294          
BLAST of NO09G02960 vs. NCBI_GenBank
Match: XP_013763049.1 (hypothetical protein AMSG_00187 [Thecamonas trahens ATCC 50062] >KNC46069.1 hypothetical protein AMSG_00187 [Thecamonas trahens ATCC 50062])

HSP 1 Score: 75.1 bits (183), Expect = 6.000e-10
Identity = 79/272 (29.04%), Postives = 110/272 (40.44%), Query Frame = 0
Query:   79 LIPGTVLELYGASGSGKTEVALNAVCGWVLPKALGGV-----GGVAVIVDLDFRVDVRRLRCLLLARIRRALATAGGGAVEGRDNGLQNGQPTHRKCHQSNKNDKETAHPSSFSTATAFTASQYLTAALHQIVLARCMD----ELEAFSVLETLKFDLDKGPGAGVPTLLVLDSLGSLFYERKAAESCQQGQTCFDFMVARCVGR-MATARAVAVVACKPALFAGARTVHHGGREMEGGREGGRDGYLYLGLEHKEYMPGQWSKLVTHRMTL 341
            L+ G+VLE+YG +GSGKT++  N +C  V+P+A  GV     G  A +VD   +   R L  +L AR   ALA AG   +                                   ATAF A     A L  +V+ R       EL   ++L  +  +     GA    L+ LD +   F++ +A      G    +  + R V   +A +R + VVA KPALFA A                          +H EYMP  W  LVTHR+ L
Sbjct:   51 LVGGSVLEVYGEAGSGKTQLVYNMLCAVVMPEAWDGVPMHGRGERAAVVDTSLKFKTRVLARMLAARFELALADAGREPLP--------------------------------DEATAFAA-----ACLGHLVIYRPRSAGELELTLAALLTGVTDEPPAAQGALPLALVALDDVAPFFWQGRAG---VDGAARVNESLHRWVAALLAASRVLVVVAVKPALFAPADEA---------------------ATQHSEYMPRGWQALVTHRLVL 261          
BLAST of NO09G02960 vs. NCBI_GenBank
Match: XP_010461923.1 (PREDICTED: DNA repair protein XRCC2 homolog isoform X1 [Camelina sativa])

HSP 1 Score: 71.2 bits (173), Expect = 8.600e-9
Identity = 71/274 (25.91%), Postives = 122/274 (44.53%), Query Frame = 0
Query:   82 GTVLELYGASGSGKTEVALNAVCGWVLPKA-----LGGVGGVAVIVDLDFRVDVRRLRCLLLARIRRALATAGGGAVEGRDNGLQNGQPTHRKCHQSNKNDKETAHPSSFSTATAFTASQYLTAALHQIVLARCMDELEAFSVLETLKFDLDKGPGAGVPT-LLVLDSLGSLFYERK-----AAESCQQGQTCFDFMVARCVGRM---ATARAVAVVACKPALFAGARTVHHGGREMEGGRE-GGRDGYLYLGLEHKEYMPGQWSKLVTHRMTL 341
            G V+E+ GAS S KT++ + A    +LPK       GG+G + + +DLD R DV RL  +L  R+ +A             N + NG  T  +  +SN  D  +AH  S    T+F    Y+ + + + +  RC D LE  S L+TL + + +    G    +L++DS+G+  +  +     A E+  +       +V   V  M       ++ V+A K  ++      +   R+     +  G        +  +E+MP  W   VTH++ +
Sbjct:   43 GNVVEVTGASPSAKTQILIQAAITCILPKTWNGIHYGGLGKLVLFLDLDCRFDVLRLSQMLKHRLLQA-------------NRIGNG--TWWQLEESNVRDCRSAHEKS---KTSFDEELYV-SCMKRFLYVRCYDSLELLSCLKTLDYRIRQQESCGSQVGVLMIDSIGAFHWTDRLSSLLALETHNRKSLSLTNVVETIVQEMKKLLQVHSLVVIATKATIYEEKYPTNENNRKFSLNDDLSGNVASKAQQIPFREFMPSSWQAFVTHKLII 297          
BLAST of NO09G02960 vs. NCBI_GenBank
Match: XP_010461929.1 (PREDICTED: DNA repair protein XRCC2 homolog isoform X2 [Camelina sativa])

HSP 1 Score: 71.2 bits (173), Expect = 8.600e-9
Identity = 71/274 (25.91%), Postives = 122/274 (44.53%), Query Frame = 0
Query:   82 GTVLELYGASGSGKTEVALNAVCGWVLPKA-----LGGVGGVAVIVDLDFRVDVRRLRCLLLARIRRALATAGGGAVEGRDNGLQNGQPTHRKCHQSNKNDKETAHPSSFSTATAFTASQYLTAALHQIVLARCMDELEAFSVLETLKFDLDKGPGAGVPT-LLVLDSLGSLFYERK-----AAESCQQGQTCFDFMVARCVGRM---ATARAVAVVACKPALFAGARTVHHGGREMEGGRE-GGRDGYLYLGLEHKEYMPGQWSKLVTHRMTL 341
            G V+E+ GAS S KT++ + A    +LPK       GG+G + + +DLD R DV RL  +L  R+ +A             N + NG  T  +  +SN  D  +AH  S    T+F    Y+ + + + +  RC D LE  S L+TL + + +    G    +L++DS+G+  +  +     A E+  +       +V   V  M       ++ V+A K  ++      +   R+     +  G        +  +E+MP  W   VTH++ +
Sbjct:   43 GNVVEVTGASPSAKTQILIQAAITCILPKTWNGIHYGGLGKLVLFLDLDCRFDVLRLSQMLKHRLLQA-------------NRIGNG--TWWQLEESNVRDCRSAHEKS---KTSFDEELYV-SCMKRFLYVRCYDSLELLSCLKTLDYRIRQQESCGSQVGVLMIDSIGAFHWTDRLSSLLALETHNRKSLSLTNVVETIVQEMKKLLQVHSLVVIATKATIYEEKYPTNENNRKFSLNDDLSGNVASKAQQIPFREFMPSSWQAFVTHKLII 297          
BLAST of NO09G02960 vs. NCBI_GenBank
Match: XP_010461935.1 (PREDICTED: DNA repair protein XRCC2 homolog isoform X3 [Camelina sativa])

HSP 1 Score: 71.2 bits (173), Expect = 8.600e-9
Identity = 71/274 (25.91%), Postives = 122/274 (44.53%), Query Frame = 0
Query:   82 GTVLELYGASGSGKTEVALNAVCGWVLPKA-----LGGVGGVAVIVDLDFRVDVRRLRCLLLARIRRALATAGGGAVEGRDNGLQNGQPTHRKCHQSNKNDKETAHPSSFSTATAFTASQYLTAALHQIVLARCMDELEAFSVLETLKFDLDKGPGAGVPT-LLVLDSLGSLFYERK-----AAESCQQGQTCFDFMVARCVGRM---ATARAVAVVACKPALFAGARTVHHGGREMEGGRE-GGRDGYLYLGLEHKEYMPGQWSKLVTHRMTL 341
            G V+E+ GAS S KT++ + A    +LPK       GG+G + + +DLD R DV RL  +L  R+ +A             N + NG  T  +  +SN  D  +AH  S    T+F    Y+ + + + +  RC D LE  S L+TL + + +    G    +L++DS+G+  +  +     A E+  +       +V   V  M       ++ V+A K  ++      +   R+     +  G        +  +E+MP  W   VTH++ +
Sbjct:   43 GNVVEVTGASPSAKTQILIQAAITCILPKTWNGIHYGGLGKLVLFLDLDCRFDVLRLSQMLKHRLLQA-------------NRIGNG--TWWQLEESNVRDCRSAHEKS---KTSFDEELYV-SCMKRFLYVRCYDSLELLSCLKTLDYRIRQQESCGSQVGVLMIDSIGAFHWTDRLSSLLALETHNRKSLSLTNVVETIVQEMKKLLQVHSLVVIATKATIYEEKYPTNENNRKFSLNDDLSGNVASKAQQIPFREFMPSSWQAFVTHKLII 297          
BLAST of NO09G02960 vs. NCBI_GenBank
Match: BAT91071.1 (hypothetical protein VIGAN_06237700 [Vigna angularis var. angularis])

HSP 1 Score: 70.9 bits (172), Expect = 1.100e-8
Identity = 68/269 (25.28%), Postives = 107/269 (39.78%), Query Frame = 0
Query:   82 GTVLELYGASGSGKTEVALNAVCGWVLPKALGGVGGVAVIVDLDFRVDVRRLRCLLLARIRRALATAGGGAVEGRDNGLQNGQPTHRKCHQSNKNDKETAHPSSFSTATAFTASQYLTAALHQIVLARCMDELEAFSVLETLKFDLDKG---PGAGVPTLLVLDSLGSLFYERKAAESCQQGQTCFDFMVARCVGRMATARAVAVVACKPALFAGARTVHHGGR------EMEGGREGGRDGYL---YLGLEHKEYMPGQWSKLVTHRM 339
            G VLEL G S S KT++ +NA    VLPK  GG+  + + +DLD R D+ R   LL+ RI +                           H ++  D+   H                   + + +  RC D  E    L TL   L+K     G GV  L++ DS+G+  +  +A+    Q +T    +  + V          ++   P L    ++V  G R      E++G  E      +   +   +++EYMP  W   VTHR+
Sbjct:   46 GNVLELVGPSPSAKTQILINAAITSVLPKPYGGLDHLVLFLDLDCRFDITRFSQLLIHRITQ---------------------------HGTDSYDQALYH-----------------LCMARFLYVRCYDSFEFLHTLRTLHCRLEKEKEVQGVGVHVLMI-DSIGAFHWMDRASMFLSQRETSKKKLFLQTVSEAVVQNIKKLLQVHPMLIMATKSVIFGNRYSTASNEVKGNMEERCSKNMTRNHQNFQYREYMPSVWQSFVTHRI 269          
The following BLAST results are available for this feature:
BLAST of NO09G02960 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27499.11.800e-10260.68hypothetical protein Naga_100099g2 [Nannochloropsi... [more]
EOA13529.11.600e-1023.91hypothetical protein CARUB_v10026593mg [Capsella r... [more]
XP_023643103.11.600e-1023.91DNA repair protein XRCC2 homolog isoform X1 [Capse... [more]
XP_006280631.21.600e-1023.91DNA repair protein XRCC2 homolog isoform X2 [Capse... [more]
GAQ89378.13.500e-1027.37DNA recombination and repair protein [Klebsormidiu... [more]
XP_013763049.16.000e-1029.04hypothetical protein AMSG_00187 [Thecamonas trahen... [more]
XP_010461923.18.600e-925.91PREDICTED: DNA repair protein XRCC2 homolog isofor... [more]
XP_010461929.18.600e-925.91PREDICTED: DNA repair protein XRCC2 homolog isofor... [more]
XP_010461935.18.600e-925.91PREDICTED: DNA repair protein XRCC2 homolog isofor... [more]
BAT91071.11.100e-825.28hypothetical protein VIGAN_06237700 [Vigna angular... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL120nonsL120Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR021ncniR021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010830NSK010830Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G02960.1NO09G02960.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|670659gene_4251Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100099g2gene3053Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G02960.1NO09G02960.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G02960 ID=NO09G02960|Name=NO09G02960|organism=Nannochloropsis oceanica|type=gene|length=1840bp
AAAAACAAAAAAACATACATACAGGCGTGCTTGTTCCGTGCGCGAGGAAG
CGGCAGCGCGCGTTCAAACCTCGCGAGATGTTGCTCCAACAAACAGCTGG
AGGAGGAGACAAAGGAGCGGAAAATGGGGTGGAGTTGACTATTTCGACCT
TAGGGTGTGCAGCGGCACCCGTCTTTCGCACCGCTACCTTGGAGGACTGC
CGTGTAGGCGTGACATTTCTTGATTCCCTGGCCCCAAAGGGAGAAATGAG
CGGCCAGAGAGGAAATGCTGCGCGGCTAGGAGGTGCACGGGGAGAAGGAG
GAGGAGGAGGGCTGATTCCGGGGACGGTGCTGGAGCTGTACGGCGCATCG
GGGAGCGGCAAGACCGAAGTGGCACTCAATGCCGTGTGTGGTTGGGTGCT
GCCCAAGGCGTTAGGAGGGGTGGGAGGCGTTGCTGTGATCGTGGATCTGG
ACTTCCGGGTGGATGTGCGCCGGTTGCGGTGCTTGCTCTTAGCTCGTATC
CGACGGGCCTTGGCAACAGCAGGAGGAGGAGCCGTTGAAGGACGAGATAA
TGGACTGCAGAATGGACAGCCAACACATCGAAAATGCCATCAAAGCAACA
AGAACGATAAAGAAACTGCACATCCCTCCTCTTTCTCAACCGCCACCGCA
TTCACAGCTTCCCAATACCTAACCGCGGCCCTCCACCAAATCGTCCTCGC
CCGGTGCATGGACGAGCTCGAAGCCTTCTCCGTCCTAGAAACCCTCAAAT
TTGATCTTGACAAAGGTCCAGGCGCTGGTGTCCCAACCCTTCTCGTTCTG
GACAGTCTGGGGTCGTTATTTTATGAAAGAAAAGCGGCGGAGAGCTGCCA
GCAAGGGCAAACCTGTTTTGATTTCATGGTTGCGCGGTGCGTGGGTCGAA
TGGCAACAGCGCGGGCAGTTGCTGTGGTGGCGTGCAAGCCTGCTTTGTTC
GCGGGGGCACGGACGGTGCACCATGGAGGGAGAGAGATGGAGGGAGGGAG
GGAGGGAGGGAGGGACGGGTACCTGTACCTCGGGCTTGAGCATAAGGAGT
ACATGCCAGGGCAGTGGTCTAAGCTGGTGACGCATCGGATGACGCTGGTG
AAGGAAGATGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGAGAAAGGGGGAGAGCAGTTTTCTCAGCGAGGGTGGTGTCGA
TGGGCATGGTGCCGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAATAC
CAGCAGCAGCAGCGACTGCTGCAGGGAGAAGGACGAGGAGGGGCAGTGGC
AGTGCATGCGTGGTTCCAGGTGGGAAAGGAGGGAGTACTAGCGTATGGCG
AAGGACAGGAAGGAGAGTGCCAGTAAAAGAGAGGGAGGGAATGGTAGAGG
GAGGGAGGGAGGGAGGGAGGAAGCAATGTACAGCCCTTTCTCCGTGTGGA
GCTAATAGGTATAAATGTACATGTTAATTACCAGCAATCGCATCGCCTAA
GCTAGTCCGCTCGAAGGGGGCGTGGGAGGAGAGAAGGGGCCTGAAAAGAA
GAAACCACAGAAAAGTATAAAACGAGTAAGAGAGGGGAAAAGGGTCATGA
AAGGAGCGCACACACCTTAAGGTAAGGTAAGAAAAGGTGGGGCTGTCGGC
CGGCTGCGAGGGTCCACAACAGAATGAAAATACGCGAGTTGAGATATCCA
ACAAAGGGAAAGGAATGGCAATGGCGATGGTTCTCTGCTGTCCCTCCTTC
TTCCCGCCTCGGTCCTTAGAATGTCGGTCGTATGCTGCGTCGTCAAAAAG
GGAGGAGGGGGAGGAGAGAAAGCAACTAACTAACGTCAGT
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protein sequence of NO09G02960.1

>NO09G02960.1-protein ID=NO09G02960.1-protein|Name=NO09G02960.1|organism=Nannochloropsis oceanica|type=polypeptide|length=433bp
MLLQQTAGGGDKGAENGVELTISTLGCAAAPVFRTATLEDCRVGVTFLDS
LAPKGEMSGQRGNAARLGGARGEGGGGGLIPGTVLELYGASGSGKTEVAL
NAVCGWVLPKALGGVGGVAVIVDLDFRVDVRRLRCLLLARIRRALATAGG
GAVEGRDNGLQNGQPTHRKCHQSNKNDKETAHPSSFSTATAFTASQYLTA
ALHQIVLARCMDELEAFSVLETLKFDLDKGPGAGVPTLLVLDSLGSLFYE
RKAAESCQQGQTCFDFMVARCVGRMATARAVAVVACKPALFAGARTVHHG
GREMEGGREGGRDGYLYLGLEHKEYMPGQWSKLVTHRMTLVKEDGGGGGG
GGGGGGGGGGGERGRAVFSARVVSMGMVPQQQQQQQQQQQYQQQQRLLQG
EGRGGAVAVHAWFQVGKEGVLAYGEGQEGECQ*
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