NO09G02160, NO09G02160 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO09G02160 vs. NCBI_GenBank
Match: EWM27534.1 (Kinetochore-Ndc80 subunit Spc24 [Nannochloropsis gaditana]) HSP 1 Score: 298.5 bits (763), Expect = 1.600e-77 Identity = 150/201 (74.63%), Postives = 173/201 (86.07%), Query Frame = 0 Query: 1 MPQMSWEETRSIMAEVQELFAGREDMNTVEEIRALQKEMKEAVQSREASAAACIRGLTAEVGVAQAVVDAFPAARDASKAQKAALEGEKEHVSEVLASLTTDIAEARQNVECMEAERIDVEEKAKGVEHASSEQAPRVLHALSLYANITGIRWKYEDDENSHLIRGFVSLPSKDEVREFSLDCNKESTFKVANTIWDMIDP 202 MPQM+WEETRSIM+EVQELFAGRED NT+EEIR LQ+E+KE VQSREA AA CIRGLTAEV V+QA VDA PAA +A K++KAALEGEK E L ++ IA+ RQNVECM E +VEEKAKG+EHAS +QAPRVLHALSLYANITGIRWKY+D E SHLIRGFVSLP K+EVREF+LDC+KES+FK+AN+IW+MIDP Sbjct: 1 MPQMTWEETRSIMSEVQELFAGREDTNTIEEIRELQREIKETVQSREAGAATCIRGLTAEVNVSQAAVDALPAAEEADKSRKAALEGEKGETEEALVAMNKKIADMRQNVECMTVEAEEVEEKAKGIEHASQDQAPRVLHALSLYANITGIRWKYDDGEKSHLIRGFVSLPEKEEVREFTLDCHKESSFKIANSIWNMIDP 201
BLAST of NO09G02160 vs. NCBI_GenBank
Match: GAQ88434.1 (hypothetical protein KFL_004280030 [Klebsormidium nitens]) HSP 1 Score: 77.8 bits (190), Expect = 4.300e-11 Identity = 49/193 (25.39%), Postives = 101/193 (52.33%), Query Frame = 0 Query: 7 EETRSIMAEVQELFAGREDMNTVEEIRALQKEMKEAVQSREASAAACIRGLTAEVGVAQAVVDAFPAARDASKAQKAALEGEKEHVSEVLASLTTDIAEARQNVECMEAERIDVEEKAKGVEHASSEQAPRVLHALSLYANITGIRWKYEDDENSHLIRGFVSLPSKDEVREFSLDCNKESTFKVANTIWDMI 200 EET ++M ++Q +F RED + + +I+ +E + + SRE A + + ++ A++ P A + + A++ E + + L D+ + Q E ++ + +E K K +E + E+ P+ L+ ++L+A+I+ I W +E+ E ++G+++ + ++R F D K S F + N +WD I Sbjct: 7 EETLAVMGDLQRVFESREDADRIVKIQKKCEEAMQLIASRERHMADVLAEMKEQLREAESRATP-PEPESAHEERVDAIKEEARLAWQNIDRLQLDLQQLEQYREGLDEQFKSLEAKRKQLESLAKEEMPKTLYEITLFAHISSITWDFEEKER---VKGYITKIEEGDIRNFDFDTKKISQFDLTNQLWDWI 195
BLAST of NO09G02160 vs. NCBI_GenBank
Match: XP_011396993.1 (hypothetical protein F751_1372 [Auxenochlorella protothecoides] >KFM24107.1 hypothetical protein F751_1372 [Auxenochlorella protothecoides]) HSP 1 Score: 75.1 bits (183), Expect = 2.800e-10 Identity = 53/195 (27.18%), Postives = 102/195 (52.31%), Query Frame = 0 Query: 6 WEETRSIMAEVQELFAGREDMNTVEEIRALQKEMKEAVQSREASAAACIRGLTAEVGVAQAVVDAFPAARDASKAQKAALEGEKEHVSEVLASLTTDIAEARQNVECMEAERIDVEEKAKGVEHASSEQAPRVLHALSLYANITGIRWKYEDDENSHLIRGFVSLPSKDEVREFSLDCNKESTFKVANTIWDMID 201 ++E ++A +++ +A +D +T+ E+ +Q+E++ + SRE + I+ L++ V A+ + +P A A+ LE + +A LTT++ + + + + +V K V+H E PR+ H LSLYA+++ I W++ +N I G VS P K +VR F L + F+ N +W +++ Sbjct: 7 FDEHLGVIAALRDNYARHDDTDTIRELLGIQEELEGLLSSREDTVKQAIQALSSRVEEAR-IKAVYPEEEGAHDARLRELEARVAASKQHVAQLTTELEALGKQRQQLGSSMKEVGLKKAQVDHLLLEDEPRIRHQLSLYAHVSKISWRF---DNPDRIAGTVSDPEKADVRLFDL-APQMPRFEATNQLWRLME 196
BLAST of NO09G02160 vs. NCBI_GenBank
Match: GBG33328.1 (Kinetochore protein Spc24 [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 73.9 bits (180), Expect = 6.200e-10 Identity = 56/192 (29.17%), Postives = 100/192 (52.08%), Query Frame = 0 Query: 10 RSIMAEVQELFAGREDMNTVEEIRALQKEMKEAVQSREASAAACIRGLTAEVGVAQAVVDAFPAARDASKAQKAALEGEKEHVSEVLASLTTDIAEARQNVECMEAERIDVEEKAKGVEHASSEQAPRVLHALSLYANITGIRWKYE-DDENSHLIRGFVSLPSKDEVREFSLDCNKESTFKVANTIWDMID 201 + I+ EV L + ++ VE L +E++E + +AA IR T +V A+ +AF AA+ + + ALE E+ + + L D + V +EA+ EE+ K A + P+++H+LSLY+ I+ I+W E + + +G V P + V++F +D ++ F+VAN +WD+I+ Sbjct: 69 QQILEEVSVLAHEKTELEAVEGAGKLAREVRERYARAKDNAAEAIRKCTQDVTDAREKAEAF-AAQTPTSPEIEALEQERIALLKRLEDANEDQDALLKLVADLEAKVARTEEELKLARQAEDKALPKMMHSLSLYSTISKIKWDLESSNPRKGVFQGTVVNPDEGYVKDFRIDEGSKTPFQVANQLWDIIN 259
BLAST of NO09G02160 vs. NCBI_GenBank
Match: XP_013411178.1 (kinetochore protein Spc24 [Lingula anatina] >XP_013411179.1 kinetochore protein Spc24 [Lingula anatina] >XP_013411180.1 kinetochore protein Spc24 [Lingula anatina]) HSP 1 Score: 71.6 bits (174), Expect = 3.100e-9 Identity = 52/197 (26.40%), Postives = 110/197 (55.84%), Query Frame = 0 Query: 7 EETRSIMAEVQELFAGREDMNTVEEIRALQKEMKEAVQSREASAAACIRGLTAEVGVAQAVVDAFPA--ARDASKAQKAA-LEGEKEHVSEVLASLTTDIAEARQNVECMEAERIDVEEKAKGVEHASSEQAPRVLHALSLYANITGIRWKYEDDENSHLIRGFVSLPSKDEVREFSLDCNKESTFKVANTIWDMID 201 EE RSI++E+ + E++ ++ + ++ + +++E + I L+ + +++V + A D + AA +E ++H S V L T + N+E M++ + DVE K + V+H ++E P++ H ++LY +I+ IRW+Y+ + + I+G+ L +K +V+ FS++ + S F + N +WD+++ Sbjct: 5 EEARSIVSELITVLNQDEELTKLQAAGEIVDKINQLRRAQEEAIRNDIHALSTMIDEEESLVAGSQSDEALDKGMGELAAQMEQAQQHKSHVAQELAT----TKGNIEQMKSLKEDVEAKKEQVKHKTTEALPKLRHDVNLYHSISNIRWQYDCEPDE--IKGY--LCNKHDVKPFSMNSKQNSQFFIVNYLWDLME 193
BLAST of NO09G02160 vs. NCBI_GenBank
Match: XP_015758940.1 (PREDICTED: kinetochore protein Spc24-like [Acropora digitifera]) HSP 1 Score: 70.5 bits (171), Expect = 6.900e-9 Identity = 51/187 (27.27%), Postives = 100/187 (53.48%), Query Frame = 0 Query: 15 EVQELFAGREDMNTVEEIRALQKEMKEAVQSREASAAACIRGLTAEVGVAQAVVDAFPAAR-DASKAQKAALEGEKEHVSEVLASLTTDIAEARQNVECMEAERIDVEEKAKGVEHASSEQAPRVLHALSLYANITGIRWKYEDDENSHLIRGFVSLPSKDEVREFSLDCNKESTFKVANTIWDMID 201 EV + + ED ++E+I E++E E + + L+ + QA + A++ D S + +L+G+K+ ++ + L D+ QN+ E E D++ +A V+ E P+ + SLY NI+ IRW YE +E+ ++GF++ + ++V+ F L+ ++ S + +AN +WD++D Sbjct: 9 EVITVLSNAEDEESLEKIAQNFDEVQEICLQEEGDFSNTLLALSK---ILQAQEEKNKASKLDESSNRMDSLQGDKKTTTQFIEKLEDDVKLLEQNINARENEIQDLQVRAAEVKENQEEVLPKKRYIFSLYTNISHIRWDYECEEDH--VKGFMA--NLNDVKPFCLNKSENSAYDIANRLWDIMD 188
BLAST of NO09G02160 vs. NCBI_GenBank
Match: XP_005651962.1 (hypothetical protein COCSUDRAFT_64220 [Coccomyxa subellipsoidea C-169] >EIE27418.1 hypothetical protein COCSUDRAFT_64220 [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 67.0 bits (162), Expect = 7.600e-8 Identity = 50/198 (25.25%), Postives = 93/198 (46.97%), Query Frame = 0 Query: 3 QMSWEETRSIMAEVQELFAGREDMNTVEEIRALQKEMKEAVQSREASAAACIRGLTAEVGVAQAVV-DAFPAARDASKAQKAALEGEKEHVSEVLASLTTDIAEARQNVECMEAERIDVEEKAKGVEHASSEQAPRVLHALSLYANITGIRWKYEDDENSHLIRGFVSLPSKDEVREFSLDCNKESTFKVANTIWDMI 200 Q + E +++ ++ ++ R+D+N V I+ L+ E+ E RE + A ++ L E +AV+ +A P + A + ++ L + + L + + +++ VE +E PR H LSLY +IT I W +++ N I G V P+ ++R +D + +S F V N+IWD + Sbjct: 6 QERFREHVNVVDALRANYSSRDDLNRVSAIQQLEAELSELCSRRETNVQAVVKELCRETEAVEAVLNEASPPSAHAGRMKE--LLSARTSTHSAVEQLNKEKRFLQDQQTSXXXXXXXXXLRSERVEELVTETEPRTRHELSLYVHITNISWHLQNNHNR--ISGKVHRPATKDIRHIDIDPSDKSQFDVVNSIWDTL 199
BLAST of NO09G02160 vs. NCBI_GenBank
Match: XP_002501061.1 (predicted protein [Micromonas commoda] >ACO62319.1 predicted protein [Micromonas commoda]) HSP 1 Score: 66.6 bits (161), Expect = 9.900e-8 Identity = 49/200 (24.50%), Postives = 96/200 (48.00%), Query Frame = 0 Query: 2 PQMSWEETRSIMAEVQELFAGREDMNTVEEIRALQKEMKEAVQSREASAAACIRGLTAEVGVAQAVVDAFPAARDASKAQK-AALEGEKEHVSEVLASLTTDIAEARQNVECMEAERIDVEEKAKGVEHASSEQAPRVLHALSLYANITGIRWKYEDDENSHLIRGFVSLPSKDEVREFSLDCNKESTFKVANTIWDMID 201 P+ S+ E ++ E++ ++A ED V + KE+++ + REA I+ + VA A A P+ + ++ A +E EK E L + + ++++ +++ K + V+ + PR H LSLYA+I+ I W+YE + I+G V+ +++ S +++AN +W++ID Sbjct: 3 PEASFAECHELIEEMRRIYATDEDALKVRALNQQFKEVRKLCEDREAHMQTVIKEMVKR--VADAEKRATPSESPSEHQKRIAQVEAEKRAAGEFLTHMEAEAQXXXXXXXXLKSQSANLKVKKQEVDAIEMDDVPRAKHELSLYAHISKISWQYETTDR---IKGRVNAHEGKDLQVIDYAVGDRSEYQLANDLWNLID 197
BLAST of NO09G02160 vs. NCBI_GenBank
Match: GAX92840.1 (Hypothetical protein PINS_000738 [Pythium insidiosum]) HSP 1 Score: 66.6 bits (161), Expect = 9.900e-8 Identity = 49/199 (24.62%), Postives = 90/199 (45.23%), Query Frame = 0 Query: 4 MSWEETRSIMAEVQELFA--GREDMNTVEEIRALQKEMKEAVQSREASAAACIRGLTAEVGVAQAVVDAFPAARDASKAQKAALEGEKEHVSEVLASLTTDIAEARQNVECMEAERIDVEEKAKGVEHASSEQAPRVLHALSLYANITGIRWKYEDDENSHLIRGFVSLPSKDEVREFSLDCNKESTFKVANTIWDMID 201 +SW E + I E+++L+ ++D + + +KE+ A Q ++ +A + L V Q + RDA ++ LE K + L L D +++++E + ++A + + R H +SLYA +TGI+W + D I G + +PS + F +D + F+ AN +W ID Sbjct: 32 LSWPEVQEICKELEQLYRKDAQKDAARIRALARKRKEISAACQGKKNTAQQQLNQLLGSVRDWQEQSSSAKTRRDALSSKLQELEALKREMVAQLERLRVDEQSSKESLEQLLDTYESTRQEALKFQMEHRNEVDRAKHFMSLYAAVTGIKWDFSGDS----IAGEIHVPSTQNIVPFEIDPANSNEFETANALWTKID 226
BLAST of NO09G02160 vs. NCBI_GenBank
Match: XP_015758941.1 (PREDICTED: kinetochore protein Spc24-like [Acropora digitifera]) HSP 1 Score: 65.1 bits (157), Expect = 2.900e-7 Identity = 46/186 (24.73%), Postives = 97/186 (52.15%), Query Frame = 0 Query: 15 EVQELFAGREDMNTVEEIRALQKEMKEAVQSREASAAACIRGLTAEVGVAQAVVDAFPAARDASKAQKAALEGEKEHVSEVLASLTTDIAEARQNVECMEAERIDVEEKAKGVEHASSEQAPRVLHALSLYANITGIRWKYEDDENSHLIRGFVSLPSKDEVREFSLDCNKESTFKVANTIWDMID 201 EV + + ED ++E+I E++E E + + L+ + + + A + D S + +L+ +K+ ++ + + D+ +N+ E E D++ +A V+ E P+ + SLY NI+ IRW YE +E+ ++GF++ + ++V+ F L+ ++ S + +AN +WD++D Sbjct: 9 EVITVLSNAEDEESLEKIAQNFDEVQEIRLQEEGDFSNTLLALSKILQAQEVKIKA--SKLDESSNRMNSLQDDKKTTTQFIEKIEDDVKLLEENINAKENEIQDLQVRAAEVKENQEEVLPKKRYIFSLYTNISHIRWDYECEEDH--VKGFMA--NLNDVKPFCLNKSENSAYDIANRLWDIMD 188 The following BLAST results are available for this feature:
BLAST of NO09G02160 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 11
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO09G02160 ID=NO09G02160|Name=NO09G02160|organism=Nannochloropsis oceanica|type=gene|length=1162bpback to top protein sequence of NO09G02160.1 >NO09G02160.1-protein ID=NO09G02160.1-protein|Name=NO09G02160.1|organism=Nannochloropsis oceanica|type=polypeptide|length=202bpback to top Synonyms
Publications
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