NO09G02710, NO09G02710 (gene) Nannochloropsis oceanica

Overview
NameNO09G02710
Unique NameNO09G02710
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3637
Alignment locationchr9:804531..808167 +

Link to JBrowse

Properties
Property NameValue
DescriptionDna rna non-specific nuclease
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:804531..808167 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO:0003676nucleic acid binding
GO:0016787hydrolase activity
GO:0005488binding
Vocabulary: INTERPRO
TermDefinition
IPR001604DNA/RNA_non-sp_Endonuclease
IPR020821Extracellular_endonuc_su_A
Homology
BLAST of NO09G02710 vs. NCBI_GenBank
Match: EWM27523.1 (dna rna non-specific nuclease [Nannochloropsis gaditana])

HSP 1 Score: 438.7 bits (1127), Expect = 2.000e-119
Identity = 224/344 (65.12%), Postives = 258/344 (75.00%), Query Frame = 0
Query:   44 AHAQA-HQANDLHKWSHVGLPAFDTTYIFRENFVICYDSRTRNPKWVMERLTKQTCTGEADRRVVGFYEEDSIDPRFRSKNSDYLNSGYDRGHMASAANNRSSTQTMQETFSLANVSPQVGGGFNRDYWARVEKFTRDLTKHCDAVYLVSGPLFLP-QRRDTIITSTSNTASKAKFIMTYELLGEAPSLVAVPTHFFKCVFAEMRNGRKVVAAFVLPNAPIHADVPLTRFLVPLANLEQAAGFRMFAQALTEEEREEVDARVLGLRGVGAGNGGEEVRIEGMLTNGISDXXXXXXXXXXXXXXXXXXXXXXXXIKLNLDAPEHLCDVVLCQLPPEKFWQVNGNK 386
            A AQA   A DL KWS VGLP  +TTY+FRENFV+CYD+RTRNP+WVMER+T+ TC GEADRRVV FYEE+SIDP FRSKNSDYLNSGYDRGHMA AANNRSS +TM+ETF+LANVSPQVGGGFNRDYWARVEKFTRDLTK C +VYLVSGPLFLP Q++      TSN  SKA+FIM+YELLG+ P LVAVPTHFFKCV AE+  GR +VAAFVLPNAPI  +VPLTRFLVPL NLEQAAG R FAQAL++E++E +D RV  LRG     GGEE  I G+L                              ++LNL  PEHLC+ + CQLPPE+FW++   +
Sbjct:   39 AQAQAPGMARDLDKWSQVGLPGGETTYMFRENFVVCYDARTRNPRWVMERITRDTCRGEADRRVVSFYEEESIDPSFRSKNSDYLNSGYDRGHMAPAANNRSSVKTMEETFTLANVSPQVGGGFNRDYWARVEKFTRDLTKRCQSVYLVSGPLFLPRQKQAGDAPFTSNPTSKARFIMSYELLGDPPGLVAVPTHFFKCVLAEV-EGRYLVAAFVLPNAPIPPEVPLTRFLVPLENLEQAAGVRFFAQALSQEDKERLDGRVQLLRGT---LGGEEGGIAGLLAAQAPSTALVTREGYGHDSGRWGKGRNKGGLRLNLAGPEHLCEALACQLPPERFWELTDGR 378          
BLAST of NO09G02710 vs. NCBI_GenBank
Match: PRW44603.1 (mitochondrial nuclease [Chlorella sorokiniana])

HSP 1 Score: 233.8 bits (595), Expect = 1.000e-57
Identity = 137/362 (37.85%), Postives = 195/362 (53.87%), Query Frame = 0
Query:   38 DAAGFVAHAQAHQANDLHKWSHVGLPAFDTTYIFRENFVICYDSRTRNPKWVMERLTK-QTCTGEADRRVVGFYEEDSIDPRFRSKNSDYLNSGYDRGHMASAANNRSSTQTMQETFSLANVSPQVGGGFNRDYWARVEKFTRDLTKHCDAVYLVSGPLFLPQRRDTIITSTSNTASKAKFIMTYELLGEAPSLVAVPTHFFKCVFAEMRNGRK-VVAAFVLPNAPIHADVPLTRFLVPLANLEQAAGFRMFAQALTEEEREEVDARVLGLRGVGAGNGGEEVRIEGMLTNGISDXXXXXXXXXXXXXXXXXXXXXXXXIKLNLDAPEHLCDVVLCQLPPEKFWQVNGNKKNREKRKNRDDS 398
            D  GF A A AH A       H G+P  D   +F + F   +D+R RNP+WV+E + + +  + E  R+   F E+  I+ RFRSK  DY  SGYDRGHMA A+N++++  TM ETFSL N+SPQVG GFNRDYWAR E+F +DLTK CD V++V+GPL+LPQR     +          + M +E++G  P L+AVPTH++K V  E   GR+  V AFV+PN+PI  + PL  F VPL  LE+ AG + F   L++  RE +D   L ++ +G     +  R++      +                           +       H+C+   C+LP E+FW+ NG     ++   R  S
Sbjct:   38 DVGGFGA-AAAHPA-----LKH-GMPVGDRLRLFTD-FAASFDTRLRNPRWVLEHINRGKLSSREGSRQNSEFVEDSGIERRFRSKLDDYRGSGYDRGHMAPASNHKTTQSTMDETFSLTNMSPQVGAGFNRDYWARFERFVQDLTKRCDDVWIVTGPLYLPQR-----SPQPQKNGAPGYRMQHEMIGSPPQLMAVPTHYYKVVLGEYGGGRRAAVGAFVMPNSPIDPETPLASFAVPLGALEEVAGLKFFPGYLSDSRREAIDETALAVQRLGY---AQLRRLKPGSQPLLLPAPEGAAPVPVPIAAADGSVAVPPTDQRRALGAVHVCEHAECKLPAERFWESNGGNGGGKRALRRTQS 383          
BLAST of NO09G02710 vs. NCBI_GenBank
Match: XP_005648352.1 (DNA/RNA non-specific endonuclease, partial [Coccomyxa subellipsoidea C-169] >EIE23808.1 DNA/RNA non-specific endonuclease, partial [Coccomyxa subellipsoidea C-169])

HSP 1 Score: 230.3 bits (586), Expect = 1.100e-56
Identity = 117/231 (50.65%), Postives = 153/231 (66.23%), Query Frame = 0
Query:   61 GLPAFDTTYIFRENFVICYDSRTRNPKWVMERLTKQTCTGEADRRVVGFYEEDSIDPRFRSKNSDYLNSGYDRGHMASAANNRSSTQTMQETFSLANVSPQVGGGFNRDYWARVEKFTRDLTKHCDAVYLVSGPLFLPQRRDTIITSTSNTASKAKFIMTYELLGEAPSLVAVPTHFFKCVFAEMRNG--------RKVVAAFVLPNAPIHADVPLTRFLVPLANLEQAAG 284
            GLP+ +    F+ NFV+ +DSRTRNP+WV+E +T+    GE +R+ V FYE+ S+D RFRS+ SD+  SG+DRGHMA AAN++ +  TM ETF L+N SPQVG GFNRDYWAR E+F   LT+ CD VY+V+GPLFLP +            +   + M + ++G+ P +VAVPTHFFK V AE              ++ AFVLPNA + ADVPLT F VPL  LE+AAG
Sbjct:    4 GLPSSEGLRFFK-NFVLSFDSRTRNPRWVLEHITRAQTQGEGNRKNVEFYEDKSLDQRFRSRLSDFKESGFDRGHMAPAANHKETADTMLETFVLSNTSPQVGRGFNRDYWARFERFVNLLTRTCDDVYVVTGPLFLPSK------------TPLGYFMQHPMIGQPPRMVAVPTHFFKVVLAERATATPDEGSGTEAIMGAFVLPNALLQADVPLTAFSVPLEALEEAAG 221          
BLAST of NO09G02710 vs. NCBI_GenBank
Match: PSC75639.1 (Mitochondrial nuclease [Micractinium conductrix])

HSP 1 Score: 225.7 bits (574), Expect = 2.700e-55
Identity = 158/373 (42.36%), Postives = 217/373 (58.18%), Query Frame = 0
Query:   61 GLPAFDTTYIFRENFVICYDSRTRNPKWVMERLTKQTCTGEADRRVVGFYEEDS-IDPRFRSKNSDYLNSGYDRGHMASAANNRSSTQTMQETFSLANVSPQVGGGFNRDYWARVEKFTRDLTKHCDAVYLVSGPLFLPQRRDTIITSTSNTASKAKFIMTYELLGEAPSLVAVPTHFFKCVFAEMRNGRK-VVAAFVLPNAPIHADVPLTRFLVPLANLEQAAGFRMFAQALTEEEREEVDARVLGLRGVGAG-----NGGEEVRIEGMLTNGISDXXXXXXXXXXXXXXXXXXXXXXXXIKLNLDAPEHLCDVVLCQLPPEKFWQVNGNKKNREKRK--NRDDSGGVNAEKGEEWASPGFPSMVPSSWWSG 425
            G+P  D   +F  ++   +D+R RNP+WV+E +T      +   R    ++ED+ I+ RFRSK  D+  SG+DRGHMA AAN++ S   M +TF+L N+SPQVG GFNRDYWAR E+F +DL K CD V++V+GPL+LPQR     + T        + M + ++G  P L+AVP+H+FK V  E   GR+  V AFV+PNA I  +VPL  F VP+  LE+ AG R F   L++  RE VD   L ++ +GA        G   +   +     + XXXXXXXXXXXXXXXXXXXXXXXX +       H+C+   C+LP E+FW+ NG  K  + ++   R  SGG              P   PS+ W+G
Sbjct:   55 GMPVGDRLRLF-SDYAASFDTRLRNPRWVLEHVTAAGLAVKGGTRADSQFQEDAGIERRFRSKLEDFRGSGFDRGHMAPAANHKGSQAAMDDTFTLTNMSPQVGAGFNRDYWARFERFVQDLAKRCDDVWIVTGPLYLPQR-----SPTPQATGAPGYHMQHPMIGTPPQLMAVPSHYFKVVLGEYSGGRRAAVGAFVMPNAAIDPEVPLASFAVPIGALEEVAGLRFFPGYLSDVRREAVDETALVVQAIGASQLRRIKPGMPQQPPLLPAPAGATXXXXXXXXXXXXXXXXXXXXXXXXXQRRAAGAVHVCEHTECKLPAERFWESNGGGKGGKGKRELRRTSSGGFCGS-----LLTRNPGANPSTSWAG 416          
BLAST of NO09G02710 vs. NCBI_GenBank
Match: XP_011396372.1 (Nuclease C1 [Auxenochlorella protothecoides] >KFM23499.1 Nuclease C1 [Auxenochlorella protothecoides])

HSP 1 Score: 219.5 bits (558), Expect = 1.900e-53
Identity = 107/231 (46.32%), Postives = 149/231 (64.50%), Query Frame = 0
Query:   74 NFVICYDSRTRNPKWVMERLTKQTCTGEADRRVVGFYEEDSIDPRFRSKNSDYLNSGYDRGHMASAANNRSSTQTMQETFSLANVSPQVGGGFNRDYWARVEKFTRDLTKHCDAVYLVSGPLFLPQRRDTIITSTSNTASKAKFIMTYELLGEAPSLVAVPTHFFKCVFAEMRNGRKVVAAFVLPNAPIHADVPLTRFLVPLANLEQAAGFRMFAQALTEEEREEVDARVL 305
            NF+   D+R RNPKWV+E LT+    G+  R    F E+  +  RFR+K SDY  +GYDRGHMA A+N++ S  +M ETFSL+N++PQVGGGFNRDYWAR E+F +D TK  D V++V+GPL++P+               + +++ + +LG+ P +VAVPTHFFK V AE  +    VAAFV+PN+ I A+ PL+ F VPL +LE+ +G   F   L +  R  +DA  L
Sbjct:   10 NFIASIDTRLRNPKWVIEHLTRSKLKGDGTRSSSQFTEDAGVGARFRAKLSDYRGTGYDRGHMAPASNHKESQGSMDETFSLSNIAPQVGGGFNRDYWARFERFVQDTTKSFDDVWVVTGPLYIPR------------PGPSGWVLEHPMLGQPPQMVAVPTHFFKVVLAEQGDASTAVAAFVMPNSAIPAEYPLSAFSVPLTSLEEVSGLTFFPSLLDDARRMGLDAAAL 228          
BLAST of NO09G02710 vs. NCBI_GenBank
Match: GAX86243.1 (hypothetical protein CEUSTIGMA_g13656.t1 [Chlamydomonas eustigma])

HSP 1 Score: 219.2 bits (557), Expect = 2.500e-53
Identity = 127/338 (37.57%), Postives = 176/338 (52.07%), Query Frame = 0
Query:   73 ENFVICYDSRTRNPKWVMERLTKQTCTGEADRRVVGFYEEDSIDPRFRSKNSDYLNSGYDRGHMASAANNRSSTQTMQETFSLANVSPQVGGGFNRDYWARVEKFTRDLTKHCDAVYLVSGPLFLPQRRDTIITSTSNTASKAKFIMTYELLGEAPSLVAVPTHFFKCVFAEMRNG----RKV-VAAFVLPNAPIHADVPLTRFLVPLANLEQAAGFRMFAQALTEEEREEVDARVLGLRGVGAGNGGEEVRI--------------EGMLTNGISDXXXXXXXXXXXXXXXXXXXXXXXXIKLNLDAPEHLCDVV-LCQLPPEKFWQVNGNKKNREK 391
            +++   YD RTR PKWV+E +T +   G+A+R    F+E++ IDP FR+    Y +SGYDRGHMA A +N+SS + + ETFSL N+ PQVG GFNRDYW R E++ RDLTK    VY+V+GPL++P+                K+ M + ++G+ P L+AVPTHF+K + A+ R G    R+V V AFV+PNAPI   +PLT F VPL  LEQ AG R F   +    R  +D   L  R  G        R+              + +LT+G S                            ++    HLC++   C+LPP   WQ N     + K
Sbjct:   66 DSYAASYDPRTRTPKWVLEHITAKDLEGDANRNKSQFFEDNQIDPAFRATLESYKDSGYDRGHMAPAGDNKSSQKALNETFSLTNICPQVGLGFNRDYWERFERYVRDLTKKAGDVYVVTGPLWIPK-----------PDVDGKWNMQHPMIGQPPGLIAVPTHFYKVILADGRRGKGSSREVGVGAFVMPNAPIDPQLPLTAFTVPLEPLEQLAGMRFFPNFINATRRSAMDQAALAWRQYGMQQLKPFDRVSLCQDMAALPAPSGQLLLTSGSSSPSSNAAMSSTSSMTAVPEHQISVPKTRSVAGTTHLCEIAGGCKLPPPGSWQKNQQSNKQLK 392          
BLAST of NO09G02710 vs. NCBI_GenBank
Match: GAX85438.1 (hypothetical protein CEUSTIGMA_g12854.t1 [Chlamydomonas eustigma])

HSP 1 Score: 219.2 bits (557), Expect = 2.500e-53
Identity = 127/338 (37.57%), Postives = 176/338 (52.07%), Query Frame = 0
Query:   73 ENFVICYDSRTRNPKWVMERLTKQTCTGEADRRVVGFYEEDSIDPRFRSKNSDYLNSGYDRGHMASAANNRSSTQTMQETFSLANVSPQVGGGFNRDYWARVEKFTRDLTKHCDAVYLVSGPLFLPQRRDTIITSTSNTASKAKFIMTYELLGEAPSLVAVPTHFFKCVFAEMRNG----RKV-VAAFVLPNAPIHADVPLTRFLVPLANLEQAAGFRMFAQALTEEEREEVDARVLGLRGVGAGNGGEEVRI--------------EGMLTNGISDXXXXXXXXXXXXXXXXXXXXXXXXIKLNLDAPEHLCDVV-LCQLPPEKFWQVNGNKKNREK 391
            +++   YD RTR PKWV+E +T +   G+A+R    F+E++ IDP FR+    Y +SGYDRGHMA A +N+SS + + ETFSL N+ PQVG GFNRDYW R E++ RDLTK    VY+V+GPL++P+                K+ M + ++G+ P L+AVPTHF+K + A+ R G    R+V V AFV+PNAPI   +PLT F VPL  LEQ AG R F   +    R  +D   L  R  G        R+              + +LT+G S                            ++    HLC++   C+LPP   WQ N     + K
Sbjct:    9 DSYAASYDPRTRTPKWVLEHITAKDLEGDANRNKSQFFEDNQIDPAFRATLESYKDSGYDRGHMAPAGDNKSSQKALNETFSLTNICPQVGLGFNRDYWERFERYVRDLTKKAGDVYVVTGPLWIPK-----------PDVDGKWNMQHPMIGQPPGLIAVPTHFYKVILADGRRGKGSSREVGVGAFVMPNAPIDPQLPLTAFTVPLEPLEQLAGMRFFPNFINATRRSAMDQAALAWRQYGMQQLKPFDRVSLCQDMAALPAPSGQLLLTSGSSSPSSNAAMSITSSMTAVPEHQISVPKTRSVAGTTHLCEIAGGCKLPPPGSWQKNQQSNKQLK 335          
BLAST of NO09G02710 vs. NCBI_GenBank
Match: KDD73679.1 (DNA/RNA non-specific endonuclease [Helicosporidium sp. ATCC 50920])

HSP 1 Score: 216.9 bits (551), Expect = 1.300e-52
Identity = 132/344 (38.37%), Postives = 185/344 (53.78%), Query Frame = 0
Query:   62 LPAFDTTYIFRENFVICYDSRTRNPKWVMERLTKQTCTGEADRRVVGFYEEDSIDPRFRSKNSDYLNSGYDRGHMASAANNRSSTQTMQETFSLANVSPQVGGGFNRDYWARVEKFTRDLTKHCDAVYLVSGPLFLPQRRDTIITSTSNTASKAK-FIMTYELLGEAPSLVAVPTHFFKCVFAEMR--NGRK---VVAAFVLPNAPIHADVPLTRFLVPLANLEQAAGFRMFAQALTEEEREEVDARVLGLRGVGAG---NGGEE---VRIEGMLTNGISDXXXXXXXXXXXXXXXXXXXXXXXXIKLNLDAPEHLCDVVLCQLPPEKFWQVNGNKKNREKRKN 394
            +P  D   +F + +    D R RNP+WV+E LT  +  G   R    F E++ I+PRFR++ SDY  SGYDRGHMA A+N+++S Q M  TF+L+N  PQVG GFNRDYWAR E++ +  TK  D V++V+GPL+LP+            A  AK ++M + +LG+AP L+AVPTHFFK + AE +   G+K     AAFV+PN PI    P+T + VPL+ LE+AAG   F + + + ER  VDA  L  +  G      GGE+   V +EG ++                                      H+CD V C LP ++FW+     KN    K+
Sbjct:    1 MPLGDRLRVF-DRYASLVDVRLRNPRWVIEHLTAASLQGAGSRGNSQFVEDEGIEPRFRARLSDYRGSGYDRGHMAPASNHKASQQAMDATFTLSNTCPQVGEGFNRDYWARFERWVQSCTKQYDDVWVVTGPLYLPR----------PVAPGAKDWVMQHPMLGQAPHLMAVPTHFFKLILAEKKETGGKKSTVAAAAFVMPNCPIAESDPMTAYAVPLSALEEAAGLVFFPKLIGDAERGTVDAAALLWQARGRKALLQGGEKHQPVLLEGPVSRNALPPAKGKAAAGRPTTPIG-----------------HMCDSVSCVLPAKEFWKTTKTVKNPRSSKS 316          
BLAST of NO09G02710 vs. NCBI_GenBank
Match: PNW79681.1 (hypothetical protein CHLRE_08g362750v5 [Chlamydomonas reinhardtii])

HSP 1 Score: 211.5 bits (537), Expect = 5.300e-51
Identity = 114/279 (40.86%), Postives = 157/279 (56.27%), Query Frame = 0
Query:   61 GLPAFDTTYIFRENFVICYDSRTRNPKWVMERLTKQTCTGEADRRVVGFYEEDSIDPRFRSKNSDYLNSGYDRGHMASAANNRSSTQTMQETFSLANVSPQVGGGFNRDYWARVEKFTRDLTKHCDAVYLVSGPLFLPQRRD--------TIITSTSNTASKAKFIMTYELLGEAPSLVAVPTHFFKCVFAEMR--------------------NGRKVVAAFVLPNAPIHADVPLTRFLVPLANLEQAAGFRMFAQALTEEEREE-VDARVLGLRGVG 311
            G+P  D   ++ + +V  YD RTRNPKWV E +T  + +GEA+R    F+ +  +DPRF +K SD+  SGYDRGHMA AAN++ S + M +TFSL N+SPQ G GFNRDYWAR E+F ++LT     VY+++GPL+LP ++                     +K+ +T++ +G+ P LVAVPTH++K V A+ R                     G   V AFV+PNAPI    PL  ++VPL +LEQ AG   F   L +  R E  D    G R  G
Sbjct:   49 GVPETDIIRVY-DGYVAAYDYRTRNPKWVAEHITPASWSGEANRERSEFFPDPEVDPRFGAKLSDFRGSGYDRGHMAPAANHKDSQKAMDQTFSLVNISPQAGKGFNRDYWARFERFVKELTDVAGDVYVITGPLWLPTQQQLEGAAXXXXXXXXXXXXXXTSKWTLTHDWIGKPPGLVAVPTHYYKVVLADTRGDNNSAAGKQPLRGNKQPLPRGTVGVGAFVMPNAPIDPRTPLAAYVVPLEDLEQVAGTSFFPALLGDSRRREAADVAAAGWRAAG 326          
BLAST of NO09G02710 vs. NCBI_GenBank
Match: XP_022838318.1 (DNA/RNA non-specific endonuclease, active site [Ostreococcus tauri] >CEF96823.1 DNA/RNA non-specific endonuclease, active site [Ostreococcus tauri])

HSP 1 Score: 206.5 bits (524), Expect = 1.700e-49
Identity = 109/262 (41.60%), Postives = 161/262 (61.45%), Query Frame = 0
Query:   55 HKWSHVGLPAFDTTYIF--RENFVICYDSRTRNPKWVMERLTKQTCTGEADRRVVGFYEEDSIDPRFRSKNSDYLNSGYDRGHMASAANNRSSTQTMQETFSLANVSPQVGGGFNRDYWARVEKFTRD--LTKHCDAVYLVSGPLFLPQRRDTIITSTSNTASKA------------KFIMTYELLGEAPSLVAVPTHFFKCVFAEMRNGRKVVAAFVLPNAPIHADVPLTRFLVPLANLEQAAGFRMFAQALTEEEREEVD 301
            H+    G P  DT+ +   + ++V  +D RTRNP+WVME +T++T  G   R+   F E++++  + RS+ +DY  SGYDRGH+ +AA+ + S + M  TF+L+NVSPQVG GFNRDYWA++E+F RD        A Y+ +GPLFL  R ++    + + +++A             + M + +LGE P+L+AVPTHFFK VF E  + R   AAFVLPN+ I  +VPL RF+VPL +LE  +G   F + L  E+R   +
Sbjct:   88 HEAMRHGWP-LDTSSVIHQKSSYVHAFDGRTRNPRWVMEVITRETVGGSGSRKRSDFAEDEAVSWKHRSRLADYRGSGYDRGHLVAAADQKGSQEDMDATFALSNVSPQVGEGFNRDYWAKLEQFVRDEACADGTKAAYVATGPLFLASRSESADAESFDASARAVDHANVGAPRPTVWEMRHPMLGEPPALMAVPTHFFKVVFVEGEDSRVSCAAFVLPNSSIPKNVPLRRFVVPLTDLEIVSGLEFFRRGLAGEDRRRYE 348          
The following BLAST results are available for this feature:
BLAST of NO09G02710 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27523.12.000e-11965.12dna rna non-specific nuclease [Nannochloropsis gad... [more]
PRW44603.11.000e-5737.85mitochondrial nuclease [Chlorella sorokiniana][more]
XP_005648352.11.100e-5650.65DNA/RNA non-specific endonuclease, partial [Coccom... [more]
PSC75639.12.700e-5542.36Mitochondrial nuclease [Micractinium conductrix][more]
XP_011396372.11.900e-5346.32Nuclease C1 [Auxenochlorella protothecoides] >KFM2... [more]
GAX86243.12.500e-5337.57hypothetical protein CEUSTIGMA_g13656.t1 [Chlamydo... [more]
GAX85438.12.500e-5337.57hypothetical protein CEUSTIGMA_g12854.t1 [Chlamydo... [more]
KDD73679.11.300e-5238.37DNA/RNA non-specific endonuclease [Helicosporidium... [more]
PNW79681.15.300e-5140.86hypothetical protein CHLRE_08g362750v5 [Chlamydomo... [more]
XP_022838318.11.700e-4941.60DNA/RNA non-specific endonuclease, active site [Os... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL120nonsL120Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR022ncniR022Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR021ncniR021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR129ngnoR129Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G02710.1NO09G02710.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|19309gene_4275Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100101g17gene3033Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G02710.1NO09G02710.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G02710 ID=NO09G02710|Name=NO09G02710|organism=Nannochloropsis oceanica|type=gene|length=3637bp
ATGCCACTCTCACAAGTTTTGCTTTTGTTTGATATATGTTTGTCCTCTGT
TCTTGCTTATTACTGTGCTTTAGGCTTTGCCATTATCCAGTTCACCAGAA
TTGACCCAAATAGACGGATAATCCTACCCTCCCTCAGACCCCTATCCTAG
ACGTAAAGAGGTAAACTGACCAAGGCATCGATGTACGGAATGATAACAAC
GCGCGTAAGCAAATAAAACAGCACGCCGAGGCCAATCGAAATCGGCAATG
CCGGCAGCGCCTTTCGAAAGACACTCAGCAACACAAGTGTTGCGCCCAAG
CCCGAAATAATGACGAGGAAACAGGCCGCGCAAGTCGCAAACCCATACAA
AGCCGCCTTGCCCACCAGAACACTGTAAAAAACAAAATCCCCCAAGCCCA
GCTTAATGCTTCGCTCCTCCGGCGCTCCTCTTCCTCCGTGGTGCTCCTGC
GAGGAGGACGACGATAAAGGATAGTCAGCCGTGCCACTGTTTCCGCCCAC
CCCTCCATTTCCTCGTTCGCCACTACCCTCCGCATCCCCCTCCTCCTGTG
GAGTACCCCCTACTTCGAGCAAGCTAGAATTGATCCGACCTCCCCGCAAC
TGCTGTTGTTGTTGTTTGTGTGGCTGTTGCTGCTGCTGATGGTGACGGTG
GCGACGGTCGAGATGATCTCCACCCGGGCTGCTGTGCGAACTGTCCAACA
GCGGATCGAGAGGAGAAGGCGGATTGTTGCAATGCAAGCTGCTCGCCGGG
CCCGAAGGTATCAACGCCGCAGGCCCCCCATCTTCCCTACTCACATCGCG
CACAGGCGTCTGTAGATCCGTTCTTTGCATTCCTTCCACCCTTGTGTCTG
CTGCTACTGCTATTCCTCCTGTCCTCCCAACGAGTGGAGGCGGCACCCTG
TGATGGTGCCGTGCATGAGCAGGCAACTCCGCCTCGTAGAGCAGACCAGG
CATGGTAGGAGCGTCGCGCTCTTGCATCAACCCTACCAAATACTTCAATG
GTCCACAGGGTGTAAGCACGGCACATAAATCATACAGGGCCAAGACCACC
AACAAGGCCCAGCCTGTCCATTCCTCGAACCTCGACAACTGCCAGGCCAT
TATCACAGAAATCATAACCAAATACCCTTGGGTCACCCAGGTTGGGATCC
CCTTCTGATAAAATATGGCAGCCACGCCGACAAAAGCGAAATTGTACAGA
ACAGCGACAAATGTGAAGTAATCACATGGCAAATCCCATCGTATCAAAGC
CGTGTACCACAACAACCCCCCATCAGCCCCAACAGCATCGTGCTACTAAA
CGCCATGTATCCAAACAAGCACTTCATGCACCGAAACTTATAAAGCAACA
CCACCAGAATGGTCGCCCCACAAATAACCCCAACTATGGTCAAAGCATTG
ATGAGTGACTTGCCGAGCTTGACGGAATTGCTGTCCCCCCCATTCCCGTC
TGCGTCCCCGTCGTTTATCGCATATACACTCACTCCTTGGTCTTCCGTCG
CAAATTCCACATTCACCACCACCAGGCTCGCTAGAAACATGGTCAAGGCC
ACGGGCTTCAGGACTGCCCAGAAGGAGTTGGCAGAGTACAGGACGTCCTC
AATGTCGAGGCCGTCGGGTTGTGTGTGAGCCGGGTCACGGGAAGGAGTTG
AGGTACGCTCGTCGCTGCTGCTACTGTCGAAGGAAGTCGGTGGTGGCGGG
AAAGGGGCAGGCAGCGGGGGAGGTGCTGGTCGTGCCATGGCTATCGCTGT
GTTTTAGTTTGGGCAGGTTGAAGCTTATGTGGGGTGGCAGGGGTGAAAGT
GTAAAAACATGGGCACGATGCAAGCATCGCTGAACAGGGTATACAGCTTC
CGAGATTGCGTCAACGCCAACAACGCCAACAATAGGGCGTTACATAGACA
CTCAACTGGCACAGAAACACAAACAGACAGGTTGTTGTTGGCCTGTGTAG
TTTGCGTACAGAGGGCAGGCACATTTGGGTTCAAAAGCAGGAGAGAGACT
TTGGCATCATCCACGCgtacgtgtcgacatcccctccctctccgcacaaa
acaactaatacatgcaaaatcacagGTGCACAATGGCAGCTTTTTTTACG
CGTGCACGACGACGATCCTCGACAATAGCGGCTTCCATCGTGGCCGGTAG
TTCGTCGATTCTTCTGACTTCGATGCTCACCCACGACGACCAGGATGCTG
CAGGATTTGTAGCCCACGCCCAAGCCCACCAAGCAAACGATCTCCACAAA
TGGTCCCACGTCGGGCTGCCTGCCTTCGACACAACTTACATTTTTCGAGA
AAACTTTGTCATCTGTTACGACTCCCGCACGCGGAATCCGAAATGGGTAA
TGGAACGCCTGACCAAACAAACATGCACGGGGGAGGCGGACCGTCGCGTG
GTGGGGTTCTACGAGGAGGACAGCATCGATCCTCGCTTTCGCAGCAAAAA
TAGCGACTACCTGAATTCAGGGTATGATCGTGGACATATGGCATCAGCAG
CCAACAACAGAAGCTCGACACAGACCATGCAAGAAACGTTTTCCCTCGCG
AATGTGTCGCCGCAGGTCGGCGGGGGATTCAATCGAGATTATTGGGCTAG
gtttgtgcgggttgagaagaaaatgagaagaatagaaatagggaacagtg
gatagctatatttttcccccattttgaatagtgacattcagcaaagcaaa
tcattcactccccctcgttgcgtccttcctcccaccccccagAGTCGAGA
AATTTACGAGGGATCTGACCAAGCATTGCGACGCTGTCTACCTCGTCTCT
GGTCCTCTATTTCTCCCCCAGCGACGCGATACCATCATCACCAGCACCTC
CAATACAGCTTCCAAAGCCAAATTCATCATGACCTATGAATTGCTGGGAG
AGGCCCCCAGCCTCGTGGCGGTCCCCACGCACTTCTTCAAATGTGTGTTT
GCCGAGATGCGGAATGGCCGAAAAGTCGTCGCTGCTTTTGTCTTGCCCAA
TGCACCCATACACGCTGACGTGCCTTTGACAAGGTTTTTGGTTCCGCTGG
CAAATCTGGAGCAGGCGGCAGGCTTCCGAATGTTTGCCCAGGCTCTGACA
GAGGAGGAGCGGGAGGAGGTGGATGCACGAGTCCTCGGTCTGAGAGGAGT
TGGTGCAGGAAATGGAGGCGAGGAGGTAAGGATTGAGGGCATGTTGACGA
ATGGCATATCGGACGATGCGTTGGTAGTACGTCGTGGTGGCCGTGAAGGA
GGAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGGATAAAGCTGAATCT
CGATGCGCCTGAGCATCTGTGTGATGTTGTGTTATGCCAATTACCTCCGG
AAAAATTTTGGCAGGTGAATGGAAATAAAAAAAACAGGGAAAAGAGGAAG
AATAGAGATGATTCTGGTGGTGTTAATGCTGAAAAGGGTGAAGAGTGGGC
GTCGCCGGGTTTCCCCTCCATGGTCCCCTCATCGTGGTGGTCGGGAGGAA
GGACAGCGTAAAAAATGGACACTTAAGCTCACGGCCTGAATGAAAAGCTT
TGAAAAAGATCTCTCATTAATGATCAATGCGAGACTCTAAGATGAAGAAT
TGTATGATCAAAAATTATCCAAAATTATTACATCACC
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protein sequence of NO09G02710.1

>NO09G02710.1-protein ID=NO09G02710.1-protein|Name=NO09G02710.1|organism=Nannochloropsis oceanica|type=polypeptide|length=429bp
MAAFFTRARRRSSTIAASIVAGSSSILLTSMLTHDDQDAAGFVAHAQAHQ
ANDLHKWSHVGLPAFDTTYIFRENFVICYDSRTRNPKWVMERLTKQTCTG
EADRRVVGFYEEDSIDPRFRSKNSDYLNSGYDRGHMASAANNRSSTQTMQ
ETFSLANVSPQVGGGFNRDYWARVEKFTRDLTKHCDAVYLVSGPLFLPQR
RDTIITSTSNTASKAKFIMTYELLGEAPSLVAVPTHFFKCVFAEMRNGRK
VVAAFVLPNAPIHADVPLTRFLVPLANLEQAAGFRMFAQALTEEEREEVD
ARVLGLRGVGAGNGGEEVRIEGMLTNGISDDALVVRRGGREGGGGRGGGG
GGGGIKLNLDAPEHLCDVVLCQLPPEKFWQVNGNKKNREKRKNRDDSGGV
NAEKGEEWASPGFPSMVPSSWWSGGRTA*
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Synonyms
Publications