NO09G02400, NO09G02400 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO09G02400 vs. NCBI_GenBank
Match: EWM27579.1 (50s ribosomal protein l25 general stress protein ctc [Nannochloropsis gaditana]) HSP 1 Score: 367.1 bits (941), Expect = 5.700e-98 Identity = 181/247 (73.28%), Postives = 207/247 (83.81%), Query Frame = 0 Query: 67 SSRSGSSAADSNEGA----SKKYVSPHNWMALVRDYGKSDAVVGDAPMEIQTIQATARTPQETGSRYSQRAREKGHLPGVLYGPGVDGDKERHLITVERREIEKQMRRLGDSIASTVFDLQLGQYKQRVLIRDLDRDPGTALPIAVNFLRYRPGYPVEVPVCFVNEDLCLPLKRGGMLLSINRFIRVSCEGETLPEMLMVDMTGVRNNQKVGLERVHFPSNVQPYEVSESFVLGVVKGKNVAGTPGG 310 SS S+ +EG + K S H+W ALVRDYGKSDAV PME+ TI+AT R +TGSRYS+R RE+G LPGVLYGPGVDGDKER+LITV+RR+IE+ MRRLGDSIASTVFDLQLG YKQRVLIRDLDRDPGTA+PIAVNFLRYRPGYPV+VPVCF+NE+LCLPLKRGGMLLSINRFIRVSCEGETLPEML+VD+TG ++ QK+GLERV FP +VQP+EV E FVLGVVKGKN+ + G Sbjct: 67 SSSVCSAVGGGSEGGVSHKTDKVSSSHDWAALVRDYGKSDAVSSSIPMEVPTIEATVRCLDDTGSRYSRRLREEGKLPGVLYGPGVDGDKERYLITVKRRDIERHMRRLGDSIASTVFDLQLGDYKQRVLIRDLDRDPGTAMPIAVNFLRYRPGYPVKVPVCFINEELCLPLKRGGMLLSINRFIRVSCEGETLPEMLLVDLTGAKSGQKIGLERVTFPPSVQPHEVQEDFVLGVVKGKNIVTSEVG 313
BLAST of NO09G02400 vs. NCBI_GenBank
Match: OQS03227.1 (50S ribosomal protein L25 [Thraustotheca clavata]) HSP 1 Score: 142.5 bits (358), Expect = 2.300e-30 Identity = 69/177 (38.98%), Postives = 111/177 (62.71%), Query Frame = 0 Query: 126 GSRYSQRAREKGHLPGVLYGPGVDGDKERHLITVERREIEKQMRRLGDSIASTVFDLQLGQYK-QRVLIRDLDRDPGTALPIAVNFLRYRPGYPVEVPVCFVNEDLCLPLKRGGMLLSINRFIRVSCEGETLPEMLMVDMTGVRNNQKVGLERVHFPSNVQPYEVSESFVLGVVKGK 302 GSR S+R R G LPG+LYG G DG+ + L+++ + + E++ R+L +S+ + V+++ +G K +VL+RD+ P T +P+ VNFLR++PG V +P+ F+NE+ LKRGG + ++ I + ET+P L VD+ G+ Q++ LE + FP NV P V E V+ + GK Sbjct: 39 GSRESRRLRRSGLLPGILYGEGSDGENSKVLVSMNQTDFEREYRKLRNSMGNQVYEVAIGDAKPTKVLLRDITLHPVTDVPLTVNFLRFKPGRTVHIPLAFLNEETSPGLKRGGYINNVRHEIPCKIDTETIPTTLDVDVNGMHVGQRIYLENITFPENVTPL-VKERSVIATIAGK 214
BLAST of NO09G02400 vs. NCBI_GenBank
Match: XP_008913558.1 (ribosomal protein L25, Ctc-form [Phytophthora parasitica INRA-310] >ETI34755.1 ribosomal protein L25, Ctc-form [Phytophthora parasitica P1569] >ETK75052.1 ribosomal protein L25, Ctc-form [Phytophthora parasitica] >ETL28473.1 ribosomal protein L25, Ctc-form [Phytophthora parasitica] >ETL81728.1 ribosomal protein L25, Ctc-form [Phytophthora parasitica] >ETM34934.1 ribosomal protein L25, Ctc-form [Phytophthora parasitica] >ETN01231.1 ribosomal protein L25, Ctc-form [Phytophthora parasitica INRA-310] >ETO63508.1 ribosomal protein L25, Ctc-form [Phytophthora parasitica P1976] >ETP04606.1 ribosomal protein L25, Ctc-form [Phytophthora parasitica CJ01A1] >ETP32743.1 ribosomal protein L25, Ctc-form [Phytophthora parasitica P10297] >KUF82230.1 50S ribosomal protein L25 [Phytophthora nicotianae] >KUF87898.1 hypothetical protein AM588_10005241 [Phytophthora nicotianae]) HSP 1 Score: 134.0 bits (336), Expect = 8.100e-28 Identity = 70/177 (39.55%), Postives = 106/177 (59.89%), Query Frame = 0 Query: 126 GSRYSQRAREKGHLPGVLYGPGVDGDKERHLITVERREIEKQMRRLGDSIASTVFDLQL-GQYKQRVLIRDLDRDPGTALPIAVNFLRYRPGYPVEVPVCFVNEDLCLPLKRGGMLLSINRFIRVSCEGETLPEMLMVDMTGVRNNQKVGLERVHFPSNVQPYEVSESFVLGVVKGK 302 GSR S+R R++G LPGVLYG G DG ER L++ R E++ R+L SI + VF +Q+ GQ + +RD+ DP T +P+AVNFLRY+PG V +P+ ++NE+ LKRGG + I + + + +P L +D+ G+ KV LE + FP V P + E ++ + G+ Sbjct: 42 GSRASRRLRKQGLLPGVLYGEGEDGKDERVLVSFPTRAFEREHRKLWTSIENQVFHVQVGGQAPVKAYMRDVQLDPVTDVPLAVNFLRYKPGRTVSIPITYLNEEGSPGLKRGGFINHIYHSLDCTISTDKIPTTLQIDVNGLHVGDKVYLESIKFPEGVVP-NIPEGSLVAKIAGR 217
BLAST of NO09G02400 vs. NCBI_GenBank
Match: XP_012198586.1 (hypothetical protein SPRG_04795 [Saprolegnia parasitica CBS 223.65] >KDO30892.1 hypothetical protein SPRG_04795 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 133.3 bits (334), Expect = 1.400e-27 Identity = 63/177 (35.59%), Postives = 111/177 (62.71%), Query Frame = 0 Query: 126 GSRYSQRAREKGHLPGVLYGPGVDGDKERHLITVERREIEKQMRRLGDSIASTVFDLQLGQ-YKQRVLIRDLDRDPGTALPIAVNFLRYRPGYPVEVPVCFVNEDLCLPLKRGGMLLSINRFIRVSCEGETLPEMLMVDMTGVRNNQKVGLERVHFPSNVQPYEVSESFVLGVVKGK 302 GSR S+R R G LPG+LYG G G+K + L+T+++ + E++ R+L S+A+ V+++ +G+ +VL+RD+ P T +P+ VNFLR++PG V +P+ F+N++ LKRGG + ++ I + +P L VD+ G+ +++ LE + FP +++P V+ V+ + GK Sbjct: 38 GSRESRRLRRGGQLPGILYGEGSTGEKTKVLVTMDQTDFEREYRKLRSSMANQVYEVSVGESAPTKVLLRDITLHPVTDVPLTVNFLRFKPGRTVHIPLDFLNQEGSPGLKRGGYINNVRHDIPCKVNSDVIPSTLDVDVNGMHVGERIYLENITFPEHIEPL-VAPRAVIATIAGK 213
BLAST of NO09G02400 vs. NCBI_GenBank
Match: OQR96746.1 (50S ribosomal protein L25 [Achlya hypogyna]) HSP 1 Score: 133.3 bits (334), Expect = 1.400e-27 Identity = 65/178 (36.52%), Postives = 112/178 (62.92%), Query Frame = 0 Query: 126 GSRYSQRAREKGHLPGVLYGPGVDGDKERHLITVERREIEKQMRRLGDSIASTVFDLQLGQ--YKQRVLIRDLDRDPGTALPIAVNFLRYRPGYPVEVPVCFVNEDLCLPLKRGGMLLSINRFIRVSCEGETLPEMLMVDMTGVRNNQKVGLERVHFPSNVQPYEVSESFVLGVVKGK 302 GSR S+R R +G LPG+LYG G DG+K + L+++ + + E++ R+L S+A+ V+++ +G K +VL+RD+ P T +P+ VNFLR++PG V +P+ F+N++ LKRGG + ++ I + + +P L VD+ G+ ++ LE + FP NV P +++ V+ + GK Sbjct: 33 GSRDSRRLRREGQLPGILYGEGSDGEKSKVLVSLAQTDFEREYRKLRTSMANQVYEVAVGDDGAKTKVLLRDITLHPVTDVPLTVNFLRFKPGRTVYIPLDFLNQESSPGLKRGGYINNVRHDIPCTVNTDEIPTTLDVDVNGMHVGARIYLENITFPENVVP-QIAPRAVVATIAGK 209
BLAST of NO09G02400 vs. NCBI_GenBank
Match: XP_008611756.1 (hypothetical protein SDRG_07684 [Saprolegnia diclina VS20] >EQC34884.1 hypothetical protein SDRG_07684 [Saprolegnia diclina VS20]) HSP 1 Score: 132.9 bits (333), Expect = 1.800e-27 Identity = 63/177 (35.59%), Postives = 111/177 (62.71%), Query Frame = 0 Query: 126 GSRYSQRAREKGHLPGVLYGPGVDGDKERHLITVERREIEKQMRRLGDSIASTVFDLQLGQ-YKQRVLIRDLDRDPGTALPIAVNFLRYRPGYPVEVPVCFVNEDLCLPLKRGGMLLSINRFIRVSCEGETLPEMLMVDMTGVRNNQKVGLERVHFPSNVQPYEVSESFVLGVVKGK 302 GSR S+R R G LPG+LYG G G+K + L+T+++ + E++ R+L S+A+ V+++ +G+ +VL+RD+ P T +P+ VNFLR++PG V +P+ F+N++ LKRGG + ++ I + +P L VD+ G+ +++ LE + FP +++P V+ V+ + GK Sbjct: 38 GSRESRRLRRGGQLPGILYGEGSTGEKTKVLVTMDQTDFEREYRKLRSSMANQVYEVSVGESAPTKVLLRDITLHPVTDVPLTVNFLRFKPGRTVHIPLDFLNQEGSPGLKRGGYINNVRHDIPCKVNADDIPSTLDVDVNGMHVGERIYLENITFPEHIEPL-VAPRAVIATIAGK 213
BLAST of NO09G02400 vs. NCBI_GenBank
Match: XP_002996999.1 (50S ribosomal protein L25, putative [Phytophthora infestans T30-4] >EEY70240.1 50S ribosomal protein L25, putative [Phytophthora infestans T30-4]) HSP 1 Score: 132.9 bits (333), Expect = 1.800e-27 Identity = 76/218 (34.86%), Postives = 123/218 (56.42%), Query Frame = 0 Query: 101 SDAVVGDAPMEIQTIQATARTPQETGSRYSQRAREKGHLPGVLYGPGVDGDKERHLITVERREIEKQMRRLGDSIASTVFDLQLGQYKQ-RVLIRDLDRDPGTALPIAVNFLRYRPGYPVEVPVCFVNEDLCLPLKRGGMLLSINRFIRVSCEGETLPEMLMVDMTGVRNNQKVGLERVHFPSNVQPYEVSESFVLGVVKGKNVAGTPGGPDSVADEV 318 S A + + +Q R + GSR S+R R+KG LPGVLYG G +G ER L+++ R E++ R+L SI + VF +Q+G + + +RD+ DP T +P+AVNFLR++PG V +P+ ++NE+ LKRGG + I+ + + + +P L +D+ G+ KV LE + FP V P + E ++ + G+ G ++V D+V Sbjct: 19 SAAAAANQEVSSNVLQLVVR--EGEGSRASRRLRKKGLLPGVLYGEGEEGKDERMLVSLPTRAFEREHRKLWTSIENQVFHVQVGDHPPVKAYMRDVQLDPVTDVPLAVNFLRFKPGRTVSIPITYLNEEGSPGLKRGGFINHIHHSLDCTIFTDKIPITLQIDVNGLHVGDKVYLESIKFPEGVVP-NIPEGSLVAKIAGRR--GLIPRVEAVVDDV 231
BLAST of NO09G02400 vs. NCBI_GenBank
Match: XP_009516750.1 (hypothetical protein PHYSODRAFT_468557 [Phytophthora sojae] >EGZ29475.1 hypothetical protein PHYSODRAFT_468557 [Phytophthora sojae]) HSP 1 Score: 131.0 bits (328), Expect = 6.800e-27 Identity = 68/177 (38.42%), Postives = 105/177 (59.32%), Query Frame = 0 Query: 126 GSRYSQRAREKGHLPGVLYGPGVDGDKERHLITVERREIEKQMRRLGDSIASTVFDLQL-GQYKQRVLIRDLDRDPGTALPIAVNFLRYRPGYPVEVPVCFVNEDLCLPLKRGGMLLSINRFIRVSCEGETLPEMLMVDMTGVRNNQKVGLERVHFPSNVQPYEVSESFVLGVVKGK 302 GSR S+R R++G LPGVLYG G DG ER L++ R E+ R+L SI + VF +Q+ Q + +RD+ DP T +P+AVNFLR++PG V +P+ ++NE+ LKRGG + I+ + S + +P L +D+ G+ KV L+ + FP V P + E ++ + G+ Sbjct: 45 GSRASRRLRKQGFLPGVLYGEGEDGKDERVLVSFPTRTFERMHRKLWTSIENQVFQVQVDDQPPVKAYMRDVQLDPVTDVPVAVNFLRFKPGRKVSIPITYLNEEGSPGLKRGGFINHIHHSLECSIFTDDIPTTLQIDVNGLHVGDKVYLDAIKFPEGVVP-NIPEGSLVAKIAGR 220
BLAST of NO09G02400 vs. NCBI_GenBank
Match: OWZ15166.1 (Ribosomal protein L25, Ctc-form [Phytophthora megakarya]) HSP 1 Score: 131.0 bits (328), Expect = 6.800e-27 Identity = 75/210 (35.71%), Postives = 117/210 (55.71%), Query Frame = 0 Query: 93 ALVRDYGKSDAVVGDAPMEIQTIQATARTPQETGSRYSQRAREKGHLPGVLYGPGVDGDKERHLITVERREIEKQMRRLGDSIASTVFDLQLG-QYKQRVLIRDLDRDPGTALPIAVNFLRYRPGYPVEVPVCFVNEDLCLPLKRGGMLLSINRFIRVSCEGETLPEMLMVDMTGVRNNQKVGLERVHFPSNVQPYEVSESFVLGVVKGK 302 A V + + A + +A +Q + + GSR S+R R++G LPGVLYG G +G ER L++ R E R+L SI + VF +Q+G Q +V +RD+ DP T P+AVNFLR++PG V +P+ ++NE+ LKRGG + I + + + +P+ L +D+ G+ KV LE + FP V P V E ++ + G+ Sbjct: 13 AQVARFSAAAAAIQEASSVLQLV-----VREGEGSRASRRLRKQGFLPGVLYGEGENGKDERVLVSFPTRTFEHVHRKLWTSIENQVFQVQVGEQAPVKVYMRDVQLDPVTDAPMAVNFLRFKPGRAVSIPITYLNEESSPGLKRGGFINHIYHSLDCTSFTDEIPKTLQIDVNGLHVGDKVYLEAIKFPEGVVP-NVPEGSLVAKIAGR 216
BLAST of NO09G02400 vs. NCBI_GenBank
Match: XP_008876174.1 (ribosomal protein L25, Ctc-form [Aphanomyces invadans] >ETV95001.1 ribosomal protein L25, Ctc-form [Aphanomyces invadans]) HSP 1 Score: 130.2 bits (326), Expect = 1.200e-26 Identity = 68/184 (36.96%), Postives = 113/184 (61.41%), Query Frame = 0 Query: 121 TPQ-ETGSRYSQRAREKGHLPGVLYGPGVDGDKERHLITVERREIEKQMRRLGDSIASTVFDLQLGQ--YKQRVLIRDLDRDPGTALPIAVNFLRYRPGYPVEVPVCFVNEDLCLPLKRGGMLLSINRFIRVSCEGETLPEMLMVDMTGVRNNQKVGLERVHFPSNVQPYEVSESFVLGVVKGK 302 TP+ + GSR S+R R++G LPG+LYG G++GD R L+++ + + E++ R+L S+ + V+++ G+ +VL+RD P T +P +VNFLRY+PG V +P+ F+N++ LKRGG + ++ I + E +P L VD+ G+ Q++ LE + FP +V P V V+ + GK Sbjct: 30 TPRLKDGSRESRRLRKQGLLPGILYGEGINGDSTRVLVSMNQVDFEREYRKLRTSMGNQVYEVSTGEGGPVTKVLLRDATLHPVTDVPQSVNFLRYKPGRKVHIPLDFLNQESSPGLKRGGYINNVYHEIPCTIASEAIPTKLFVDVNGMHVGQRIYLEDITFPEHVTPL-VKAKAVVATIAGK 212 The following BLAST results are available for this feature:
BLAST of NO09G02400 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO09G02400 ID=NO09G02400|Name=NO09G02400|organism=Nannochloropsis oceanica|type=gene|length=1106bpback to top protein sequence of NO09G02400.1 >NO09G02400.1-protein ID=NO09G02400.1-protein|Name=NO09G02400.1|organism=Nannochloropsis oceanica|type=polypeptide|length=322bpback to top Synonyms
Publications
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