NO09G02750, NO09G02750 (gene) Nannochloropsis oceanica

Overview
NameNO09G02750
Unique NameNO09G02750
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1743
Alignment locationchr9:808326..810068 -

Link to JBrowse

Properties
Property NameValue
DescriptionZinc finger, CCCH-type
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:808326..810068 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
Homology
BLAST of NO09G02750 vs. NCBI_GenBank
Match: EWM27513.1 (Zinc finger, CCCH-type [Nannochloropsis gaditana])

HSP 1 Score: 501.9 bits (1291), Expect = 2.700e-138
Identity = 271/580 (46.72%), Postives = 335/580 (57.76%), Query Frame = 0
Query:    1 MGAFPRCRDHAEMAPFILSSSDLQSTFPSPPSSSPSXFXXXPSASSIPSI-QVKTLYTVRGRVCARRPFAKCMLFFDLVDAKTRNQTRGDLVIRLECLLHAKGLAGLERAHVKKIMHDVHMGDVLEVDGFLDTRQEFLVLEAKEFRVVEAWKSL-QENPRVGFVLEWPSASQEEMKIEAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLPPLLLENICKYWVANQGRCYQSKGGCPKFHPPLSQLPNYYTAWLAKRQKERAHASQIEGDTHPPEDKTNKALRAVLFADWLVQTYGATTLAEGSGVVDVAGGKGDVSCRLWGEYGIRCTIVDPRATNFRKKVQQQVVRQRGGMEGIGRLPCIMP------------AGCLENEXXXXXXXXXXXXXXXXXXXXXXLKECSLVVGMHPDQATDGIFEAALTYGKPVACVPCCVFAREFPHRRRPNMAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVESYEHLIEYLMAKPTPWPGVACQRKFLPFLGRNQVLFTLPPSLSSWTDGEEGGRE 567
            MG FPRC+ +AEM PF++ +S      P   S +PS      S+S++P +      + VRGRVC+RRPFAKCMLFFDLVD  T N TRGD +IRLECLL ++GLA L++A  K++M+DV MGD+LEV+G LDT +EFLVLEA+  RV+E+WK+L + NPR+GF LEWP+ +   +                                                                 +   LLE +CKYWVA QGRCY S  GCP +HPPL +   YY AWLAKR++ERA AS +EGD H PEDK+ KA RA+LFADWLV+TYG   LA GSGVVDVAGGKGDVSCRLWG+Y IRCTIVDPR T +RKKV++Q++RQ  G+EGI R+ C MP             G    +                      L+ CS+VVGMHPDQATD  F+AA  + KPVAC+PCCVFAREFPHRRRP                                        VE+YEHL+EYL+AKP PW     +R+FLPFLGRNQV++ LPP LS   + EE  RE
Sbjct:    1 MGVFPRCKIYAEMEPFVVVTSP-----PLEASIAPSL-----SSSTVPRVPPCDVKFIVRGRVCSRRPFAKCMLFFDLVDVSTTNGTRGDQIIRLECLLRSEGLAKLQKAEAKRLMYDVSMGDILEVEGCLDTSREFLVLEARALRVIESWKALHKHNPRLGFALEWPTETPNVVS----------------------------------------NGEHTLSVYTQDGCVLVNKEGSEEVIESLLEKVCKYWVATQGRCY-SANGCPNYHPPLERHAQYYAAWLAKRRRERARASHLEGDGHSPEDKSKKAFRAILFADWLVKTYGRERLAAGSGVVDVAGGKGDVSCRLWGKYQIRCTIVDPRETQYRKKVRRQLLRQGRGLEGIERVQCTMPTDFGRTDDTEGEGGMASLQGEGLRERQGPTTESQAERLWDILRRCSMVVGMHPDQATDVCFDAAFAFKKPVACLPCCVFAREFPHRRRPRRG------------------------GGGDGACPGQGEEVETYEHLVEYLLAKPVPWAQGQSKREFLPFLGRNQVVYWLPPGLSDGVEREERWRE 505          
BLAST of NO09G02750 vs. NCBI_GenBank
Match: GAY00983.1 (Hypothetical protein PINS_008838 [Pythium insidiosum])

HSP 1 Score: 169.9 bits (429), Expect = 2.400e-38
Identity = 136/489 (27.81%), Postives = 196/489 (40.08%), Query Frame = 0
Query:   65 RRPFAKCMLFFDLVDAKTRNQTRGDLVIRLECLLHAKGLAGLERAHVKKIMHDVHMGDVLEVDGFLDTRQEF--LVLEAKEFRVVEAWKSLQENPRVGFVLEWPSASQEEMKIEAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLPPLLLENI---CKYWVANQGRCYQSKGGCPKFHPPLSQLPNYYTAWLAKRQKERAHASQIEGDTHPPEDKTNKALRAVLFADWLVQTYGATTLAEGSGVVDVAGGKGDVSCRLWGEYGIRCTIVDPRATNFRKKVQQQVVRQRGGMEGIGRLPCIMPAGCLENEXXXXXXXXXXXXXXXXXXXXXXLKECSLVVGMHPDQATDGIFEAALTYGKPVACVPCCVFAREFPHRRRPNMAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVESYEHLIEYLMAKPTPWPGVACQRKFLPFLGRNQVLF 549
            RR   KC LF+DL    T     G+   RLE +L       L    V  I H V++GDV+ + GF++   E   ++L A++ R V  W+  +E+P V FV      S  E    +                                                            S  P ++ +    CK+W+    R  Q    C  +H    ++     AWL  R + +   +Q+  D   P  KTNK  RA +F +WLVQ +G   L+ G+GVVD+AGG+G+VS  LW + GIRCT++DPR      +VQ +  +++           I      E                        ++E S+++GMHPD+ATD I + AL Y KP A VPCCVF   FP RRRP+                                       V S++ L+EYL  K +     + QR +L F G+N VLF
Sbjct:    4 RRVSRKC-LFYDLASVAT-----GESDERLEVILKIID-DELSIEEVDSIRHRVNLGDVVHIHGFVERLPEAKRILLHARDIRPVRTWR--EEHPGVTFVPVPTVHSDRESNAASN----------------------------------------------------KAELDGVSSSPTVVSSTRQHCKFWI--NTRVCQFGDKCEFYHAAADEMREARAAWLENRLQLKRERAQLSEDPLDPHGKTNKVQRASVFVEWLVQXFGEALLSSGAGVVDIAGGRGNVSFELWNKRGIRCTLIDPRPMRL-SRVQYKFFKKQK----------IEKPAIPEALAPQRTALFNATTFLEDPANEQLIQEASVLIGMHPDEATDAIIDVALRYNKPFALVPCCVFGHAFPDRRRPD-----------------------------------GVSKVVSFDDLVEYLEHKHS-----SIQRDYLSFDGKNLVLF 378          
BLAST of NO09G02750 vs. NCBI_GenBank
Match: XP_009521425.1 (hypothetical protein PHYSODRAFT_481813 [Phytophthora sojae] >EGZ26137.1 hypothetical protein PHYSODRAFT_481813 [Phytophthora sojae])

HSP 1 Score: 167.9 bits (424), Expect = 9.100e-38
Identity = 103/304 (33.88%), Postives = 149/304 (49.01%), Query Frame = 0
Query:  246 NICKYWVANQGRCYQSKG-GCPKFHPPLSQLPNYYTAWLAKRQKERAHASQIEGDTHPPEDKTNKALRAVLFADWLVQTYGATTLAEGSGVVDVAGGKGDVSCRLWGEYGIRCTIVDPRATNFRKKVQQQVVRQRGGMEGIGRLPCIMPAGCLENEXXXXXXXXXXXXXXXXXXXXXXLKECSLVVGMHPDQATDGIFEAALTYGKPVACVPCCVFAREFPHRRRPNMAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVESYEHLIEYLMAKPTPWPGVACQRKFLPFLGRNQVLF 549
            N CKY+ ++ G     +G  C  +H            W+AKR ++RA A+ + GD+  P  K +KA R+ +F DWLV++ G   LA G+GV+DVAGGKGD+  +LW + GI  T++DPR      K  +++V +   ++G    P ++   CL+ E                        +CS++VGMHPD+AT+ I +AALT GKP A VPCCV +R FP R+                                          V++YE  + YL+ K    P V  QR FLPF GRN+VL+
Sbjct:  115 NACKYYFSSSGGANCLRGEQCHFWHGRPEDFKENRRRWMAKRLEQRAKAAHLAGDSGDPHSKIDKAQRSRIFCDWLVESLGEERLARGTGVIDVAGGKGDIPIQLWIQRGIPTTLIDPRPMKL-GKYNRKLVAKAEAVKGRKMSPQLL--RCLDAE--------------TLKLHTELFADCSVLVGMHPDEATEAIVDAALTLGKPFAIVPCCVMSRVFPDRK------------------------------------CRDGTPVDTYETFVRYLLEK---HPSV--QRAFLPFAGRNKVLY 360          
BLAST of NO09G02750 vs. NCBI_GenBank
Match: ETI36017.1 (hypothetical protein F443_17771 [Phytophthora parasitica P1569] >ETK76243.1 hypothetical protein L915_17302 [Phytophthora parasitica] >ETL82904.1 hypothetical protein L917_17030 [Phytophthora parasitica] >ETM36138.1 hypothetical protein L914_17099 [Phytophthora parasitica] >ETO64750.1 hypothetical protein F444_17809 [Phytophthora parasitica P1976] >ETP05837.1 hypothetical protein F441_17649 [Phytophthora parasitica CJ01A1] >ETP33944.1 hypothetical protein F442_17626 [Phytophthora parasitica P10297])

HSP 1 Score: 167.5 bits (423), Expect = 1.200e-37
Identity = 103/304 (33.88%), Postives = 148/304 (48.68%), Query Frame = 0
Query:  246 NICKYWVANQGRCYQSKG-GCPKFHPPLSQLPNYYTAWLAKRQKERAHASQIEGDTHPPEDKTNKALRAVLFADWLVQTYGATTLAEGSGVVDVAGGKGDVSCRLWGEYGIRCTIVDPRATNFRKKVQQQVVRQRGGMEGIGRLPCIMPAGCLENEXXXXXXXXXXXXXXXXXXXXXXLKECSLVVGMHPDQATDGIFEAALTYGKPVACVPCCVFAREFPHRRRPNMAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVESYEHLIEYLMAKPTPWPGVACQRKFLPFLGRNQVLF 549
            N CKY+ ++ G     +G  C  +H            W+AKR ++RA A+ + GD   P  K +KA R+ +F DWLV++ G   LA G+GVVDVAGGKGD+  +LW + GI  T++DPR      K  +++V +    +G    P ++   CL++E                        +CS++VGMHPD+AT+ I +AALT GKP A VPCCV +R FP R+                                          V++Y+  I YL+ K       + QR+FLPF GRNQVL+
Sbjct:  169 NACKYYFSSSGGANCLRGEQCHFWHGQPEDFKENRRLWMAKRIEQRAKAAHLAGDNGDPHSKIDKAQRSRIFCDWLVESLGEGCLAAGTGVVDVAGGKGDIPIQLWIQRGIPTTLIDPRPMKL-GKYNRKLVAKAEFTKGRKMSPQLL--RCLDDE--------------TLKLHTELFTDCSVLVGMHPDEATEAIVDAALTLGKPFAIVPCCVMSRVFPDRQ------------------------------------CQDGTPVDTYDTFIRYLLEKHP-----SIQREFLPFAGRNQVLY 414          
BLAST of NO09G02750 vs. NCBI_GenBank
Match: ETI36018.1 (hypothetical protein, variant [Phytophthora parasitica P1569] >ETK76244.1 hypothetical protein, variant [Phytophthora parasitica] >ETL82905.1 hypothetical protein, variant [Phytophthora parasitica] >ETM36139.1 hypothetical protein, variant [Phytophthora parasitica] >ETO64751.1 hypothetical protein, variant [Phytophthora parasitica P1976] >ETP05838.1 hypothetical protein, variant [Phytophthora parasitica CJ01A1] >ETP33945.1 hypothetical protein, variant [Phytophthora parasitica P10297])

HSP 1 Score: 167.5 bits (423), Expect = 1.200e-37
Identity = 103/304 (33.88%), Postives = 148/304 (48.68%), Query Frame = 0
Query:  246 NICKYWVANQGRCYQSKG-GCPKFHPPLSQLPNYYTAWLAKRQKERAHASQIEGDTHPPEDKTNKALRAVLFADWLVQTYGATTLAEGSGVVDVAGGKGDVSCRLWGEYGIRCTIVDPRATNFRKKVQQQVVRQRGGMEGIGRLPCIMPAGCLENEXXXXXXXXXXXXXXXXXXXXXXLKECSLVVGMHPDQATDGIFEAALTYGKPVACVPCCVFAREFPHRRRPNMAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVESYEHLIEYLMAKPTPWPGVACQRKFLPFLGRNQVLF 549
            N CKY+ ++ G     +G  C  +H            W+AKR ++RA A+ + GD   P  K +KA R+ +F DWLV++ G   LA G+GVVDVAGGKGD+  +LW + GI  T++DPR      K  +++V +    +G    P ++   CL++E                        +CS++VGMHPD+AT+ I +AALT GKP A VPCCV +R FP R+                                          V++Y+  I YL+ K       + QR+FLPF GRNQVL+
Sbjct:  111 NACKYYFSSSGGANCLRGEQCHFWHGQPEDFKENRRLWMAKRIEQRAKAAHLAGDNGDPHSKIDKAQRSRIFCDWLVESLGEGCLAAGTGVVDVAGGKGDIPIQLWIQRGIPTTLIDPRPMKL-GKYNRKLVAKAEFTKGRKMSPQLL--RCLDDE--------------TLKLHTELFTDCSVLVGMHPDEATEAIVDAALTLGKPFAIVPCCVMSRVFPDRQ------------------------------------CQDGTPVDTYDTFIRYLLEKHP-----SIQREFLPFAGRNQVLY 356          
BLAST of NO09G02750 vs. NCBI_GenBank
Match: POM58783.1 (Zinc finger-containing protein [Phytophthora palmivora var. palmivora])

HSP 1 Score: 166.8 bits (421), Expect = 2.000e-37
Identity = 103/304 (33.88%), Postives = 147/304 (48.36%), Query Frame = 0
Query:  246 NICKYWVANQGRCYQSKG-GCPKFHPPLSQLPNYYTAWLAKRQKERAHASQIEGDTHPPEDKTNKALRAVLFADWLVQTYGATTLAEGSGVVDVAGGKGDVSCRLWGEYGIRCTIVDPRATNFRKKVQQQVVRQRGGMEGIGRLPCIMPAGCLENEXXXXXXXXXXXXXXXXXXXXXXLKECSLVVGMHPDQATDGIFEAALTYGKPVACVPCCVFAREFPHRRRPNMAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVESYEHLIEYLMAKPTPWPGVACQRKFLPFLGRNQVLF 549
            N CKY+ ++ G     +G  C  +H            W+AKR + RA A+ + GD+  P  K +KA R+ +F DWLV++ G   L+ G+GVVDVAGGKGD+  +LW + GI  T++DPR      K  +++V +   +EG    P ++   CL+ E                        +CS++VGMHPD+AT+ I +AAL  GKP A VPCCV +R FP R+                                          V++YE  ++YL+ K    P V  Q  FLPF GRNQVL+
Sbjct:  114 NTCKYYFSSSGGANCLRGEQCHFWHGRPEDFQENRRRWMAKRLERRAKAAHLAGDSGDPHSKIDKAQRSRIFCDWLVESLGVERLSGGTGVVDVAGGKGDIPIQLWIQRGIPTTLIDPRPMKL-GKYNRKLVAKAESIEGRKMSPQLL--RCLDQE--------------TMKLHTELFSDCSVLVGMHPDEATEAIVDAALALGKPFAIVPCCVMSRVFPDRQ------------------------------------CQDGTLVDTYEKFVKYLLEK---HPSV--QNAFLPFAGRNQVLY 359          
BLAST of NO09G02750 vs. NCBI_GenBank
Match: XP_002905213.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY53595.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 166.0 bits (419), Expect = 3.500e-37
Identity = 102/304 (33.55%), Postives = 144/304 (47.37%), Query Frame = 0
Query:  246 NICKYWVANQGRCYQSKG-GCPKFHPPLSQLPNYYTAWLAKRQKERAHASQIEGDTHPPEDKTNKALRAVLFADWLVQTYGATTLAEGSGVVDVAGGKGDVSCRLWGEYGIRCTIVDPRATNFRKKVQQQVVRQRGGMEGIGRLPCIMPAGCLENEXXXXXXXXXXXXXXXXXXXXXXLKECSLVVGMHPDQATDGIFEAALTYGKPVACVPCCVFAREFPHRRRPNMAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVESYEHLIEYLMAKPTPWPGVACQRKFLPFLGRNQVLF 549
            N CKY+ ++ G     +G  C  +H    +       W+AKR ++RA A+ + GD+  P  K +KA R+ +F DWLV + G   LA G+GVVDVAGGKGD+  +LW E GI  T++DPR     K  ++ V +        GR        CL++E                        + S++VGMHPD+AT+ I +AALT GKP A VPCCV +R FP R+                                          V++Y+  + YL+ K       + QR+FLPF GRNQVL+
Sbjct:  114 NACKYYFSSSGGANCLRGEQCHFWHGRPEEFEENRRRWMAKRLEQRAKAAHLAGDSGDPHSKIDKAQRSRIFCDWLVDSLGEDNLAAGTGVVDVAGGKGDIPIQLWIERGIPTTLIDPRPMKLGKYNRKLVAKAESTQ---GRKMNSQLLRCLDDE--------------TLKLHSELFTDSSVLVGMHPDEATEAIVDAALTLGKPFAIVPCCVMSRVFPDRQ------------------------------------CQDGTPVDTYDTFVRYLLEKHP-----SIQREFLPFAGRNQVLY 359          
BLAST of NO09G02750 vs. NCBI_GenBank
Match: XP_002907409.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY63973.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 165.6 bits (418), Expect = 4.500e-37
Identity = 103/311 (33.12%), Postives = 143/311 (45.98%), Query Frame = 0
Query:  241 PLLLENICKYWVANQGRCYQSKGGCPKFHPPLSQLPNYYTAWLAKRQKERAHASQIEGDTHPPEDKTNKALRAVLFADWLVQTYGATTLAEGSGVVDVAGGKGDVSCRLWGEYGIRCTIVDPRATNFRKKVQQQVVRQRGGMEGIGRLPCIMPAGCLENEXXXXXXXXXXXXXXXXXXXXXXLKECSLVVGMHPDQATDGIFEAALTYGKPVACVPCCVFAREFPHRRRPNMAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVESYEHLIEYLMAKPTPWPGVACQRKFLPFLGRNQVLFTLP 552
            PL     CK+W+ N   C Q    C  FH   ++       WL  R   +   + IE D   P  K  K  RA +F +WLV+T+GA  LA G GVVDVAGG+G+VS  LW +  + CT+++PR     K+  + + +Q+       R      A   E                        +++ SL++GMHPD+ATD IF+ A+ + KP A VPCCVF ++FPHRRR + +K                                    V SYE+L+EYL AK         ++ FLPF G+N VLF  P
Sbjct:  130 PLPTRAHCKFWI-NSKTC-QHGDNCEFFHVDDAERKTERAGWLKDRLHLKRVRAHIEEDPLEPHGKIGKQQRAQVFVEWLVETFGAEFLASGKGVVDVAGGRGNVSFELWNKRRLPCTLIEPRPMKLSKQQHKYLKKQKKER----RQSSETEASFSEALVPQVTALFNMDSFLETTENVQLVEQSSLLLGMHPDEATDSIFDVAIKFNKPFAVVPCCVFGQKFPHRRRADGSK------------------------------------VVSYENLVEYLAAKHP-----EIEKAFLPFDGKNLVLFRRP 393          
BLAST of NO09G02750 vs. NCBI_GenBank
Match: OQS07305.1 (hypothetical protein THRCLA_00686 [Thraustotheca clavata])

HSP 1 Score: 165.6 bits (418), Expect = 4.500e-37
Identity = 107/306 (34.97%), Postives = 147/306 (48.04%), Query Frame = 0
Query:  248 CKYWVANQGRCYQSKG-GCPKFHPPLSQLPNYYTAWLAKR-QKERAHASQIEGDTHPPEDKTNKALRAVLFADWLVQTYGATTLAEGSGVVDVAGGKGDVSCRLWGEYGIRCTIVDPRATNFRKKVQQQVVRQRGGMEGIGRLPCI---MPAGCLENEXXXXXXXXXXXXXXXXXXXXXXLKECSLVVGMHPDQATDGIFEAALTYGKPVACVPCCVFAREFPHRRRPNMAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVESYEHLIEYLMAKPTPWPGVACQRKFLPFLGRNQVLF 549
            CK+W+ N GRC  +KG  CP  H  LS + +   AWLA+R   +R  A Q E DT+ P  K +K  RA +FA WL+ T+G   L EGSGV+D+AGG+G V   LW  + I  T++DPR   + K+  Q +    G    +  L         G  +N+                      +K  SL++GMHPD+ATD I + A+ +GKP A VPCCVFA +FP RR  N                                       V++Y  L++YLM K    P +  Q  FLPF GRN+V++
Sbjct:  134 CKFWI-NTGRC--NKGDSCPMKHDDLSTVKSAKKAWLAERLHNKRLQAHQAE-DTNDPHAKQSKHFRAAIFATWLIDTFGFEMLKEGSGVMDIAGGRGGVCFELWHHHKIPTTLIDPRPMKYTKRQHQYLAAHPGETHVVQWLELFEAKFYIGSKKNQ-----------------DKVDHMKNTSLLLGMHPDEATDVIVDVAIAFGKPFAIVPCCVFAEQFPDRRTTN------------------------------------GEVVKTYNDLVDYLMNK---HPNM--QSHFLPFDGRNRVIY 377          
BLAST of NO09G02750 vs. NCBI_GenBank
Match: XP_008896274.1 (hypothetical protein PPTG_04175 [Phytophthora parasitica INRA-310] >ETN18634.1 hypothetical protein PPTG_04175 [Phytophthora parasitica INRA-310])

HSP 1 Score: 165.2 bits (417), Expect = 5.900e-37
Identity = 102/304 (33.55%), Postives = 147/304 (48.36%), Query Frame = 0
Query:  246 NICKYWVANQGRCYQSKG-GCPKFHPPLSQLPNYYTAWLAKRQKERAHASQIEGDTHPPEDKTNKALRAVLFADWLVQTYGATTLAEGSGVVDVAGGKGDVSCRLWGEYGIRCTIVDPRATNFRKKVQQQVVRQRGGMEGIGRLPCIMPAGCLENEXXXXXXXXXXXXXXXXXXXXXXLKECSLVVGMHPDQATDGIFEAALTYGKPVACVPCCVFAREFPHRRRPNMAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVESYEHLIEYLMAKPTPWPGVACQRKFLPFLGRNQVLF 549
            N CKY+ ++       +G  C  +H            W+AKR ++RA A+ + GD   P  K +KA R+ +F DWLV++ G   LA G+GVVDVAGGKGD+  +LW + GI  T++DPR      K  +++V +    +G    P ++   CL++E                        +CS++VGMHPD+AT+ I +AALT GKP A VPCCV +R FP R+                                          V++Y+  I YL+ K       + QR+FLPF GRNQVL+
Sbjct:  169 NACKYYFSSSSGANCLRGEQCHFWHGQPEDFKENRRLWMAKRIEQRAKAAHLAGDNGDPHSKIDKAQRSRIFCDWLVESLGEGCLAAGTGVVDVAGGKGDIPIQLWIQRGIPTTLIDPRPMKL-GKYNRKLVAKAEFTKGRKMSPQLL--RCLDDE--------------TLKLHTELFTDCSVLVGMHPDEATEAIVDAALTLGKPFAIVPCCVMSRVFPDRQ------------------------------------CQDGTPVDTYDTFIRYLLEKHP-----SIQREFLPFAGRNQVLY 414          
The following BLAST results are available for this feature:
BLAST of NO09G02750 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27513.12.700e-13846.72Zinc finger, CCCH-type [Nannochloropsis gaditana][more]
GAY00983.12.400e-3827.81Hypothetical protein PINS_008838 [Pythium insidios... [more]
XP_009521425.19.100e-3833.88hypothetical protein PHYSODRAFT_481813 [Phytophtho... [more]
ETI36017.11.200e-3733.88hypothetical protein F443_17771 [Phytophthora para... [more]
ETI36018.11.200e-3733.88hypothetical protein, variant [Phytophthora parasi... [more]
POM58783.12.000e-3733.88Zinc finger-containing protein [Phytophthora palmi... [more]
XP_002905213.13.500e-3733.55conserved hypothetical protein [Phytophthora infes... [more]
XP_002907409.14.500e-3733.12conserved hypothetical protein [Phytophthora infes... [more]
OQS07305.14.500e-3734.97hypothetical protein THRCLA_00686 [Thraustotheca c... [more]
XP_008896274.15.900e-3733.55hypothetical protein PPTG_04175 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL120nonsL120Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR022ncniR022Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR021ncniR021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR129ngnoR129Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010799NSK010799Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G02750.1NO09G02750.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|588582gene_4274Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G02750.1NO09G02750.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G02750 ID=NO09G02750|Name=NO09G02750|organism=Nannochloropsis oceanica|type=gene|length=1743bp
ATGGGGGCTTTCCCGCGCTGCCGGGATCACGCAGAGATGGCGCCTTTTAT
TCTTTCCAGCTCCGATTTGCAGTCGACCTTCCCATCCCCCCCATCCTCCT
CCCCATCCTCCTTTTTCTCCTCTCCCTCCGCATCCTCCATCCCTTCGATA
CAAGTCAAGACGCTCTACACCGTCCGGGGCCGGGTTTGCGCTCGGCGACC
GTTTGCCAAGTGCATGCTGTTCTTTGACCTGGTGGATGCCAAGACACGCA
ATCAAACCCGCGGTGACCTCGTCATTCGTCTTGAATGCCTATTACATGCC
AAGGGACTGGCAGGGCTGGAGAGAGCTCATGTGAAAAAAATAATGCATGA
CGTGCATATGGGTGATGTGCTGGAGGTGGATGGGTTTCTCGATACGCGAC
AGGAATTTCTAGTGTTAGAGGCAAAGGAATTCCGGGTAGTTGAGGCGTGG
AAGTCCTTGCAAGAAAACCCCAGGGTCGGCTTTGTCTTGGAGTGGCCTTC
TGCATCCCAAGAAGAGATGAAAATCGAAGCGGAAGCATCAGCATCAGGAG
CAGCGACAACGGAACGAGCTTCGGGAGCAGTAGCAGCAGCAGCTTCAGTA
CTATTACTAGCTAAAGAGAGCAGCAGCAATGCAAATCAAGAGGGCCATAG
CAGTCACACCCTCGGCAACAATGCCAACAAAATGAGCGATAACAACAATA
AAGATAAAAGCTCGCTTCCTCCCCTCCTGCTTGAAAACATCTGTAAATAC
TGGGTCGCCAACCAGGGCCGCTGCTATCAATCAAAAGGCGGCTGTCCCAA
ATTCCATCCCCCCCTTTCTCAGCTTCCTAATTACTACACCGCCTGGCTTG
CCAAGCGTCAAAAAGAGCGAGCGCACGCCTCTCAAATCGAAGGAGACACC
CACCCTCCTGAAGATAAGACCAACAAAGCTCTTCGTGCCGTGTTATTTGC
AGATTGGCTGGTGCAGACCTACGGGGCGACGACGCTGGCGGAGGGGAGCG
GGGTGGTTGATGTGGCGGGAGGGAAGGGAGATGTGTCTTGTCGGCTGTGG
GGAGAGTATGGAATCAGGTGCACCATTGTCGATCCTCGTGCGACGAATTT
TAGGAAGAAGGTGCAGCAGCAGGTGGTGAGACAGAGGGGTGGGATGGAAG
GCATTGGGCGCTTGCCCTGCATCATGCCCGCGGGGTGTTTGGAGAATGAG
GAGGAGGAAGGGGGGGAGGACGGGGAGGATGGGGCGCAAGACCAGAAAAG
AAGGTTAAGGAGAGTCTTGAAAGAGTGTTCACTGGTCGTGGGCATGCACC
CTGACCAAGCGACAGATGGCATATTTGAGGCGGCGTTGACTTATGGCAAG
CCCGTAGCATGTGTGCCGTGTTGTGTGTTTGCACGAGAGTTCCCGCATCG
ACGGCGACCGAATATGGCGAAGGAGAAAGTGGAAGTGGAAGAAAAGGAAG
AGAGGGAGAAGGAGAAAGGGAAGGAGACCAACGTTGTGCAGGAGGGGGCG
GAGGAGGAAGGAGGGGAGGAAGGGCAGGAGGTAGAGAGTTACGAGCACTT
GATTGAGTATTTGATGGCGAAGCCAACGCCATGGCCAGGGGTGGCGTGTC
AGAGGAAGTTTTTGCCGTTTTTGGGGCGGAATCAGGTCTTATTTACGTTG
CCTCCTTCCCTGTCTTCTTGGACAGACGGGGAGGAGGGAGGGAGGGAGGA
CGAGGGGGAGGAGGCGAAGGGGGAGGTGGCGGGTGGATGTTAG
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protein sequence of NO09G02750.1

>NO09G02750.1-protein ID=NO09G02750.1-protein|Name=NO09G02750.1|organism=Nannochloropsis oceanica|type=polypeptide|length=581bp
MGAFPRCRDHAEMAPFILSSSDLQSTFPSPPSSSPSSFFSSPSASSIPSI
QVKTLYTVRGRVCARRPFAKCMLFFDLVDAKTRNQTRGDLVIRLECLLHA
KGLAGLERAHVKKIMHDVHMGDVLEVDGFLDTRQEFLVLEAKEFRVVEAW
KSLQENPRVGFVLEWPSASQEEMKIEAEASASGAATTERASGAVAAAASV
LLLAKESSSNANQEGHSSHTLGNNANKMSDNNNKDKSSLPPLLLENICKY
WVANQGRCYQSKGGCPKFHPPLSQLPNYYTAWLAKRQKERAHASQIEGDT
HPPEDKTNKALRAVLFADWLVQTYGATTLAEGSGVVDVAGGKGDVSCRLW
GEYGIRCTIVDPRATNFRKKVQQQVVRQRGGMEGIGRLPCIMPAGCLENE
EEEGGEDGEDGAQDQKRRLRRVLKECSLVVGMHPDQATDGIFEAALTYGK
PVACVPCCVFAREFPHRRRPNMAKEKVEVEEKEEREKEKGKETNVVQEGA
EEEGGEEGQEVESYEHLIEYLMAKPTPWPGVACQRKFLPFLGRNQVLFTL
PPSLSSWTDGEEGGREDEGEEAKGEVAGGC*
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Synonyms
Publications