NO09G02330, NO09G02330 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO09G02330 vs. NCBI_GenBank
Match: EWM27528.1 (brca1-associated ring domain protein 1 [Nannochloropsis gaditana]) HSP 1 Score: 299.7 bits (766), Expect = 3.200e-77 Identity = 233/533 (43.71%), Postives = 273/533 (51.22%), Query Frame = 0 Query: 411 PFSVGDTVEVASRSWPGINKEGGVARVTAVH--------FDGEEGGREGRRGVVTYDVKYMLSGSEKRVKGKYITDANVLVNPTGNADAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHFPLGGIGRGELEEGRGGGLGGRSYKENQAPPLQKILISSSXXXXXXXXXXXXXXXXXXXXLSSLPIDPKLGDTYQRHPEGIVILPTSLPHSMLGKLDEFLLRFNCRVTRVPGPDVTHVVARADAKRRAETRTLKYLHGLLQRRWVVGPSWLSDSLLKGKIEREVKYELMGDPKASEPSAPLKARLSRYRRMPLLFQKYDVYFWGDFPPPRPTRKDLESLVVVGGGRLV-----------------KAWVEGGE----GRKCVVICNSVPESGGGREGGMEGGGLPEMLKGE-GTVVVSSDWLLDSISNYRVLGYSKFQVL 914 PF VGDTVEVA+R+WPGINKEGGVAR+ AVH +TYDVKYMLSG EKRVKGKYI+ ANVLV PT A+ XXXXXXXXXXXXXX L + A XXXXXXXXXXXXXXXXXX L DP D+Y+ HP+ IVILPTSLPHS+LG LD F RF+ RVT++PGP VTHV+ARAD +RRAETRT+KYLHG+L RRWV+ PSWL+ SL KGK+E E+++E++GDPKA+EPSAP KARLSRY+++P LF Y V F GDFPPPRPTR+DLESLV GGGR+V EGGE RK V+ICNS+P G ++ G + E G VVSSDWLLDSISNYRV+ +F V+ Sbjct: 53 PFVVGDTVEVAARTWPGINKEGGVARIVAVHGAEXXXXXXXXXXXXXXXXXXXITYDVKYMLSGGEKRVKGKYISSANVLVAPTA-AECRPDGAXXXXXXXXXXXXXXAAWTEHAPPVPAKGGETTEGRVHVHTSRGTVGGGHASPSPFSSRKRPADAMTADAASSPP----------------------------------------------SXXXXXXXXXXXXXSAVLSPLQWALRPALSFXXXXXXXXXXXXXXXXXXXXXXXXXXRRLPEPDPDPADRDSYRTHPQDIVILPTSLPHSLLGSLDAFARRFDARVTKLPGPQVTHVLARADGRRRAETRTIKYLHGILARRWVLAPSWLTGSLAKGKVEAEIRHEIVGDPKATEPSAPTKARLSRYKQIPPLFAAYRVVFGGDFPPPRPTRRDLESLVKAGGGRVVTLAAFXXXXXXXXXXIGHRLTEGGEEGRVTRKTVMICNSLPAKEA--VGAVKSGTMTVSAWAEGGRPVVSSDWLLDSISNYRVMDLKRFAVI 536
BLAST of NO09G02330 vs. NCBI_GenBank
Match: XP_018447192.1 (PREDICTED: BRCA1-associated RING domain protein 1-like [Raphanus sativus] >XP_018447201.1 PREDICTED: BRCA1-associated RING domain protein 1-like [Raphanus sativus]) HSP 1 Score: 94.7 bits (234), Expect = 1.600e-15 Identity = 70/223 (31.39%), Postives = 107/223 (47.98%), Query Frame = 0 Query: 696 IVILPTSLPHSMLGKLDEFLLRFNCRVTRVPGPDVTHVVARADAKRRAETRTLKYLHGLLQRRWVVGPSWLSDSLLKGKIEREVKYELMGDPKASEPSAPLKARLSRYRRMPLLFQKYDVYFWGDFPPPRPTRKDLESLVVVGGGRLVKAWVE---------GGEGRKCVVICNSVPESGGGREGGM----EGGGLPEMLKGE-GTVVVSSDWLLDSISNYRV 905 +VI ++L +++ +FN ++R P VTHV+A D K A TRTLK L G+L +W++ W+ SL + E +E+ D + P ARL P LF YF+GDF + ++DL++LV V GG ++K E G +G VV+ N P G G + + E L + G+ VV WLL+SI+ Y++ Sbjct: 475 LVICGSALSQGDKRLMEKLAAKFNATISRYWNPSVTHVIASTDEK-GACTRTLKVLMGILNGKWIINADWMKASLEASQPVDEEPFEIHIDTQGCH-DGPKTARLRAATNKPKLFDGMKFYFYGDF--FKGYKEDLQNLVKVAGGMILKTEEELSGESINNVGDQGSSPVVVYNIDPPPGCGLGEEVTIIWQRANEAEALSTKTGSRVVGHTWLLESIAGYKL 693
BLAST of NO09G02330 vs. NCBI_GenBank
Match: ORX91892.1 (hypothetical protein K493DRAFT_409078 [Basidiobolus meristosporus CBS 931.73]) HSP 1 Score: 93.6 bits (231), Expect = 3.500e-15 Identity = 69/216 (31.94%), Postives = 103/216 (47.69%), Query Frame = 0 Query: 690 QRHPEGIVILPTSLPHSMLGKLDEFLLRFNCRVTRVPGPDVTHVVARADAKRRAETRTLKYLHGLLQRRWVVGPSWLSDSLLKGKIEREVKYELMGDPKASEPSAPLKARLSRYRRMPLLFQKYDVYFWGDFPPPRPTRKDLESLVVVGGGRLVKAWVEGGEGRKCVVICNSVPESGGGREGGMEGGGLPEMLKGEGTVVVSSDWLLDSISNYRVL 906 Q PE VIL T L S KL+ + + V DVTH+V +A + RT+KY +L RW+V W+ DSL + + E YE++GD S P +AR S ++ P LFQ + G+F +P R DL L+ GG ++ W ++ VIC++ + E E VV ++W+LDSISNY+++ Sbjct: 227 QDPPEMPVILGTMLKASQTKKLNSTAKKLHASVVAEFKKDVTHLV--TEAVKGTSRRTMKYFLAILHGRWLVSYQWVEDSLKRNEWLEEDAYEIIGDEHFSN-YGPRRARQSIKKQEPRLFQGQQYFLAGEF--KQPARDDLIMLLNAGGATVLDRW-PPANNQQVRVICDN-------KTSMRTKNKYREQYSCE---VVFANWVLDSISNYKLI 426
BLAST of NO09G02330 vs. NCBI_GenBank
Match: KFK42745.1 (hypothetical protein AALP_AA1G034300 [Arabis alpina]) HSP 1 Score: 92.8 bits (229), Expect = 5.900e-15 Identity = 70/223 (31.39%), Postives = 111/223 (49.78%), Query Frame = 0 Query: 696 IVILPTSLPHSMLGKLDEFLLRFNCRVTRVPGPDVTHVVARADAKRRAETRTLKYLHGLLQRRWVVGPSWLSDSLLKGKIEREVKYELMGDPKASEPSAPLKARLSRYRRMPLLFQKYDVYFWGDFPPPRPTRKDLESLVVVGGGRLVKAWVEGG---------EGRKCVVICNSVPESGG--GREGGM--EGGGLPEMLKGE-GTVVVSSDWLLDSISNYRV 905 +V ++L S +++ +RF+ ++R P VTHV+A D K A TRTLK L G+L +W+V W+ SL + E +E+ D + + P ARL+ P LF + YF+GDF + ++DL++LV V GG ++ E G + +V+ N P G G E + E E+L + G+ VV WLL+SI+ Y++ Sbjct: 503 LVFCGSALSQSDKRLMEKLAVRFSATISRYWNPSVTHVIASTDEK-GACTRTLKVLMGILNGKWIVNADWMKASLEVSQPVDEEPFEIHIDTQGCQ-DGPKTARLNAATNKPKLFDGFKFYFFGDF--IKGYKEDLQNLVKVAGGTILNTEDELGAESSNNVNDQRSSSIVVYNIDPPVGCALGEEVAIIWERANEAEVLSTKTGSRVVGHTWLLESIAGYKL 721
BLAST of NO09G02330 vs. NCBI_GenBank
Match: KFK42746.1 (hypothetical protein AALP_AA1G034300 [Arabis alpina]) HSP 1 Score: 92.8 bits (229), Expect = 5.900e-15 Identity = 70/223 (31.39%), Postives = 111/223 (49.78%), Query Frame = 0 Query: 696 IVILPTSLPHSMLGKLDEFLLRFNCRVTRVPGPDVTHVVARADAKRRAETRTLKYLHGLLQRRWVVGPSWLSDSLLKGKIEREVKYELMGDPKASEPSAPLKARLSRYRRMPLLFQKYDVYFWGDFPPPRPTRKDLESLVVVGGGRLVKAWVEGG---------EGRKCVVICNSVPESGG--GREGGM--EGGGLPEMLKGE-GTVVVSSDWLLDSISNYRV 905 +V ++L S +++ +RF+ ++R P VTHV+A D K A TRTLK L G+L +W+V W+ SL + E +E+ D + + P ARL+ P LF + YF+GDF + ++DL++LV V GG ++ E G + +V+ N P G G E + E E+L + G+ VV WLL+SI+ Y++ Sbjct: 501 LVFCGSALSQSDKRLMEKLAVRFSATISRYWNPSVTHVIASTDEK-GACTRTLKVLMGILNGKWIVNADWMKASLEVSQPVDEEPFEIHIDTQGCQ-DGPKTARLNAATNKPKLFDGFKFYFFGDF--IKGYKEDLQNLVKVAGGTILNTEDELGAESSNNVNDQRSSSIVVYNIDPPVGCALGEEVAIIWERANEAEVLSTKTGSRVVGHTWLLESIAGYKL 719
BLAST of NO09G02330 vs. NCBI_GenBank
Match: KFK42747.1 (hypothetical protein AALP_AA1G034300 [Arabis alpina]) HSP 1 Score: 92.8 bits (229), Expect = 5.900e-15 Identity = 70/223 (31.39%), Postives = 111/223 (49.78%), Query Frame = 0 Query: 696 IVILPTSLPHSMLGKLDEFLLRFNCRVTRVPGPDVTHVVARADAKRRAETRTLKYLHGLLQRRWVVGPSWLSDSLLKGKIEREVKYELMGDPKASEPSAPLKARLSRYRRMPLLFQKYDVYFWGDFPPPRPTRKDLESLVVVGGGRLVKAWVEGG---------EGRKCVVICNSVPESGG--GREGGM--EGGGLPEMLKGE-GTVVVSSDWLLDSISNYRV 905 +V ++L S +++ +RF+ ++R P VTHV+A D K A TRTLK L G+L +W+V W+ SL + E +E+ D + + P ARL+ P LF + YF+GDF + ++DL++LV V GG ++ E G + +V+ N P G G E + E E+L + G+ VV WLL+SI+ Y++ Sbjct: 502 LVFCGSALSQSDKRLMEKLAVRFSATISRYWNPSVTHVIASTDEK-GACTRTLKVLMGILNGKWIVNADWMKASLEVSQPVDEEPFEIHIDTQGCQ-DGPKTARLNAATNKPKLFDGFKFYFFGDF--IKGYKEDLQNLVKVAGGTILNTEDELGAESSNNVNDQRSSSIVVYNIDPPVGCALGEEVAIIWERANEAEVLSTKTGSRVVGHTWLLESIAGYKL 720
BLAST of NO09G02330 vs. NCBI_GenBank
Match: XP_010475040.1 (PREDICTED: BRCA1-associated RING domain protein 1-like isoform X1 [Camelina sativa]) HSP 1 Score: 92.0 bits (227), Expect = 1.000e-14 Identity = 66/222 (29.73%), Postives = 107/222 (48.20%), Query Frame = 0 Query: 696 IVILPTSLPHSMLGKLDEFLLRFNCRVTRVPGPDVTHVVARADAKRRAETRTLKYLHGLLQRRWVVGPSWLSDSLLKGKIEREVKYELMGDPKASEPSAPLKARLSRYRRMPLLFQKYDVYFWGDFPPPRPTRKDLESLVVVGGGRLVKAWVEGG--------EGRKCVVICNSVPESGG--GREGGM---EGGGLPEMLKGEGTVVVSSDWLLDSISNYRV 905 +V+ ++L S ++ ++FN ++R P+VTHV+A D K A TRTLK L G+L +W++ W+ SL + E +E+ D + + P ARL P LF YF+GDF + ++DL++LV V GG ++ E G + R +V+ N P G G E + + G+ +V WLL+SI+ Y++ Sbjct: 490 LVLCGSALSKSDKNLMESLAVKFNATISRYWNPNVTHVIASTDEK-GACTRTLKVLMGILNGKWIINADWMKASLEASEPVDEEAFEIHLDSQGCQ-DGPKAARLGAASNKPKLFDGLKFYFFGDF--YKGYKEDLQNLVKVAGGTVLNTEDELGAESSNSADDQRSPIVVYNIDPPIGCALGEEVTIIWQRANDAEALASQTGSRLVGHTWLLESIAGYKI 707
BLAST of NO09G02330 vs. NCBI_GenBank
Match: XP_010475041.1 (PREDICTED: BRCA1-associated RING domain protein 1-like isoform X2 [Camelina sativa]) HSP 1 Score: 92.0 bits (227), Expect = 1.000e-14 Identity = 66/222 (29.73%), Postives = 107/222 (48.20%), Query Frame = 0 Query: 696 IVILPTSLPHSMLGKLDEFLLRFNCRVTRVPGPDVTHVVARADAKRRAETRTLKYLHGLLQRRWVVGPSWLSDSLLKGKIEREVKYELMGDPKASEPSAPLKARLSRYRRMPLLFQKYDVYFWGDFPPPRPTRKDLESLVVVGGGRLVKAWVEGG--------EGRKCVVICNSVPESGG--GREGGM---EGGGLPEMLKGEGTVVVSSDWLLDSISNYRV 905 +V+ ++L S ++ ++FN ++R P+VTHV+A D K A TRTLK L G+L +W++ W+ SL + E +E+ D + + P ARL P LF YF+GDF + ++DL++LV V GG ++ E G + R +V+ N P G G E + + G+ +V WLL+SI+ Y++ Sbjct: 489 LVLCGSALSKSDKNLMESLAVKFNATISRYWNPNVTHVIASTDEK-GACTRTLKVLMGILNGKWIINADWMKASLEASEPVDEEAFEIHLDSQGCQ-DGPKAARLGAASNKPKLFDGLKFYFFGDF--YKGYKEDLQNLVKVAGGTVLNTEDELGAESSNSADDQRSPIVVYNIDPPIGCALGEEVTIIWQRANDAEALASQTGSRLVGHTWLLESIAGYKI 706
BLAST of NO09G02330 vs. NCBI_GenBank
Match: EKC24263.1 (BRCA1-associated RING domain protein 1 [Crassostrea gigas]) HSP 1 Score: 91.7 bits (226), Expect = 1.300e-14 Identity = 51/146 (34.93%), Postives = 76/146 (52.05%), Query Frame = 0 Query: 699 LPTSLPHSMLGKLDEFLLRFNCRVTRVPGPDVTHVVARADAKRRAETRTLKYLHGLLQRRWVVGPSWLSDSLLKGKIEREVKYELMGDPKASEPSAPLKARLSRYRRMPLLFQKYDVYFWGDFPPPRPTRKDLESLVVVGGGRLVK 845 L T L L + + RV P+VTHVV+ + + RT+KYL G+L RW+V W+ SL G E +E+ G + A K R++R +++P LF YF+G F P P R+DL SLV +GGG++++ Sbjct: 356 LGTGLSREQRSTLQKCASKLQARVVEGFCPEVTHVVSGCNNEGLC-PRTIKYLQGVLSGRWIVNMEWVEMSLEYGSKLVEEAFEIPGTSTDPQSGAAQKGRINRQKQLPGLFDGCQFYFYGHFEYPTPDREDLVSLVKLGGGQVIQ 500
BLAST of NO09G02330 vs. NCBI_GenBank
Match: XP_010457425.1 (PREDICTED: BRCA1-associated RING domain protein 1-like isoform X1 [Camelina sativa]) HSP 1 Score: 91.7 bits (226), Expect = 1.300e-14 Identity = 66/222 (29.73%), Postives = 107/222 (48.20%), Query Frame = 0 Query: 696 IVILPTSLPHSMLGKLDEFLLRFNCRVTRVPGPDVTHVVARADAKRRAETRTLKYLHGLLQRRWVVGPSWLSDSLLKGKIEREVKYELMGDPKASEPSAPLKARLSRYRRMPLLFQKYDVYFWGDFPPPRPTRKDLESLVVVGGGRLVKAWVEGG--------EGRKCVVICNSVPESGG--GREGGM---EGGGLPEMLKGEGTVVVSSDWLLDSISNYRV 905 +V+ ++L S ++ ++FN ++R P+VTHV+A D K A TRTLK L G+L +W++ W+ SL + E +E+ D + + P ARL P LF YF+GDF + ++DL++LV V GG ++ E G + R +V+ N P G G E + + G+ +V WLL+SI+ Y++ Sbjct: 496 LVLCGSALSKSDKNLMESLAVKFNATISRYWNPNVTHVIASTDEK-GACTRTLKVLMGILNGKWIINADWMKASLEASQPVDEEPFEIHIDSQGCQ-DGPKSARLGAANNKPKLFDGLKFYFFGDF--YQGYKEDLQNLVKVAGGTVLNTEDELGAESSNSADDQRSPIVVYNIDPPIGCALGEEVTIIWQRANDAEALASQTGSRLVGHTWLLESIAGYKL 713 The following BLAST results are available for this feature:
BLAST of NO09G02330 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO09G02330 ID=NO09G02330|Name=NO09G02330|organism=Nannochloropsis oceanica|type=gene|length=3030bpback to top protein sequence of NO09G02330.1 >NO09G02330.1-protein ID=NO09G02330.1-protein|Name=NO09G02330.1|organism=Nannochloropsis oceanica|type=polypeptide|length=922bpback to top Synonyms
Publications
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