NO09G02720, NO09G02720 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO09G02720 vs. NCBI_GenBank
Match: EWM27520.1 (presenilin-like protein [Nannochloropsis gaditana]) HSP 1 Score: 310.8 bits (795), Expect = 4.800e-81 Identity = 206/328 (62.80%), Postives = 220/328 (67.07%), Query Frame = 0 Query: 1 MAWQLSRFEEWTGWALLVVLALYDLCAVLTPCGPLKYLVGLMQERDAPTMPGLLYEAELPAHARHHHRVPPPLVGR-----TGGIAVAA--DTRVEGMQRTDLQTPVRDVSREDGG-PAALIPSGPASSLHCNNPPSPLDPLLDSSHSSPGGDHLDXXXXXXXXXXXXXXXXXXXXXXXXXXSSLLEVG-GTPQEEGDAE-GSGERGNXXXXXXSGTADYPLSSXXXXXXXGGRGAPE-ERSIKLGLGDFVFYSVLVGKAALYGFATCAACFLVIISGLGATLVLLSVFRKALPALPISIGLGVLFYLLTRVVIIPYIDALVSLPLYV 318 MAWQLSRFEEWTGWALLVVLALYDLCAVLTPCGPL+YLVGLMQE + P MPGLLYEAELP HARHHHR+PP R TG +A A D EG LQ PV D DG A+ A ++H +PPSPLDPLLD + SSPGG HL +LLE G G+P E G+ G ER XXXXX LSS G PE ERSIKLGLGDFVFYSVLVGKAALYGFATCAACFLVII+GLGATLVLLSVFRKALPALPISIGLGVLFYLLTRV IIPYIDALVS P+YV Sbjct: 214 MAWQLSRFEEWTGWALLVVLALYDLCAVLTPCGPLRYLVGLMQEYNEP-MPGLLYEAELPGHARHHHRIPPSTALRGSERATGALASAGSLDGGCEG-DDVRLQAPVGD----DGAFSPAMALGSQAHTVHSTSPPSPLDPLLDGTQSSPGGTHL------GQHHPPHPSRSLRRVSRSQGGETLLEDGMGSPVEGGNEHGGESERXXXXXXXRGHGPSEGLSSSSHHQG----GTPEQERSIKLGLGDFVFYSVLVGKAALYGFATCAACFLVIIAGLGATLVLLSVFRKALPALPISIGLGVLFYLLTRVAIIPYIDALVSTPIYV 525
BLAST of NO09G02720 vs. NCBI_GenBank
Match: GAX28476.1 (presenilin 1 [Fistulifera solaris]) HSP 1 Score: 173.7 bits (439), Expect = 9.100e-40 Identity = 127/330 (38.48%), Postives = 166/330 (50.30%), Query Frame = 0 Query: 1 MAWQLSRFEEWTGWALLVVLALYDLCAVLTPCGPLKYLVGLMQERDAPTMPGLLYEAELPAHARHHHRVPPPLVGRTGGIAVAADTRVEGMQRTDLQTPV-RDVSREDGGPAALIP------------SGPASSLHCNNPPSPLDPLLDSSHSSPGGDHLDXXXXXXXXXXXXXXXXXXXXXXXXXXSSLLEVGGTPQEEGDAEGSGERGNXXXXXXSGTADYPLSSXXXXXXXGGRGAPEERSIKLGLGDFVFYSVLVGKAALYGFATCAACFLVIISGLGATLVLLSVFRKALPALPISIGLGVLFYLLTRVVIIPYIDALVSLPLYV 318 +AW LS F++WT W LL++LALYDLCAVLTPCGPLK+LV M + +P MPGLL+EAELP A+ P+ G +AA ++R+ PV + + P IP S P+SS+ P D + +S D + G E D G +R A+ G PE+ SI+LGLGDF+FYSVLV KAA Y FAT AAC LVI++GLG TLVLLSV+ ALPALPISI +G++FY+LTR I P+++A++ P YV Sbjct: 234 LAWHLSFFDDWTAWTLLLMLALYDLCAVLTPCGPLKFLVEAMSQEGSPEMPGLLFEAELPPEAKR------PVGSSRGRANIAAS--ASDVERSAPPNPVSQPMDGSSESPRVKIPLAIAKVYQLPVVSIPSSSMSIMFPDRSSDTIGTTSPLLTNSDSTVILPENPTAEQLLAKVVVRLPAHGGRLEHVQRRGKKVYLERDRHGVPKRYLWVDRNGKVFAE---------MKDGDEEKPEKNSIRLGLGDFIFYSVLVAKAAQYSFATFAACILVILAGLGGTLVLLSVYHHALPALPISIFMGIVFYVLTRWFIEPWVEAVLEKPYYV 546
BLAST of NO09G02720 vs. NCBI_GenBank
Match: GAX09612.1 (presenilin 1 [Fistulifera solaris]) HSP 1 Score: 161.8 bits (408), Expect = 3.600e-36 Identity = 119/316 (37.66%), Postives = 150/316 (47.47%), Query Frame = 0 Query: 1 MAWQLSRFEEWTGWALLVVLALYDLCAVLTPCGPLKYLVGLMQERDAPTMPGLLYEAELPAHARHHHRVPPPLVGRTGGIAVAADTRVEGMQRTDLQTPVRDVSREDGG----PAALIP------------SGPASSLHCNNPPSPLDPLLDSSHSSPGGDHLDXXXXXXXXXXXXXXXXXXXXXXXXXXSSLLEVGGTPQEEGDAEGSGERGNXXXXXXSGTADYPLSSXXXXXXXGGRGAPEERSIKLGLGDFVFYSVLVGKAALYGFATCAACFLVIISGLGATLVLLSVFRKALPALPISIGLGVLFYLLTR 301 +AW LS F++WT W LL++LALYDLCAVLTPCGPLK+LV M + +P MPGLL+EAELP A+ R GG + + P +S+ G P IP S P+SS+ P D + +S D + G E D G +R A+ G PE+ SI+LGLGDF+FYSVLV KAA Y FAT AAC LVI++GLG TLVLLSV+ ALPALPISI +G++FY+ TR Sbjct: 233 LAWHLSFFDDWTAWTLLLMLALYDLCAVLTPCGPLKFLVEAMSQEGSPEMPGLLFEAELPPEAK-----------RPGGSSRGRANIAASASDVERSAPSNPISQPTDGLSESPRVKIPLAIAKVYQLPVVSIPSSSMSIMFPDRNSDTIGTTSPLLTNSDSTIILPDNPSAEQLLAKVVVRLPAHGGRLEHVQRRGKKVYLERDRHGVPKRYLWVDRNGKVFAE---------MKDGDEEKPEKNSIRLGLGDFIFYSVLVAKAAQYSFATFAACILVILAGLGGTLVLLSVYHHALPALPISIFMGIVFYVFTR 528
BLAST of NO09G02720 vs. NCBI_GenBank
Match: XP_002176847.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC51310.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 156.0 bits (393), Expect = 2.000e-34 Identity = 118/317 (37.22%), Postives = 147/317 (46.37%), Query Frame = 0 Query: 1 MAWQLSRFEEWTGWALLVVLALYDLCAVLTPCGPLKYLVGLMQERDAPTMPGLLYEAELPAHARHHHRVPPPLVGRTGGIAVAADTRVEGMQRTDLQTPVRDVSREDGGPAALIPSGPASSLHCNNPPSPLDPLLDSSHSSPGGDHLDXXXXXXXXXXXXXXXXXXXXXXXXXXSSLLEVGGTPQEEGDAEGSGERGNXXXXXXSGTADYPLSSXXXXXXXGGRGAPEERSIKLGLGDFVFYSVLVGKAALYGFATCAACFLVIISGLGATLVLLSVFRKALPALPISIGLGVLFYLLTRVVIIPYIDALVSLPLYV 318 +AW LS F++WT W LL++LALYDLCAVLTPCGPLK LV LM + D+P MPGLL+EAELP A+ R GG +R + T+ Q +SH G V T Q++ + GN SI+LGLGDF+FYSVLV KAA Y FAT AAC LVI++GLG TLVLLSV+ ALPALPISI LGV+FY+LTR + P+I+A+++ P YV Sbjct: 103 LAWHLSYFDDWTTWTLLMMLALYDLCAVLTPCGPLKALVNLMSQDDSPDMPGLLFEAELPPEAK-----------RPGG----KKSRPDNSAETNSQV--------------------------------------TSHQEGSG----------------------------------LVKSTEQQD-------QAGNDG----------------------------HNSIRLGLGDFIFYSVLVAKAAQYSFATFAACLLVILAGLGGTLVLLSVYHSALPALPISIFLGVIFYILTRWSVEPWIEAILTRPYYV 297
BLAST of NO09G02720 vs. NCBI_GenBank
Match: CBN74004.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 140.6 bits (353), Expect = 8.500e-30 Identity = 138/355 (38.87%), Postives = 152/355 (42.82%), Query Frame = 0 Query: 1 MAWQLSRFEEWTGWALLVVLALYDLCAVLTPCGPLKYLVGLMQERDAPTMPGLLYEAELPA-----HARHHHRVPPPLVGRTGGIAVAADTRVEGMQRTDLQTPVRDVSREDGGPAALIPSGPASSLHCNNPPSPLDPLLDSSHSSPGGDHLDXXXXXXXXXXXXXXXXXXXXXXXXXXSSLLEVGGTPQEEGD--AEGSGER-GNXXXXXXSGTADYPL--SSXXXXXXXGGRGAPEERSIKL-----------------------------GLGDFVFYSVLVGKAALYGFATCAACFLVIISGLGATLVLLSVFRKALPALPISIGLGVLFYLLTRVVIIPYIDALVSLPLY 317 MAWQLSRFEEWTGW LLVVLALYDLCAVLTPCGPLK LV LMQE + P MPGLLYEAELPA XXXXXXXXXXX L+E G GD A+GSG R G T + G R E+ ++L DFVFYSVLV KAALYGF AAC +VI+ GLGATLVLL+V+R ALPALPISIG G +FYLLTR I PY++AL PLY Sbjct: 228 MAWQLSRFEEWTGWCLLVVLALYDLCAVLTPCGPLKALVNLMQEYEEP-MPGLLYEAELPAGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGADSAGASESVAAPLLELVESGTAAVAVGDASADGSGTRSGREQGKRRLATVRRGIRGGGCLDPEPPGWRTVQAEKKLELFSPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFVFYSVLVSKAALYGFTAWAACVVVIVFGLGATLVLLAVYRMALPALPISIGFGTVFYLLTRFSIQPYVEALNETPLY 581
BLAST of NO09G02720 vs. NCBI_GenBank
Match: XP_002288037.1 (presenilin, partial [Thalassiosira pseudonana CCMP1335] >EED95480.1 presenilin, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 140.6 bits (353), Expect = 8.500e-30 Identity = 110/306 (35.95%), Postives = 149/306 (48.69%), Query Frame = 0 Query: 1 MAWQLSRFEEWTGWALLVVLALYDLCAVLTPCGPLKYLVGLMQERDAPTMPGLLYEAELPAHARHHHRVPPPLVGRTGGIAVAADTRVEGMQRTDLQTPVRDVSREDGGPAALIPSGPASSLHCNNPPSPLDPLLDSSHSSPGGDHLDXXXXXXXXXXXXXXXXXXXXXXXXXXSSLLEVGGTPQEEGDAEGSGERGNXXXXXXSGTADYPLSSXXXXXXXGGRGAPEERSIKLGLGDFVFYSVLVGKAALYGFATCAACFLVIISGLGATLVLLSVFRKALPALPISIGLGVLFYLLTRVVIIPY 307 +AWQLS F+ + W LL++LALYDLCAVLTP GPL+ LV LM + D+P MPGLLYEA++P + P + GR D EG Q+P +S E ++ +G + S D S+PG + + + Q E +A + + + TA P + +IKLGLGDF+FYSVLV K+A Y FA + FLV+++GLG TLVLL+VF+ ALPALPISI L V FY+ TR +I P+ Sbjct: 113 IAWQLSHFDTISTWTLLIMLALYDLCAVLTPVGPLRLLVNLMSDEDSPEMPGLLYEAQIPEGLKR-----PVMGGRN-----KDDNGDEGEHDDSSQSPPASMSAERYQQPSIKENGVPGRTSSDVSASQGD------DSAPGVE--------------------MSSAVNRTRNDSYDSVTLDQSENNATTTPDLAPAHASSSAKTAMIPFAIAELF----------SNTIKLGLGDFIFYSVLVAKSAQYSFACFVSSFLVVLAGLGGTLVLLAVFKHALPALPISIFLAVTFYVFTRFIIEPW 372
BLAST of NO09G02720 vs. NCBI_GenBank
Match: XP_008615248.1 (hypothetical protein SDRG_11008 [Saprolegnia diclina VS20] >EQC31407.1 hypothetical protein SDRG_11008 [Saprolegnia diclina VS20]) HSP 1 Score: 138.7 bits (348), Expect = 3.200e-29 Identity = 117/319 (36.68%), Postives = 155/319 (48.59%), Query Frame = 0 Query: 1 MAWQLSRFEEWTGWALLVVLALYDLCAVLTPCGPLKYLVGLMQERDAPTMPGLLYEAELPAHARH------HHRVPPPLVGRTGGIAVAADTRVEGMQRTDLQTPVRDVSREDGGPAALIPSGPASSLHCNNPPSPLDPLLDSSHSSPGGDHLDXXXXXXXXXXXXXXXXXXXXXXXXXXSSLLEVGGTPQEEGDAEGSGERGNXXXXXXSGTADYPLSSXXXXXXXGGRGAPEERSIKLGLGDFVFYSVLVGKAALYGFATCAACFLVIISGLGATLVLLSVFRKALPALPISIGLGVLFYLLTRVVIIPYIDALVSL 314 MAWQLS+F EWT WAL+VVLA YDLCAVLTPCGPLK LV L+Q P +PGLLYEAE+ H H P P + T A+D +R+ Q + ++ L+P P + PS D L+ + +++ D L ++L + EGD ER Y L + E+ +IKLGLGDFVFYSVLV +AALY A AC + I+ GLG TL LL + ++ALPALPISI LGV Y+ R V+ +++ ++L Sbjct: 192 MAWQLSKFPEWTTWALVVVLAFYDLCAVLTPCGPLKCLVNLIQSEGRP-LPGLLYEAEVQTRFDHSEPNYYQHGGPLPAITTT---TTASDVCSFARRRSKPQDEDEESLEKEAQTEPLLPPQPVAK---KPKPSVRDRLV-AFYTAYNPDALS------------------------RIDNILAM--YEGREGDLWRDLER------------KYGLDTDD----------EEDNTIKLGLGDFVFYSVLVSRAALYDVAAMWACAVAILVGLGGTLFLLGIHKQALPALPISILLGVAVYVWMRCVLFEFMNVTLAL 454
BLAST of NO09G02720 vs. NCBI_GenBank
Match: XP_012196195.1 (hypothetical protein SPRG_02256 [Saprolegnia parasitica CBS 223.65] >KDO33449.1 hypothetical protein SPRG_02256 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 138.7 bits (348), Expect = 3.200e-29 Identity = 117/317 (36.91%), Postives = 154/317 (48.58%), Query Frame = 0 Query: 1 MAWQLSRFEEWTGWALLVVLALYDLCAVLTPCGPLKYLVGLMQERDAPTMPGLLYEAELPAHARH----HHRVPPPLVGRTGGIAVAADTRVEGMQRTDLQTPVRDVSREDGGPAALIPSGPASSLHCNNPPSPLDPLLDSSHSSPGGDHLDXXXXXXXXXXXXXXXXXXXXXXXXXXSSLLEVGGTPQEEGDAEGSGERGNXXXXXXSGTADYPLSSXXXXXXXGGRGAPEERSIKLGLGDFVFYSVLVGKAALYGFATCAACFLVIISGLGATLVLLSVFRKALPALPISIGLGVLFYLLTRVVIIPYIDALVSL 314 MAWQLS+F EWT WAL+VVLA YDLCAVLTPCGPLK LV L+Q P +PGLLYEAE+ H +++ PL T A+D +R+ Q D + L+P P L P + + L + +++ D LD S+L + EGD ER Y L + E+ +IKLGLGDFVFYSVLV +AALY + AC + I+ GLG TL LL + ++ALPALPISI LGV Y R V+ +++ ++L Sbjct: 192 MAWQLSKFPEWTTWALVVVLAFYDLCAVLTPCGPLKCLVNLIQSEGRP-LPGLLYEAEVQTRFDHTEPKYYQHGGPLPSVTATATTASDVCSFARRRSKPQDEDDDSLETEAQTEPLLP--PPVVL---KPKTSVRDRLVAFYTAYNPDALD------------------------RVDSILAM--YEGREGDLWRDLER------------KYGLDTDD----------EEDNTIKLGLGDFVFYSVLVSRAALYDVSAMWACAVAILMGLGGTLFLLGIHKQALPALPISILLGVAVYFWMRCVLFDFMNMTLAL 454
BLAST of NO09G02720 vs. NCBI_GenBank
Match: XP_008862967.1 (hypothetical protein H310_01595 [Aphanomyces invadans] >ETW09162.1 hypothetical protein H310_01595 [Aphanomyces invadans]) HSP 1 Score: 136.7 bits (343), Expect = 1.200e-28 Identity = 113/311 (36.33%), Postives = 144/311 (46.30%), Query Frame = 0 Query: 1 MAWQLSRFEEWTGWALLVVLALYDLCAVLTPCGPLKYLVGLMQERDAPTMPGLLYEAELPAHARHHHRVPPPLVGRTGGIAVAADTRVEGMQRTDLQTPVRDVSREDGGPAALIPSGPASSLHCNNPPSPLDPLLDSSHSSPGGDHLDXXXXXXXXXXXXXXXXXXXXXXXXXXSSLLEVGGTPQEEGDAEGSGERGNXXXXXXSGTADYPLSSXXXXXXXGGRGAPEERSIKLGLGDFVFYSVLVGKAALYGFATCAACFLVIISGLGATLVLLSVFRKALPALPISIGLGVLFYLLTRVVIIPYIDALV 312 MAWQLS+F EWT WAL+VVLA YDLCAVLTPCGPLK LV L+Q+ P +PGLLYEAE+ H P + GG + G Q T T R + P S +S PL L + ++ E + E D + G A Y ++ +IKLGLGDFVFYSVLV +AA++ AC + I+ GLG+TL LLSV++KALPALPISI LGV YL R V++ ++D+ V Sbjct: 196 MAWQLSKFPEWTTWALVVVLAFYDLCAVLTPCGPLKCLVNLIQQEGRP-LPGLLYEAEV--QRTFHSDAHSPSYYQRGG--PPCPEQATGTQTTCTFTRRRSRPDDSHEPLLAAASSTDTSEMTTTAKLPLRDRLVAFYN--------------------------------------EYNPSAIERVDQVLAIYEGRERDLWNDLAAKYGPHDDD----------EDDNTIKLGLGDFVFYSVLVSRAAMFDVMAMIACLVSILMGLGSTLFLLSVYKKALPALPISILLGVAIYLWVRFVLVDFMDSTV 453
BLAST of NO09G02720 vs. NCBI_GenBank
Match: XP_008862968.1 (hypothetical protein, variant [Aphanomyces invadans] >ETW09163.1 hypothetical protein, variant [Aphanomyces invadans]) HSP 1 Score: 136.7 bits (343), Expect = 1.200e-28 Identity = 113/311 (36.33%), Postives = 144/311 (46.30%), Query Frame = 0 Query: 1 MAWQLSRFEEWTGWALLVVLALYDLCAVLTPCGPLKYLVGLMQERDAPTMPGLLYEAELPAHARHHHRVPPPLVGRTGGIAVAADTRVEGMQRTDLQTPVRDVSREDGGPAALIPSGPASSLHCNNPPSPLDPLLDSSHSSPGGDHLDXXXXXXXXXXXXXXXXXXXXXXXXXXSSLLEVGGTPQEEGDAEGSGERGNXXXXXXSGTADYPLSSXXXXXXXGGRGAPEERSIKLGLGDFVFYSVLVGKAALYGFATCAACFLVIISGLGATLVLLSVFRKALPALPISIGLGVLFYLLTRVVIIPYIDALV 312 MAWQLS+F EWT WAL+VVLA YDLCAVLTPCGPLK LV L+Q+ P +PGLLYEAE+ H P + GG + G Q T T R + P S +S PL L + ++ E + E D + G A Y ++ +IKLGLGDFVFYSVLV +AA++ AC + I+ GLG+TL LLSV++KALPALPISI LGV YL R V++ ++D+ V Sbjct: 188 MAWQLSKFPEWTTWALVVVLAFYDLCAVLTPCGPLKCLVNLIQQEGRP-LPGLLYEAEV--QRTFHSDAHSPSYYQRGG--PPCPEQATGTQTTCTFTRRRSRPDDSHEPLLAAASSTDTSEMTTTAKLPLRDRLVAFYN--------------------------------------EYNPSAIERVDQVLAIYEGRERDLWNDLAAKYGPHDDD----------EDDNTIKLGLGDFVFYSVLVSRAAMFDVMAMIACLVSILMGLGSTLFLLSVYKKALPALPISILLGVAIYLWVRFVLVDFMDSTV 445 The following BLAST results are available for this feature:
BLAST of NO09G02720 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO09G02720 ID=NO09G02720|Name=NO09G02720|organism=Nannochloropsis oceanica|type=gene|length=954bpback to top protein sequence of NO09G02720.1 >NO09G02720.1-protein ID=NO09G02720.1-protein|Name=NO09G02720.1|organism=Nannochloropsis oceanica|type=polypeptide|length=318bpback to top Synonyms
Publications
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