NO09G02510, NO09G02510 (gene) Nannochloropsis oceanica

Overview
NameNO09G02510
Unique NameNO09G02510
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length582
Alignment locationchr9:749944..750525 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:749944..750525 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_dom
IPR008906HATC_dom_C
Homology
The following BLAST results are available for this feature:
BLAST of NO09G02510 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL122nonsL122Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL120nonsL120Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR021ncniR021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR129ngnoR129Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G02510.1NO09G02510.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G02510.1NO09G02510.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G02510 ID=NO09G02510|Name=NO09G02510|organism=Nannochloropsis oceanica|type=gene|length=582bp
ATGACCTCGTACGCATGGGCCAGGGCGAAACTGGATGAGTATTTTGATTG
GTGCGGGGGGAAGGGGGACAAAGTCGACATTGCGAAAAAAATGCAGTGGA
AAGACATCTCCAGCTGGTGGCTCACGACAGGGAGCGGCATGTTCCCTGAA
CTTGCTCAGATCTTTCAAGCTCTCCTCTCCATGCCTGGTGGTGCCGCGTC
GCTCGAGCGAGACTTCAGCATTGCGAGCAACGTATTGACCGTGCACCGCG
CCCAGCTAGATCAGGCATTTGTGGAGATGACCATGCTTCTAAACATGAAC
ATAGACAAAATTCCGCCCCTCTCCGACATCCGGGAGCTGACTGTTACGGA
GGCGAAAGAAGCCATGCCACGACGACTGCGGAACAAGGAGGACTTTCAGA
AGTTTCTTCATTTGGATGAGTCTGTGGCGAAGGAGGGGGAGAAGGAAGAC
GACGCCGAGGCCGAGGAGAAAGATAAACAGGCGACGGAAACAACAAGGTA
TGGAGCCAATGATGGTGCAGATGATGATGAAATTGACGACGGTTATGATG
ATAATGATGATGACGATGATGGTGATGCGTAA
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protein sequence of NO09G02510.1

>NO09G02510.1-protein ID=NO09G02510.1-protein|Name=NO09G02510.1|organism=Nannochloropsis oceanica|type=polypeptide|length=194bp
MTSYAWARAKLDEYFDWCGGKGDKVDIAKKMQWKDISSWWLTTGSGMFPE
LAQIFQALLSMPGGAASLERDFSIASNVLTVHRAQLDQAFVEMTMLLNMN
IDKIPPLSDIRELTVTEAKEAMPRRLRNKEDFQKFLHLDESVAKEGEKED
DAEAEEKDKQATETTRYGANDGADDDEIDDGYDDNDDDDDGDA*
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Synonyms
Publications